assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002234515.1_ASM223451v1	NZ_CP022489	Salmonella enterica subsp. enterica serovar Mbandaka strain SA20026234 chromosome, complete genome	1	125522-126832	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no		WYL,csa3,cas3,DEDDh,DinG,RT,PD-DExK	Orphan	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	1	1	125735-125766	NZ_CP022489.1_624790-624821	I-E:I-E:I-E	20,21,21	21	Orphan	WYL,csa3,cas3,DEDDh,DinG,RT,PD-DExK	NA,NA	NA|179aa|up_9|NZ_CP022489.1_114068_114605_-	PRK15260, PRK15260, fimbrial protein SteF; Provisional	NA|157aa|up_8|NZ_CP022489.1_114601_115072_-	PRK15276, PRK15276, putative fimbrial subunit SteE; Provisional	NA|169aa|up_7|NZ_CP022489.1_115086_115593_-	PRK15275, PRK15275, putative fimbrial protein SteD; Provisional	NA|258aa|up_6|NZ_CP022489.1_115612_116386_-	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional	NA|900aa|up_5|NZ_CP022489.1_116398_119098_-	PRK15273, PRK15273, fimbrial biogenesis outer membrane usher protein	NA|196aa|up_4|NZ_CP022489.1_119177_119765_-	PRK15261, PRK15261, fimbrial protein SteA; Provisional	NA|267aa|up_3|NZ_CP022489.1_120371_121172_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_2|NZ_CP022489.1_121399_123037_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_1|NZ_CP022489.1_123119_124418_+	PRK00077, eno, enolase; Provisional	NA|224aa|up_0|NZ_CP022489.1_124553_125225_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|266aa|down_0|NZ_CP022489.1_126929_127727_+	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only]	NA|121aa|down_1|NZ_CP022489.1_127816_128179_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|600aa|down_2|NZ_CP022489.1_128614_130414_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|571aa|down_3|NZ_CP022489.1_130413_132126_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|down_4|NZ_CP022489.1_132201_132936_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|318aa|down_5|NZ_CP022489.1_133148_134102_-	PRK15379, PRK15379, type III secretion system effector SopD	NA|349aa|down_6|NZ_CP022489.1_137308_138355_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_7|NZ_CP022489.1_138605_139514_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|480aa|down_8|NZ_CP022489.1_139523_140963_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_9|NZ_CP022489.1_140949_141555_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional
GCF_002234515.1_ASM223451v1	NZ_CP022489	Salmonella enterica subsp. enterica serovar Mbandaka strain SA20026234 chromosome, complete genome	2	136595-137294	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no		WYL,csa3,cas3,DEDDh,DinG,RT,PD-DExK	Orphan	GTGTTCCCCGCGCCAGCGGGGATAAACC,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	28,29,29	0	0	NA	NA	I-E:I-E:I-E	11,11,11	11	Orphan	WYL,csa3,cas3,DEDDh,DinG,RT,PD-DExK	NA,NA	NA|267aa|up_9|NZ_CP022489.1_120371_121172_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_8|NZ_CP022489.1_121399_123037_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_7|NZ_CP022489.1_123119_124418_+	PRK00077, eno, enolase; Provisional	NA|224aa|up_6|NZ_CP022489.1_124553_125225_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|266aa|up_5|NZ_CP022489.1_126929_127727_+	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only]	NA|121aa|up_4|NZ_CP022489.1_127816_128179_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|600aa|up_3|NZ_CP022489.1_128614_130414_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|571aa|up_2|NZ_CP022489.1_130413_132126_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_1|NZ_CP022489.1_132201_132936_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|318aa|up_0|NZ_CP022489.1_133148_134102_-	PRK15379, PRK15379, type III secretion system effector SopD	NA|349aa|down_0|NZ_CP022489.1_137308_138355_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP022489.1_138605_139514_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|480aa|down_2|NZ_CP022489.1_139523_140963_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP022489.1_140949_141555_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|119aa|down_4|NZ_CP022489.1_141572_141929_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP022489.1_142119_142431_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP022489.1_142449_143160_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP022489.1_143159_143639_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP022489.1_143635_144685_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP022489.1_144665_145427_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_002234515.1_ASM223451v1	NZ_CP022489	Salmonella enterica subsp. enterica serovar Mbandaka strain SA20026234 chromosome, complete genome	3	649653-649759	3	CRISPRCasFinder	no		WYL,csa3,cas3,DEDDh,DinG,RT,PD-DExK	Orphan	ATTGTCCAACGGTTGTCCAACAGTTGTCCA	30	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,cas3,DEDDh,DinG,RT,PD-DExK	NA|92aa|up_7|NZ_CP022489.1_644730_645006_-,NA|157aa|up_6|NZ_CP022489.1_645095_645566_-,NA|150aa|up_5|NZ_CP022489.1_645644_646094_-,NA|102aa|up_4|NZ_CP022489.1_646424_646730_-,NA|123aa|up_3|NZ_CP022489.1_647305_647674_-,NA|134aa|down_4|NZ_CP022489.1_653012_653414_+	NA|95aa|up_9|NZ_CP022489.1_643484_643769_-	pfam08281, Sigma70_r4_2, Sigma-70, region 4	NA|236aa|up_8|NZ_CP022489.1_643768_644476_-	COG4712, COG4712, Uncharacterized protein conserved in bacteria [Function unknown]	NA|92aa|up_7|NZ_CP022489.1_644730_645006_-	NA	NA|157aa|up_6|NZ_CP022489.1_645095_645566_-	NA	NA|150aa|up_5|NZ_CP022489.1_645644_646094_-	NA	NA|102aa|up_4|NZ_CP022489.1_646424_646730_-	NA	NA|123aa|up_3|NZ_CP022489.1_647305_647674_-	NA	NA|239aa|up_2|NZ_CP022489.1_647691_648408_-	COG1974, LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) [Transcription / Signal transduction mechanisms]	NA|65aa|up_1|NZ_CP022489.1_648514_648709_+	pfam09048, Cro, Cro	NA|93aa|up_0|NZ_CP022489.1_648817_649096_+	pfam05269, Phage_CII, Bacteriophage CII protein	NA|479aa|down_0|NZ_CP022489.1_650158_651595_+	TIGR03600, phage_DnaB, phage replicative helicase, DnaB family, HK022 subfamily	NA|147aa|down_1|NZ_CP022489.1_651872_652313_+	pfam05772, NinB, NinB protein	NA|176aa|down_2|NZ_CP022489.1_652309_652837_+	TIGR01712, DNA_N-6-adenine-methyltransferase_M	NA|59aa|down_3|NZ_CP022489.1_652833_653010_+	pfam05322, NinE, NINE Protein	NA|134aa|down_4|NZ_CP022489.1_653012_653414_+	NA	NA|59aa|down_5|NZ_CP022489.1_653406_653583_+	pfam05810, NinF, NinF protein	NA|204aa|down_6|NZ_CP022489.1_653575_654187_+	pfam05766, NinG, Bacteriophage Lambda NinG protein	NA|224aa|down_7|NZ_CP022489.1_654183_654855_+	cd07424, MPP_PrpA_PrpB, PrpA and PrpB, metallophosphatase domain	NA|173aa|down_8|NZ_CP022489.1_654845_655364_+	pfam06530, Phage_antitermQ, Phage antitermination protein Q	NA|108aa|down_9|NZ_CP022489.1_655872_656196_+	TIGR01594, Uncharacterized_protein_HI_1416, phage holin, lambda family
