The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP016962	Bordetella pertussis strain E898, complete genome	4103239	0	70036	4103239	tRNA,transposase	Natrialba_phage(12.5%)	60	NA	NA
WP_010929569.1|0_1920_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
WP_003806878.1|1916_2609_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA	NA
WP_003806879.1|2605_3403_+	ParA family protein	NA	Q8JL10	Natrialba_phage	34.9	5.6e-20
WP_010929570.1|3409_4171_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010929571.1|4214_5132_+	ParB/RepB/Spo0J family partition protein	NA	I3NLC2	Bifidobacterium_phage	38.1	1.9e-16
WP_003806883.1|6721_7912_+	elongation factor Tu	NA	A0A1V0SLW6	Klosneuvirus	29.2	3.1e-14
WP_003806884.1|8150_8531_+	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
WP_003806885.1|8540_9074_+	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	30.5	1.4e-11
WP_010929572.1|9137_9569_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
WP_003806887.1|9571_10270_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
WP_003806888.1|10512_11037_+	50S ribosomal protein L10	NA	NA	NA	NA	NA
WP_003806889.1|11118_11502_+	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
WP_010929573.1|11661_15774_+	DNA-directed RNA polymerase subunit beta	NA	A0A0N9R0J7	Chrysochromulina_ericina_virus	28.8	2.4e-21
WP_003818292.1|15773_20018_+	DNA-directed RNA polymerase subunit beta'	NA	A0A2I7QNZ7	Vibrio_phage	24.7	3.5e-68
WP_010929574.1|20126_20531_-	TssQ family T6SS-associated lipoprotein	NA	NA	NA	NA	NA
WP_010929575.1|20771_21947_+	membrane protein	NA	NA	NA	NA	NA
WP_010929576.1|24352_25459_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
WP_003818297.1|26470_27286_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_010930363.1|27282_28233_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995007.1|28314_28650_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929578.1|28674_29109_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929579.1|29141_30368_-	thiolase family protein	NA	NA	NA	NA	NA
WP_010929580.1|30364_30862_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_010929581.1|31069_31978_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023995008.1|32163_33006_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929583.1|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010929584.1|34625_35576_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814398.1|35572_36763_-	MFS transporter	NA	NA	NA	NA	NA
WP_003814400.1|36949_37924_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_010929586.1|37925_40064_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003814404.1|40060_40600_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_003814405.1|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929587.1|41318_42212_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247766.1|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_003814412.1|42687_43218_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
WP_023852754.1|43346_43646_-	DUF1974 domain-containing protein	NA	NA	NA	NA	NA
WP_010929588.1|43663_44614_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003815267.1|45113_45749_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815265.1|45720_45957_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815255.1|46084_46978_+	membrane protein	NA	NA	NA	NA	NA
WP_010929590.1|48147_49395_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003817748.1|49391_50006_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
WP_010929591.1|50141_51092_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443813.1|51134_52391_+	muropeptide transporter	NA	NA	NA	NA	NA
WP_010929592.1|53622_54357_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_019247224.1|54362_54953_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
WP_003817737.1|54977_55667_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_023852650.1|55663_56425_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010929594.1|56504_57404_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|57497_58448_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929595.1|59248_60475_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_010929596.1|60474_60894_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929597.1|61077_62019_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929598.1|62442_63279_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929599.1|63473_64055_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_019248465.1|64067_64385_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_029443770.1|64488_65547_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_019247832.1|65581_66853_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010929603.1|67482_68664_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929584.1|69085_70036_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP016962	Bordetella pertussis strain E898, complete genome	4103239	77634	136108	4103239	tRNA,transposase	Planktothrix_phage(22.22%)	54	NA	NA
WP_010929591.1|77634_78585_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166334.1|78659_79604_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929608.1|79600_81475_-	polysaccharide biosynthesis protein	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
WP_003807102.1|82822_83527_-	DUF2837 family protein	NA	NA	NA	NA	NA
WP_003807104.1|83523_84630_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010929610.1|84891_85485_-	sugar transferase	NA	NA	NA	NA	NA
WP_023853419.1|85481_86669_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	NA	NA	NA	NA
WP_010929612.1|86731_87991_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010929613.1|88014_89103_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
WP_010929614.1|89110_90211_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
WP_003807114.1|90214_90790_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_003807115.1|90793_91846_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_010929615.1|91976_92984_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
WP_010929616.1|92985_94272_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
WP_003807124.1|94288_94444_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929617.1|94468_95272_-	type III pantothenate kinase	NA	NA	NA	NA	NA
WP_010929618.1|95268_96135_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_076879533.1|96203_97340_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003807131.1|97339_98179_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
WP_010929620.1|99111_99714_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929621.1|99743_100397_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003807138.1|100529_101786_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	6.2e-66
WP_019248163.1|101788_102733_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_003818417.1|102808_103084_+	YbeD family protein	NA	NA	NA	NA	NA
WP_010929623.1|103091_103754_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA	NA
WP_003807146.1|103815_104817_+	lipoyl synthase	NA	NA	NA	NA	NA
WP_003807148.1|104831_105380_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.4	3.7e-47
WP_010929624.1|105437_106334_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_010929625.1|106330_107392_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
WP_010929626.1|107427_108378_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929627.1|109277_110471_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_010929628.1|110552_111182_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
WP_010927242.1|111243_111927_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_023853376.1|111936_113619_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003815933.1|113906_114254_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
WP_003815930.1|114344_114662_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|114944_115961_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815929.1|116036_116837_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003815927.1|116833_117709_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010929633.1|117719_119012_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929634.1|119054_120095_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
WP_010929635.1|120200_121022_-	phosphodiesterase	NA	NA	NA	NA	NA
WP_005012067.1|121122_122073_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905488.1|122171_123077_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.7	9.8e-21
WP_003815918.1|123073_123907_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010929637.1|124743_125754_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_019247800.1|125750_126140_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010929638.1|127033_128287_+	amidase	NA	NA	NA	NA	NA
WP_010929639.1|128377_130078_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_010929640.1|130504_131152_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853393.1|131150_132590_+	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_003815905.1|132682_132985_+	bacterioferritin-associated ferredoxin	NA	NA	NA	NA	NA
WP_010929512.1|133012_133891_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|135157_136108_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP016962	Bordetella pertussis strain E898, complete genome	4103239	164894	225405	4103239	protease,tRNA,transposase	Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)	52	NA	NA
WP_005015810.1|164894_165845_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929659.1|167288_168191_-	YgcG family protein	NA	NA	NA	NA	NA
WP_003815889.1|168168_168798_-	LemA family protein	NA	NA	NA	NA	NA
WP_029443820.1|169128_170511_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.5	5.3e-42
WP_010929661.1|170544_171174_+	LysE family transporter	NA	NA	NA	NA	NA
WP_003815895.1|171222_172830_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
WP_010929663.1|172854_173538_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815898.1|173619_174096_-	bacterioferritin	NA	NA	NA	NA	NA
WP_077068973.1|174136_174316_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|174302_175253_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929664.1|176368_176896_+	META domain-containing protein	NA	NA	NA	NA	NA
WP_010929665.1|176987_177803_+	META and DUF4377 domain-containing protein	NA	NA	NA	NA	NA
WP_003808370.1|177863_178598_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_010929666.1|178635_180714_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
WP_003808374.1|180963_181236_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014486043.1|181334_182423_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010929668.1|182426_184331_+	BamA/TamA family outer membrane protein	NA	NA	NA	NA	NA
WP_014486044.1|184327_188002_+	DUF490 domain-containing protein	NA	NA	NA	NA	NA
WP_010929670.1|188062_188626_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
WP_003808385.1|188633_189056_-	glyoxalase	NA	NA	NA	NA	NA
WP_010929671.1|189083_189503_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_077274090.1|189531_189978_-	GNAT family N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	29.4	1.2e-08
WP_003808391.1|190104_190602_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003808393.1|190756_193027_+	arginine/lysine/ornithine decarboxylase	NA	NA	NA	NA	NA
WP_010929672.1|193075_194308_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010929591.1|194406_195357_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879535.1|195402_196095_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.4e-83
WP_019248671.1|196091_196985_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_010929675.1|197379_198480_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_010929676.1|198561_198936_+	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_010929677.1|198995_201860_+	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
WP_010929678.1|202004_202745_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929679.1|202814_204026_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929680.1|204054_205023_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005013747.1|205636_206587_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929699.1|206743_207067_+	phosphate starvation-inducible protein	NA	NA	NA	NA	NA
WP_010929698.1|207171_208221_-	cyclase	NA	NA	NA	NA	NA
WP_003819081.1|208217_209042_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
WP_003807672.1|209042_209339_-	YciI family protein	NA	NA	NA	NA	NA
WP_003807674.1|209364_209640_-	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
WP_003819086.1|209696_210341_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010929696.1|210340_211027_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010929695.1|211156_212008_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929694.1|212058_212784_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929693.1|212815_214165_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929692.1|214276_215209_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_033446404.1|215666_218462_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
WP_010929690.1|219055_221998_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_010929689.1|222069_222789_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_010929688.1|222827_223376_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929687.1|223530_224430_+	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_005012808.1|224454_225405_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP016962	Bordetella pertussis strain E898, complete genome	4103239	233337	286925	4103239	protease,tRNA,transposase	Bacillus_phage(25.0%)	49	NA	NA
WP_005012067.1|233337_234288_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|234374_235325_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|235321_236272_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_157737557.1|236258_236432_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929700.1|236370_237168_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003814363.1|238117_238528_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA	NA
WP_003814358.1|239549_240293_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814356.1|240336_241380_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814355.1|241550_243653_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_003814351.1|245063_246020_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929701.1|246038_246530_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_010929702.1|246526_247882_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
WP_010929703.1|247882_248581_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_010929704.1|248577_249279_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
WP_003814339.1|249531_250581_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
WP_003814337.1|250686_251628_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_010929705.1|251624_253514_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
WP_003814332.1|253600_254239_+	membrane protein	NA	NA	NA	NA	NA
WP_019247543.1|254381_255767_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.5e-17
WP_010929706.1|255697_256234_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_010929707.1|256385_257777_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_010929708.1|257793_258774_-	AEC family transporter	NA	NA	NA	NA	NA
WP_003814324.1|258909_259893_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
WP_010929709.1|259957_260857_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814321.1|260963_262718_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_010929710.1|262725_263850_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929711.1|263863_264844_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|265574_266525_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929712.1|267084_267630_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929713.1|267713_269333_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_004567834.1|269348_270503_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_003817696.1|270516_270642_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_010929714.1|270638_272390_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
WP_010929715.1|272386_274066_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
WP_085964336.1|274101_274677_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.4e-28
WP_010929717.1|275819_276098_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|277141_278092_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077068974.1|278078_278294_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929718.1|278369_278531_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_010929719.1|278538_278679_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815821.1|279197_279647_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
WP_003815819.1|279656_280268_-	stringent starvation protein A	NA	NA	NA	NA	NA
WP_019247426.1|280426_281281_-	cytochrome c1	NA	NA	NA	NA	NA
WP_003815816.1|281300_282683_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_003815815.1|282747_283389_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_010929721.1|283528_283987_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_010927226.1|284011_284788_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_014906092.1|284841_285978_+|protease	trypsin-like serine protease	protease	W5SAB9	Pithovirus	31.2	1.2e-07
WP_005015810.1|285974_286925_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP016962	Bordetella pertussis strain E898, complete genome	4103239	390858	448367	4103239	transposase	Orpheovirus(14.29%)	52	NA	NA
WP_005012067.1|390858_391809_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154219862.1|391795_391963_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010927231.1|391945_392863_+	reductase	NA	NA	NA	NA	NA
WP_003815842.1|392859_393108_+	glutaredoxin family protein	NA	NA	NA	NA	NA
WP_003815840.1|393104_394310_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486045.1|394382_395378_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486046.1|395400_396621_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486047.1|396617_397262_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248476.1|398992_399802_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014906040.1|400019_401060_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	42.5	6.1e-59
WP_023994705.1|401028_401172_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486049.1|401158_402142_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486050.1|402068_402770_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486051.1|402818_403589_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003819219.1|403585_404827_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486052.1|404931_406638_-	thiamine pyrophosphate-requiring protein	NA	NA	NA	NA	NA
WP_014486053.1|406634_407531_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486054.1|407571_409161_-	sulfurtransferase	NA	NA	NA	NA	NA
WP_003807867.1|409210_410203_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807865.1|410271_410871_-	hypothetical protein	NA	NA	NA	NA	NA
WP_076879611.1|411331_412309_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929577.1|412387_413338_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122777.1|413426_414341_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929782.1|414337_414997_+	LysE family translocator	NA	NA	NA	NA	NA
WP_003814709.1|415086_416010_+	alpha/beta fold hydrolase	NA	A0A1C9C5K3	Heterosigma_akashiwo_virus	27.2	4.8e-07
WP_010929783.1|416015_416471_-	multidrug/biocide efflux PACE transporter	NA	NA	NA	NA	NA
WP_010929784.1|416467_417571_-	ChbG/HpnK family deacetylase	NA	NA	NA	NA	NA
WP_157734656.1|417529_417799_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010927086.1|417758_419378_-	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_003814720.1|419374_420433_-	glycosyltransferase family 2 protein	NA	I1TED8	Salmonella_phage	40.5	2.8e-59
WP_033446199.1|420562_421057_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_022997984.1|421149_422127_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929785.1|422322_423528_+	sodium/glutamate symporter	NA	NA	NA	NA	NA
WP_010929786.1|423524_425036_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_003814726.1|425051_426365_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_003814728.1|426555_426735_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814730.1|427144_427879_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
WP_010929577.1|430323_431274_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247421.1|431405_431804_-	GTP-binding protein	NA	E4ZFJ7	Streptococcus_phage	44.3	9.0e-19
WP_003814701.1|432214_432685_-	universal stress protein	NA	NA	NA	NA	NA
WP_003820700.1|432773_433118_-	TIGR01244 family phosphatase	NA	NA	NA	NA	NA
WP_010929788.1|433217_434618_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010929789.1|436406_436925_-	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	38.9	2.1e-12
WP_003814694.1|437035_437791_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	40.8	2.9e-42
WP_003814691.1|437986_439219_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929791.1|439211_439997_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_003814685.1|440063_441035_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003814681.1|441045_442023_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247419.1|442148_443321_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010929793.1|443347_444376_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003814674.1|444441_445635_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_005012067.1|447416_448367_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
NZ_CP016962	Bordetella pertussis strain E898, complete genome	4103239	590421	651611	4103239	protease,transposase	uncultured_Mediterranean_phage(40.0%)	57	NA	NA
WP_005013747.1|590421_591372_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446133.1|591847_592738_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_010931496.1|592734_593556_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_019247235.1|593754_594246_+	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_019247236.1|594264_595338_+	CHAD domain-containing protein	NA	NA	NA	NA	NA
WP_023853086.1|595384_596488_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
WP_003808577.1|596563_597184_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_003808574.1|597204_597714_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	42.1	1.2e-28
WP_003808570.1|597768_598020_+	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	53.4	1.6e-18
WP_010931494.1|598083_599217_+	benzoate/H(+) symporter BenE family transporter	NA	NA	NA	NA	NA
WP_003808567.1|599224_599611_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931493.1|599607_602127_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003808563.1|602555_602894_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003808562.1|602890_603397_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_010931492.1|603458_604259_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931491.1|604369_605311_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931490.1|605404_606940_-	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931489.1|608619_610470_-	dipeptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.2	1.6e-17
WP_003808549.1|610473_611307_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931488.1|611306_612248_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003808546.1|612499_613495_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931486.1|613612_615901_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003808542.1|616207_617116_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010931485.1|617170_618136_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931484.1|618210_619872_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_023853074.1|619868_620654_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_154698388.1|620620_620785_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|620802_621753_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814152.1|622451_622835_+	membrane protein	NA	NA	NA	NA	NA
WP_010927005.1|622892_623495_+	DUF2946 family protein	NA	NA	NA	NA	NA
WP_003820995.1|623512_623914_-	DoxX family protein	NA	NA	NA	NA	NA
WP_003814158.1|624047_624941_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931481.1|624937_625519_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_003814165.1|626313_627048_+	arginyltransferase	NA	NA	NA	NA	NA
WP_010931480.1|627088_628138_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_003814172.1|628285_628864_-	TIGR01841 family phasin	NA	NA	NA	NA	NA
WP_010931479.1|629250_630228_+	tripartite tricarboxylate transporter substrate binding protein BugD	NA	NA	NA	NA	NA
WP_010931478.1|630321_634716_-	dermonecrotic toxin	NA	NA	NA	NA	NA
WP_003814178.1|634916_635765_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931477.1|635923_636736_-	competence/damage-inducible protein A	NA	NA	NA	NA	NA
WP_005015810.1|636791_637742_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154219861.1|637728_637893_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931453.1|637840_638641_-	EI24 domain-containing protein	NA	NA	NA	NA	NA
WP_003814185.1|638702_639086_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_010931454.1|639097_640531_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	1.5e-52
WP_003814188.1|640737_641067_-	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_003814191.1|641069_641738_-	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010931456.1|642001_642922_+	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_003814195.1|642968_643181_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931457.1|643203_643626_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931458.1|643642_644743_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010931459.1|644839_646357_-|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_003814203.1|646432_647272_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_003814205.1|647293_648175_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814206.1|648256_649351_-	porin	NA	NA	NA	NA	NA
WP_076879617.1|649644_650595_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166340.1|650669_651611_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 7
NZ_CP016962	Bordetella pertussis strain E898, complete genome	4103239	656929	703126	4103239	terminase,tail,tRNA,transposase	uncultured_Caudovirales_phage(17.39%)	53	NA	NA
WP_003814219.1|656929_657961_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814221.1|658001_658241_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931464.1|658310_659900_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_010931465.1|659899_660448_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_003814226.1|660528_661101_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010927008.1|661119_662031_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814230.1|662104_663073_-	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010931466.1|663195_664269_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_010931467.1|664273_666094_-	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_010930800.1|666170_667121_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995786.1|667107_667269_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446132.1|667209_667545_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_003819076.1|667678_668329_+	carbonic anhydrase	NA	NA	NA	NA	NA
WP_010931468.1|668350_669769_-	amidase	NA	NA	NA	NA	NA
WP_019248554.1|669838_670594_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247734.1|670562_671321_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931471.1|671331_672213_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931472.1|672229_672937_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931473.1|672939_673698_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931474.1|673907_675650_+	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010925795.1|675642_676167_+	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931475.1|676206_677001_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248926.1|677168_678242_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|678340_679291_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931452.1|679542_679755_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931451.1|679820_680432_-	S24 family peptidase	NA	NA	NA	NA	NA
WP_010931450.1|680911_681232_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931449.1|681224_681923_-	membrane protein	NA	NA	NA	NA	NA
WP_023853183.1|681937_682159_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|682176_683127_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931448.1|683802_684252_+|terminase	terminase	terminase	C7U0W1	Enterobacteria_phage	61.5	5.2e-39
WP_010931447.1|684238_685516_+|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_010931446.1|685518_686937_+	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931445.1|686965_688021_+	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931444.1|688026_688269_+	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931443.1|688391_688994_+	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_005012808.1|689422_690373_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853024.1|690390_691038_+	hypothetical protein	NA	R9TJ64	Synechococcus_phage	71.1	2.7e-65
WP_010931442.1|691047_691299_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|691361_691844_+	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_010931440.1|691845_692046_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931439.1|692045_692441_+	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_010931438.1|692437_692836_+	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931437.1|692832_693255_+	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_010931436.1|693262_693763_+	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931435.1|694017_694536_+	hypothetical protein	NA	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_003813412.1|694545_694875_+	hypothetical protein	NA	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931434.1|694892_695183_+	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_010931433.1|695208_697821_+|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931432.1|697830_698190_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931431.1|698257_698791_+	DUF1833 family protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931430.1|698787_699177_+	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931429.1|699169_703126_+	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
>prophage 8
NZ_CP016962	Bordetella pertussis strain E898, complete genome	4103239	709292	763222	4103239	tRNA,transposase	Planktothrix_phage(50.0%)	49	NA	NA
WP_003814636.1|709292_711023_+|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
WP_010931419.1|711075_711504_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814641.1|711506_712187_+	protein TolQ	NA	NA	NA	NA	NA
WP_003814643.1|712186_712645_+	protein TolR	NA	NA	NA	NA	NA
WP_010931418.1|712681_713656_+	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_010931417.1|713672_714989_+	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_003814650.1|715020_715518_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_003814652.1|715604_716294_+	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_010931416.1|716293_717343_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003814657.1|717339_718134_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
WP_019247923.1|718302_718653_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247922.1|718628_719186_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_076879618.1|720110_720329_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929584.1|720315_721266_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814416.1|723544_724633_+	spore maturation protein	NA	NA	NA	NA	NA
WP_003814419.1|724635_726078_-	pyruvate kinase	NA	NA	NA	NA	NA
WP_010931414.1|726182_727328_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
WP_010931413.1|727359_728157_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010931412.1|728181_729741_-	chaperone SurA	NA	NA	NA	NA	NA
WP_010931411.1|729737_732110_-	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_010931410.1|732219_733323_+	phosphotransferase	NA	NA	NA	NA	NA
WP_010931409.1|733322_734015_+	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_003814436.1|734158_734860_+	membrane protein	NA	NA	NA	NA	NA
WP_003814437.1|734844_735222_-	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_005012067.1|735953_736904_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852750.1|736890_737034_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814441.1|737063_737936_-	oxaloacetate decarboxylase	NA	NA	NA	NA	NA
WP_003814443.1|738276_738495_+	DUF1059 domain-containing protein	NA	NA	NA	NA	NA
WP_019247242.1|738534_739914_-	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_010929976.1|739955_741353_-	amidase family protein	NA	NA	NA	NA	NA
WP_010927038.1|741392_743045_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.8	6.0e-16
WP_010929977.1|743048_743933_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929978.1|743932_744874_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929979.1|744952_746572_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929980.1|746738_747554_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814459.1|747621_748191_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|748191_749142_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814461.1|749796_750894_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
WP_003814462.1|750927_752193_+	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929591.1|752350_753301_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929982.1|753544_754135_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_010929983.1|754150_756595_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_003814467.1|756714_757686_-	FecR family protein	NA	NA	NA	NA	NA
WP_023852739.1|757817_758342_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_005012067.1|758301_759252_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929984.1|759473_761669_-	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
WP_020699729.1|761741_762149_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_077068980.1|762096_762285_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|762271_763222_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_CP016962	Bordetella pertussis strain E898, complete genome	4103239	885811	940378	4103239	transposase	Acidithiobacillus_phage(33.33%)	48	NA	NA
WP_023994644.1|885811_886828_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003813988.1|887024_888008_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930019.1|889606_890995_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003813991.1|891025_892015_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813992.1|892125_893358_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003813993.1|893639_894440_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930018.1|894462_896694_-	BCCT family transporter	NA	NA	NA	NA	NA
WP_010930017.1|897481_897928_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_003813996.1|897949_898696_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_003813997.1|898839_899817_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
WP_010930016.1|900450_901062_+	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
WP_003813999.1|901055_902273_-	threonine ammonia-lyase	NA	NA	NA	NA	NA
WP_005013747.1|902413_903364_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814000.1|903360_904080_-	lipoprotein	NA	NA	NA	NA	NA
WP_003821234.1|904200_906360_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_003814002.1|906450_906720_-	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_005019401.1|906808_907015_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814003.1|907013_907541_+	lipoprotein	NA	NA	NA	NA	NA
WP_003814004.1|907559_908339_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930015.1|908506_909523_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_003814006.1|909595_910087_-	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_003814007.1|910097_911813_-	acetolactate synthase 3 catalytic subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	30.3	3.1e-60
WP_005012067.1|912976_913927_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248601.1|913923_915774_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
WP_010930052.1|916154_916814_+	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
WP_010930053.1|916901_917054_+	vir-repressed protein	NA	NA	NA	NA	NA
WP_003809770.1|917162_917330_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930054.1|917341_918022_-	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
WP_010930055.1|918303_919020_+	flagellar brake protein	NA	NA	NA	NA	NA
WP_010930056.1|919034_920336_-	phospholipase	NA	NA	NA	NA	NA
WP_029444137.1|922480_925369_+	HD domain-containing protein	NA	NA	NA	NA	NA
WP_010930057.1|925592_926945_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_004568140.1|926973_927495_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_003819989.1|927491_928946_+	carboxylase	NA	NA	NA	NA	NA
WP_023852826.1|928980_929229_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247557.1|929334_930210_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010930060.1|930235_931291_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930061.1|931303_932095_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930062.1|932127_933498_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_023995501.1|934550_934688_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|934674_935625_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930064.1|935677_935899_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810832.1|936058_936271_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810835.1|936390_937509_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_003810837.1|937605_937821_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810839.1|938014_938266_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930066.1|938378_939329_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|939427_940378_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP016962	Bordetella pertussis strain E898, complete genome	4103239	953885	1026371	4103239	transposase	Bacillus_virus(16.67%)	58	NA	NA
WP_005012067.1|953885_954836_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930088.1|954832_955807_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003821497.1|955931_956843_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
WP_004566317.1|957119_957512_-	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
WP_124740670.1|957400_957655_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|957641_958592_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930090.1|958621_958804_-	type II toxin-antitoxin system HicA family toxin	NA	A0A1L2JY37	Aeribacillus_phage	56.1	3.7e-12
WP_010930091.1|959576_960758_-	MFS transporter	NA	NA	NA	NA	NA
WP_010930092.1|960973_961651_-	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_077274086.1|961647_962421_-	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA	NA	NA	NA	NA
WP_010930094.1|962498_963080_-	OmpA family protein	NA	NA	NA	NA	NA
WP_010930095.1|963450_966132_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	3.2e-104
WP_010930096.1|966131_967265_+	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	44.0	6.4e-78
WP_010930097.1|967257_968343_+	prephenate dehydratase	NA	NA	NA	NA	NA
WP_010930098.1|968429_969329_+	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010930099.1|969325_970654_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_010930100.1|970668_971340_+	(d)CMP kinase	NA	NA	NA	NA	NA
WP_003821510.1|971512_973243_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_010930102.1|973244_973604_+	integration host factor subunit beta	NA	NA	NA	NA	NA
WP_010930103.1|973795_974110_+	DUF1049 domain-containing protein	NA	NA	NA	NA	NA
WP_010930104.1|974152_975373_+	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
WP_010930105.1|975369_976311_+	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	A0A2H4N7X4	Lake_Baikal_phage	28.1	1.5e-16
WP_003821513.1|976307_977297_+	ADP-glyceromanno-heptose 6-epimerase	NA	E3SJ87	Synechococcus_phage	34.4	2.2e-26
WP_033446303.1|977331_977916_+	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|978014_978965_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486062.1|979045_979957_+	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	38.8	8.0e-47
WP_010930108.1|980017_981163_-	lytic murein transglycosylase B	NA	NA	NA	NA	NA
WP_003821521.1|981182_982097_+	histone deacetylase family protein	NA	A0A2K9KZC4	Tupanvirus	34.7	9.8e-45
WP_010930110.1|982168_982918_+	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
WP_010930111.1|982917_983847_+	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA	NA
WP_003821527.1|984090_985917_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003813333.1|985999_986641_+	peroxiredoxin	NA	NA	NA	NA	NA
WP_003821528.1|986830_987865_+	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930112.1|989701_990766_+	sulfate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.3	3.8e-24
WP_010930113.1|991563_992472_+	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA	NA
WP_023852693.1|993959_995234_+	PA0069 family radical SAM protein	NA	NA	NA	NA	NA
WP_023852686.1|995387_995768_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014905652.1|995775_996648_-	EamA family transporter	NA	NA	NA	NA	NA
WP_003813315.1|996953_997334_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_003813314.1|997544_998270_+	CoA pyrophosphatase	NA	NA	NA	NA	NA
WP_005012067.1|998365_999316_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930118.1|999420_1000470_+	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
WP_010929632.1|1000607_1001624_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010926548.1|1003132_1003705_-	chorismate lyase	NA	NA	NA	NA	NA
WP_010930119.1|1003764_1004496_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_029443805.1|1004547_1005465_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486063.1|1009440_1010823_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010930123.1|1010892_1011144_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_023853098.1|1011289_1011940_-	SCO family protein	NA	NA	NA	NA	NA
WP_019248379.1|1012090_1014205_-	M3 family metallopeptidase	NA	NA	NA	NA	NA
WP_003811948.1|1014280_1015132_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
WP_010930126.1|1015128_1015755_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003817147.1|1015751_1017506_-	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_010930127.1|1017798_1020504_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_010930128.1|1020516_1022178_+	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
WP_010930129.1|1022190_1023981_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
WP_003817151.1|1024202_1025378_-	FliC/FljB family flagellin	NA	NA	NA	NA	NA
WP_010929584.1|1025420_1026371_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 11
NZ_CP016962	Bordetella pertussis strain E898, complete genome	4103239	1037978	1086916	4103239	holin,tRNA,transposase	uncultured_Mediterranean_phage(37.5%)	46	NA	NA
WP_023853531.1|1037978_1039112_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994624.1|1039204_1039357_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930138.1|1039388_1039937_-	diguanylate cyclase	NA	NA	NA	NA	NA
WP_003819814.1|1039955_1040441_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930139.1|1040618_1041557_+	DnaJ domain-containing protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
WP_003809467.1|1041559_1041877_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247197.1|1041922_1042867_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010930141.1|1044547_1045198_+	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
WP_003809479.1|1045251_1045587_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930142.1|1045583_1046444_+	M23 family metallopeptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
WP_003819817.1|1046460_1046742_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003809486.1|1046815_1047079_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_005012067.1|1047322_1048273_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811933.1|1048571_1049309_-	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
WP_010930143.1|1049744_1050068_+	flagellar transcriptional regulator FlhD	NA	NA	NA	NA	NA
WP_003811929.1|1050102_1050663_+	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
WP_003811927.1|1050783_1051659_+	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
WP_003817154.1|1051671_1052619_+	flagellar motor protein MotB	NA	NA	NA	NA	NA
WP_019247393.1|1052720_1053014_+	response regulator	NA	NA	NA	NA	NA
WP_010930144.1|1053040_1055098_+	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_003811919.1|1055112_1055613_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_010930145.1|1055686_1057393_+	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
WP_010930146.1|1058256_1059309_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
WP_003811911.1|1059361_1059751_+	chemotaxis protein CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
WP_003817162.1|1059759_1060392_+	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_010931363.1|1060491_1061508_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003819773.1|1062338_1063346_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_014486064.1|1063342_1064986_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_023995116.1|1064982_1065885_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003809396.1|1066010_1066484_-	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_010930151.1|1066473_1067496_-	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
WP_015041211.1|1067492_1068920_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010931363.1|1069857_1070874_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003809411.1|1071206_1072142_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.5	3.0e-41
WP_010930154.1|1072191_1074072_-	protein translocase subunit SecD	NA	NA	NA	NA	NA
WP_003809416.1|1074138_1074483_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.4	1.0e-10
WP_010930155.1|1074627_1075764_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
WP_023853534.1|1075760_1076834_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_003809423.1|1076991_1078428_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_010930157.1|1078518_1079160_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_023853536.1|1079495_1080512_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_019248433.1|1080844_1083592_+	pertactin autotransporter	NA	NA	NA	NA	NA
WP_010930160.1|1083658_1085080_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_003809431.1|1085343_1086060_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003809432.1|1086144_1086462_+	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003819794.1|1086502_1086916_+|holin	phage holin family protein	holin	NA	NA	NA	NA
>prophage 12
NZ_CP016962	Bordetella pertussis strain E898, complete genome	4103239	1095984	1158523	4103239	tRNA,transposase	Planktothrix_phage(18.18%)	51	NA	NA
WP_005013747.1|1095984_1096935_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154698393.1|1096952_1097090_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930167.1|1097302_1098079_-	phosphate ABC transporter ATP-binding protein PstB	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
WP_003809638.1|1098123_1098981_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_010930169.1|1099002_1100019_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_014486066.1|1100153_1101194_-	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
WP_010930171.1|1101388_1103470_-	polyphosphate kinase 1	NA	NA	NA	NA	NA
WP_010930172.1|1103705_1105199_+	exopolyphosphatase	NA	NA	NA	NA	NA
WP_003809629.1|1105429_1106224_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003819875.1|1106444_1107803_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_010930173.1|1107799_1108642_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
WP_010930174.1|1108660_1110547_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
WP_010930175.1|1110784_1111417_-	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
WP_003809618.1|1111435_1112038_+	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
WP_157737558.1|1112041_1112203_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1112189_1113140_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930177.1|1113942_1114743_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812707.1|1114786_1115773_-	homoserine kinase	NA	NA	NA	NA	NA
WP_010930178.1|1115912_1116926_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_005012067.1|1116922_1117873_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_155120815.1|1117890_1118031_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003812703.1|1117985_1118444_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003812701.1|1118480_1119794_-	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_010930180.1|1119811_1120183_+	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
WP_019248549.1|1120179_1121643_+	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
WP_003812697.1|1121735_1122512_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_076879621.1|1122493_1125373_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010929591.1|1125555_1126506_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930184.1|1126673_1127498_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
WP_010930185.1|1127497_1128376_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930186.1|1129280_1130396_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930187.1|1130403_1131219_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.7	7.5e-12
WP_010930188.1|1131215_1133081_+	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
WP_003812436.1|1133159_1133792_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930189.1|1133788_1134091_-	membrane protein	NA	NA	NA	NA	NA
WP_010930190.1|1134133_1135654_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
WP_010926447.1|1135660_1136416_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010926448.1|1136445_1137550_-	peptide chain release factor 2	NA	NA	NA	NA	NA
WP_010930191.1|1137652_1139353_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.3	1.3e-50
WP_010930192.1|1139334_1140312_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247537.1|1140321_1141602_+	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_003812422.1|1141594_1142290_+	lipoprotein-releasing ABC transporter ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	38.6	7.0e-35
WP_010928340.1|1142323_1143151_+	TatD family hydrolase	NA	NA	NA	NA	NA
WP_010930194.1|1143432_1146663_+	autotransporter SphB3	NA	NA	NA	NA	NA
WP_010930195.1|1146931_1147108_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930196.1|1147398_1151325_+	inverse autotransporter beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_023853221.1|1153224_1155021_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248398.1|1155020_1155989_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816844.1|1156058_1156904_+	PHP domain-containing protein	NA	NA	NA	NA	NA
WP_003812405.1|1156971_1157526_+	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_010930198.1|1157572_1158523_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP016962	Bordetella pertussis strain E898, complete genome	4103239	1381373	1447873	4103239	transposase	uncultured_Caudovirales_phage(40.0%)	56	NA	NA
WP_010930208.1|1381373_1382324_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811361.1|1382389_1382569_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930309.1|1382685_1383408_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010930310.1|1383427_1384573_-	DUF3182 family protein	NA	NA	NA	NA	NA
WP_010930208.1|1385480_1386431_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811370.1|1386618_1387821_-	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_003811372.1|1387817_1388576_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811375.1|1388969_1389602_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930311.1|1390557_1393158_+	BP1344/BB2830 family autotransporter	NA	NA	NA	NA	NA
WP_010930312.1|1393145_1396565_-	TM0106 family RecB-like putative nuclease	NA	NA	NA	NA	NA
WP_010930313.1|1396572_1397478_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811381.1|1397616_1398195_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930314.1|1398191_1399103_+	CoA ester lyase	NA	NA	NA	NA	NA
WP_010930315.1|1399116_1399797_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930316.1|1399998_1402038_+	acetyl-CoA synthetase	NA	NA	NA	NA	NA
WP_014486069.1|1402056_1403043_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930317.1|1403068_1403866_+	citryl-CoA lyase	NA	NA	NA	NA	NA
WP_003811389.1|1403862_1405056_+	CoA transferase	NA	NA	NA	NA	NA
WP_003811391.1|1405052_1406015_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811393.1|1406032_1407073_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811396.1|1407060_1407669_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_010930318.1|1409257_1410253_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811400.1|1410272_1411451_+	mandelate racemase/muconate lactonizing enzyme family protein	NA	NA	NA	NA	NA
WP_003811401.1|1411461_1412379_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
WP_010930208.1|1412434_1413385_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812022.1|1413483_1414254_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.1	9.8e-30
WP_003812020.1|1414250_1414931_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930319.1|1414997_1415786_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931363.1|1416032_1417049_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930321.1|1417354_1418509_+	flagellar type III secretion system protein FlhB	NA	NA	NA	NA	NA
WP_003817170.1|1423014_1423497_-	flagellar protein FlgN	NA	NA	NA	NA	NA
WP_003817172.1|1423514_1423805_-	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA	NA
WP_010930322.1|1423931_1424642_-	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA	NA
WP_010930323.1|1424825_1425233_+	flagellar basal body rod protein FlgB	NA	NA	NA	NA	NA
WP_003817176.1|1425245_1425665_+	flagellar basal body rod protein FlgC	NA	NA	NA	NA	NA
WP_010930324.1|1425712_1426417_+	flagellar basal body rod modification protein FlgD	NA	NA	NA	NA	NA
WP_003817180.1|1426482_1427904_+	flagellar hook-basal body complex protein	NA	NA	NA	NA	NA
WP_003817181.1|1427942_1428707_+	flagellar basal body rod protein FlgF	NA	NA	NA	NA	NA
WP_010930325.1|1428750_1429536_+	flagellar basal-body rod protein FlgG	NA	NA	NA	NA	NA
WP_010930326.1|1429535_1430225_+	flagellar basal body L-ring protein FlgH	NA	NA	NA	NA	NA
WP_010930327.1|1430227_1431361_+	flagellar basal body P-ring protein FlgI	NA	NA	NA	NA	NA
WP_010930328.1|1431378_1432401_+	flagellar assembly peptidoglycan hydrolase FlgJ	NA	A0A088F6W1	Sulfitobacter_phage	31.4	1.9e-12
WP_010930329.1|1432470_1434117_+	flagellar hook-associated protein FlgK	NA	NA	NA	NA	NA
WP_010930330.1|1434150_1435683_+	flagellar hook-associated protein 3	NA	NA	NA	NA	NA
WP_095586261.1|1435761_1437582_+	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	45.3	1.7e-08
WP_010930332.1|1437702_1439322_+	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	45.3	1.5e-08
WP_014486070.1|1439500_1440943_+	PAS domain-containing protein	NA	A0A1B0V854	Salmonella_phage	41.8	1.0e-35
WP_010929632.1|1441159_1442176_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930333.1|1442222_1443011_-	flagellar biosynthetic protein FliR	NA	NA	NA	NA	NA
WP_003811859.1|1443033_1443303_-	flagellar biosynthesis protein FliQ	NA	NA	NA	NA	NA
WP_015041547.1|1443319_1444111_-	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA	NA
WP_003811855.1|1444122_1444464_-	flagellar biosynthetic protein FliO	NA	NA	NA	NA	NA
WP_010930335.1|1444474_1444975_-	flagellar motor switch protein FliN	NA	NA	NA	NA	NA
WP_003811852.1|1444967_1445978_-	flagellar motor switch protein FliM	NA	NA	NA	NA	NA
WP_003811850.1|1445980_1446553_-	flagellar basal body-associated protein FliL	NA	NA	NA	NA	NA
WP_005012067.1|1446922_1447873_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_CP016962	Bordetella pertussis strain E898, complete genome	4103239	1476044	1514634	4103239	protease,transposase	Emiliania_huxleyi_virus(14.29%)	36	NA	NA
WP_010930352.1|1476044_1477379_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_010930353.1|1477431_1479768_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
WP_003811782.1|1479893_1480457_+	OmpH family outer membrane protein	NA	NA	NA	NA	NA
WP_010930354.1|1480465_1481557_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
WP_003811776.1|1481628_1482084_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA	NA
WP_010930355.1|1482084_1482879_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
WP_010930356.1|1482875_1484057_+	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
WP_003811770.1|1484043_1484649_+	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	40.2	8.8e-26
WP_003811768.1|1484645_1485419_+	RNA methyltransferase	NA	NA	NA	NA	NA
WP_010930357.1|1485430_1486258_-	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
WP_010930358.1|1486419_1488783_+	phosphoenolpyruvate synthase	NA	A0A1V0SGR7	Hokovirus	35.9	2.2e-165
WP_010930359.1|1488850_1489570_-	glutamine amidotransferase	NA	NA	NA	NA	NA
WP_003811761.1|1489693_1490119_+	membrane protein	NA	NA	NA	NA	NA
WP_005012067.1|1490153_1491104_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811759.1|1491221_1492148_+	paraslipin	NA	NA	NA	NA	NA
WP_010930360.1|1492213_1493371_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
WP_003811754.1|1493351_1493819_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
WP_010930800.1|1493966_1494917_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811752.1|1494933_1495368_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_003811750.1|1495357_1495708_+	RnfH family protein	NA	NA	NA	NA	NA
WP_003811748.1|1495904_1497059_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003811746.1|1497055_1498228_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003811743.1|1498275_1499169_+	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003811741.1|1499214_1499652_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_010930362.1|1499711_1500401_+	VIT family protein	NA	NA	NA	NA	NA
WP_010930363.1|1500410_1501361_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879624.1|1501459_1502410_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003819864.1|1502508_1503492_-	transaldolase	NA	H6WFR1	Cyanophage	29.2	5.9e-11
WP_010930365.1|1503754_1504852_+	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.2	5.3e-53
WP_010930366.1|1504862_1508105_+	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_003809593.1|1509126_1509771_-	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_010930367.1|1509781_1510681_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003809599.1|1510728_1511814_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	6.4e-27
WP_010930368.1|1511810_1513505_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_023996304.1|1513538_1513697_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|1513683_1514634_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP016962	Bordetella pertussis strain E898, complete genome	4103239	1794975	1842990	4103239	tRNA,transposase	Moraxella_phage(16.67%)	44	NA	NA
WP_010930522.1|1794975_1795926_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930804.1|1796024_1798625_-	TRAP transporter fused permease subunit	NA	NA	NA	NA	NA
WP_003818658.1|1798731_1799736_-	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010930803.1|1799844_1801185_-	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	22.8	8.8e-18
WP_003818661.1|1801225_1802254_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930802.1|1802449_1802995_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930801.1|1802991_1803552_+	diaminobutyrate acetyltransferase	NA	NA	NA	NA	NA
WP_010930048.1|1803650_1804601_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930523.1|1804638_1805226_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	35.8	4.7e-16
WP_003811007.1|1805243_1805627_-	thioredoxin family protein	NA	V9SJ74	Achromobacter_phage	25.8	8.1e-09
WP_003811011.1|1806986_1808279_-	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	36.0	1.7e-66
WP_010930524.1|1808413_1809454_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	51.3	6.1e-91
WP_010929632.1|1809551_1810568_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003811015.1|1810835_1811483_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_010930526.1|1811608_1812367_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.2	1.4e-68
WP_077274094.1|1812441_1813131_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	46.9	4.2e-32
WP_003811022.1|1813148_1814033_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A292GJG6	Xanthomonas_phage	49.5	4.6e-15
WP_019248494.1|1814029_1814809_+	3'-5' exonuclease	NA	NA	NA	NA	NA
WP_003816527.1|1814835_1815513_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930529.1|1815801_1816554_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003816525.1|1816672_1818073_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	26.5	7.3e-31
WP_003816523.1|1818096_1818495_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003811035.1|1818670_1818871_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_010930530.1|1819009_1819738_+	redoxin family protein	NA	A0A1D8KSL1	Synechococcus_phage	56.8	9.6e-43
WP_003816520.1|1819871_1821287_+	dihydrolipoyl dehydrogenase	NA	NA	NA	NA	NA
WP_003816518.1|1821290_1822154_-	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
WP_004568486.1|1822166_1822916_-	glycerophosphodiester phosphodiesterase	NA	A0A2H4PGQ5	Escherichia_phage	27.8	1.5e-14
WP_019247881.1|1823098_1825114_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
WP_029443816.1|1825095_1825644_-	arylesterase	NA	NA	NA	NA	NA
WP_077274081.1|1825720_1826440_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.6	1.4e-22
WP_005012067.1|1826538_1827489_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|1827587_1828538_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003813572.1|1828686_1829025_-	BON domain-containing protein	NA	NA	NA	NA	NA
WP_003813570.1|1829082_1829244_-	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
WP_003813568.1|1829275_1829476_-	CsbD family protein	NA	NA	NA	NA	NA
WP_010930533.1|1829741_1832315_-	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_010930534.1|1832385_1834959_-	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_010930535.1|1837485_1837974_+	DUF1854 domain-containing protein	NA	NA	NA	NA	NA
WP_029443743.1|1838065_1839217_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_004566336.1|1839270_1840092_+	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_010930537.1|1840130_1841360_+	lytic murein transglycosylase	NA	NA	NA	NA	NA
WP_004566334.1|1841488_1841929_+	DUF937 domain-containing protein	NA	NA	NA	NA	NA
WP_076879558.1|1841873_1842053_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929584.1|1842039_1842990_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
NZ_CP016962	Bordetella pertussis strain E898, complete genome	4103239	1904551	1963821	4103239	protease,tRNA,transposase	Klosneuvirus(40.0%)	52	NA	NA
WP_005013747.1|1904551_1905502_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930573.1|1905626_1906436_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_153302779.1|1906491_1906650_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929577.1|1906636_1907587_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930574.1|1908860_1910078_+	four-carbon acid sugar kinase family protein	NA	NA	NA	NA	NA
WP_003818670.1|1911134_1912037_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930576.1|1912113_1912986_+	MOSC domain-containing protein	NA	NA	NA	NA	NA
WP_003818672.1|1913116_1913485_+	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
WP_010930577.1|1913542_1914589_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
WP_010930578.1|1914784_1916041_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_003810623.1|1916045_1917383_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_003818676.1|1917532_1918489_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247555.1|1918591_1919524_-	acyclic terpene utilization AtuA family protein	NA	NA	NA	NA	NA
WP_019247554.1|1919639_1919960_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930580.1|1919961_1920312_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930581.1|1920359_1921934_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810637.1|1921986_1922931_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930582.1|1922948_1923779_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930583.1|1923771_1925406_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	8.2e-18
WP_010930584.1|1925402_1926758_+	amidase	NA	NA	NA	NA	NA
WP_010930585.1|1927664_1929242_+	lipoprotein	NA	NA	NA	NA	NA
WP_010930586.1|1929245_1930520_+	type 4b pilus protein PilO2	NA	NA	NA	NA	NA
WP_010930587.1|1930617_1930992_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930588.1|1932707_1933841_+	general secretion pathway protein	NA	NA	NA	NA	NA
WP_003810661.1|1933878_1934484_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_010930589.1|1934480_1935299_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930590.1|1935370_1937995_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
WP_004568544.1|1937981_1938236_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_010930591.1|1938302_1938884_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010926757.1|1939187_1939448_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_014905757.1|1939613_1940237_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_003816734.1|1940236_1941010_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_010930593.1|1941006_1942215_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_010930594.1|1942240_1942714_-	RidA family protein	NA	NA	NA	NA	NA
WP_010930048.1|1942787_1943738_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879566.1|1943836_1944787_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930796.1|1944885_1946235_-	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_023852900.1|1947000_1947756_+	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_010930794.1|1947848_1950731_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
WP_003810689.1|1951053_1951479_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
WP_004568542.1|1951506_1952655_+	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_003810693.1|1952651_1953158_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930793.1|1953164_1954460_+	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_010930792.1|1954500_1955805_+|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930791.1|1955806_1956445_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_003810701.1|1956447_1957608_+	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_003810703.1|1957634_1958990_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_010930790.1|1958993_1960064_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
WP_003810707.1|1960202_1960439_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_010930789.1|1960526_1961633_+	GTPase HflX	NA	NA	NA	NA	NA
WP_010930788.1|1961598_1962903_+|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_010930787.1|1962921_1963821_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
>prophage 17
NZ_CP016962	Bordetella pertussis strain E898, complete genome	4103239	1974061	2018384	4103239	transposase	Staphylococcus_phage(25.0%)	46	NA	NA
WP_005013747.1|1974061_1975012_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|1975110_1976061_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879573.1|1976047_1976248_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930782.1|1976260_1977346_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_003810400.1|1977361_1978123_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930781.1|1978119_1979043_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.6	1.6e-23
WP_019248115.1|1979141_1979666_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930779.1|1979674_1980418_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_010930778.1|1980513_1980753_-	membrane protein	NA	NA	NA	NA	NA
WP_010930777.1|1980766_1980919_-	lipoprotein	NA	NA	NA	NA	NA
WP_010930776.1|1981004_1982495_-	cytochrome c oxidase accessory protein CcoG	NA	NA	NA	NA	NA
WP_010930775.1|1982586_1983525_-	cytochrome-c oxidase, cbb3-type subunit III	NA	NA	NA	NA	NA
WP_003818560.1|1983521_1983698_-	cytochrome oxidase	NA	NA	NA	NA	NA
WP_003810383.1|1983700_1984363_-	cytochrome-c oxidase, cbb3-type subunit II	NA	NA	NA	NA	NA
WP_003810379.1|1985984_1986128_-	cbb3-type cytochrome oxidase assembly protein CcoS	NA	NA	NA	NA	NA
WP_010930774.1|1986124_1987099_-	membrane protein	NA	NA	NA	NA	NA
WP_153302783.1|1987135_1987279_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1987265_1988216_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930773.1|1988212_1989487_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
WP_076879572.1|1989584_1990784_+	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
WP_010930771.1|1990780_1991434_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930770.1|1991430_1992867_+	dethiobiotin synthase	NA	NA	NA	NA	NA
WP_010930769.1|1992854_1993214_+	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_005012067.1|1994186_1995137_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930768.1|1996182_1998048_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930767.1|1998305_1999826_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_003816959.1|1999913_2000564_-	flavodoxin family protein	NA	NA	NA	NA	NA
WP_010930766.1|2001512_2002808_+	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_010930765.1|2002829_2003714_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930764.1|2003812_2004688_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_003816964.1|2004677_2005034_-	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
WP_076879571.1|2005107_2006139_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003812228.1|2006268_2006448_-	DUF3008 family protein	NA	NA	NA	NA	NA
WP_029443822.1|2006545_2007070_+	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_010930761.1|2007080_2007917_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816971.1|2008029_2008401_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930760.1|2008397_2008949_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_003816975.1|2008964_2010656_-	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
WP_003816977.1|2010704_2011385_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014905663.1|2011632_2012097_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930758.1|2012266_2013196_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_019247659.1|2013208_2013856_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023997035.1|2013929_2015747_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
WP_005012067.1|2015830_2016781_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154299520.1|2017285_2017447_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929577.1|2017433_2018384_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
NZ_CP016962	Bordetella pertussis strain E898, complete genome	4103239	2297945	2359308	4103239	tRNA,transposase	Yellowstone_lake_phycodnavirus(12.5%)	52	NA	NA
WP_005013747.1|2297945_2298896_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811701.1|2299012_2299732_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930605.1|2299904_2300891_+	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010930604.1|2300891_2301374_+	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_003811706.1|2301377_2302661_+	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_003811709.1|2302657_2303596_+	citrate lyase subunit beta	NA	NA	NA	NA	NA
WP_010930603.1|2303592_2305302_+	thiamine pyrophosphate-binding protein	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	27.3	5.9e-35
WP_010930602.1|2305311_2306559_+	Zn-dependent hydrolase	NA	NA	NA	NA	NA
WP_003811716.1|2308169_2309459_-	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA	NA
WP_003811719.1|2310596_2311370_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	3.1e-31
WP_010930601.1|2312031_2312775_-	glutamine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930600.1|2312849_2313590_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930599.1|2313785_2314622_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_010930598.1|2314672_2315443_-	TatD family hydrolase	NA	NA	NA	NA	NA
WP_010930597.1|2315492_2316545_-	DNA polymerase III subunit delta'	NA	NA	NA	NA	NA
WP_003811733.1|2316541_2317168_-	dTMP kinase	NA	A0A1L2BX49	Bacteriophage	35.1	1.6e-22
WP_077274084.1|2317164_2318211_-	endolytic transglycosylase MltG	NA	NA	NA	NA	NA
WP_010930595.1|2318377_2319394_+	folate-binding protein YgfZ	NA	NA	NA	NA	NA
WP_005012067.1|2319492_2320443_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930797.1|2323183_2324473_-	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_003810870.1|2324591_2325062_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930799.1|2325072_2326281_-	NO-inducible flavohemoprotein	NA	NA	NA	NA	NA
WP_003810867.1|2326427_2326892_+	GatB/YqeY domain-containing protein	NA	A0A0K2FLI9	Brevibacillus_phage	32.4	3.9e-05
WP_014905945.1|2326915_2327866_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930521.1|2328850_2329624_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930520.1|2329620_2330619_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930519.1|2330703_2331480_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.2	1.2e-30
WP_076879556.1|2331635_2333303_-	ABC-F family ATPase	NA	A0A1V0SKJ1	Klosneuvirus	28.9	1.6e-53
WP_003816541.1|2333620_2334745_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810992.1|2334871_2335495_+	TRAP transporter small permease subunit	NA	NA	NA	NA	NA
WP_010930517.1|2335491_2337393_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_010930516.1|2337441_2338236_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010930515.1|2338248_2339250_-	muramoyltetrapeptide carboxypeptidase	NA	NA	NA	NA	NA
WP_004568494.1|2339246_2339753_-|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	S4VYT2	Pandoravirus	38.4	3.4e-07
WP_010930513.1|2339745_2340594_-	hydrolase	NA	NA	NA	NA	NA
WP_077123453.1|2340691_2341249_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2341292_2342243_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930511.1|2342398_2342725_-	cation:proton antiporter	NA	NA	NA	NA	NA
WP_003810975.1|2342721_2343006_-	K+/H+ antiporter subunit F	NA	NA	NA	NA	NA
WP_010930510.1|2343002_2343482_-	Na+/H+ antiporter subunit E	NA	NA	NA	NA	NA
WP_004568496.1|2343478_2345107_-	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA	NA
WP_003810969.1|2345103_2345448_-	Na+/H+ antiporter subunit C	NA	NA	NA	NA	NA
WP_010930509.1|2345447_2348381_-	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA	NA
WP_010929588.1|2349539_2350490_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811452.1|2350588_2350885_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930508.1|2350991_2351909_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930507.1|2351913_2352627_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930506.1|2352640_2353612_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019249653.1|2355331_2355712_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930504.1|2355715_2356903_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930503.1|2357341_2358064_+	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
WP_005013747.1|2358357_2359308_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
NZ_CP016962	Bordetella pertussis strain E898, complete genome	4103239	2381148	2452296	4103239	transposase	Tetraselmis_virus(10.0%)	56	NA	NA
WP_005012067.1|2381148_2382099_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852967.1|2382651_2384277_-	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_010930475.1|2384326_2385361_-	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_010930476.1|2385363_2386710_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930477.1|2386706_2388221_-	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_077085662.1|2388211_2389693_-	DUF4381 family protein	NA	NA	NA	NA	NA
WP_010930479.1|2389689_2390631_-	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930480.1|2390639_2391608_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930481.1|2393147_2394116_+	transporter	NA	NA	NA	NA	NA
WP_010930482.1|2394293_2395283_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010926609.1|2395329_2396088_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930483.1|2396277_2397015_+	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_153302777.1|2396965_2397127_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|2397113_2398064_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816696.1|2398248_2399031_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_003810743.1|2399024_2399726_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003810741.1|2399965_2400568_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_157737559.1|2401752_2401908_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2401894_2402845_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486074.1|2402841_2404398_-	LTA synthase family protein	NA	NA	NA	NA	NA
WP_010930486.1|2404390_2405164_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_005013747.1|2405222_2406173_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852812.1|2406254_2407430_-	capsular biosynthesis protein	NA	NA	NA	NA	NA
WP_010930473.1|2407443_2409501_-	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_010930472.1|2409497_2410523_-	Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC	NA	A0A2K9L4U8	Tupanvirus	44.2	4.7e-72
WP_010930471.1|2410534_2411824_-	Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB	NA	NA	NA	NA	NA
WP_010930470.1|2411846_2412944_-	capsular polysaccharide export protein	NA	NA	NA	NA	NA
WP_003811224.1|2412940_2413831_-	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_010930469.1|2413827_2415912_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_010930468.1|2415943_2417113_-	capsule polysaccharide transporter	NA	NA	NA	NA	NA
WP_014486073.1|2417154_2417895_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_010930466.1|2417894_2418665_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930465.1|2419520_2420306_+	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	32.0	1.1e-12
WP_010930464.1|2420332_2422417_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247170.1|2422584_2424540_+	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_003811209.1|2424863_2425364_-	DNA starvation/stationary phase protection protein	NA	W5S6G8	Pithovirus	35.5	6.4e-14
WP_010930461.1|2425462_2426989_-	CoA-acylating methylmalonate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930460.1|2427126_2428014_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811203.1|2428028_2428982_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	26.5	7.2e-14
WP_033446218.1|2429033_2431124_-	ATP-dependent DNA helicase RecG	NA	NA	NA	NA	NA
WP_010930458.1|2431139_2431526_-	reactive intermediate/imine deaminase	NA	NA	NA	NA	NA
WP_010930457.1|2434219_2435023_-	2,5-didehydrogluconate reductase DkgB	NA	A0A2H4PQR8	Staphylococcus_phage	32.4	2.0e-33
WP_010930456.1|2436316_2437219_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811187.1|2437283_2438060_-	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
WP_010930455.1|2438381_2439431_+	Fe(3+) ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930454.1|2439554_2441225_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_019248220.1|2441229_2442024_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.4	8.3e-16
WP_005012067.1|2442122_2443073_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930453.1|2443092_2443998_-	pirin family protein	NA	NA	NA	NA	NA
WP_003811176.1|2444075_2444774_-	pirin family protein	NA	NA	NA	NA	NA
WP_010930452.1|2444933_2445878_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811170.1|2445887_2447378_-	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
WP_003811167.1|2447374_2448442_-	PAS domain-containing protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
WP_003811164.1|2448505_2449918_-	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_010930450.1|2450103_2451324_-	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
WP_005012808.1|2451345_2452296_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
NZ_CP016962	Bordetella pertussis strain E898, complete genome	4103239	2536496	2587663	4103239	tRNA,transposase	Salmonella_phage(20.0%)	48	NA	NA
WP_005012067.1|2536496_2537447_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812577.1|2537545_2538316_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.5	8.3e-29
WP_010930397.1|2538312_2538984_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuD	NA	NA	NA	NA	NA
WP_003812581.1|2538980_2539622_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuC	NA	NA	NA	NA	NA
WP_010930396.1|2539634_2540555_-	ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB	NA	NA	NA	NA	NA
WP_010930395.1|2540715_2541876_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930394.1|2541917_2542868_-	ornithine cyclodeaminase family protein	NA	NA	NA	NA	NA
WP_010930393.1|2543466_2543691_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930392.1|2543855_2545550_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA	NA
WP_003812598.1|2545671_2545941_-	HPr family phosphocarrier protein	NA	NA	NA	NA	NA
WP_003812601.1|2546056_2546455_-	PTS mannose transporter subunit IIA	NA	NA	NA	NA	NA
WP_010930391.1|2546465_2547422_-	glutathione synthase	NA	NA	NA	NA	NA
WP_033446215.1|2547558_2548104_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	29.9	9.1e-14
WP_003812608.1|2548124_2550074_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.0	4.1e-125
WP_019248759.1|2550461_2551238_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003812612.1|2551243_2551636_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2552057_2553008_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930389.1|2553004_2554102_-	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	37.3	3.5e-20
WP_005012067.1|2554133_2555084_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814009.1|2556860_2558102_-	MFS transporter	NA	NA	NA	NA	NA
WP_003814010.1|2558113_2558887_-	peroxide stress protein YaaA	NA	NA	NA	NA	NA
WP_005012067.1|2558913_2559864_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814011.1|2559962_2560745_-	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003814012.1|2560833_2562060_-	transporter	NA	NA	NA	NA	NA
WP_003814013.1|2562785_2564171_+	alcaligin siderophore biosynthesis protein AlcA	NA	NA	NA	NA	NA
WP_003814014.1|2564189_2564795_+	alcaligin siderophore biosynthesis protein AlcB	NA	NA	NA	NA	NA
WP_010930939.1|2564791_2566648_+	alcaligin siderophore biosynthesis protein AlcC	NA	NA	NA	NA	NA
WP_003814016.1|2566644_2567445_+	alcaligin siderophore biosynthesis protein AlcD	NA	NA	NA	NA	NA
WP_005013753.1|2567459_2568653_+	alcaligin siderophore biosynthesis protein AlcE	NA	NA	NA	NA	NA
WP_003814017.1|2568720_2569695_+	alcaligin siderophore biosynthesis transcriptional regulator AlcR	NA	NA	NA	NA	NA
WP_010930940.1|2569817_2571041_+	alcaligin siderophore export MFS transporter Bcr	NA	S4TR35	Salmonella_phage	29.4	9.8e-24
WP_010930941.1|2571151_2573356_+	TonB-dependent alcaligin siderophore receptor FauA	NA	NA	NA	NA	NA
WP_003814020.1|2573650_2574310_+	NAAT family transporter	NA	NA	NA	NA	NA
WP_019247690.1|2574317_2574524_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814021.1|2574862_2575618_+	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_003814022.1|2575633_2575795_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814023.1|2575888_2576404_+	hypothetical protein	NA	T1SAR8	Salmonella_phage	44.6	5.1e-06
WP_003814024.1|2576676_2576994_+	virulence factor	NA	NA	NA	NA	NA
WP_003814025.1|2577181_2577430_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930944.1|2577708_2579064_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
WP_003814028.1|2579110_2580490_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
WP_010930946.1|2580552_2581185_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_003814032.1|2581184_2583545_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
WP_010930948.1|2583586_2584546_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
WP_010929073.1|2584532_2585219_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005015014.1|2585215_2585548_+	multidrug transporter	NA	NA	NA	NA	NA
WP_005012067.1|2585663_2586614_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|2586712_2587663_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
NZ_CP016962	Bordetella pertussis strain E898, complete genome	4103239	2685958	2726627	4103239	tRNA,transposase	Salmonella_phage(33.33%)	45	NA	NA
WP_010929591.1|2685958_2686909_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004567479.1|2687019_2687202_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931004.1|2687301_2687898_-	lipoprotein	NA	NA	NA	NA	NA
WP_010931005.1|2688081_2689173_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003812822.1|2689672_2690083_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931006.1|2690141_2690483_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	42.2	2.8e-13
WP_010931007.1|2690488_2692906_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_010926359.1|2692918_2693941_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	38.6	1.0e-26
WP_003812832.1|2694015_2694375_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_003812834.1|2694390_2694588_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_010929584.1|2694923_2695874_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023996094.1|2695860_2696022_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003816756.1|2696068_2696518_+	dUTP diphosphatase	NA	S4TNT3	Salmonella_phage	67.2	3.7e-45
WP_005012808.1|2696514_2697465_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_153302788.1|2697451_2697592_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931008.1|2697575_2699024_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010931009.1|2699138_2699420_-	hypothetical protein	NA	NA	NA	NA	NA
WP_153302789.1|2699372_2699537_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2699523_2700474_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003820420.1|2700718_2701432_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_019247724.1|2701554_2701782_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003816758.1|2702076_2702715_-	DedA family protein	NA	NA	NA	NA	NA
WP_023994671.1|2702787_2703858_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_010929591.1|2703854_2704805_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931012.1|2705220_2705745_-	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
WP_004567322.1|2705748_2706018_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931013.1|2706216_2707278_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931014.1|2707361_2708996_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
WP_010931015.1|2708997_2709801_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931016.1|2709829_2710789_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931017.1|2710792_2712307_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248147.1|2712343_2713348_-	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931018.1|2713779_2714250_-	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
WP_010931019.1|2714285_2714897_-	LysE family translocator	NA	NA	NA	NA	NA
WP_010931020.1|2714927_2715551_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_010931021.1|2715631_2717164_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010931022.1|2717198_2718440_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931023.1|2718483_2719515_-	alcohol dehydrogenase catalytic domain-containing protein	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
WP_010931024.1|2719511_2720681_-	NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_010931025.1|2720674_2721355_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931026.1|2721516_2722359_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931027.1|2722521_2723493_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931028.1|2723664_2724543_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931029.1|2724565_2725636_-	FUSC family protein	NA	NA	NA	NA	NA
WP_005013747.1|2725676_2726627_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
NZ_CP016962	Bordetella pertussis strain E898, complete genome	4103239	2782092	2854962	4103239	tRNA,transposase	Moraxella_phage(16.67%)	59	NA	NA
WP_003810909.1|2782092_2782509_-|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931061.1|2782619_2783252_+	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA	NA
WP_010931062.1|2783280_2783724_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_003810897.1|2783745_2784837_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931063.1|2784891_2785692_-	aldolase	NA	NA	NA	NA	NA
WP_010931064.1|2785827_2786448_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931065.1|2786587_2787061_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|2788200_2789151_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931066.1|2789147_2796809_-	filamentous hemagglutinin N-terminal domain-containing protein	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
WP_010931067.1|2797049_2801096_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
WP_003816847.1|2801408_2801990_+	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010931068.1|2801986_2803285_+	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010931069.1|2803364_2804393_+	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_076879546.1|2804316_2804667_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931070.1|2804653_2805604_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|2805600_2806551_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931071.1|2806867_2807473_+	fimbrial protein	NA	NA	NA	NA	NA
WP_010931072.1|2807526_2808840_-	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
WP_003813284.1|2808914_2809385_-	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA	NA
WP_010931073.1|2809384_2810173_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
WP_010931074.1|2810183_2811836_-	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA	NA
WP_005012067.1|2811923_2812874_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931075.1|2814035_2814542_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA	NA
WP_003813293.1|2814538_2815303_-	phenylacetate-CoA oxygenase subunit PaaC	NA	NA	NA	NA	NA
WP_010931076.1|2815318_2815603_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA	NA
WP_003813298.1|2815667_2816657_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA	NA
WP_010931077.1|2816828_2817758_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA	NA
WP_003813302.1|2817729_2818416_-	NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
WP_003813303.1|2818449_2818995_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	37.7	2.1e-26
WP_003813306.1|2819039_2820305_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003813309.1|2820301_2821204_+	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA	NA
WP_019247679.1|2822385_2823330_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931079.1|2823424_2824942_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931080.1|2824983_2826612_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_003811986.1|2826719_2827601_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931081.1|2830713_2831088_+	endonuclease	NA	F4YXR7	Roseobacter_phage	54.4	2.1e-25
WP_003812004.1|2831112_2831451_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931082.1|2831494_2833129_-	NAD+ synthase	NA	A0A2L0UZF5	Agrobacterium_phage	36.6	8.3e-87
WP_010931083.1|2833167_2834514_-	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_003812010.1|2834621_2836043_+	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_010931084.1|2836112_2836697_-	nitroreductase	NA	NA	NA	NA	NA
WP_005012067.1|2836799_2837750_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931085.1|2837884_2838991_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010931086.1|2839001_2840099_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
WP_010931087.1|2840243_2841449_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_010931088.1|2841455_2841977_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA	NA
WP_010931089.1|2841973_2842465_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA	NA
WP_003819740.1|2842461_2842713_-	MoaD/ThiS family protein	NA	NA	NA	NA	NA
WP_003819741.1|2842693_2843179_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
WP_010931090.1|2843314_2846776_+	DUF748 domain-containing protein	NA	NA	NA	NA	NA
WP_076879578.1|2846772_2847678_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
WP_010931092.1|2847687_2848119_-	lipoprotein	NA	NA	NA	NA	NA
WP_003809348.1|2848365_2848869_+	peroxiredoxin	NA	M1I839	Pelagibacter_phage	44.1	1.8e-24
WP_023995849.1|2848880_2850347_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931095.1|2850421_2851297_-	membrane protein	NA	NA	NA	NA	NA
WP_023853546.1|2851293_2852301_-	biotin synthase BioB	NA	NA	NA	NA	NA
WP_010931097.1|2852768_2853074_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003819753.1|2853164_2853755_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930525.1|2853945_2854962_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 23
NZ_CP016962	Bordetella pertussis strain E898, complete genome	4103239	2858105	2924915	4103239	protease,transposase	uncultured_Mediterranean_phage(28.57%)	50	NA	NA
WP_023995489.1|2858105_2859056_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2859154_2860105_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931099.1|2860101_2860896_-	N-formylglutamate deformylase	NA	NA	NA	NA	NA
WP_010931100.1|2860927_2861632_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931101.1|2861706_2862507_-	SURF1 family protein	NA	NA	NA	NA	NA
WP_003809276.1|2862503_2862911_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_003819722.1|2862907_2863549_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_019247695.1|2863541_2865563_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_010931103.1|2866802_2868134_+	MFS transporter	NA	NA	NA	NA	NA
WP_005012067.1|2868130_2869081_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931105.1|2870787_2871054_-	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_003812839.1|2871761_2872100_+	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931107.1|2876652_2877255_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931108.1|2877351_2878641_+	MFS transporter	NA	NA	NA	NA	NA
WP_003812846.1|2878698_2879430_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931109.1|2879426_2880230_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812851.1|2880226_2881315_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|2881311_2882241_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812857.1|2882389_2883535_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930800.1|2883556_2884507_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154698391.1|2884524_2884683_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931110.1|2884837_2888659_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010931111.1|2888815_2889484_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_014905522.1|2889488_2891162_-	MCE family protein	NA	NA	NA	NA	NA
WP_003820402.1|2891180_2892500_-	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_023995053.1|2892504_2894856_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.2e-164
WP_010931115.1|2894875_2897044_-	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_010931116.1|2897040_2902230_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_003820400.1|2902319_2902634_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_003812875.1|2902861_2903107_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820399.1|2903201_2903720_+	hypothetical protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_010931117.1|2903819_2905025_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_019247560.1|2905140_2906538_-	chloride channel protein	NA	NA	NA	NA	NA
WP_010931119.1|2906654_2907233_-	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_010931120.1|2907305_2908697_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_005012067.1|2908864_2909815_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812889.1|2910095_2910716_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_010931122.1|2910712_2911126_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_010931123.1|2911122_2912166_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_003812895.1|2912221_2912410_+	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931124.1|2912419_2913184_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_010931125.1|2913274_2913931_+	adenylate kinase	NA	NA	NA	NA	NA
WP_010931126.1|2914022_2914781_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931127.1|2914806_2916408_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931128.1|2916608_2917613_+	DUF4880 domain-containing protein	NA	NA	NA	NA	NA
WP_003812908.1|2917713_2917977_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931129.1|2918094_2918871_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_005012067.1|2919461_2920412_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931130.1|2922795_2923908_-	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_005012808.1|2923964_2924915_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
NZ_CP016962	Bordetella pertussis strain E898, complete genome	4103239	2955301	3048289	4103239	transposase	Bacillus_virus(27.27%)	90	NA	NA
WP_005012067.1|2955301_2956252_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879632.1|2956238_2956484_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023852715.1|2956372_2957269_-	inositol monophosphatase	NA	NA	NA	NA	NA
WP_003814547.1|2959546_2961772_+	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_003814544.1|2961936_2963025_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_019247918.1|2962981_2963635_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931144.1|2963682_2964480_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930176.1|2965011_2965962_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994659.1|2966042_2967191_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|2967247_2968198_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879633.1|2968184_2968403_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814535.1|2968296_2968602_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_003820797.1|2968630_2969065_-	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_010931147.1|2969066_2970311_-	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003820799.1|2970307_2971018_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_033446288.1|2971032_2971944_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931149.1|2972306_2972711_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247890.1|2972707_2973166_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247891.1|2973172_2974081_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931150.1|2974077_2974944_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_003814524.1|2974930_2975758_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003820806.1|2975768_2976896_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_023852748.1|2977973_2979212_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931152.1|2979253_2980516_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010931153.1|2980522_2981275_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_019248355.1|2981326_2981512_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003820813.1|2981787_2982252_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_003820814.1|2982283_2982943_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_010931154.1|2983087_2985196_+	AsmA family protein	NA	NA	NA	NA	NA
WP_023852714.1|2985192_2986143_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931155.1|2986246_2986867_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003820818.1|2986970_2987711_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019248356.1|2988845_2989970_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247402.1|2990015_2990384_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2990625_2991576_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247492.1|2992611_2993154_-	hypothetical protein	NA	NA	NA	NA	NA
WP_124740747.1|2993346_2993553_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2993539_2994490_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997028.1|2994486_2995452_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815281.1|2995521_2996358_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	33.3	1.6e-33
WP_076879583.1|2996834_2997980_+	porin	NA	NA	NA	NA	NA
WP_005012067.1|2998041_2998992_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931159.1|2999184_2999967_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931160.1|2999980_3000730_-	SDR family oxidoreductase	NA	A0A0M4JSW6	Mollivirus	26.4	1.2e-11
WP_010931161.1|3000757_3002104_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931162.1|3002129_3003059_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003819549.1|3003174_3004080_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931163.1|3004097_3005297_-	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_010931164.1|3005369_3006062_-	HD domain-containing protein	NA	A0A1D6Y7U0	Golden_Marseillevirus	29.9	4.7e-07
WP_010931165.1|3006110_3008537_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	33.8	1.2e-86
WP_023853143.1|3008581_3009532_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154698394.1|3009549_3009696_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003809026.1|3009748_3010117_-	DUF861 domain-containing protein	NA	NA	NA	NA	NA
WP_003809025.1|3010403_3011330_+	VOC family protein	NA	NA	NA	NA	NA
WP_010931167.1|3011373_3012384_+	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_010931168.1|3012380_3012815_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_010931169.1|3013940_3014729_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.0	1.1e-33
WP_010931170.1|3014738_3015521_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931171.1|3015524_3016616_-	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
WP_010931172.1|3016721_3018197_+	acyl--CoA ligase	NA	Q75ZG1	Hepacivirus	25.6	3.0e-35
WP_010931173.1|3018338_3018887_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003809010.1|3018902_3019364_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931174.1|3019464_3020454_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931175.1|3020752_3021454_+	riboflavin synthase	NA	NA	NA	NA	NA
WP_010931176.1|3021492_3022866_-	amidase	NA	NA	NA	NA	NA
WP_023997744.1|3022904_3024191_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931177.1|3025077_3025980_+	transcriptional regulator GcvA	NA	NA	NA	NA	NA
WP_010931178.1|3025927_3027148_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931179.1|3027144_3027654_-	nucleoside deaminase	NA	NA	NA	NA	NA
WP_010926062.1|3027643_3028339_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_010931181.1|3028409_3029279_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930208.1|3029628_3030579_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486089.1|3031439_3032129_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.8	4.8e-12
WP_003818691.1|3032905_3033868_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_014486091.1|3033871_3034732_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003808978.1|3034725_3035118_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014486092.1|3035148_3036321_-	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	39.6	1.1e-59
WP_014486094.1|3037772_3038570_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_014486095.1|3038603_3039383_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486096.1|3039411_3040284_-	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_003818698.1|3040305_3041055_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.5	6.2e-29
WP_014486097.1|3041062_3041920_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_019247597.1|3041960_3042524_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247598.1|3042554_3042851_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014486098.1|3042931_3043735_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_003818702.1|3043755_3044952_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247599.1|3044954_3045956_-	amidase	NA	NA	NA	NA	NA
WP_019249309.1|3046308_3046479_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014486100.1|3046573_3047236_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3047338_3048289_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 25
NZ_CP016962	Bordetella pertussis strain E898, complete genome	4103239	3183409	3245643	4103239	protease,transposase	Xanthomonas_phage(33.33%)	53	NA	NA
WP_005012067.1|3183409_3184360_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931248.1|3184368_3184917_+	phospholipid:lipid A palmitoyltransferase	NA	NA	NA	NA	NA
WP_003814557.1|3184913_3185522_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_003814558.1|3185704_3186175_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931250.1|3186181_3187441_-	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_010931251.1|3187493_3188306_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003814561.1|3188420_3188975_+	cysteine dioxygenase	NA	NA	NA	NA	NA
WP_023998380.1|3188984_3189974_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003814563.1|3190153_3190873_-	VOC family protein	NA	NA	NA	NA	NA
WP_003814564.1|3190889_3193625_-	preprotein translocase subunit SecA	NA	NA	NA	NA	NA
WP_003814565.1|3193804_3194791_-	M23 family metallopeptidase	NA	A0A292GJG6	Xanthomonas_phage	51.8	3.4e-27
WP_003814566.1|3194832_3195327_+	flagellar hook-length control protein FliK	NA	NA	NA	NA	NA
WP_003814567.1|3195438_3196362_-	UDP-3-O-acyl-N-acetylglucosamine deacetylase	NA	NA	NA	NA	NA
WP_003814568.1|3196590_3197775_-	cell division protein FtsZ	NA	NA	NA	NA	NA
WP_003814569.1|3197963_3199190_-	cell division protein FtsA	NA	NA	NA	NA	NA
WP_003814570.1|3199194_3200016_-	cell division protein FtsQ/DivIB	NA	NA	NA	NA	NA
WP_003814571.1|3200028_3200979_-	D-alanine--D-alanine ligase	NA	NA	NA	NA	NA
WP_010931256.1|3200975_3202382_-	UDP-N-acetylmuramate--L-alanine ligase	NA	NA	NA	NA	NA
WP_010931257.1|3202378_3203452_-	undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	NA	NA	NA	NA	NA
WP_010931258.1|3203448_3204642_-	putative lipid II flippase FtsW	NA	NA	NA	NA	NA
WP_010931259.1|3204638_3206171_-	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA	NA	NA	NA	NA
WP_019247664.1|3206167_3207337_-	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA	NA
WP_010931260.1|3207326_3210164_-	bifunctional UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase MurE/UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF	NA	NA	NA	NA	NA
WP_076879606.1|3210160_3211861_-	penicillin-binding protein 2	NA	NA	NA	NA	NA
WP_010931262.1|3211887_3212166_-	cell division protein FtsL	NA	NA	NA	NA	NA
WP_003814582.1|3212165_3213260_-	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	NA	NA	NA	NA	NA
WP_003814584.1|3213268_3213760_-	division/cell wall cluster transcriptional repressor MraZ	NA	NA	NA	NA	NA
WP_010931264.1|3214499_3216308_+	ATP-binding cassette domain-containing protein	NA	A0A1B0RXA0	Streptococcus_phage	28.6	1.6e-43
WP_010931265.1|3216347_3217427_-	dihydroorotase	NA	NA	NA	NA	NA
WP_003820761.1|3217423_3218617_-	amidohydrolase	NA	NA	NA	NA	NA
WP_003814592.1|3218766_3219045_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814593.1|3219374_3219767_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003820758.1|3226491_3226968_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931267.1|3227120_3228233_+	4-hydroxyphenylpyruvate dioxygenase	NA	NA	NA	NA	NA
WP_010931268.1|3228300_3228861_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_010929235.1|3228884_3229217_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_010931269.1|3229200_3230889_-	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
WP_003820749.1|3231008_3231797_+	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA	NA
WP_005012808.1|3232504_3233455_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995100.1|3233414_3233591_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814611.1|3233899_3234211_-	cell division protein ZapA	NA	NA	NA	NA	NA
WP_003820745.1|3234210_3234741_-	hypothetical protein	NA	NA	NA	NA	NA
WP_154299518.1|3234749_3234917_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3234903_3235854_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003820744.1|3236143_3236608_+	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA	NA
WP_010931270.1|3236622_3238128_+	tripartite tricarboxylate transporter permease	NA	NA	NA	NA	NA
WP_010931271.1|3238381_3239989_+	gamma-glutamyltransferase family protein	NA	NA	NA	NA	NA
WP_003814620.1|3240044_3240950_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010931070.1|3241390_3242341_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853416.1|3242422_3243004_-	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA	NA
WP_003807161.1|3243428_3243734_+	copper-binding protein	NA	NA	NA	NA	NA
WP_003807162.1|3243747_3245082_-|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A191ZC11	Erwinia_phage	29.6	3.5e-43
WP_010931291.1|3245103_3245643_-|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
>prophage 26
NZ_CP016962	Bordetella pertussis strain E898, complete genome	4103239	3264066	3311658	4103239	holin,tRNA,transposase	Tupanvirus(16.67%)	41	NA	NA
WP_010931277.1|3264066_3264402_+|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_003807199.1|3264401_3265244_+	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA	NA
WP_005013747.1|3265342_3266293_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818443.1|3266357_3267329_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003818444.1|3267392_3268412_-	histone deacetylase family protein	NA	A0A2K9L473	Tupanvirus	31.7	3.4e-22
WP_003807204.1|3268413_3269787_-	MHS family MFS transporter	NA	NA	NA	NA	NA
WP_010931276.1|3270064_3270745_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
WP_023995440.1|3270757_3272884_+	lytic transglycosylase domain-containing protein	NA	A0A0S2SXL7	Bacillus_phage	36.6	5.5e-14
WP_010931274.1|3272880_3273975_+|tRNA	CCA tRNA nucleotidyltransferase	tRNA	A0A0F6YPT7	Sinorhizobium_phage	50.5	2.4e-50
WP_004566001.1|3273989_3275249_-	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_010931273.1|3275268_3276993_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.9	9.5e-49
WP_003818450.1|3277231_3277984_-	uracil-DNA glycosylase	NA	A0A1Y0B680	Bovine_alphaherpesvirus	47.5	2.5e-46
WP_023994812.1|3277992_3278136_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|3278122_3279073_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443788.1|3279385_3280864_+	phospholipase D family protein	NA	NA	NA	NA	NA
WP_010931293.1|3280870_3281980_-	molybdenum ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.5	7.5e-23
WP_003808339.1|3281991_3282672_-	molybdate ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_003808340.1|3282693_3283449_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010925959.1|3283584_3284469_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010931294.1|3284556_3285138_+	CGNR zinc finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931295.1|3285230_3285353_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004566249.1|3285398_3285698_-	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_076879609.1|3285849_3286275_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003808356.1|3288481_3288985_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3289000_3289951_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_085964339.1|3289937_3290135_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814148.1|3290478_3291252_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814146.1|3291384_3292395_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931298.1|3292546_3294202_-	gamma-glutamyltransferase family protein	NA	NA	NA	NA	NA
WP_003814142.1|3294256_3294598_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_010931299.1|3294611_3296051_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003814139.1|3296183_3296999_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_127063726.1|3296975_3297206_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|3297192_3298143_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443749.1|3299530_3300478_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014905961.1|3300704_3301445_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3301530_3302481_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905963.1|3303922_3305494_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_019247179.1|3305826_3307680_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247178.1|3307724_3310289_+	autotransporter domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|3310707_3311658_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 27
NZ_CP016962	Bordetella pertussis strain E898, complete genome	4103239	3377888	3431629	4103239	transposase	Staphylococcus_phage(33.33%)	50	NA	NA
WP_023995489.1|3377888_3378839_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931336.1|3379243_3379888_-	urease accessory protein UreG	NA	NA	NA	NA	NA
WP_019247677.1|3379912_3380497_-	urease accessory protein UreF	NA	NA	NA	NA	NA
WP_014905506.1|3380597_3381215_-	urease accessory protein UreE	NA	NA	NA	NA	NA
WP_010931337.1|3381217_3382933_-	urease subunit alpha	NA	NA	NA	NA	NA
WP_010931338.1|3382929_3383238_-	urease subunit beta	NA	NA	NA	NA	NA
WP_015040527.1|3383254_3383890_-	HupE/UreJ family protein	NA	NA	NA	NA	NA
WP_010931340.1|3383916_3384219_-	urease subunit gamma	NA	NA	NA	NA	NA
WP_003814832.1|3384319_3385174_-	urease accessory protein UreD	NA	NA	NA	NA	NA
WP_124740609.1|3385361_3385586_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929281.1|3385755_3386028_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_010929282.1|3386445_3386853_-	GFA family protein	NA	NA	NA	NA	NA
WP_010931341.1|3387222_3388017_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010927102.1|3388117_3389353_+	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003814852.1|3389421_3390438_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_029443830.1|3390434_3391826_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003814856.1|3391822_3393019_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814858.1|3393015_3394554_-	SpoVR family protein	NA	NA	NA	NA	NA
WP_010931343.1|3394550_3395810_-	YeaH/YhbH family protein	NA	NA	NA	NA	NA
WP_005012067.1|3397750_3398701_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_157737561.1|3398687_3398864_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931344.1|3399467_3400562_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247312.1|3400554_3401889_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_003808193.1|3401842_3402526_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003808195.1|3402551_3403715_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_004566224.1|3403711_3404713_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931346.1|3404712_3405585_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931347.1|3405581_3406331_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931348.1|3406327_3407119_-	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931349.1|3407115_3408255_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_033446332.1|3408563_3409316_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486103.1|3409349_3410132_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_010931351.1|3410135_3410525_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931352.1|3411664_3412528_+	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931353.1|3412563_3413652_+	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_005013747.1|3413648_3414599_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_080501793.1|3414585_3414999_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247959.1|3414952_3417931_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003818344.1|3418857_3419736_+	fatty acid desaturase	NA	NA	NA	NA	NA
WP_005013747.1|3421684_3422635_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931354.1|3422631_3423099_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_010931355.1|3423141_3423912_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_010927090.1|3423932_3424733_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931356.1|3424743_3426153_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_003814739.1|3426247_3427033_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931561.1|3427272_3428289_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814742.1|3428396_3428789_-	OsmC family protein	NA	NA	NA	NA	NA
WP_010931357.1|3428926_3429607_+	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_010931358.1|3429611_3430610_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930179.1|3430678_3431629_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 28
NZ_CP016962	Bordetella pertussis strain E898, complete genome	4103239	3437784	3497084	4103239	tRNA,transposase	Acinetobacter_phage(27.27%)	48	NA	NA
WP_003820957.1|3437784_3439548_+|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
WP_010931362.1|3439659_3440538_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003814250.1|3440650_3441466_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_003814252.1|3441469_3441721_+	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_010929632.1|3441805_3442822_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814254.1|3443152_3443374_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_019247693.1|3445734_3446652_-	DMT family transporter	NA	NA	NA	NA	NA
WP_019247692.1|3447149_3448358_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931365.1|3448437_3450009_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814275.1|3450126_3451062_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_003814277.1|3451250_3452195_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
WP_003814281.1|3452263_3452479_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814283.1|3452762_3458480_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
WP_010931367.1|3458485_3459613_+	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
WP_003814287.1|3459668_3460295_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|3460566_3461583_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010927020.1|3461678_3462389_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931368.1|3462385_3463375_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_023852728.1|3463506_3465102_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931370.1|3465104_3465842_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247745.1|3465997_3466870_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_003814298.1|3467138_3468359_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814300.1|3468355_3469015_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_003814302.1|3469086_3469719_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_010931372.1|3469748_3470267_+	flavin reductase family protein	NA	NA	NA	NA	NA
WP_010931373.1|3470277_3471387_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003814312.1|3471433_3472288_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931374.1|3472289_3473192_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3474414_3475365_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997720.1|3477121_3478111_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931375.1|3478286_3479075_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_003817833.1|3479071_3480103_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_003815390.1|3480121_3480685_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_010931376.1|3480740_3482261_-	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_010931377.1|3482524_3483229_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_003815384.1|3483236_3483974_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_003815381.1|3484079_3484454_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003815379.1|3484496_3485786_+	murein transglycosylase A	NA	NA	NA	NA	NA
WP_010931378.1|3485782_3486952_+	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_010931379.1|3486948_3487788_+	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931380.1|3487847_3488783_+	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_005012067.1|3488795_3489746_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931381.1|3489844_3490807_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_003817821.1|3490838_3491198_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931382.1|3491322_3492225_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_010931383.1|3492226_3493999_-	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_003815367.1|3494033_3494810_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_023852617.1|3496133_3497084_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 29
NZ_CP016962	Bordetella pertussis strain E898, complete genome	4103239	3512022	3570095	4103239	tRNA,transposase	Planktothrix_phage(12.5%)	47	NA	NA
WP_005012808.1|3512022_3512973_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931392.1|3513101_3514235_-	M20 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931393.1|3514278_3515184_-	hydrolase	NA	NA	NA	NA	NA
WP_023852622.1|3515186_3516887_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	1.0e-15
WP_010931394.1|3516883_3517804_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003817805.1|3517811_3518789_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931395.1|3518847_3519882_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003815317.1|3521856_3522093_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931396.1|3522219_3523083_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_003815315.1|3523171_3523993_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003815313.1|3524072_3524810_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931397.1|3524806_3525799_-	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_003817794.1|3525912_3526575_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931399.1|3526619_3527768_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931400.1|3530091_3531042_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486105.1|3531382_3532333_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|3532431_3533382_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443756.1|3533678_3534176_+	cupredoxin family protein	NA	NA	NA	NA	NA
WP_010931403.1|3534218_3535994_+	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
WP_076879643.1|3536040_3536868_+	copper resistance protein B	NA	NA	NA	NA	NA
WP_019249391.1|3536874_3537609_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931406.1|3538778_3539573_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815296.1|3539862_3540453_+	cysteine dioxygenase	NA	NA	NA	NA	NA
WP_010931407.1|3540486_3541815_-	amidase	NA	NA	NA	NA	NA
WP_010931408.1|3541889_3543035_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014905478.1|3543146_3544145_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446233.1|3544107_3544542_+	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
WP_010929974.1|3546058_3546943_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929973.1|3546939_3548145_-	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010929972.1|3548141_3549002_-	endonuclease	NA	NA	NA	NA	NA
WP_003807038.1|3549114_3550905_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
WP_003807035.1|3550945_3551611_-	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	6.7e-11
WP_010929971.1|3551611_3551920_-	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929970.1|3552085_3553372_-	membrane protein	NA	NA	NA	NA	NA
WP_010929969.1|3554805_3555756_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929968.1|3557707_3558922_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
WP_003815171.1|3559027_3560017_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
WP_003815172.1|3560013_3560622_+	HAD-IIIA family hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
WP_010929967.1|3560634_3561264_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_003815175.1|3561260_3561881_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_003815177.1|3561912_3562704_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
WP_003815179.1|3563546_3564011_+	PTS transporter subunit EIIA	NA	NA	NA	NA	NA
WP_010929965.1|3564029_3564956_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_010929964.1|3565009_3566296_-	cytochrome c	NA	NA	NA	NA	NA
WP_003815183.1|3567226_3568099_+	RNase adapter RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
WP_010929963.1|3568095_3569046_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
WP_005012067.1|3569144_3570095_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 31
NZ_CP016962	Bordetella pertussis strain E898, complete genome	4103239	4002307	4067219	4103239	transposase	Planktothrix_phage(40.0%)	60	NA	NA
WP_039249574.1|4002307_4002793_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_153302797.1|4002881_4003019_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931647.1|4003011_4003992_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019248461.1|4004258_4005068_+	pertussis toxin ADP-ribosyltransferase subunit PtxA	NA	NA	NA	NA	NA
WP_014906114.1|4005107_4005788_+	pertussis toxin binding subunit PtxB	NA	NA	NA	NA	NA
WP_010929491.1|4005781_4006240_+	pertussis toxin subunit 4	NA	NA	NA	NA	NA
WP_023853616.1|4006251_4006614_+	pertussis toxin binding subunit PtxD	NA	NA	NA	NA	NA
WP_010931651.1|4006696_4007380_+	pertussis toxin binding subunit PtxE	NA	NA	NA	NA	NA
WP_010929493.1|4007435_4007744_+	type IV secretion system protein PtlA	NA	NA	NA	NA	NA
WP_010929494.1|4007762_4008077_+	type IV secretion system protein PtlB	NA	NA	NA	NA	NA
WP_010931652.1|4008073_4010548_+	type IV secretion system protein PtlC	NA	NA	NA	NA	NA
WP_010931653.1|4010555_4011947_+	type IV secretion system protein PtlD	NA	NA	NA	NA	NA
WP_010929497.1|4011943_4012129_+	type IV secretion system protein PtlI	NA	NA	NA	NA	NA
WP_010929498.1|4012107_4012809_+	type IV secretion system peptidoglycanase PtlE	NA	NA	NA	NA	NA
WP_010931654.1|4012805_4013627_+	type IV secretion system protein PtlF	NA	NA	NA	NA	NA
WP_010931655.1|4013607_4014732_+	type IV secretion system protein PtlG	NA	NA	NA	NA	NA
WP_010929500.1|4014724_4015744_+	type IV secretion system protein PtlH	NA	NA	NA	NA	NA
WP_024000452.1|4015949_4016984_-	DMT family transporter	NA	NA	NA	NA	NA
WP_010929501.1|4017084_4017876_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003815873.1|4017958_4018333_+	DUF1232 domain-containing protein	NA	NA	NA	NA	NA
WP_010931658.1|4018310_4019720_+	DUF2868 domain-containing protein	NA	NA	NA	NA	NA
WP_003815876.1|4019712_4021095_+	GTPase/DUF3482 domain-containing protein	NA	A0A0R6PHS5	Moraxella_phage	38.9	9.9e-57
WP_003815878.1|4021429_4023034_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_077274089.1|4023069_4024083_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931660.1|4024093_4025020_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931661.1|4025410_4026361_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931662.1|4026530_4027757_+	bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA	NA	NA	NA	NA
WP_010931663.1|4027956_4028823_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_003815027.1|4028815_4029778_+	Nudix family hydrolase	NA	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	53.4	1.9e-06
WP_010927663.1|4029878_4030829_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|4030927_4031878_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|4031976_4032927_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994937.1|4032923_4034417_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_003815032.1|4034413_4037521_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931665.1|4037517_4040586_-	MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931666.1|4040582_4041833_-	MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_003815038.1|4042013_4042775_-	cell division protein ZapD	NA	NA	NA	NA	NA
WP_019247320.1|4042807_4043458_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
WP_003820519.1|4043460_4044300_-	prepilin peptidase	NA	NA	NA	NA	NA
WP_003815047.1|4044540_4045284_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815049.1|4045366_4045714_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003815051.1|4045811_4046654_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_003815053.1|4046698_4047586_-	segregation/condensation protein A	NA	NA	NA	NA	NA
WP_003815055.1|4047612_4047801_-	DUF3460 family protein	NA	NA	NA	NA	NA
WP_010931669.1|4047898_4049356_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_010931670.1|4049342_4050869_+	glycerol kinase GlpK	NA	NA	NA	NA	NA
WP_003815061.1|4050887_4051355_-	membrane protein	NA	NA	NA	NA	NA
WP_010931671.1|4051354_4052377_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003815064.1|4052497_4053238_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	4.4e-35
WP_003815066.1|4053292_4054393_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815068.1|4054394_4055585_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815070.1|4055704_4056721_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	42.1	1.0e-71
WP_003815073.1|4057039_4057711_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	38.2	9.5e-29
WP_010927126.1|4057707_4058616_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_010931672.1|4058827_4059475_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA	NA
WP_010931673.1|4063326_4064403_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
WP_003815084.1|4064413_4065223_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815086.1|4065312_4066086_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_023996063.1|4066105_4066282_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930363.1|4066268_4067219_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
