assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002285775.1_ASM228577v1	NZ_CP023139	Lactobacillus delbrueckii subsp. lactis strain KCTC 3034 chromosome, complete genome	1	339506-339600	1	CRISPRCasFinder	no	c2c9_V-U4,cas14j	cas14j,c2c9_V-U4,cas3,DEDDh,Cas14u_CAS-V,cas8c,cas7,cas4,cas1,cas2,DinG,cas14k,csa3	Unclear	AGGCCAGCTCTAAGTCGGCGGCT	23	0	0	NA	NA	NA	1	1	TypeV	cas14j,c2c9_V-U4,cas3,DEDDh,Cas14u_CAS-V,cas8c,cas7,cas4,cas1,cas2,DinG,cas14k,csa3	NA,NA	NA|465aa|up_9|NZ_CP023139.1_328122_329517_-	PRK11387, PRK11387, S-methylmethionine permease	NA|311aa|up_8|NZ_CP023139.1_329594_330527_+	PRK09485, mmuM, homocysteine methyltransferase; Provisional	NA|154aa|up_7|NZ_CP023139.1_330582_331044_+	cd04333, ProX_deacylase, This CD, composed mainly of bacterial single-domain proteins, includes the Thermus thermophilus (Tt) YbaK-like protein, a homolog of the trans-acting Escherichia coli YbaK Cys-tRNA(Pro) deacylase and the Agrobacterium tumefaciens  ProX Ala-tRNA(Pro) deacylase and also the cis-acting prolyl-tRNA synthetase-editing domain (ProRS-INS)	NA|149aa|up_6|NZ_CP023139.1_331405_331852_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|341aa|up_5|NZ_CP023139.1_331833_332856_+	cd08963, L-asparaginase_I, Type I (cytosolic) bacterial L-asparaginase	NA|277aa|up_4|NZ_CP023139.1_332972_333803_+	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase	NA|159aa|up_3|NZ_CP023139.1_333888_334365_+	pfam01741, MscL, Large-conductance mechanosensitive channel, MscL	NA|478aa|up_2|NZ_CP023139.1_334444_335878_-	PRK09243, PRK09243, nicotinate phosphoribosyltransferase; Validated	NA|185aa|up_1|NZ_CP023139.1_335946_336501_-	cd00431, cysteine_hydrolases, Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle	NA|350aa|up_0|NZ_CP023139.1_336710_337760_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|89aa|down_0|NZ_CP023139.1_340225_340492_-	pfam06961, DUF1294, Protein of unknown function (DUF1294)	NA|257aa|down_1|NZ_CP023139.1_340588_341359_-	COG1051, COG1051, ADP-ribose pyrophosphatase [Nucleotide transport and metabolism]	NA|61aa|down_2|NZ_CP023139.1_341534_341717_+	pfam04604, L_biotic_typeA, Type-A lantibiotic	NA|393aa|down_3|NZ_CP023139.1_341754_342933_-	pfam00872, Transposase_mut, Transposase, Mutator family	c2c9_V-U4|276aa|down_4|NZ_CP023139.1_343350_344178_+	pfam12323, HTH_OrfB_IS605, Helix-turn-helix domain	cas14j|137aa|down_5|NZ_CP023139.1_344237_344648_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|96aa|down_6|NZ_CP023139.1_344917_345205_+	pfam08951, EntA_Immun, Enterocin A Immunity	NA|207aa|down_7|NZ_CP023139.1_346354_346975_-	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]	NA|267aa|down_8|NZ_CP023139.1_346976_347777_-	TIGR01247, drrB, daunorubicin resistance ABC transporter membrane protein	NA|237aa|down_9|NZ_CP023139.1_347773_348484_-	COG1121, ZnuC, ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
GCF_002285775.1_ASM228577v1	NZ_CP023139	Lactobacillus delbrueckii subsp. lactis strain KCTC 3034 chromosome, complete genome	2	916173-917015	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8c,cas7,cas4,cas1,cas2	cas14j,c2c9_V-U4,cas3,DEDDh,Cas14u_CAS-V,cas8c,cas7,cas4,cas1,cas2,DinG,cas14k,csa3	 Type I-U?,Type I-U,Type I-C	GTCGCATCCCGCATGGGATGCGTGGATTGAAAT,GTCGCATCCCGCATGGGATGCGTGGATTGAAAT,GTCGCATCCCGCATGGGATGCGTGGATTGAAAT	33,33,33	0	0	NA	NA	NA:NA:NA	11,12,12	12	TypeI-U?,TypeI-U,TypeI-C	cas14j,c2c9_V-U4,cas3,DEDDh,Cas14u_CAS-V,cas8c,cas7,cas4,cas1,cas2,DinG,cas14k,csa3	NA,NA	NA|203aa|up_9|NZ_CP023139.1_903975_904584_+	COG2357, COG2357, PpGpp synthetase catalytic domain [General function prediction only]	NA|223aa|up_8|NZ_CP023139.1_904586_905255_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|420aa|up_7|NZ_CP023139.1_905257_906517_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	cas3|811aa|up_6|NZ_CP023139.1_906564_908997_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|393aa|up_5|NZ_CP023139.1_909597_910776_+	pfam00872, Transposase_mut, Transposase, Mutator family	cas8c|625aa|up_4|NZ_CP023139.1_911259_913134_+	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas7|285aa|up_3|NZ_CP023139.1_913153_914008_+	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas4|220aa|up_2|NZ_CP023139.1_914012_914672_+	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas1|344aa|up_1|NZ_CP023139.1_914668_915700_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|97aa|up_0|NZ_CP023139.1_915713_916004_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|367aa|down_0|NZ_CP023139.1_917212_918313_+	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine	NA|409aa|down_1|NZ_CP023139.1_918314_919541_+	cd00644, HMG-CoA_reductase_classII, Class II hydroxymethylglutaryl-coenzyme A (HMG-CoA) reductase (HMGR)	NA|388aa|down_2|NZ_CP023139.1_919544_920708_+	TIGR01835, 3-hydroxy-3-methylglutaryl_CoA_synthase, 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade	NA|453aa|down_3|NZ_CP023139.1_920871_922230_+	pfam06738, ThrE, Putative threonine/serine exporter	NA|169aa|down_4|NZ_CP023139.1_922286_922793_-	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins	NA|315aa|down_5|NZ_CP023139.1_922855_923800_+	PRK00517, prmA, 50S ribosomal protein L11 methyltransferase	NA|754aa|down_6|NZ_CP023139.1_923940_926202_+	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription]	NA|146aa|down_7|NZ_CP023139.1_926230_926668_+	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional	NA|429aa|down_8|NZ_CP023139.1_926952_928239_+	TIGR00442, hisS, histidyl-tRNA synthetase	NA|615aa|down_9|NZ_CP023139.1_928254_930099_+	PRK00476, aspS, aspartyl-tRNA synthetase; Validated
GCF_002285775.1_ASM228577v1	NZ_CP023139	Lactobacillus delbrueckii subsp. lactis strain KCTC 3034 chromosome, complete genome	3	1315616-1315719	3	CRISPRCasFinder	no	csa3	cas14j,c2c9_V-U4,cas3,DEDDh,Cas14u_CAS-V,cas8c,cas7,cas4,cas1,cas2,DinG,cas14k,csa3	Type I-A	CCGCTGCCCCCGCACTTGTCACAGGT	26	0	0	NA	NA	NA	1	1	Orphan	cas14j,c2c9_V-U4,cas3,DEDDh,Cas14u_CAS-V,cas8c,cas7,cas4,cas1,cas2,DinG,cas14k,csa3	NA,NA	NA|448aa|up_9|NZ_CP023139.1_1301388_1302732_+	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|316aa|up_8|NZ_CP023139.1_1304731_1305679_+	PRK09379, PRK09379, LytR family transcriptional regulator	NA|378aa|up_7|NZ_CP023139.1_1305787_1306921_-	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|342aa|up_6|NZ_CP023139.1_1307037_1308063_-	PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional	NA|296aa|up_5|NZ_CP023139.1_1308264_1309152_-	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	csa3|101aa|up_4|NZ_CP023139.1_1309263_1309566_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|176aa|up_3|NZ_CP023139.1_1309645_1310173_-	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional	NA|759aa|up_2|NZ_CP023139.1_1310162_1312439_-	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ	NA|234aa|up_1|NZ_CP023139.1_1312435_1313137_-	cd06165, Sortase_A, Sortase domain found in class A sortases	NA|613aa|up_0|NZ_CP023139.1_1313117_1314956_-	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|615aa|down_0|NZ_CP023139.1_1316299_1318144_-	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|200aa|down_1|NZ_CP023139.1_1318205_1318805_-	PRK14162, PRK14162, heat shock protein GrpE; Provisional	NA|348aa|down_2|NZ_CP023139.1_1318816_1319860_-	PRK00082, hrcA, heat-inducible transcription repressor; Provisional	NA|314aa|down_3|NZ_CP023139.1_1319995_1320937_-	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase	NA|198aa|down_4|NZ_CP023139.1_1321050_1321644_-	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|139aa|down_5|NZ_CP023139.1_1323151_1323568_-	pfam14659, Phage_int_SAM_3, Phage integrase, N-terminal SAM-like domain	NA|408aa|down_6|NZ_CP023139.1_1325220_1326444_-	pfam01548, DEDD_Tnp_IS110, Transposase	NA|393aa|down_7|NZ_CP023139.1_1326687_1327866_-	pfam00872, Transposase_mut, Transposase, Mutator family	NA|421aa|down_8|NZ_CP023139.1_1328077_1329340_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|393aa|down_9|NZ_CP023139.1_1330238_1331417_+	pfam00872, Transposase_mut, Transposase, Mutator family
GCF_002285775.1_ASM228577v1	NZ_CP023139	Lactobacillus delbrueckii subsp. lactis strain KCTC 3034 chromosome, complete genome	4	1945857-1946312	2	CRT	no		cas14j,c2c9_V-U4,cas3,DEDDh,Cas14u_CAS-V,cas8c,cas7,cas4,cas1,cas2,DinG,cas14k,csa3	Orphan	NTTCTTGGNNGCCTTCTT	18	0	0	NA	NA	NA	10	10	Orphan	cas14j,c2c9_V-U4,cas3,DEDDh,Cas14u_CAS-V,cas8c,cas7,cas4,cas1,cas2,DinG,cas14k,csa3	NA|99aa|up_3|NZ_CP023139.1_1942275_1942572_-,NA|62aa|down_1|NZ_CP023139.1_1949001_1949187_+,NA|61aa|down_5|NZ_CP023139.1_1953819_1954002_+	NA|393aa|up_9|NZ_CP023139.1_1930403_1931582_-	pfam00872, Transposase_mut, Transposase, Mutator family	NA|372aa|up_8|NZ_CP023139.1_1932239_1933355_-	COG0562, Glf, UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane]	NA|345aa|up_7|NZ_CP023139.1_1933497_1934532_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|327aa|up_6|NZ_CP023139.1_1934861_1935842_-	PRK09379, PRK09379, LytR family transcriptional regulator	NA|410aa|up_5|NZ_CP023139.1_1936081_1937311_-	PRK09379, PRK09379, LytR family transcriptional regulator	NA|296aa|up_4|NZ_CP023139.1_1941072_1941960_+	pfam13930, Endonuclea_NS_2, DNA/RNA non-specific endonuclease	NA|99aa|up_3|NZ_CP023139.1_1942275_1942572_-	NA	NA|123aa|up_2|NZ_CP023139.1_1942823_1943192_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|338aa|up_1|NZ_CP023139.1_1943326_1944340_-	PRK00094, gpsA, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA|104aa|up_0|NZ_CP023139.1_1945190_1945502_+	cd00130, PAS, PAS domain; PAS motifs appear in archaea, eubacteria and eukarya	NA|393aa|down_0|NZ_CP023139.1_1946898_1948077_+	pfam00872, Transposase_mut, Transposase, Mutator family	NA|62aa|down_1|NZ_CP023139.1_1949001_1949187_+	NA	NA|625aa|down_2|NZ_CP023139.1_1949245_1951120_-	TIGR01995, beta-glucosides_PTS_EIIBCA, PTS system, beta-glucoside-specific IIABC component	NA|236aa|down_3|NZ_CP023139.1_1951333_1952041_+	TIGR02404, Trehalose_operon_transcriptional_repressor, trehalose operon repressor, B	NA|551aa|down_4|NZ_CP023139.1_1952051_1953704_+	TIGR02403, Trehalose-6-phosphate_hydrolase, alpha,alpha-phosphotrehalase	NA|61aa|down_5|NZ_CP023139.1_1953819_1954002_+	NA	NA|116aa|down_6|NZ_CP023139.1_1953994_1954342_+	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|78aa|down_7|NZ_CP023139.1_1954397_1954631_+	pfam13007, LZ_Tnp_IS66, Transposase C of IS166 homeodomain	NA|448aa|down_8|NZ_CP023139.1_1954587_1955931_+	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|421aa|down_9|NZ_CP023139.1_1956078_1957341_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed
