The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP017123	Bordetella pertussis strain J153 chromosome, complete genome	4106365	27282	70036	4106365	transposase,tRNA	Synechococcus_phage(50.0%)	42	NA	NA
WP_010929577.1|27282_28233_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995007.1|28314_28650_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929578.1|28674_29109_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247164.1|29141_30359_-	thiolase family protein	NA	NA	NA	NA	NA
WP_010929580.1|30364_30862_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_019247165.1|31069_32005_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929582.1|32214_33006_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929583.1|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_010929584.1|34625_35576_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814398.1|35572_36763_-	MFS transporter	NA	NA	NA	NA	NA
WP_010929585.1|37012_37924_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_010929586.1|37925_40064_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003814404.1|40060_40600_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_003814405.1|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929587.1|41318_42212_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247766.1|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_003814412.1|42687_43218_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
WP_023852754.1|43346_43646_-	DUF1974 domain-containing protein	NA	NA	NA	NA	NA
WP_010929588.1|43663_44614_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929589.1|45200_45749_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815265.1|45720_45957_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815255.1|46084_46978_+	membrane protein	NA	NA	NA	NA	NA
WP_010929590.1|48147_49395_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003817748.1|49391_50006_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
WP_010929591.1|50141_51092_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443813.1|51134_52391_+	muropeptide transporter	NA	NA	NA	NA	NA
WP_010929592.1|53622_54357_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_019247224.1|54362_54953_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
WP_003817737.1|54977_55667_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_023852650.1|55663_56425_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010929594.1|56504_57404_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|57497_58448_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929595.1|59248_60475_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_010929596.1|60474_60894_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929597.1|61077_62019_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248755.1|62442_63417_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929599.1|63473_64055_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010929600.1|64067_64370_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_029443770.1|64488_65547_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_019247832.1|65581_66853_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010929603.1|67482_68664_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|69085_70036_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP017123	Bordetella pertussis strain J153 chromosome, complete genome	4106365	77634	136107	4106365	transposase,tRNA	Planktothrix_phage(22.22%)	53	NA	NA
WP_005012067.1|77634_78585_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166334.1|78659_79604_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929608.1|79600_81475_-	polysaccharide biosynthesis protein	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
WP_003807102.1|82822_83527_-	DUF2837 family protein	NA	NA	NA	NA	NA
WP_003807104.1|83523_84630_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010929610.1|84891_85485_-	sugar transferase	NA	NA	NA	NA	NA
WP_023853419.1|85481_86669_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	NA	NA	NA	NA
WP_010929612.1|86731_87991_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_010929613.1|88014_89103_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
WP_010929614.1|89110_90211_-	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
WP_003807114.1|90214_90790_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_003807115.1|90793_91846_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_010929615.1|91976_92984_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
WP_010929616.1|92985_94272_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
WP_010929617.1|94468_95272_-	type III pantothenate kinase	NA	NA	NA	NA	NA
WP_010929618.1|95268_96135_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_010929619.1|96209_97340_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003807131.1|97339_98179_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
WP_010929620.1|99111_99714_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929621.1|99743_100397_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003807138.1|100529_101786_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	6.2e-66
WP_023853421.1|101866_102733_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
WP_003818417.1|102808_103084_+	YbeD family protein	NA	NA	NA	NA	NA
WP_010929623.1|103091_103754_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA	NA
WP_003807146.1|103815_104817_+	lipoyl synthase	NA	NA	NA	NA	NA
WP_003807148.1|104831_105380_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.4	3.7e-47
WP_010929624.1|105437_106334_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_010929625.1|106330_107392_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
WP_010929626.1|107427_108378_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929627.1|109276_110470_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_010929628.1|110551_111181_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
WP_010927242.1|111242_111926_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_023853376.1|111935_113618_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003815933.1|113905_114253_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
WP_003815930.1|114343_114661_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|114943_115960_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815929.1|116035_116836_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003815927.1|116832_117708_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_010929633.1|117718_119011_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929634.1|119053_120094_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
WP_010929635.1|120199_121021_-	phosphodiesterase	NA	NA	NA	NA	NA
WP_005012067.1|121121_122072_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014905488.1|122170_123076_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.7	9.8e-21
WP_003815918.1|123072_123906_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010929637.1|124742_125753_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_019247800.1|125749_126139_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010929638.1|127032_128286_+	amidase	NA	NA	NA	NA	NA
WP_010929639.1|128376_130077_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_010929640.1|130503_131151_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023853393.1|131149_132589_+	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_023853394.1|132699_132984_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_010929512.1|133011_133890_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|135156_136107_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP017123	Bordetella pertussis strain J153 chromosome, complete genome	4106365	164892	225402	4106365	transposase,tRNA,protease	Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)	51	NA	NA
WP_005015810.1|164892_165843_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929659.1|167286_168189_-	YgcG family protein	NA	NA	NA	NA	NA
WP_003815889.1|168166_168796_-	LemA family protein	NA	NA	NA	NA	NA
WP_010929660.1|169078_170509_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.8	5.8e-44
WP_010929661.1|170542_171172_+	LysE family transporter	NA	NA	NA	NA	NA
WP_003815895.1|171220_172828_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
WP_010929663.1|172852_173536_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815898.1|173617_174094_-	bacterioferritin	NA	NA	NA	NA	NA
WP_010929591.1|174300_175251_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929664.1|176366_176894_+	META domain-containing protein	NA	NA	NA	NA	NA
WP_010929665.1|176985_177801_+	META and DUF4377 domain-containing protein	NA	NA	NA	NA	NA
WP_003808370.1|177861_178596_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_010929666.1|178633_180712_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
WP_003808374.1|180961_181234_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446322.1|181335_182421_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010929668.1|182424_184329_+	BamA/TamA family outer membrane protein	NA	NA	NA	NA	NA
WP_014486044.1|184325_188000_+	DUF490 domain-containing protein	NA	NA	NA	NA	NA
WP_010929670.1|188060_188624_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
WP_003808385.1|188631_189054_-	glyoxalase	NA	NA	NA	NA	NA
WP_010929671.1|189081_189501_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_077274090.1|189529_189976_-	GNAT family N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	29.4	1.2e-08
WP_003808391.1|190102_190600_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003808393.1|190754_193025_+	arginine/lysine/ornithine decarboxylase	NA	NA	NA	NA	NA
WP_019249381.1|193100_194306_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010929591.1|194403_195354_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929673.1|195456_196092_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.8e-83
WP_019248671.1|196088_196982_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_010929675.1|197376_198477_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_010929676.1|198558_198933_+	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_010929677.1|198992_201857_+	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
WP_010929678.1|202001_202742_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929679.1|202811_204023_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929680.1|204051_205020_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931070.1|205633_206584_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929699.1|206740_207064_+	phosphate starvation-inducible protein	NA	NA	NA	NA	NA
WP_023853200.1|207168_208209_-	cyclase	NA	NA	NA	NA	NA
WP_010929697.1|208214_208994_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
WP_003807672.1|209039_209336_-	YciI family protein	NA	NA	NA	NA	NA
WP_003807674.1|209361_209637_-	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
WP_003819086.1|209693_210338_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010929696.1|210337_211024_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_033446325.1|211222_212005_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929694.1|212055_212781_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929693.1|212812_214162_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929692.1|214273_215206_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_033455792.1|215663_218459_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
WP_023994893.1|219052_221896_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_010929689.1|222066_222786_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_010929688.1|222824_223373_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929687.1|223527_224427_+	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_005012808.1|224451_225402_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP017123	Bordetella pertussis strain J153 chromosome, complete genome	4106365	233333	286921	4106365	transposase,tRNA,protease	Bacillus_phage(25.0%)	48	NA	NA
WP_005012067.1|233333_234284_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|234370_235321_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930742.1|235317_236268_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929700.1|236366_237164_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003814363.1|238113_238524_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA	NA
WP_003814358.1|239545_240289_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814356.1|240332_241376_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814355.1|241546_243649_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_003814351.1|245059_246016_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929701.1|246034_246526_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_010929702.1|246522_247878_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
WP_010929703.1|247878_248577_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_010929704.1|248573_249275_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
WP_003814339.1|249527_250577_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
WP_003814337.1|250682_251624_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_010929705.1|251620_253510_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
WP_003814332.1|253596_254235_+	membrane protein	NA	NA	NA	NA	NA
WP_019247543.1|254377_255763_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.5e-17
WP_010929706.1|255693_256230_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_010929707.1|256381_257773_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_010929708.1|257789_258770_-	AEC family transporter	NA	NA	NA	NA	NA
WP_003814324.1|258905_259889_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
WP_010929709.1|259953_260853_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814321.1|260959_262714_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_010929710.1|262721_263846_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929711.1|263859_264840_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012067.1|265570_266521_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929712.1|267080_267626_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852659.1|267751_269329_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_004567834.1|269344_270499_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_003817696.1|270512_270638_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_010929714.1|270634_272386_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
WP_010929715.1|272382_274062_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
WP_010929716.1|274124_274673_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.3e-28
WP_010929717.1|275815_276094_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|277137_278088_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879590.1|278074_278290_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929718.1|278365_278527_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_162096757.1|278847_279105_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815821.1|279193_279643_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
WP_003815819.1|279652_280264_-	stringent starvation protein A	NA	NA	NA	NA	NA
WP_010929720.1|280422_281271_-	cytochrome c1	NA	NA	NA	NA	NA
WP_003815816.1|281296_282679_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_003815815.1|282743_283385_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_010929721.1|283524_283983_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_010927226.1|284007_284784_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_014906092.1|284837_285974_+|protease	trypsin-like serine protease	protease	W5SAB9	Pithovirus	31.2	1.2e-07
WP_005015810.1|285970_286921_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP017123	Bordetella pertussis strain J153 chromosome, complete genome	4106365	390853	448362	4106365	transposase	Orpheovirus(14.29%)	50	NA	NA
WP_005012067.1|390853_391804_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927231.1|391940_392858_+	reductase	NA	NA	NA	NA	NA
WP_003815842.1|392854_393103_+	glutaredoxin family protein	NA	NA	NA	NA	NA
WP_003815840.1|393099_394305_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486045.1|394377_395373_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486046.1|395395_396616_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486047.1|396612_397257_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248476.1|398987_399797_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486048.1|400101_401055_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	42.5	5.6e-59
WP_014486049.1|401153_402137_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486050.1|402063_402765_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486051.1|402813_403584_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_019247259.1|403580_404759_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486052.1|404926_406633_-	thiamine pyrophosphate-requiring protein	NA	NA	NA	NA	NA
WP_014486053.1|406629_407526_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486054.1|407566_409156_-	sulfurtransferase	NA	NA	NA	NA	NA
WP_003807867.1|409205_410198_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807865.1|410266_410866_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014486055.1|411326_412307_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929577.1|412382_413333_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122777.1|413421_414336_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929782.1|414332_414992_+	LysE family translocator	NA	NA	NA	NA	NA
WP_003814709.1|415081_416005_+	alpha/beta fold hydrolase	NA	A0A1C9C5K3	Heterosigma_akashiwo_virus	27.2	4.8e-07
WP_010929783.1|416010_416466_-	multidrug/biocide efflux PACE transporter	NA	NA	NA	NA	NA
WP_010929784.1|416462_417566_-	ChbG/HpnK family deacetylase	NA	NA	NA	NA	NA
WP_157734656.1|417524_417794_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010927086.1|417753_419373_-	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_003814720.1|419369_420428_-	glycosyltransferase family 2 protein	NA	I1TED8	Salmonella_phage	40.5	2.8e-59
WP_033446199.1|420557_421052_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_022997984.1|421144_422122_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929785.1|422317_423523_+	sodium/glutamate symporter	NA	NA	NA	NA	NA
WP_010929786.1|423519_425031_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_003814726.1|425046_426360_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_003814728.1|426550_426730_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814730.1|427139_427874_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
WP_010929577.1|430318_431269_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247421.1|431400_431799_-	GTP-binding protein	NA	E4ZFJ7	Streptococcus_phage	44.3	9.0e-19
WP_003814701.1|432209_432680_-	universal stress protein	NA	NA	NA	NA	NA
WP_003820700.1|432768_433113_-	TIGR01244 family phosphatase	NA	NA	NA	NA	NA
WP_010929788.1|433212_434613_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010929789.1|436401_436920_-	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	38.9	2.1e-12
WP_003814694.1|437030_437786_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	40.8	2.9e-42
WP_003814691.1|437981_439214_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929791.1|439206_439992_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_003814685.1|440058_441030_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003814681.1|441040_442018_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247419.1|442143_443316_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010929793.1|443342_444371_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003814674.1|444436_445630_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_005012067.1|447411_448362_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
NZ_CP017123	Bordetella pertussis strain J153 chromosome, complete genome	4106365	589366	650558	4106365	transposase,protease	uncultured_Mediterranean_phage(40.0%)	55	NA	NA
WP_005013747.1|589366_590317_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446133.1|590792_591683_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_010931496.1|591679_592501_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_019247235.1|592701_593193_+	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_019247236.1|593211_594285_+	CHAD domain-containing protein	NA	NA	NA	NA	NA
WP_023853086.1|594331_595435_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
WP_003808577.1|595510_596131_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_003808574.1|596151_596661_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	42.1	1.2e-28
WP_003808570.1|596715_596967_+	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	53.4	1.6e-18
WP_010931494.1|597030_598164_+	benzoate/H(+) symporter BenE family transporter	NA	NA	NA	NA	NA
WP_003808567.1|598171_598558_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931493.1|598554_601074_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003808563.1|601502_601841_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003808562.1|601837_602344_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_010931492.1|602405_603206_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931491.1|603316_604258_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931490.1|604351_605887_-	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931489.1|607566_609417_-	dipeptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.2	1.6e-17
WP_003808549.1|609420_610254_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931488.1|610253_611195_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931487.1|611446_612418_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931486.1|612559_614848_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003808542.1|615154_616063_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010931485.1|616117_617083_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_062810229.1|617157_618819_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_010931483.1|618890_619601_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|619749_620700_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814152.1|621398_621782_+	membrane protein	NA	NA	NA	NA	NA
WP_010927005.1|621839_622442_+	DUF2946 family protein	NA	NA	NA	NA	NA
WP_003820995.1|622459_622861_-	DoxX family protein	NA	NA	NA	NA	NA
WP_010931482.1|622976_623888_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931481.1|623884_624466_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_003814165.1|625260_625995_+	arginyltransferase	NA	NA	NA	NA	NA
WP_010931480.1|626035_627085_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_003814172.1|627232_627811_-	TIGR01841 family phasin	NA	NA	NA	NA	NA
WP_010931479.1|628197_629175_+	tripartite tricarboxylate transporter substrate binding protein BugD	NA	NA	NA	NA	NA
WP_010931478.1|629268_633663_-	dermonecrotic toxin	NA	NA	NA	NA	NA
WP_003814178.1|633863_634712_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931477.1|634870_635683_-	competence/damage-inducible protein A	NA	NA	NA	NA	NA
WP_005015810.1|635738_636689_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931453.1|636787_637588_-	EI24 domain-containing protein	NA	NA	NA	NA	NA
WP_003814185.1|637649_638033_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_033446148.1|638044_639397_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	2.1e-51
WP_003814188.1|639684_640014_-	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_010931455.1|640016_640766_-	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010931456.1|640948_641869_+	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_003814195.1|641915_642128_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931457.1|642150_642573_+	SnoaL-like domain-containing protein	NA	NA	NA	NA	NA
WP_010931458.1|642589_643690_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010931459.1|643786_645304_-|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_003814203.1|645379_646219_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_033446149.1|646240_647113_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814206.1|647203_648298_-	porin	NA	NA	NA	NA	NA
WP_076879617.1|648591_649542_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166340.1|649616_650558_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 7
NZ_CP017123	Bordetella pertussis strain J153 chromosome, complete genome	4106365	655882	702073	4106365	transposase,tail,tRNA,terminase	uncultured_Caudovirales_phage(18.18%)	50	NA	NA
WP_023995141.1|655882_656908_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814221.1|656948_657188_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931464.1|657257_658847_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_010931465.1|658846_659395_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_003814226.1|659475_660048_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010927008.1|660066_660978_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814230.1|661051_662020_-	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010931466.1|662142_663216_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_010931467.1|663220_665041_-	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_010930800.1|665117_666068_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446132.1|666156_666492_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_003819076.1|666625_667276_+	carbonic anhydrase	NA	NA	NA	NA	NA
WP_010931468.1|667297_668716_-	amidase	NA	NA	NA	NA	NA
WP_019248554.1|668785_669541_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247734.1|669509_670268_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931471.1|670278_671160_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931472.1|671176_671884_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931473.1|671886_672645_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931474.1|672854_674597_+	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010925795.1|674589_675114_+	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931475.1|675153_675948_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248926.1|676115_677189_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|677287_678238_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247378.1|678489_678696_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931451.1|678767_679379_-	S24 family peptidase	NA	NA	NA	NA	NA
WP_023853179.1|679933_680185_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_161633094.1|680177_680867_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|681123_682074_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247942.1|682713_683199_+|transposase	transposase	transposase	C7U0W1	Enterobacteria_phage	61.5	7.3e-39
WP_010931447.1|683185_684463_+|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_010931446.1|684465_685884_+	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931445.1|685912_686968_+	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931444.1|686973_687216_+	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931443.1|687338_687941_+	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_005012808.1|688369_689320_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931442.1|689994_690246_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|690308_690791_+	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_162096760.1|690804_690993_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931439.1|690992_691388_+	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_010931438.1|691384_691783_+	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931437.1|691779_692202_+	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_010931436.1|692209_692710_+	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931435.1|692964_693483_+	hypothetical protein	NA	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_003813412.1|693492_693822_+	hypothetical protein	NA	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931434.1|693839_694130_+	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_010931433.1|694155_696768_+|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931432.1|696777_697137_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931431.1|697204_697738_+	DUF1833 family protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931430.1|697734_698124_+	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931429.1|698116_702073_+	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
>prophage 8
NZ_CP017123	Bordetella pertussis strain J153 chromosome, complete genome	4106365	708239	762169	4106365	transposase,tRNA	Planktothrix_phage(50.0%)	46	NA	NA
WP_003814636.1|708239_709970_+|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
WP_010931419.1|710022_710451_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814641.1|710453_711134_+	protein TolQ	NA	NA	NA	NA	NA
WP_003814643.1|711133_711592_+	protein TolR	NA	NA	NA	NA	NA
WP_010931418.1|711628_712603_+	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_010931417.1|712619_713936_+	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_003814650.1|713967_714465_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_003814652.1|714551_715241_+	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_010931416.1|715240_716290_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003814657.1|716286_717081_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
WP_019247923.1|717249_717600_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247922.1|717575_718133_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012808.1|719262_720213_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929184.1|722350_723580_+	spore maturation protein	NA	NA	NA	NA	NA
WP_003814419.1|723582_725025_-	pyruvate kinase	NA	NA	NA	NA	NA
WP_010931414.1|725129_726275_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
WP_010931413.1|726306_727104_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010931412.1|727128_728688_-	chaperone SurA	NA	NA	NA	NA	NA
WP_010931411.1|728684_731057_-	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_010931410.1|731166_732270_+	phosphotransferase	NA	NA	NA	NA	NA
WP_010931409.1|732269_732962_+	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_003814436.1|733105_733807_+	membrane protein	NA	NA	NA	NA	NA
WP_003814437.1|733791_734169_-	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_005012067.1|734900_735851_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814441.1|736010_736883_-	oxaloacetate decarboxylase	NA	NA	NA	NA	NA
WP_003814443.1|737223_737442_+	DUF1059 domain-containing protein	NA	NA	NA	NA	NA
WP_019247242.1|737481_738861_-	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_010929976.1|738902_740300_-	amidase family protein	NA	NA	NA	NA	NA
WP_010927038.1|740339_741992_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.8	6.0e-16
WP_010929977.1|741995_742880_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929978.1|742879_743821_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929979.1|743899_745519_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929980.1|745685_746501_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814459.1|746568_747138_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|747138_748089_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814461.1|748743_749841_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
WP_003814462.1|749874_751140_+	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929591.1|751297_752248_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929982.1|752491_753082_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_010929983.1|753097_755542_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_003814467.1|755661_756633_-	FecR family protein	NA	NA	NA	NA	NA
WP_023852739.1|756764_757289_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_005012067.1|757248_758199_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929984.1|758420_760616_-	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
WP_020699729.1|760688_761096_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|761218_762169_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_CP017123	Bordetella pertussis strain J153 chromosome, complete genome	4106365	853047	913923	4106365	transposase	Vibrio_phage(25.0%)	51	NA	NA
WP_010929591.1|853047_853998_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247352.1|854015_854570_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813949.1|854571_855006_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003813951.1|855002_855437_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003813952.1|855420_856224_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_003813954.1|856240_857056_-	DNA repair exonuclease	NA	NA	NA	NA	NA
WP_019248500.1|857052_857868_-	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_010930033.1|858014_858716_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813960.1|858743_860702_-	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	30.3	8.0e-28
WP_005013747.1|860784_861735_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930032.1|861955_862624_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_010930031.1|862747_863854_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_010930030.1|863866_866980_+	MexW/MexI family multidrug efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	21.5	4.5e-57
WP_010930029.1|866976_868470_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010926969.1|868484_869156_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_003813974.1|869199_869694_-	azurin	NA	NA	NA	NA	NA
WP_010930027.1|869834_870482_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_023853163.1|870585_872634_+	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010930025.1|872630_874643_+	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010930024.1|874668_876003_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_003813981.1|876111_877104_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813982.1|877170_879255_-	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
WP_010930023.1|879279_880251_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930022.1|880379_881411_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930021.1|881414_882566_-	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_076879542.1|882736_883660_+	transcriptional regulator LrhA	NA	NA	NA	NA	NA
WP_003813987.1|883737_884562_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_023994644.1|884758_885775_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003813988.1|885971_886955_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930019.1|888553_889942_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003813991.1|889972_890962_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813992.1|891072_892305_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003813993.1|892586_893387_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930018.1|893409_895641_-	BCCT family transporter	NA	NA	NA	NA	NA
WP_010930017.1|896428_896875_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_003813996.1|896896_897643_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_003813997.1|897786_898764_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
WP_010930016.1|899397_900009_+	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
WP_003813999.1|900002_901220_-	threonine ammonia-lyase	NA	NA	NA	NA	NA
WP_005013747.1|901360_902311_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|902409_903360_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814000.1|903356_904076_-	lipoprotein	NA	NA	NA	NA	NA
WP_003821234.1|904196_906356_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_003814002.1|906446_906716_-	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_005019401.1|906804_907011_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814003.1|907009_907537_+	lipoprotein	NA	NA	NA	NA	NA
WP_003814004.1|907555_908335_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930015.1|908502_909519_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_003814006.1|909591_910083_-	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_003814007.1|910093_911809_-	acetolactate synthase 3 catalytic subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	30.3	3.1e-60
WP_005012067.1|912972_913923_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP017123	Bordetella pertussis strain J153 chromosome, complete genome	4106365	934670	998263	4106365	transposase	Bacillus_virus(15.38%)	58	NA	NA
WP_005012067.1|934670_935621_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930064.1|935673_935895_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810832.1|936054_936267_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810835.1|936386_937505_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_003810837.1|937601_937817_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810839.1|938010_938262_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930066.1|938374_939325_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810840.1|939321_939705_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_023852913.1|939759_941574_-	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
WP_010930068.1|941723_942551_+	oxidoreductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
WP_010930069.1|942596_943577_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_003810850.1|943573_943786_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810851.1|943782_944964_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_019248496.1|945127_945862_+	serine/threonine protein phosphatase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
WP_010930071.1|945863_948476_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_003810859.1|948611_950525_-	S9 family peptidase	NA	NA	NA	NA	NA
WP_010930072.1|951140_951551_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003810865.1|951648_952734_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_005012067.1|952832_953783_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930088.1|953779_954754_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003821497.1|954878_955790_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
WP_004566317.1|956066_956459_-	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
WP_005012808.1|956588_957539_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930090.1|957568_957751_-	type II toxin-antitoxin system HicA family toxin	NA	A0A1L2JY37	Aeribacillus_phage	56.1	3.7e-12
WP_010930091.1|958523_959705_-	MFS transporter	NA	NA	NA	NA	NA
WP_010930092.1|959920_960598_-	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_010930093.1|960594_961320_-	bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase	NA	NA	NA	NA	NA
WP_010930094.1|961445_962027_-	OmpA family protein	NA	NA	NA	NA	NA
WP_010930095.1|962397_965079_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	3.2e-104
WP_023852687.1|965081_966212_+	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	44.0	4.9e-78
WP_010930097.1|966204_967290_+	prephenate dehydratase	NA	NA	NA	NA	NA
WP_010930098.1|967376_968276_+	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010930099.1|968272_969601_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_010930100.1|969615_970287_+	(d)CMP kinase	NA	NA	NA	NA	NA
WP_010930101.1|970474_972190_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_010930102.1|972191_972551_+	integration host factor subunit beta	NA	NA	NA	NA	NA
WP_010930103.1|972742_973057_+	DUF1049 domain-containing protein	NA	NA	NA	NA	NA
WP_010930104.1|973099_974320_+	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
WP_010930105.1|974316_975258_+	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	A0A2H4N7X4	Lake_Baikal_phage	28.1	1.5e-16
WP_003821513.1|975254_976244_+	ADP-glyceromanno-heptose 6-epimerase	NA	E3SJ87	Synechococcus_phage	34.4	2.2e-26
WP_033446303.1|976278_976863_+	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|976961_977912_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486062.1|977992_978904_+	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	38.8	8.0e-47
WP_010930108.1|978964_980110_-	lytic murein transglycosylase B	NA	NA	NA	NA	NA
WP_003821521.1|980129_981044_+	histone deacetylase family protein	NA	A0A2K9KZC4	Tupanvirus	34.7	9.8e-45
WP_010930110.1|981115_981865_+	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
WP_010930111.1|981864_982794_+	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA	NA
WP_003821527.1|983037_984864_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003813333.1|984946_985588_+	peroxiredoxin	NA	NA	NA	NA	NA
WP_003821528.1|985777_986812_+	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930112.1|988648_989713_+	sulfate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.3	3.8e-24
WP_010930113.1|990510_991419_+	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA	NA
WP_023852693.1|992906_994181_+	PA0069 family radical SAM protein	NA	NA	NA	NA	NA
WP_023852686.1|994334_994715_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014905652.1|994722_995595_-	EamA family transporter	NA	NA	NA	NA	NA
WP_003813315.1|995900_996281_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_003813314.1|996491_997217_+	CoA pyrophosphatase	NA	NA	NA	NA	NA
WP_005012067.1|997312_998263_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 11
NZ_CP017123	Bordetella pertussis strain J153 chromosome, complete genome	4106365	1024375	1082460	4106365	transposase,tRNA	uncultured_Mediterranean_phage(37.5%)	51	NA	NA
WP_010929584.1|1024375_1025326_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930130.1|1025424_1026165_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_010930131.1|1026359_1028396_+	transketolase	NA	NA	NA	NA	NA
WP_010930132.1|1028413_1029424_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_010930133.1|1029541_1030735_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_010930134.1|1030764_1031538_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010930135.1|1031534_1032725_-	acetate kinase	NA	NA	NA	NA	NA
WP_003809454.1|1032750_1033689_-	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_010930136.1|1033685_1036034_-	DUF3141 domain-containing protein	NA	NA	NA	NA	NA
WP_010930137.1|1036188_1036830_-	glutathione transferase	NA	NA	NA	NA	NA
WP_023994624.1|1038159_1038312_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930138.1|1038343_1038892_-	diguanylate cyclase	NA	NA	NA	NA	NA
WP_003819814.1|1038910_1039396_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930139.1|1039573_1040512_+	DnaJ domain-containing protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
WP_003809467.1|1040514_1040832_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247197.1|1040877_1041822_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010930141.1|1043502_1044153_+	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
WP_003809479.1|1044206_1044542_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930142.1|1044538_1045399_+	M23 family metallopeptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
WP_003819817.1|1045415_1045697_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003809486.1|1045770_1046034_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_005012067.1|1046277_1047228_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811933.1|1047526_1048264_-	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
WP_010930143.1|1048699_1049023_+	flagellar transcriptional regulator FlhD	NA	NA	NA	NA	NA
WP_003811929.1|1049057_1049618_+	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
WP_003811927.1|1049738_1050614_+	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
WP_003817154.1|1050626_1051574_+	flagellar motor protein MotB	NA	NA	NA	NA	NA
WP_019247393.1|1051675_1051969_+	response regulator	NA	NA	NA	NA	NA
WP_010930144.1|1051995_1054053_+	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_003811919.1|1054067_1054568_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_010930145.1|1054641_1056348_+	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
WP_010930146.1|1057211_1058264_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
WP_003811911.1|1058316_1058706_+	chemotaxis protein CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
WP_003817162.1|1058714_1059347_+	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_010931363.1|1059446_1060463_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003819773.1|1061293_1062301_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_014486064.1|1062297_1063941_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_010930149.1|1063937_1064825_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003809396.1|1064965_1065439_-	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_010930151.1|1065428_1066451_-	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
WP_015041211.1|1066447_1067875_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010931363.1|1068812_1069829_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003809411.1|1070161_1071097_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.5	3.0e-41
WP_010930154.1|1071146_1073027_-	protein translocase subunit SecD	NA	NA	NA	NA	NA
WP_003809416.1|1073093_1073438_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.4	1.0e-10
WP_010930155.1|1073582_1074719_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
WP_023853534.1|1074715_1075789_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_003809423.1|1075946_1077383_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_010930157.1|1077473_1078115_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_023853536.1|1078450_1079467_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_005012808.1|1081509_1082460_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NZ_CP017123	Bordetella pertussis strain J153 chromosome, complete genome	4106365	1086506	1158527	4106365	holin,tRNA,transposase	Planktothrix_phage(18.18%)	57	NA	NA
WP_003819794.1|1086506_1086920_+|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_010930161.1|1086921_1087281_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853525.1|1087323_1088868_-	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
WP_010930163.1|1088951_1089782_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_010930164.1|1089816_1090971_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_010930165.1|1091013_1091886_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486065.1|1092002_1094291_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003809441.1|1095497_1095962_+	barstar family protein	NA	NA	NA	NA	NA
WP_005013747.1|1095988_1096939_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154698393.1|1096956_1097094_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930167.1|1097306_1098083_-	phosphate ABC transporter ATP-binding protein PstB	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
WP_003809638.1|1098127_1098985_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_010930169.1|1099006_1100023_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_014486066.1|1100157_1101198_-	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
WP_010930171.1|1101392_1103474_-	polyphosphate kinase 1	NA	NA	NA	NA	NA
WP_010930172.1|1103709_1105203_+	exopolyphosphatase	NA	NA	NA	NA	NA
WP_003809629.1|1105433_1106228_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003819875.1|1106448_1107807_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_010930173.1|1107803_1108646_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
WP_010930174.1|1108664_1110551_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
WP_162096758.1|1110492_1110744_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930175.1|1110788_1111421_-	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
WP_003809618.1|1111439_1112042_+	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
WP_010929591.1|1112193_1113144_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_161633091.1|1113724_1114432_+	DUF192 domain-containing protein	NA	NA	NA	NA	NA
WP_003812707.1|1114790_1115777_-	homoserine kinase	NA	NA	NA	NA	NA
WP_010930178.1|1115916_1116930_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_005012067.1|1116926_1117877_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812703.1|1117989_1118448_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003812701.1|1118484_1119798_-	YihY family inner membrane protein	NA	NA	NA	NA	NA
WP_010930180.1|1119815_1120187_+	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
WP_019248549.1|1120183_1121647_+	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
WP_010930182.1|1121787_1122516_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_010930183.1|1122497_1125347_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_010929591.1|1125559_1126510_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930184.1|1126677_1127502_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
WP_010930185.1|1127501_1128380_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930186.1|1129284_1130400_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_020699602.1|1130428_1131223_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.3	1.2e-11
WP_010930188.1|1131219_1133085_+	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
WP_003812436.1|1133163_1133796_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930189.1|1133792_1134095_-	membrane protein	NA	NA	NA	NA	NA
WP_010930190.1|1134137_1135658_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
WP_010926447.1|1135664_1136420_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010926448.1|1136449_1137554_-	peptide chain release factor 2	NA	NA	NA	NA	NA
WP_010930191.1|1137656_1139357_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.3	1.3e-50
WP_010930192.1|1139338_1140316_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247537.1|1140325_1141606_+	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_003812422.1|1141598_1142294_+	lipoprotein-releasing ABC transporter ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	38.6	7.0e-35
WP_010928340.1|1142327_1143155_+	TatD family hydrolase	NA	NA	NA	NA	NA
WP_010930194.1|1143436_1146667_+	autotransporter SphB3	NA	NA	NA	NA	NA
WP_010930196.1|1147402_1151329_+	inverse autotransporter beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_023853221.1|1153228_1155025_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248398.1|1155024_1155993_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816844.1|1156062_1156908_+	PHP domain-containing protein	NA	NA	NA	NA	NA
WP_003812405.1|1156975_1157530_+	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_010930198.1|1157576_1158527_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP017123	Bordetella pertussis strain J153 chromosome, complete genome	4106365	1176314	1236200	4106365	transposase,tRNA	Bacillus_phage(25.0%)	44	NA	NA
WP_005012067.1|1176314_1177265_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930207.1|1177394_1178378_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813618.1|1178432_1179155_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930211.1|1180633_1181989_+|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930212.1|1182069_1184445_-	RNA-binding transcriptional accessory protein	NA	NA	NA	NA	NA
WP_010930213.1|1184609_1186685_+	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	30.0	2.4e-75
WP_033446255.1|1186746_1187541_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
WP_010930214.1|1187648_1188611_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_019247742.1|1188598_1189354_+	peptidoglycan editing factor PgeF	NA	NA	NA	NA	NA
WP_010930216.1|1189461_1191099_+	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA	NA
WP_003813586.1|1191166_1191904_+	acetoacetyl-CoA reductase	NA	NA	NA	NA	NA
WP_003813585.1|1192006_1192582_+	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA	NA
WP_010930217.1|1192754_1193291_+	membrane protein	NA	NA	NA	NA	NA
WP_033451623.1|1193323_1193638_+	cupredoxin domain-containing protein	NA	NA	NA	NA	NA
WP_010930218.1|1193653_1194499_+	membrane protein	NA	NA	NA	NA	NA
WP_003821443.1|1194537_1195917_+	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_003813574.1|1195994_1196876_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_010929956.1|1196974_1197925_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811632.1|1197921_1198332_-	VOC family protein	NA	NA	NA	NA	NA
WP_010930219.1|1198439_1199294_-	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_003811636.1|1199286_1200249_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930220.1|1200294_1201419_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	Q6A202	Oenococcus_phage	28.3	1.5e-31
WP_019247966.1|1201524_1202403_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930222.1|1202527_1203307_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930223.1|1203460_1204882_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930224.1|1205316_1207014_+	sodium:solute symporter family protein	NA	NA	NA	NA	NA
WP_010930225.1|1207240_1208182_-	LD-carboxypeptidase	NA	NA	NA	NA	NA
WP_010930226.1|1208508_1209255_+	aldolase	NA	NA	NA	NA	NA
WP_033446252.1|1209262_1210189_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930228.1|1210310_1211228_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003811660.1|1211267_1212221_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811662.1|1212245_1212824_+	amino acid synthesis family protein	NA	NA	NA	NA	NA
WP_010930229.1|1214497_1215106_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930230.1|1215183_1215537_-	NirD/YgiW/YdeI family stress tolerance protein	NA	NA	NA	NA	NA
WP_010930231.1|1215620_1216610_-	succinylglutamate desuccinylase	NA	NA	NA	NA	NA
WP_076879566.1|1216812_1217763_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|1217849_1218800_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931070.1|1218796_1219747_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931069.1|1220007_1221036_-	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010931068.1|1221115_1222414_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_003816847.1|1222410_1222992_-	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010931067.1|1223304_1227351_+	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
WP_010931066.1|1227591_1235253_+	filamentous hemagglutinin N-terminal domain-containing protein	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
WP_005012067.1|1235249_1236200_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_CP017123	Bordetella pertussis strain J153 chromosome, complete genome	4106365	1270675	1327885	4106365	transposase	Klosneuvirus(16.67%)	50	NA	NA
WP_010931070.1|1270675_1271626_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931041.1|1275372_1275984_-	DUF2239 family protein	NA	NA	NA	NA	NA
WP_003812368.1|1276206_1277667_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.3	1.6e-97
WP_010931040.1|1277763_1279356_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	33.3	1.0e-17
WP_019247974.1|1279709_1279967_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003816876.1|1279968_1281309_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_010931038.1|1281404_1282094_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247976.1|1282106_1283537_+	MFS transporter	NA	NA	NA	NA	NA
WP_014905903.1|1285261_1286083_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931036.1|1286093_1287665_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010931035.1|1287693_1288671_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931034.1|1288697_1289501_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.2	2.7e-30
WP_010931033.1|1289497_1290292_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003816890.1|1290299_1291535_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_019247978.1|1291548_1291962_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_162291062.1|1292317_1292590_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1292711_1293662_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931031.1|1294283_1296011_-	sulfate permease	NA	NA	NA	NA	NA
WP_010931030.1|1296122_1297481_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_005013747.1|1297773_1298724_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931029.1|1298764_1299835_+	FUSC family protein	NA	NA	NA	NA	NA
WP_010931028.1|1299857_1300736_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931027.1|1300907_1301879_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931026.1|1302041_1302884_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931025.1|1303045_1303726_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931024.1|1303719_1304889_+	NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_010931023.1|1304885_1305917_+	alcohol dehydrogenase catalytic domain-containing protein	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
WP_023853282.1|1305984_1307202_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931021.1|1307236_1308769_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010931020.1|1308849_1309473_+	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_010931019.1|1309503_1310115_+	LysE family translocator	NA	NA	NA	NA	NA
WP_010931018.1|1310150_1310621_+	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
WP_033456131.1|1310810_1311044_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019248147.1|1311051_1312056_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931017.1|1312092_1313607_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931016.1|1313610_1314570_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931015.1|1314598_1315402_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931014.1|1315403_1317038_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
WP_010931013.1|1317121_1318183_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_004567322.1|1318381_1318651_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931012.1|1318654_1319179_+	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
WP_010929591.1|1319594_1320545_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931011.1|1320541_1321576_-	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_003816758.1|1321684_1322323_+	DedA family protein	NA	NA	NA	NA	NA
WP_019247724.1|1322617_1322845_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003820420.1|1322967_1323681_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_005013747.1|1323925_1324876_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853496.1|1325015_1325261_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931008.1|1325375_1326824_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_005012808.1|1326934_1327885_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP017123	Bordetella pertussis strain J153 chromosome, complete genome	4106365	1418118	1470271	4106365	transposase,tRNA	Salmonella_phage(25.0%)	44	NA	NA
WP_005013747.1|1418118_1419069_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814065.1|1419235_1419589_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814063.1|1419601_1419964_+	cytochrome c	NA	NA	NA	NA	NA
WP_003814061.1|1420005_1420431_-	DUF1841 family protein	NA	NA	NA	NA	NA
WP_003814059.1|1420633_1421890_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	64.8	1.2e-11
WP_003814057.1|1422088_1423069_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005015028.1|1423218_1424460_+	O-antigen ligase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1424558_1425509_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814052.1|1425517_1426213_-	two-component system response regulator KdpE	NA	NA	NA	NA	NA
WP_003814050.1|1429034_1429634_-	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
WP_010930950.1|1429644_1431810_-	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	27.1	1.2e-24
WP_010930949.1|1431833_1433618_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA	NA
WP_017685545.1|1433617_1433707_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_003814042.1|1434401_1434674_+	DUF4212 domain-containing protein	NA	NA	NA	NA	NA
WP_003814040.1|1434673_1436740_+	cation acetate symporter	NA	NA	NA	NA	NA
WP_010929577.1|1436736_1437687_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|1437785_1438736_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005015014.1|1438851_1439184_-	multidrug transporter	NA	NA	NA	NA	NA
WP_010929073.1|1439180_1439867_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930948.1|1439853_1440813_-	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
WP_010930947.1|1440845_1443215_+	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
WP_010930946.1|1443214_1443847_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_010930945.1|1443948_1445289_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
WP_010930944.1|1445335_1446691_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
WP_005014990.1|1446981_1447218_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814024.1|1447405_1447723_-	virulence factor	NA	NA	NA	NA	NA
WP_003814023.1|1447995_1448511_-	hypothetical protein	NA	T1SAR8	Salmonella_phage	44.6	5.1e-06
WP_003814021.1|1448781_1449537_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_019247690.1|1449875_1450082_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814020.1|1450089_1450749_-	NAAT family transporter	NA	NA	NA	NA	NA
WP_010930941.1|1451043_1453248_-	TonB-dependent alcaligin siderophore receptor FauA	NA	NA	NA	NA	NA
WP_010930940.1|1453358_1454582_-	alcaligin siderophore export MFS transporter Bcr	NA	S4TR35	Salmonella_phage	29.4	9.8e-24
WP_003814017.1|1454704_1455679_-	alcaligin siderophore biosynthesis transcriptional regulator AlcR	NA	NA	NA	NA	NA
WP_005013753.1|1455746_1456940_-	alcaligin siderophore biosynthesis protein AlcE	NA	NA	NA	NA	NA
WP_003814016.1|1456954_1457755_-	alcaligin siderophore biosynthesis protein AlcD	NA	NA	NA	NA	NA
WP_010930939.1|1457751_1459608_-	alcaligin siderophore biosynthesis protein AlcC	NA	NA	NA	NA	NA
WP_003814014.1|1459604_1460210_-	alcaligin siderophore biosynthesis protein AlcB	NA	NA	NA	NA	NA
WP_003814013.1|1460228_1461614_-	alcaligin siderophore biosynthesis protein AlcA	NA	NA	NA	NA	NA
WP_003814012.1|1462339_1463566_+	transporter	NA	NA	NA	NA	NA
WP_003814011.1|1463654_1464437_+	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|1464535_1465486_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814010.1|1465512_1466286_+	peroxide stress protein YaaA	NA	NA	NA	NA	NA
WP_003814009.1|1466297_1467539_+	MFS transporter	NA	NA	NA	NA	NA
WP_076879548.1|1469320_1470271_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
NZ_CP017123	Bordetella pertussis strain J153 chromosome, complete genome	4106365	1514196	1582281	4106365	transposase,tRNA	Streptococcus_virus(11.11%)	57	NA	NA
WP_010930416.1|1514196_1514685_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_019248504.1|1514802_1515381_+	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_010930418.1|1515486_1515855_+	ribbon-helix-helix domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|1515953_1516904_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994932.1|1516910_1518023_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
WP_010930419.1|1518709_1519912_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930420.1|1520115_1522776_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930421.1|1522788_1526193_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_023995689.1|1526860_1529086_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.5	1.2e-43
WP_010930423.1|1529132_1529459_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_010930424.1|1529509_1530118_+	recombination protein RecR	NA	NA	NA	NA	NA
WP_005013747.1|1530216_1531167_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930425.1|1531236_1532001_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446226.1|1531997_1532534_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930427.1|1532700_1533552_-	membrane protein	NA	A0A1I9SA48	Rhodococcus_phage	35.3	7.0e-37
WP_010928449.1|1533611_1534238_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
WP_005012067.1|1534234_1535185_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019249265.1|1535283_1536396_-	DUF1513 domain-containing protein	NA	NA	NA	NA	NA
WP_019248041.1|1536385_1537387_-	imelysin family protein	NA	NA	NA	NA	NA
WP_019247498.1|1537492_1539004_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_023853587.1|1539000_1540305_-	imelysin	NA	NA	NA	NA	NA
WP_010930431.1|1540416_1540977_-	membrane protein	NA	NA	NA	NA	NA
WP_010930432.1|1541244_1541799_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	32.0	1.7e-15
WP_010930433.1|1542254_1542470_-	dodecin domain-containing protein	NA	NA	NA	NA	NA
WP_033446228.1|1542724_1545322_+	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	22.6	1.5e-21
WP_010930435.1|1545318_1546506_+	cupin	NA	NA	NA	NA	NA
WP_010930436.1|1547163_1547778_+	serotype 3 fimbrial subunit	NA	NA	NA	NA	NA
WP_023994740.1|1547866_1548988_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA	NA
WP_033446216.1|1549005_1549911_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_005012067.1|1550803_1551754_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930439.1|1551935_1552688_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
WP_003811112.1|1552756_1553416_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
WP_003811113.1|1553412_1554141_+	glutamine ABC transporter ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	39.3	3.3e-35
WP_010930440.1|1554153_1556433_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	32.1	5.9e-06
WP_010930441.1|1556457_1556661_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_010930442.1|1556702_1557335_-	guanylate kinase	NA	A0A218KC48	Bacillus_phage	33.9	2.4e-13
WP_010930443.1|1557470_1558388_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_010930444.1|1558384_1559098_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_003811135.1|1559335_1560106_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003811137.1|1560110_1560710_-	C40 family peptidase	NA	A0A0A8WF62	Clostridium_phage	41.6	1.4e-20
WP_003811138.1|1560954_1562445_+	AMP nucleosidase	NA	NA	NA	NA	NA
WP_010926696.1|1562503_1562788_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003811148.1|1563353_1564280_-	YicC family protein	NA	NA	NA	NA	NA
WP_003811149.1|1564416_1565157_+	ribonuclease PH	NA	NA	NA	NA	NA
WP_010930446.1|1565323_1566700_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003811152.1|1566881_1567787_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930448.1|1569438_1571241_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_003811159.1|1571358_1572009_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA	NA
WP_005012808.1|1572107_1573058_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930450.1|1573079_1574300_+	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
WP_003811164.1|1574485_1575898_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_003811167.1|1575961_1577029_+	PAS domain-containing protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
WP_010930451.1|1577028_1578516_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
WP_010930452.1|1578525_1579470_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811176.1|1579629_1580328_+	pirin family protein	NA	NA	NA	NA	NA
WP_010930453.1|1580405_1581311_+	pirin family protein	NA	NA	NA	NA	NA
WP_005012067.1|1581330_1582281_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
NZ_CP017123	Bordetella pertussis strain J153 chromosome, complete genome	4106365	1618230	1682067	4106365	transposase	Brazilian_cedratvirus(25.0%)	53	NA	NA
WP_005013747.1|1618230_1619181_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930486.1|1619239_1620013_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486074.1|1620005_1621562_+	LTA synthase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1621558_1622509_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810741.1|1623835_1624438_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810743.1|1624677_1625379_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003816696.1|1625372_1626155_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_005012808.1|1626339_1627290_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930483.1|1627388_1628126_-	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_010926609.1|1628315_1629074_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930482.1|1629120_1630110_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930481.1|1630287_1631256_-	transporter	NA	NA	NA	NA	NA
WP_010930480.1|1632795_1633764_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930479.1|1633772_1634714_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930478.1|1635187_1636198_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930477.1|1636188_1637703_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930476.1|1637699_1639046_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930475.1|1639048_1640083_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_023852967.1|1640132_1641758_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_005012067.1|1642310_1643261_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930487.1|1643365_1644313_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247865.1|1644366_1646181_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_010930489.1|1646173_1646848_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_023995112.1|1646977_1650052_+	autotransporter SphB2	NA	NA	NA	NA	NA
WP_019247905.1|1650065_1650365_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930492.1|1650679_1651303_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_010930493.1|1651546_1652416_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010930494.1|1652393_1653338_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247909.1|1653423_1654350_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247910.1|1654462_1655242_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930497.1|1655232_1656429_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010930498.1|1656459_1657410_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_010930499.1|1657631_1658321_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930500.1|1658385_1659141_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930501.1|1659192_1660185_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930502.1|1660194_1661148_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811538.1|1661263_1662226_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019249376.1|1663627_1664056_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1664052_1665003_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930503.1|1665296_1666019_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
WP_010930504.1|1666457_1667645_-	MFS transporter	NA	NA	NA	NA	NA
WP_010930505.1|1667648_1667999_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930506.1|1669748_1670720_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930507.1|1670733_1671447_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930508.1|1671451_1672369_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811452.1|1672475_1672772_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930509.1|1674978_1677912_+	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA	NA
WP_003810969.1|1677911_1678256_+	Na+/H+ antiporter subunit C	NA	NA	NA	NA	NA
WP_004568496.1|1678252_1679881_+	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA	NA
WP_010930510.1|1679877_1680357_+	Na+/H+ antiporter subunit E	NA	NA	NA	NA	NA
WP_033446177.1|1680356_1680638_+	K+/H+ antiporter subunit F	NA	NA	NA	NA	NA
WP_010930511.1|1680634_1680961_+	cation:proton antiporter	NA	NA	NA	NA	NA
WP_005013747.1|1681116_1682067_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
NZ_CP017123	Bordetella pertussis strain J153 chromosome, complete genome	4106365	1831586	1890856	4106365	transposase,tRNA,protease	Klosneuvirus(40.0%)	51	NA	NA
WP_005013747.1|1831586_1832537_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930573.1|1832661_1833471_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010929577.1|1833671_1834622_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930574.1|1835895_1837113_+	four-carbon acid sugar kinase family protein	NA	NA	NA	NA	NA
WP_003818670.1|1838169_1839072_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930576.1|1839148_1840021_+	MOSC domain-containing protein	NA	NA	NA	NA	NA
WP_003818672.1|1840151_1840520_+	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
WP_010930577.1|1840577_1841624_+	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
WP_010930578.1|1841819_1843076_+	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_003810623.1|1843080_1844418_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_003818676.1|1844567_1845524_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247555.1|1845626_1846559_-	acyclic terpene utilization AtuA family protein	NA	NA	NA	NA	NA
WP_019247554.1|1846674_1846995_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247553.1|1846987_1847347_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930581.1|1847394_1848969_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810637.1|1849021_1849966_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930582.1|1849983_1850814_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930583.1|1850806_1852441_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	8.2e-18
WP_010930584.1|1852437_1853793_+	amidase	NA	NA	NA	NA	NA
WP_010930585.1|1854699_1856277_+	lipoprotein	NA	NA	NA	NA	NA
WP_010930586.1|1856280_1857555_+	type 4b pilus protein PilO2	NA	NA	NA	NA	NA
WP_010930587.1|1857652_1858027_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930588.1|1859742_1860876_+	general secretion pathway protein	NA	NA	NA	NA	NA
WP_003810661.1|1860913_1861519_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_010930589.1|1861515_1862334_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930590.1|1862405_1865030_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
WP_004568544.1|1865016_1865271_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_010930591.1|1865337_1865919_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010926757.1|1866222_1866483_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_014905757.1|1866648_1867272_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_003816734.1|1867271_1868045_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_010930593.1|1868041_1869250_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_010930594.1|1869275_1869749_-	RidA family protein	NA	NA	NA	NA	NA
WP_010930048.1|1869822_1870773_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879566.1|1870871_1871822_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930796.1|1871920_1873270_-	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_023852900.1|1874035_1874791_+	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_010930794.1|1874883_1877766_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
WP_003810689.1|1878088_1878514_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
WP_004568542.1|1878541_1879690_+	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_003810693.1|1879686_1880193_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_033446257.1|1880208_1881495_+	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_033446258.1|1881544_1882840_+|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930791.1|1882841_1883480_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_023852925.1|1883485_1884643_+	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_003810703.1|1884669_1886025_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_010930790.1|1886028_1887099_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
WP_003810707.1|1887237_1887474_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_010930789.1|1887561_1888668_+	GTPase HflX	NA	NA	NA	NA	NA
WP_010930788.1|1888633_1889938_+|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_010930787.1|1889956_1890856_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
>prophage 19
NZ_CP017123	Bordetella pertussis strain J153 chromosome, complete genome	4106365	1901096	1945419	4106365	transposase	Staphylococcus_phage(25.0%)	44	NA	NA
WP_005013747.1|1901096_1902047_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|1902145_1903096_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930782.1|1903295_1904381_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_003810400.1|1904396_1905158_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930781.1|1905154_1906078_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.6	1.6e-23
WP_019248115.1|1906176_1906701_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930779.1|1906709_1907453_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_010930778.1|1907548_1907788_-	membrane protein	NA	NA	NA	NA	NA
WP_010930777.1|1907801_1907954_-	lipoprotein	NA	NA	NA	NA	NA
WP_010930776.1|1908039_1909530_-	cytochrome c oxidase accessory protein CcoG	NA	NA	NA	NA	NA
WP_010930775.1|1909621_1910560_-	cytochrome-c oxidase, cbb3-type subunit III	NA	NA	NA	NA	NA
WP_003818560.1|1910556_1910733_-	cytochrome oxidase	NA	NA	NA	NA	NA
WP_003810383.1|1910735_1911398_-	cytochrome-c oxidase, cbb3-type subunit II	NA	NA	NA	NA	NA
WP_003810379.1|1913019_1913163_-	cbb3-type cytochrome oxidase assembly protein CcoS	NA	NA	NA	NA	NA
WP_010930774.1|1913159_1914134_-	membrane protein	NA	NA	NA	NA	NA
WP_005012067.1|1914300_1915251_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930773.1|1915247_1916522_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
WP_010930772.1|1916625_1917819_+	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
WP_010930771.1|1917815_1918469_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930770.1|1918465_1919902_+	dethiobiotin synthase	NA	NA	NA	NA	NA
WP_010930769.1|1919889_1920249_+	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_162268681.1|1921063_1921204_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1921221_1922172_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930768.1|1923217_1925083_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930767.1|1925340_1926861_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_003816959.1|1926948_1927599_-	flavodoxin family protein	NA	NA	NA	NA	NA
WP_010930766.1|1928547_1929843_+	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_010930765.1|1929864_1930749_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930764.1|1930847_1931723_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_003816964.1|1931712_1932069_-	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
WP_010930763.1|1932199_1933174_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003812228.1|1933303_1933483_-	DUF3008 family protein	NA	NA	NA	NA	NA
WP_029443822.1|1933580_1934105_+	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_010930761.1|1934115_1934952_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816971.1|1935064_1935436_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930760.1|1935432_1935984_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_003816975.1|1935999_1937691_-	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
WP_003816977.1|1937739_1938420_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014905663.1|1938667_1939132_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930758.1|1939301_1940231_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_019247659.1|1940243_1940891_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023997035.1|1940964_1942782_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
WP_005012067.1|1942865_1943816_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|1944468_1945419_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
NZ_CP017123	Bordetella pertussis strain J153 chromosome, complete genome	4106365	2171087	2228366	4106365	transposase,tRNA	Synechococcus_phage(14.29%)	49	NA	NA
WP_005012067.1|2171087_2172038_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879626.1|2172136_2174131_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.3	4.4e-21
WP_010930543.1|2174190_2175156_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
WP_010930542.1|2175145_2178007_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
WP_010930541.1|2178009_2178516_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
WP_010930540.1|2178620_2179829_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	30.0	3.8e-36
WP_033446178.1|2179830_2180769_-	membrane protein	NA	NA	NA	NA	NA
WP_010930538.1|2180930_2181404_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|2181400_2182351_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004566334.1|2182461_2182902_-	DUF937 domain-containing protein	NA	NA	NA	NA	NA
WP_010930537.1|2183030_2184260_-	lytic murein transglycosylase	NA	NA	NA	NA	NA
WP_004566336.1|2184298_2185120_-	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_029443743.1|2185173_2186325_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930535.1|2186416_2186905_-	DUF1854 domain-containing protein	NA	NA	NA	NA	NA
WP_019247811.1|2189455_2192005_+	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_010930533.1|2192075_2194649_+	cyanophycin synthetase	NA	NA	NA	NA	NA
WP_003813568.1|2194914_2195115_+	CsbD family protein	NA	NA	NA	NA	NA
WP_003813570.1|2195146_2195308_+	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
WP_003813572.1|2195365_2195704_+	BON domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|2195852_2196803_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247882.1|2197577_2198246_+	arylesterase	NA	NA	NA	NA	NA
WP_010930531.1|2198227_2200183_-	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_004568486.1|2200425_2201175_+	glycerophosphodiester phosphodiesterase	NA	A0A2H4PGQ5	Escherichia_phage	27.8	1.5e-14
WP_003816518.1|2201187_2202051_+	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
WP_003816520.1|2202054_2203470_-	dihydrolipoyl dehydrogenase	NA	NA	NA	NA	NA
WP_010930530.1|2203603_2204332_-	redoxin family protein	NA	A0A1D8KSL1	Synechococcus_phage	56.8	9.6e-43
WP_003811035.1|2204470_2204671_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_003816523.1|2204846_2205245_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003816525.1|2205268_2206669_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	26.5	7.3e-31
WP_010930529.1|2206787_2207540_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003816527.1|2207828_2208506_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248494.1|2208532_2209312_-	3'-5' exonuclease	NA	NA	NA	NA	NA
WP_003811022.1|2209308_2210193_-	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A292GJG6	Xanthomonas_phage	49.5	4.6e-15
WP_019247478.1|2210210_2210990_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	46.9	4.8e-32
WP_010930526.1|2210974_2211733_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.2	1.4e-68
WP_023852762.1|2211870_2212506_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_010930525.1|2212773_2213790_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930524.1|2213887_2214928_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	51.3	6.1e-91
WP_003811011.1|2215062_2216355_+	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	36.0	1.7e-66
WP_003811007.1|2217714_2218098_+	thioredoxin family protein	NA	V9SJ74	Achromobacter_phage	25.8	8.1e-09
WP_010930523.1|2218115_2218703_-	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	35.8	4.7e-16
WP_010930048.1|2218740_2219691_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930801.1|2219789_2220350_-	diaminobutyrate acetyltransferase	NA	NA	NA	NA	NA
WP_010930802.1|2220346_2220892_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003818661.1|2221087_2222116_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930803.1|2222156_2223497_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	22.8	8.8e-18
WP_003818658.1|2223605_2224610_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010930804.1|2224716_2227317_+	TRAP transporter fused permease subunit	NA	NA	NA	NA	NA
WP_010930522.1|2227415_2228366_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
NZ_CP017123	Bordetella pertussis strain J153 chromosome, complete genome	4106365	2474949	2533192	4106365	transposase,tRNA	Planktothrix_phage(28.57%)	52	NA	NA
WP_005012067.1|2474949_2475900_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930388.1|2476379_2477036_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA	NA
WP_010930387.1|2477050_2478718_-	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_010930386.1|2478720_2479350_-	TRAP transporter small permease subunit	NA	NA	NA	NA	NA
WP_014486072.1|2479561_2480656_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930384.1|2480800_2481613_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_010930383.1|2481616_2483200_-	membrane protein	NA	NA	NA	NA	NA
WP_010930382.1|2483370_2484501_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930381.1|2484687_2485764_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
WP_010930380.1|2485845_2486496_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_010930379.1|2486510_2487914_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
WP_004567445.1|2488197_2489016_-	solute-binding protein	NA	NA	NA	NA	NA
WP_010930378.1|2489012_2489717_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.0	2.6e-13
WP_010930377.1|2490616_2491732_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_004567447.1|2491765_2492140_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930376.1|2492162_2493320_-	formate dehydrogenase subunit gamma	NA	NA	NA	NA	NA
WP_003812666.1|2493332_2493566_-	lipoprotein	NA	NA	NA	NA	NA
WP_019247523.1|2494200_2497170_-	formate dehydrogenase subunit alpha	NA	NA	NA	NA	NA
WP_023853518.1|2497184_2497394_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248667.1|2497545_2498175_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023994978.1|2498171_2500229_-	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_010930372.1|2500285_2500966_-	DUF3306 domain-containing protein	NA	NA	NA	NA	NA
WP_003820494.1|2500962_2501523_-	DUF3305 domain-containing protein	NA	NA	NA	NA	NA
WP_004567450.1|2501529_2502627_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010930371.1|2502779_2503373_+	molybdenum cofactor guanylyltransferase MobA	NA	NA	NA	NA	NA
WP_010930370.1|2503369_2504662_+	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_003812685.1|2504675_2505218_+	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA	NA
WP_010930369.1|2505227_2506064_-	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003820487.1|2506097_2507159_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	42.8	2.9e-80
WP_019247210.1|2507200_2508253_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_019247209.1|2508268_2508571_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|2508712_2509663_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930368.1|2509841_2511536_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003809599.1|2511532_2512618_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	6.4e-27
WP_010930367.1|2512665_2513565_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003809593.1|2513575_2514220_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_010930366.1|2515241_2518484_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_023852833.1|2518494_2519649_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.4	3.3e-53
WP_010930364.1|2519875_2520838_+	transaldolase	NA	H6WFR1	Cyanophage	29.2	7.5e-11
WP_076879624.1|2520936_2521887_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930363.1|2521985_2522936_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811741.1|2523693_2524131_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003811743.1|2524176_2525070_-	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003811746.1|2525117_2526290_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003811748.1|2526286_2527441_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003811750.1|2527637_2527988_-	RnfH family protein	NA	NA	NA	NA	NA
WP_003811752.1|2527977_2528412_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_010930800.1|2528428_2529379_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811754.1|2529526_2529994_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
WP_010930360.1|2529974_2531132_-	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
WP_003811759.1|2531197_2532124_-	paraslipin	NA	NA	NA	NA	NA
WP_005012067.1|2532241_2533192_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
NZ_CP017123	Bordetella pertussis strain J153 chromosome, complete genome	4106365	2575470	2641970	4106365	transposase	uncultured_Caudovirales_phage(40.0%)	56	NA	NA
WP_005012067.1|2575470_2576421_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811850.1|2576790_2577363_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA	NA
WP_003811852.1|2577365_2578376_+	flagellar motor switch protein FliM	NA	NA	NA	NA	NA
WP_010930335.1|2578368_2578869_+	flagellar motor switch protein FliN	NA	NA	NA	NA	NA
WP_003811855.1|2578879_2579221_+	flagellar biosynthetic protein FliO	NA	NA	NA	NA	NA
WP_010930334.1|2579289_2580024_+	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA	NA
WP_003811859.1|2580040_2580310_+	flagellar biosynthesis protein FliQ	NA	NA	NA	NA	NA
WP_010930333.1|2580332_2581121_+	flagellar biosynthetic protein FliR	NA	NA	NA	NA	NA
WP_010929632.1|2581167_2582184_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_014486070.1|2582400_2583843_-	PAS domain-containing protein	NA	A0A1B0V854	Salmonella_phage	41.8	1.0e-35
WP_010930332.1|2584021_2585641_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	45.3	1.5e-08
WP_010930331.1|2585761_2587582_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	52.6	6.4e-11
WP_010930330.1|2587660_2589193_-	flagellar hook-associated protein 3	NA	NA	NA	NA	NA
WP_010930329.1|2589226_2590873_-	flagellar hook-associated protein FlgK	NA	NA	NA	NA	NA
WP_010930328.1|2590942_2591965_-	flagellar assembly peptidoglycan hydrolase FlgJ	NA	A0A088F6W1	Sulfitobacter_phage	31.4	1.9e-12
WP_010930327.1|2591982_2593116_-	flagellar basal body P-ring protein FlgI	NA	NA	NA	NA	NA
WP_010930326.1|2593118_2593808_-	flagellar basal body L-ring protein FlgH	NA	NA	NA	NA	NA
WP_010930325.1|2593807_2594593_-	flagellar basal-body rod protein FlgG	NA	NA	NA	NA	NA
WP_003817181.1|2594636_2595401_-	flagellar basal body rod protein FlgF	NA	NA	NA	NA	NA
WP_003817180.1|2595439_2596861_-	flagellar hook-basal body complex protein	NA	NA	NA	NA	NA
WP_010930324.1|2596926_2597631_-	flagellar basal body rod modification protein FlgD	NA	NA	NA	NA	NA
WP_003817176.1|2597678_2598098_-	flagellar basal body rod protein FlgC	NA	NA	NA	NA	NA
WP_010930323.1|2598110_2598518_-	flagellar basal body rod protein FlgB	NA	NA	NA	NA	NA
WP_010930322.1|2598701_2599412_+	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA	NA
WP_003817172.1|2599538_2599829_+	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA	NA
WP_003817170.1|2599846_2600329_+	flagellar protein FlgN	NA	NA	NA	NA	NA
WP_010930321.1|2604834_2605989_-	flagellar type III secretion system protein FlhB	NA	NA	NA	NA	NA
WP_010931363.1|2606294_2607311_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930319.1|2607557_2608346_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003812020.1|2608412_2609093_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812022.1|2609089_2609860_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.1	9.8e-30
WP_010930208.1|2609958_2610909_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811401.1|2610964_2611882_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
WP_003811400.1|2611892_2613071_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	NA	NA	NA	NA
WP_010930318.1|2613090_2614086_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811396.1|2615674_2616283_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_003811393.1|2616270_2617311_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811391.1|2617328_2618291_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811389.1|2618287_2619481_-	CoA transferase	NA	NA	NA	NA	NA
WP_010930317.1|2619477_2620275_-	citryl-CoA lyase	NA	NA	NA	NA	NA
WP_014486069.1|2620300_2621287_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930316.1|2621305_2623345_-	acetyl-CoA synthetase	NA	NA	NA	NA	NA
WP_010930315.1|2623546_2624227_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930314.1|2624240_2625152_-	CoA ester lyase	NA	NA	NA	NA	NA
WP_003811381.1|2625148_2625727_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930313.1|2625865_2626771_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930312.1|2626778_2630198_+	TM0106 family RecB-like putative nuclease	NA	NA	NA	NA	NA
WP_010930311.1|2630185_2632786_-	BP1344/BB2830 family autotransporter	NA	NA	NA	NA	NA
WP_003811375.1|2633741_2634374_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003811372.1|2634767_2635526_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003811370.1|2635522_2636725_+	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010930208.1|2636912_2637863_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930310.1|2638770_2639916_+	DUF3182 family protein	NA	NA	NA	NA	NA
WP_019247449.1|2639902_2640658_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_003811361.1|2640774_2640954_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930208.1|2641019_2641970_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
NZ_CP017123	Bordetella pertussis strain J153 chromosome, complete genome	4106365	2670085	2707497	4106365	transposase	Planktothrix_phage(33.33%)	39	NA	NA
WP_005012067.1|2670085_2671036_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|2671134_2672085_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811316.1|2672177_2672717_+	peroxiredoxin	NA	NA	NA	NA	NA
WP_023852799.1|2672823_2673168_-	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	58.4	3.0e-31
WP_010930298.1|2673225_2674674_-	CoA transferase	NA	NA	NA	NA	NA
WP_003811313.1|2674861_2675197_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_010930297.1|2676824_2678003_+	DUF1501 domain-containing protein	NA	NA	NA	NA	NA
WP_003811310.1|2678085_2678586_+	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	38.4	4.7e-25
WP_010930296.1|2678695_2679397_+	thiol:disulfide oxidoreductase	NA	NA	NA	NA	NA
WP_010930295.1|2679408_2679873_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_023852802.1|2679887_2680163_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003811306.1|2680159_2680936_+	lipoate--protein ligase family protein	NA	NA	NA	NA	NA
WP_010930294.1|2680964_2681792_+	DUF3298 domain-containing protein	NA	NA	NA	NA	NA
WP_010930293.1|2681917_2682388_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003811301.1|2682514_2683408_+	phosphatidylserine decarboxylase	NA	NA	NA	NA	NA
WP_010930292.1|2683455_2684637_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_003811298.1|2684649_2685465_-	exported protein	NA	NA	NA	NA	NA
WP_010930291.1|2685598_2686126_-	RES family NAD+ phosphorylase	NA	NA	NA	NA	NA
WP_003811295.1|2686122_2686620_-	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
WP_003811293.1|2686767_2687145_+	DUF423 domain-containing protein	NA	NA	NA	NA	NA
WP_010929584.1|2687366_2688317_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811244.1|2688415_2689027_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930290.1|2689261_2690389_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930289.1|2690499_2691588_-	sn-glycerol-3-phosphate import ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	31.2	2.2e-19
WP_003811259.1|2691640_2692492_-	sn-glycerol-3-phosphate ABC transporter permease UgpE	NA	NA	NA	NA	NA
WP_003811262.1|2692511_2693393_-	sn-glycerol-3-phosphate ABC transporter permease UgpA	NA	NA	NA	NA	NA
WP_010930288.1|2693569_2694883_-	sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB	NA	NA	NA	NA	NA
WP_003811267.1|2695093_2695927_+	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
WP_010930287.1|2695923_2696505_+	queuosine precursor transporter	NA	A0A2I7SAW6	Vibrio_phage	37.3	9.4e-17
WP_005015810.1|2696858_2697809_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930286.1|2697824_2698940_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003811272.1|2699042_2699969_+	high-affinity branched-chain amino acid ABC transporter permease LivH	NA	NA	NA	NA	NA
WP_010930285.1|2699968_2701207_+	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA	NA
WP_003811277.1|2701203_2701971_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.4	1.2e-14
WP_010930284.1|2701971_2702673_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.4	1.3e-17
WP_019247793.1|2702754_2703201_-	glutamate racemase	NA	NA	NA	NA	NA
WP_010930283.1|2704090_2704729_+	glutathione S-transferase	NA	NA	NA	NA	NA
WP_005012808.1|2705497_2706448_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012808.1|2706546_2707497_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
NZ_CP017123	Bordetella pertussis strain J153 chromosome, complete genome	4106365	2806624	2861141	4106365	transposase	Diachasmimorpha_longicaudata_entomopoxvirus(20.0%)	48	NA	NA
WP_076879566.1|2806624_2807575_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931071.1|2807903_2808509_+	fimbrial protein	NA	NA	NA	NA	NA
WP_010931072.1|2808562_2809876_-	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
WP_003813284.1|2809950_2810421_-	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA	NA
WP_010931073.1|2810420_2811209_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
WP_010931074.1|2811219_2812872_-	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA	NA
WP_010929591.1|2812959_2813910_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931075.1|2815071_2815578_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA	NA
WP_003813293.1|2815574_2816339_-	phenylacetate-CoA oxygenase subunit PaaC	NA	NA	NA	NA	NA
WP_010931076.1|2816354_2816639_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA	NA
WP_003813298.1|2816703_2817693_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA	NA
WP_010931077.1|2817864_2818794_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA	NA
WP_003813302.1|2818765_2819452_-	NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
WP_003813303.1|2819485_2820031_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	37.7	2.1e-26
WP_003813306.1|2820075_2821341_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003813309.1|2821337_2822240_+	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA	NA
WP_019247679.1|2823421_2824366_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931079.1|2824460_2825978_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931080.1|2826019_2827648_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_003811986.1|2827755_2828637_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931081.1|2831749_2832124_+	endonuclease	NA	F4YXR7	Roseobacter_phage	54.4	2.1e-25
WP_003812004.1|2832148_2832487_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931082.1|2832530_2834165_-	NAD+ synthase	NA	A0A2L0UZF5	Agrobacterium_phage	36.6	8.3e-87
WP_010931083.1|2834203_2835550_-	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_003812010.1|2835657_2837079_+	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_010931084.1|2837148_2837733_-	nitroreductase	NA	NA	NA	NA	NA
WP_005012067.1|2837835_2838786_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931085.1|2838920_2840027_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010931086.1|2840037_2841135_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
WP_010931087.1|2841279_2842485_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_010931088.1|2842491_2843013_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA	NA
WP_023853551.1|2843009_2843492_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA	NA
WP_003819740.1|2843497_2843749_-	MoaD/ThiS family protein	NA	NA	NA	NA	NA
WP_003819741.1|2843729_2844215_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
WP_010931090.1|2844350_2847812_+	DUF748 domain-containing protein	NA	NA	NA	NA	NA
WP_010931091.1|2847829_2848714_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
WP_010931092.1|2848723_2849155_-	lipoprotein	NA	NA	NA	NA	NA
WP_003809348.1|2849401_2849905_+	peroxiredoxin	NA	M1I839	Pelagibacter_phage	44.1	1.8e-24
WP_010931094.1|2849982_2851383_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931095.1|2851457_2852333_-	membrane protein	NA	NA	NA	NA	NA
WP_023853546.1|2852329_2853337_-	biotin synthase BioB	NA	NA	NA	NA	NA
WP_010931097.1|2853804_2854110_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003819753.1|2854200_2854791_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930525.1|2854981_2855998_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010931098.1|2856189_2858526_-	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	42.8	3.2e-124
WP_003812014.1|2858608_2859043_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_023995489.1|2859141_2860092_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2860190_2861141_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 25
NZ_CP017123	Bordetella pertussis strain J153 chromosome, complete genome	4106365	2869166	2925950	4106365	transposase,protease	uncultured_Mediterranean_phage(28.57%)	41	NA	NA
WP_005012067.1|2869166_2870117_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931105.1|2871823_2872090_-	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_003812839.1|2872797_2873136_+	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_077069211.1|2874464_2877449_-	autotransporter BapC	NA	NA	NA	NA	NA
WP_010931107.1|2877687_2878290_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931108.1|2878386_2879676_+	MFS transporter	NA	NA	NA	NA	NA
WP_003812846.1|2879733_2880465_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931109.1|2880461_2881265_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812851.1|2881261_2882350_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|2882346_2883276_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812857.1|2883424_2884570_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930800.1|2884591_2885542_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931110.1|2885872_2889694_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010931111.1|2889850_2890519_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_014905522.1|2890523_2892197_-	MCE family protein	NA	NA	NA	NA	NA
WP_003820402.1|2892215_2893535_-	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_010931114.1|2893539_2895855_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.1e-164
WP_010931115.1|2895910_2898079_-	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_023853340.1|2898075_2903256_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_003820400.1|2903354_2903669_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_003812875.1|2903896_2904142_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820399.1|2904236_2904755_+	hypothetical protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_010931117.1|2904854_2906060_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_019247560.1|2906175_2907573_-	chloride channel protein	NA	NA	NA	NA	NA
WP_010931119.1|2907689_2908268_-	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_010931120.1|2908340_2909732_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_005012067.1|2909899_2910850_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812889.1|2911130_2911751_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_010931122.1|2911747_2912161_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_010931123.1|2912157_2913201_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_003812895.1|2913256_2913445_+	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931124.1|2913454_2914219_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_010931125.1|2914309_2914966_+	adenylate kinase	NA	NA	NA	NA	NA
WP_010931126.1|2915057_2915816_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931127.1|2915841_2917443_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931128.1|2917643_2918648_+	DUF4880 domain-containing protein	NA	NA	NA	NA	NA
WP_003812908.1|2918748_2919012_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931129.1|2919129_2919906_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_005012067.1|2920496_2921447_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931130.1|2923830_2924943_-	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_005012808.1|2924999_2925950_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
NZ_CP017123	Bordetella pertussis strain J153 chromosome, complete genome	4106365	2956336	3000027	4106365	transposase	Planktothrix_phage(33.33%)	40	NA	NA
WP_005012067.1|2956336_2957287_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852715.1|2957407_2958304_-	inositol monophosphatase	NA	NA	NA	NA	NA
WP_003814547.1|2960581_2962807_+	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_003814544.1|2962971_2964060_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_019247918.1|2964016_2964670_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931144.1|2964717_2965515_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930176.1|2966046_2966997_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994659.1|2967077_2968226_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|2968282_2969233_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814535.1|2969331_2969637_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_003820797.1|2969665_2970100_-	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_010931147.1|2970101_2971346_-	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003820799.1|2971342_2972053_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_033446288.1|2972067_2972979_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931149.1|2973341_2973746_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247890.1|2973742_2974201_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247891.1|2974207_2975116_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931150.1|2975112_2975979_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_003814524.1|2975965_2976793_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003820806.1|2976803_2977931_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_023852748.1|2979008_2980247_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931152.1|2980288_2981551_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010931153.1|2981557_2982310_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_019248355.1|2982361_2982547_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003820813.1|2982822_2983287_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_003820814.1|2983318_2983978_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_010931154.1|2984122_2986231_+	AsmA family protein	NA	NA	NA	NA	NA
WP_023852714.1|2986227_2987178_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931155.1|2987281_2987902_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003820818.1|2988005_2988746_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019248356.1|2989880_2991005_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247402.1|2991050_2991419_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2991660_2992611_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247492.1|2993646_2994189_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023998107.1|2994386_2994557_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2994574_2995525_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931157.1|2995521_2996430_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815281.1|2996556_2997393_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	33.3	1.6e-33
WP_010931158.1|2997905_2999015_+	porin	NA	NA	NA	NA	NA
WP_005012067.1|2999076_3000027_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 27
NZ_CP017123	Bordetella pertussis strain J153 chromosome, complete genome	4106365	3090636	3152472	4106365	transposase,tRNA,protease	Clostridium_phage(14.29%)	60	NA	NA
WP_005012067.1|3090636_3091587_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809257.1|3091685_3092489_-	anti-sigma factor	NA	NA	NA	NA	NA
WP_004568255.1|3092485_3093013_-	RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_003809253.1|3093063_3093432_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003809252.1|3093632_3094115_-	YajQ family cyclic di-GMP-binding protein	NA	NA	NA	NA	NA
WP_003819714.1|3094245_3094698_+	membrane protein	NA	NA	NA	NA	NA
WP_003819713.1|3094705_3095119_-	VOC family protein	NA	NA	NA	NA	NA
WP_023853532.1|3095240_3095915_-	peptidoglycan DD-metalloendopeptidase family protein	NA	I3PV79	Clostridium_phage	30.0	2.7e-07
WP_033446283.1|3096033_3097359_+	chromate efflux transporter	NA	NA	NA	NA	NA
WP_010931201.1|3097361_3098831_-	peptidase	NA	NA	NA	NA	NA
WP_010931202.1|3098842_3101041_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_004568261.1|3101203_3101641_-	DUF2946 domain-containing protein	NA	NA	NA	NA	NA
WP_010931203.1|3101942_3102239_+	DUF2282 domain-containing protein	NA	NA	NA	NA	NA
WP_023853526.1|3102250_3103120_+	DUF692 domain-containing protein	NA	NA	NA	NA	NA
WP_010931205.1|3103134_3103890_+	DUF2063 domain-containing protein	NA	NA	NA	NA	NA
WP_010931206.1|3103893_3104391_+	DoxX family protein	NA	NA	NA	NA	NA
WP_003809223.1|3105984_3106332_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003809222.1|3106452_3106800_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_003809221.1|3106799_3107411_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_010931208.1|3107414_3109394_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_004568266.1|3109397_3110312_-	ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_003809217.1|3110520_3111075_-	response regulator	NA	NA	NA	NA	NA
WP_019248645.1|3111071_3112283_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_023998300.1|3112477_3113386_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_010931212.1|3113623_3114490_-	pirin family protein	NA	NA	NA	NA	NA
WP_010931213.1|3115248_3116055_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931214.1|3116108_3117467_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931215.1|3117463_3118654_-	CoA transferase	NA	NA	NA	NA	NA
WP_003819684.1|3118711_3119623_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931216.1|3119646_3120636_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931217.1|3120660_3121128_-	acyl dehydratase	NA	NA	NA	NA	NA
WP_019247777.1|3121141_3121603_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_005015810.1|3122610_3123561_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122802.1|3123706_3124831_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	33.3	3.8e-38
WP_023853315.1|3125036_3125600_+	isochorismatase family protein	NA	NA	NA	NA	NA
WP_003814871.1|3126594_3127077_-	transcriptional repressor NrdR	NA	NA	NA	NA	NA
WP_003814873.1|3127234_3128482_-	serine hydroxymethyltransferase	NA	A0A219YCZ0	Aeromonas_phage	52.7	1.1e-99
WP_003820605.1|3128702_3129359_-	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA	NA
WP_003814877.1|3129394_3130624_-|tRNA	tyrosine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010929591.1|3130891_3131842_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931221.1|3131933_3133349_+	M23 family metallopeptidase	NA	A8ATH6	Listeria_phage	46.9	1.9e-18
WP_010931222.1|3133354_3134491_+	anhydro-N-acetylmuramic acid kinase	NA	NA	NA	NA	NA
WP_003814883.1|3134560_3134932_-	iron-sulfur cluster insertion protein ErpA	NA	A0A2H4N7M3	Lake_Baikal_phage	56.9	4.7e-30
WP_010931223.1|3135019_3135766_-	membrane protein	NA	NA	NA	NA	NA
WP_003820599.1|3135802_3136867_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA	NA
WP_010931224.1|3137055_3137448_-	30S ribosomal protein S9	NA	NA	NA	NA	NA
WP_010927106.1|3137457_3137886_-	50S ribosomal protein L13	NA	NA	NA	NA	NA
WP_004567739.1|3138181_3139279_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_004567741.1|3139620_3140985_-|protease	metalloprotease PmbA	protease	NA	NA	NA	NA
WP_023853313.1|3141043_3141595_+	ribosome-associated protein	NA	NA	NA	NA	NA
WP_010931226.1|3141608_3142283_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010931227.1|3143539_3144349_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	37.9	2.6e-33
WP_010931228.1|3144351_3145188_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003820594.1|3145202_3145895_+	cysteine hydrolase	NA	NA	NA	NA	NA
WP_003820593.1|3145906_3146296_-	VOC family protein	NA	NA	NA	NA	NA
WP_003820592.1|3146401_3147790_-	ATP-dependent RNA helicase DbpA	NA	A0A0N9Q9J4	Chrysochromulina_ericina_virus	33.5	4.6e-54
WP_010931229.1|3147906_3149403_-	membrane protein	NA	NA	NA	NA	NA
WP_010931230.1|3149699_3150374_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|3150472_3151423_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|3151521_3152472_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 29
NZ_CP017123	Bordetella pertussis strain J153 chromosome, complete genome	4106365	3381021	3445954	4106365	transposase,tRNA	Staphylococcus_phage(20.0%)	55	NA	NA
WP_023995489.1|3381021_3381972_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931336.1|3382376_3383021_-	urease accessory protein UreG	NA	NA	NA	NA	NA
WP_019247677.1|3383045_3383630_-	urease accessory protein UreF	NA	NA	NA	NA	NA
WP_014905506.1|3383730_3384348_-	urease accessory protein UreE	NA	NA	NA	NA	NA
WP_010931337.1|3384350_3386066_-	urease subunit alpha	NA	NA	NA	NA	NA
WP_010931338.1|3386062_3386371_-	urease subunit beta	NA	NA	NA	NA	NA
WP_003814828.1|3386387_3387005_-	HupE/UreJ family protein	NA	NA	NA	NA	NA
WP_010931340.1|3387049_3387352_-	urease subunit gamma	NA	NA	NA	NA	NA
WP_003814832.1|3387452_3388307_-	urease accessory protein UreD	NA	NA	NA	NA	NA
WP_124740609.1|3388494_3388719_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929281.1|3388888_3389161_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_010929282.1|3389578_3389986_-	GFA family protein	NA	NA	NA	NA	NA
WP_010931341.1|3390355_3391150_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010927102.1|3391250_3392486_+	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003814852.1|3392554_3393571_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931342.1|3393582_3394959_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003814856.1|3394955_3396152_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814858.1|3396148_3397687_-	SpoVR family protein	NA	NA	NA	NA	NA
WP_010931343.1|3397683_3398943_-	YeaH/YhbH family protein	NA	NA	NA	NA	NA
WP_005012067.1|3400883_3401834_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931344.1|3402600_3403695_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247312.1|3403687_3405022_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_003808193.1|3404975_3405659_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_024000003.1|3405684_3406848_-	acyl-CoA dehydrogenase C-terminal domain protein	NA	NA	NA	NA	NA
WP_004566224.1|3406844_3407846_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931346.1|3407845_3408718_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931347.1|3408714_3409464_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931348.1|3409460_3410252_-	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931349.1|3410248_3411388_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_047122778.1|3411663_3412449_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486103.1|3412482_3413265_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_010931351.1|3413268_3413658_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931352.1|3414797_3415661_+	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931353.1|3415696_3416785_+	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_019247959.1|3418084_3421063_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003818344.1|3421989_3422868_+	fatty acid desaturase	NA	NA	NA	NA	NA
WP_005013747.1|3424816_3425767_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931354.1|3425763_3426231_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_010931355.1|3426273_3427044_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_010927090.1|3427064_3427865_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931356.1|3427875_3429285_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_003814739.1|3429379_3430165_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931561.1|3430404_3431421_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814742.1|3431528_3431921_-	OsmC family protein	NA	NA	NA	NA	NA
WP_010931357.1|3432058_3432739_+	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_023994844.1|3432743_3433715_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930179.1|3433810_3434761_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814239.1|3436265_3436967_+	response regulator	NA	W8CYM9	Bacillus_phage	36.6	5.6e-32
WP_010927010.1|3436966_3438391_+	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_010931361.1|3439460_3440801_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_003820957.1|3440916_3442680_+|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
WP_010931362.1|3442791_3443670_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003814250.1|3443782_3444598_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_003814252.1|3444601_3444853_+	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_010929632.1|3444937_3445954_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 30
NZ_CP017123	Bordetella pertussis strain J153 chromosome, complete genome	4106365	3463698	3516103	4106365	transposase,tRNA	Acinetobacter_phage(37.5%)	47	NA	NA
WP_010931363.1|3463698_3464715_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010927020.1|3464810_3465521_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931368.1|3465517_3466507_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931369.1|3466602_3468234_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931370.1|3468236_3468974_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247745.1|3469129_3470002_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_023852703.1|3470351_3471491_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814300.1|3471487_3472147_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_003814302.1|3472218_3472851_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_010931372.1|3472880_3473399_+	flavin reductase family protein	NA	NA	NA	NA	NA
WP_010931373.1|3473409_3474519_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003814312.1|3474565_3475420_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931374.1|3475421_3476324_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3477546_3478497_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997720.1|3480251_3481241_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931375.1|3481416_3482205_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_003817833.1|3482201_3483233_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_003815390.1|3483251_3483815_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_010931376.1|3483870_3485391_-	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_010931377.1|3485654_3486359_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_023852620.1|3486366_3487095_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_003815381.1|3487209_3487584_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003815379.1|3487626_3488916_+	murein transglycosylase A	NA	NA	NA	NA	NA
WP_010931378.1|3488912_3490082_+	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_010931379.1|3490078_3490918_+	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931380.1|3490977_3491913_+	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_010929591.1|3491925_3492876_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931381.1|3492974_3493937_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_003817821.1|3493968_3494328_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931382.1|3494452_3495355_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_010931383.1|3495356_3497129_-	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_003815367.1|3497163_3497940_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_023852617.1|3499263_3500214_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003815365.1|3501065_3501386_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003815364.1|3501458_3502340_+	F0F1 ATP synthase subunit A	NA	NA	NA	NA	NA
WP_003815363.1|3502456_3502699_+	F0F1 ATP synthase subunit C	NA	NA	NA	NA	NA
WP_010931385.1|3502836_3503307_+	F0F1 ATP synthase subunit B	NA	NA	NA	NA	NA
WP_003815348.1|3503319_3503859_+	F0F1 ATP synthase subunit delta	NA	NA	NA	NA	NA
WP_010931386.1|3503893_3505435_+	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA	NA
WP_003817813.1|3505533_3506439_+	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA	NA
WP_010931387.1|3506481_3507882_+	F0F1 ATP synthase subunit beta	NA	NA	NA	NA	NA
WP_003815341.1|3507891_3508314_+	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA	NA
WP_010931388.1|3508496_3509381_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931389.1|3509456_3510533_+	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
WP_019247688.1|3510839_3512942_+	primosomal protein N'	NA	NA	NA	NA	NA
WP_010931391.1|3512984_3515054_+	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	37.3	2.6e-101
WP_005012808.1|3515152_3516103_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 31
NZ_CP017123	Bordetella pertussis strain J153 chromosome, complete genome	4106365	3533221	3587022	4106365	transposase,tRNA	Catovirus(11.11%)	46	NA	NA
WP_010931400.1|3533221_3534172_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486105.1|3534512_3535463_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|3535561_3536512_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443756.1|3536808_3537306_+	cupredoxin family protein	NA	NA	NA	NA	NA
WP_010931403.1|3537348_3539124_+	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
WP_010931404.1|3539131_3539998_+	copper resistance protein B	NA	NA	NA	NA	NA
WP_019249391.1|3540004_3540739_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931406.1|3541908_3542703_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815296.1|3542992_3543583_+	cysteine dioxygenase	NA	NA	NA	NA	NA
WP_010931407.1|3543616_3544945_-	amidase	NA	NA	NA	NA	NA
WP_010931408.1|3545019_3546165_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014905478.1|3546276_3547275_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446233.1|3547237_3547672_+	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
WP_010929974.1|3549188_3550073_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929973.1|3550069_3551275_-	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010929972.1|3551271_3552132_-	endonuclease	NA	NA	NA	NA	NA
WP_003807038.1|3552244_3554035_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
WP_033446243.1|3554075_3554720_-	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	8.5e-11
WP_010929971.1|3554741_3555050_-	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929970.1|3555215_3556502_-	membrane protein	NA	NA	NA	NA	NA
WP_010929969.1|3557935_3558886_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929968.1|3560837_3562052_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
WP_003815171.1|3562157_3563147_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
WP_003815172.1|3563143_3563752_+	HAD-IIIA family hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
WP_010929967.1|3563764_3564394_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_003815175.1|3564390_3565011_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_003815177.1|3565042_3565834_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
WP_010929966.1|3566685_3567141_+	PTS transporter subunit EIIA	NA	NA	NA	NA	NA
WP_010929965.1|3567159_3568086_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_010929964.1|3568139_3569426_-	cytochrome c	NA	NA	NA	NA	NA
WP_003815183.1|3570356_3571229_+	RNase adapter RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
WP_010929963.1|3571225_3572176_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
WP_005012067.1|3572274_3573225_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_020699695.1|3573329_3573560_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247263.1|3573686_3574076_-	SRPBCC family protein	NA	NA	NA	NA	NA
WP_010929962.1|3574092_3576474_-	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_023853194.1|3576466_3577843_-	FAD binding domain in molybdopterin dehydrogenase	NA	A0A0P0IVM8	Acinetobacter_phage	37.3	2.4e-18
WP_010929960.1|3577858_3578854_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003819054.1|3578872_3579865_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807624.1|3580105_3580666_-	UbiX family flavin prenyltransferase	NA	NA	NA	NA	NA
WP_010929959.1|3580670_3580997_-	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA	NA
WP_010929958.1|3581033_3581846_-	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_003807618.1|3581856_3582939_-	peptide chain release factor 1	NA	A0A0S4KWG0	Pseudomonas_phage	40.7	3.3e-07
WP_010929957.1|3583025_3584300_-|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
WP_010929956.1|3585022_3585973_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|3586071_3587022_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 33
NZ_CP017123	Bordetella pertussis strain J153 chromosome, complete genome	4106365	4005434	4070346	4106365	transposase	Planktothrix_phage(40.0%)	59	NA	NA
WP_039249574.1|4005434_4005920_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_153302797.1|4006008_4006146_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931647.1|4006138_4007119_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019248461.1|4007385_4008195_+	pertussis toxin ADP-ribosyltransferase subunit PtxA	NA	NA	NA	NA	NA
WP_014906114.1|4008234_4008915_+	pertussis toxin binding subunit PtxB	NA	NA	NA	NA	NA
WP_010929491.1|4008908_4009367_+	pertussis toxin subunit 4	NA	NA	NA	NA	NA
WP_023853616.1|4009378_4009741_+	pertussis toxin binding subunit PtxD	NA	NA	NA	NA	NA
WP_010931651.1|4009823_4010507_+	pertussis toxin binding subunit PtxE	NA	NA	NA	NA	NA
WP_010929493.1|4010562_4010871_+	type IV secretion system protein PtlA	NA	NA	NA	NA	NA
WP_010929494.1|4010889_4011204_+	type IV secretion system protein PtlB	NA	NA	NA	NA	NA
WP_010931652.1|4011200_4013675_+	type IV secretion system protein PtlC	NA	NA	NA	NA	NA
WP_010931653.1|4013682_4015074_+	type IV secretion system protein PtlD	NA	NA	NA	NA	NA
WP_010929497.1|4015070_4015256_+	type IV secretion system protein PtlI	NA	NA	NA	NA	NA
WP_010929498.1|4015234_4015936_+	type IV secretion system peptidoglycanase PtlE	NA	NA	NA	NA	NA
WP_010931654.1|4015932_4016754_+	type IV secretion system protein PtlF	NA	NA	NA	NA	NA
WP_010931655.1|4016734_4017859_+	type IV secretion system protein PtlG	NA	NA	NA	NA	NA
WP_010929500.1|4017851_4018871_+	type IV secretion system protein PtlH	NA	NA	NA	NA	NA
WP_010931656.1|4019076_4019967_-	DMT family transporter	NA	NA	NA	NA	NA
WP_010929501.1|4020211_4021003_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003815873.1|4021085_4021460_+	DUF1232 domain-containing protein	NA	NA	NA	NA	NA
WP_010931658.1|4021437_4022847_+	DUF2868 domain-containing protein	NA	NA	NA	NA	NA
WP_003815876.1|4022839_4024222_+	GTPase/DUF3482 domain-containing protein	NA	A0A0R6PHS5	Moraxella_phage	38.9	9.9e-57
WP_003815878.1|4024556_4026161_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931659.1|4026238_4027210_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931660.1|4027220_4028147_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931661.1|4028537_4029488_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931662.1|4029657_4030884_+	bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA	NA	NA	NA	NA
WP_010931663.1|4031083_4031950_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_003815027.1|4031942_4032905_+	Nudix family hydrolase	NA	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	53.4	1.9e-06
WP_010927663.1|4033005_4033956_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|4034054_4035005_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|4035103_4036054_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994937.1|4036050_4037544_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_003815032.1|4037540_4040648_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931665.1|4040644_4043713_-	MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931666.1|4043709_4044960_-	MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_023853184.1|4045140_4045893_-	cell division protein ZapD	NA	NA	NA	NA	NA
WP_010931667.1|4045934_4046579_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
WP_010931668.1|4046587_4047568_-	prepilin peptidase	NA	NA	NA	NA	NA
WP_003815047.1|4047667_4048411_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815049.1|4048493_4048841_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003815051.1|4048938_4049781_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_003815053.1|4049825_4050713_-	segregation/condensation protein A	NA	NA	NA	NA	NA
WP_003815055.1|4050739_4050928_-	DUF3460 family protein	NA	NA	NA	NA	NA
WP_010931669.1|4051025_4052483_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_010931670.1|4052469_4053996_+	glycerol kinase GlpK	NA	NA	NA	NA	NA
WP_003815061.1|4054014_4054482_-	membrane protein	NA	NA	NA	NA	NA
WP_010931671.1|4054481_4055504_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003815064.1|4055624_4056365_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	4.4e-35
WP_003815066.1|4056419_4057520_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815068.1|4057521_4058712_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815070.1|4058831_4059848_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	42.1	1.0e-71
WP_003815073.1|4060166_4060838_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	38.2	9.5e-29
WP_010927126.1|4060834_4061743_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_010931672.1|4061954_4062602_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA	NA
WP_033446142.1|4066462_4067530_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
WP_003815084.1|4067540_4068350_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_023999981.1|4068439_4069213_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_010930363.1|4069395_4070346_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
