assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002287725.2_ASM228772v2	NZ_CP023316	Pseudomonas aeruginosa strain PPF-1 chromosome, complete genome	1	405301-405414	1	CRISPRCasFinder	no		cas3,csa3,RT,DEDDh,PD-DExK,DinG,WYL,TnsE_C	Orphan	GGCCAAAGAACTGGAGGGCAAGGTATGA	28	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,RT,DEDDh,PD-DExK,DinG,WYL,TnsE_C	NA,NA|168aa|down_2|NZ_CP023316.1_409986_410490_-,NA|251aa|down_5|NZ_CP023316.1_412243_412996_-,NA|185aa|down_7|NZ_CP023316.1_413764_414319_-	NA|293aa|up_9|NZ_CP023316.1_392149_393028_-	TIGR03381, putative_carbon-nitrogen_hydrolase, N-carbamoylputrescine amidase	NA|222aa|up_8|NZ_CP023316.1_393190_393856_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|354aa|up_7|NZ_CP023316.1_393916_394978_-	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|459aa|up_6|NZ_CP023316.1_395233_396610_-	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|251aa|up_5|NZ_CP023316.1_396888_397641_+	pfam07722, Peptidase_C26, Peptidase C26	NA|453aa|up_4|NZ_CP023316.1_397681_399040_+	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|457aa|up_3|NZ_CP023316.1_399105_400476_+	PRK07480, PRK07480, putative aminotransferase; Validated	NA|368aa|up_2|NZ_CP023316.1_400591_401695_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|366aa|up_1|NZ_CP023316.1_402113_403211_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|385aa|up_0|NZ_CP023316.1_403265_404420_+	PRK11607, potG, putrescine ABC transporter ATP-binding subunit PotG	NA|796aa|down_0|NZ_CP023316.1_406457_408845_-	COG2366, COG2366, Protein related to penicillin acylase [General function prediction only]	NA|351aa|down_1|NZ_CP023316.1_408955_410008_+	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term	NA|168aa|down_2|NZ_CP023316.1_409986_410490_-	NA	NA|204aa|down_3|NZ_CP023316.1_410594_411206_-	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs	NA|340aa|down_4|NZ_CP023316.1_411204_412224_+	COG2267, PldB, Lysophospholipase [Lipid metabolism]	NA|251aa|down_5|NZ_CP023316.1_412243_412996_-	NA	NA|233aa|down_6|NZ_CP023316.1_413044_413743_+	COG3751, EGL-9, Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones]	NA|185aa|down_7|NZ_CP023316.1_413764_414319_-	NA	NA|165aa|down_8|NZ_CP023316.1_414584_415079_+	COG1683, COG1683, Uncharacterized conserved protein [Function unknown]	NA|231aa|down_9|NZ_CP023316.1_415083_415776_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]
GCF_002287725.2_ASM228772v2	NZ_CP023316	Pseudomonas aeruginosa strain PPF-1 chromosome, complete genome	2	3461909-3462003	2	CRISPRCasFinder	no		cas3,csa3,RT,DEDDh,PD-DExK,DinG,WYL,TnsE_C	Orphan	GGCGGGGGAGATGGGAAGTGCGATCCTGC	29	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,RT,DEDDh,PD-DExK,DinG,WYL,TnsE_C	NA|107aa|up_6|NZ_CP023316.1_3455795_3456116_-,NA|111aa|up_4|NZ_CP023316.1_3457632_3457965_-,NA|77aa|up_0|NZ_CP023316.1_3460759_3460990_+,NA|111aa|down_2|NZ_CP023316.1_3464565_3464898_-,NA|101aa|down_5|NZ_CP023316.1_3466929_3467232_+,NA|74aa|down_6|NZ_CP023316.1_3467264_3467486_-	NA|240aa|up_9|NZ_CP023316.1_3453614_3454334_-	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown]	NA|247aa|up_8|NZ_CP023316.1_3454548_3455289_-	cd05233, SDR_c, classical (c) SDRs	NA|121aa|up_7|NZ_CP023316.1_3455338_3455701_-	TIGR03789, pdsO, proteobacterial sortase system peptidoglycan-associated protein	NA|107aa|up_6|NZ_CP023316.1_3455795_3456116_-	NA	NA|357aa|up_5|NZ_CP023316.1_3456074_3457145_+	cd16283, RomA-like_MBL-fold, Enterobacter cloacae RomA and related proteins; MBL-fold metallo hydrolase domain	NA|111aa|up_4|NZ_CP023316.1_3457632_3457965_-	NA	NA|119aa|up_3|NZ_CP023316.1_3458071_3458428_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|411aa|up_2|NZ_CP023316.1_3458562_3459795_+	PHA00360, II, replication initiation protein	NA|115aa|up_1|NZ_CP023316.1_3460142_3460487_+	pfam17426, Putative_G5P, Putative Gamma DNA binding protein G5P	NA|77aa|up_0|NZ_CP023316.1_3460759_3460990_+	NA	NA|104aa|down_0|NZ_CP023316.1_3462522_3462834_+	pfam10734, DUF2523, Protein of unknown function (DUF2523)	NA|427aa|down_1|NZ_CP023316.1_3462851_3464132_+	pfam05707, Zot, Zonular occludens toxin (Zot)	NA|111aa|down_2|NZ_CP023316.1_3464565_3464898_-	NA	NA|119aa|down_3|NZ_CP023316.1_3465004_3465361_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|418aa|down_4|NZ_CP023316.1_3465495_3466749_+	PHA00360, II, replication initiation protein	NA|101aa|down_5|NZ_CP023316.1_3466929_3467232_+	NA	NA|74aa|down_6|NZ_CP023316.1_3467264_3467486_-	NA	NA|334aa|down_7|NZ_CP023316.1_3467524_3468526_-	pfam11740, KfrA_N, Plasmid replication region DNA-binding N-term	NA|324aa|down_8|NZ_CP023316.1_3468706_3469678_+	cd00799, INT_Cre_C, C-terminal catalytic domain of Cre recombinase (also called integrase)	NA|248aa|down_9|NZ_CP023316.1_3469707_3470451_+	pfam07505, DUF5131, Protein of unknown function (DUF5131)
GCF_002287725.2_ASM228772v2	NZ_CP023316	Pseudomonas aeruginosa strain PPF-1 chromosome, complete genome	3	3482653-3482747	3	CRISPRCasFinder	no		cas3,csa3,RT,DEDDh,PD-DExK,DinG,WYL,TnsE_C	Orphan	GGCGGGGGAGATGGGAAGTGCGATCCTGC	29	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,RT,DEDDh,PD-DExK,DinG,WYL,TnsE_C	NA|191aa|up_7|NZ_CP023316.1_3473625_3474198_+,NA|121aa|up_3|NZ_CP023316.1_3476998_3477361_-,NA|77aa|up_0|NZ_CP023316.1_3481503_3481734_+,NA|181aa|down_3|NZ_CP023316.1_3486889_3487432_+	NA|439aa|up_9|NZ_CP023316.1_3470472_3471789_+	TIGR04474, conserved_hypothetical_protein, three-Cys-motif partner protein	NA|470aa|up_8|NZ_CP023316.1_3472200_3473610_+	COG5310, COG5310, Homospermidine synthase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|191aa|up_7|NZ_CP023316.1_3473625_3474198_+	NA	NA|339aa|up_6|NZ_CP023316.1_3474232_3475249_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|302aa|up_5|NZ_CP023316.1_3475451_3476357_+	COG2510, COG2510, Predicted membrane protein [Function unknown]	NA|155aa|up_4|NZ_CP023316.1_3476364_3476829_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|121aa|up_3|NZ_CP023316.1_3476998_3477361_-	NA	NA|1005aa|up_2|NZ_CP023316.1_3477357_3480372_-	pfam01526, DDE_Tnp_Tn3, Tn3 transposase DDE domain	NA|115aa|up_1|NZ_CP023316.1_3480886_3481231_+	pfam17426, Putative_G5P, Putative Gamma DNA binding protein G5P	NA|77aa|up_0|NZ_CP023316.1_3481503_3481734_+	NA	NA|104aa|down_0|NZ_CP023316.1_3483266_3483578_+	pfam10734, DUF2523, Protein of unknown function (DUF2523)	NA|427aa|down_1|NZ_CP023316.1_3483595_3484876_+	pfam05707, Zot, Zonular occludens toxin (Zot)	NA|360aa|down_2|NZ_CP023316.1_3485044_3486124_+	cd07197, nitrilase, Nitrilase superfamily, including nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes	NA|181aa|down_3|NZ_CP023316.1_3486889_3487432_+	NA	NA|418aa|down_4|NZ_CP023316.1_3487454_3488708_-	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]	NA|289aa|down_5|NZ_CP023316.1_3488947_3489814_+	pfam05721, PhyH, Phytanoyl-CoA dioxygenase (PhyH)	NA|321aa|down_6|NZ_CP023316.1_3489898_3490861_-	COG4447, COG4447, Uncharacterized protein related to plant photosystem II stability/assembly factor [General function prediction only]	NA|801aa|down_7|NZ_CP023316.1_3490871_3493274_-	COG1033, COG1033, Predicted exporters of the RND superfamily [General function prediction only]	NA|529aa|down_8|NZ_CP023316.1_3493282_3494869_-	pfam06980, DUF1302, Protein of unknown function (DUF1302)	NA|475aa|down_9|NZ_CP023316.1_3494952_3496377_-	pfam07044, DUF1329, Protein of unknown function (DUF1329)
GCF_002287725.2_ASM228772v2	NZ_CP023316	Pseudomonas aeruginosa strain PPF-1 chromosome, complete genome	4	6082674-6082766	4	CRISPRCasFinder	no		cas3,csa3,RT,DEDDh,PD-DExK,DinG,WYL,TnsE_C	Orphan	GCCGACAACGGCAGCGAGCAGACC	24	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,RT,DEDDh,PD-DExK,DinG,WYL,TnsE_C	NA|249aa|up_9|NZ_CP023316.1_6073155_6073902_+,NA|208aa|down_2|NZ_CP023316.1_6084362_6084986_-	NA|249aa|up_9|NZ_CP023316.1_6073155_6073902_+	NA	NA|288aa|up_8|NZ_CP023316.1_6073908_6074772_-	COG2513, PrpB, PEP phosphonomutase and related enzymes [Carbohydrate transport and metabolism]	NA|422aa|up_7|NZ_CP023316.1_6074977_6076243_+	cd10231, YegD_like, Escherichia coli YegD, a putative chaperone protein, and related proteins	NA|139aa|up_6|NZ_CP023316.1_6076417_6076834_-	PRK11505, PRK11505, phosphate starvation-inducible protein PsiF	NA|180aa|up_5|NZ_CP023316.1_6076988_6077528_+	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown]	NA|115aa|up_4|NZ_CP023316.1_6077616_6077961_+	PRK11251, PRK11251, osmotically-inducible lipoprotein OsmE	NA|136aa|up_3|NZ_CP023316.1_6078004_6078412_-	pfam07498, Rho_N, Rho termination factor, N-terminal domain	NA|271aa|up_2|NZ_CP023316.1_6078558_6079371_+	COG3708, COG3708, Uncharacterized protein conserved in bacteria [Function unknown]	NA|690aa|up_1|NZ_CP023316.1_6079372_6081442_-	COG2982, AsmA, Uncharacterized protein involved in outer membrane biogenesis [Cell envelope biogenesis, outer membrane]	NA|178aa|up_0|NZ_CP023316.1_6081737_6082271_+	COG2193, Bfr, Bacterioferritin (cytochrome b1) [Inorganic ion transport and metabolism]	NA|256aa|down_0|NZ_CP023316.1_6082930_6083698_-	cd02108, bact_SO_family_Moco, bacterial subgroup of the sulfite oxidase (SO) family of molybdopterin binding domains	NA|205aa|down_1|NZ_CP023316.1_6083694_6084309_-	COG4117, COG4117, Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) [Energy production and conversion]	NA|208aa|down_2|NZ_CP023316.1_6084362_6084986_-	NA	NA|230aa|down_3|NZ_CP023316.1_6085123_6085813_+	TIGR01387, Transcriptional_regulatory_protein_PcoR, heavy metal response regulator	NA|464aa|down_4|NZ_CP023316.1_6085791_6087183_+	TIGR01386, Probable_sensor_protein_PcoS, heavy metal sensor kinase	NA|439aa|down_5|NZ_CP023316.1_6087173_6088490_-	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily	NA|371aa|down_6|NZ_CP023316.1_6088709_6089822_-	COG3239, DesA, Fatty acid desaturase [Lipid metabolism]	NA|367aa|down_7|NZ_CP023316.1_6089818_6090919_-	cd06216, FNR_iron_sulfur_binding_2, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain	NA|210aa|down_8|NZ_CP023316.1_6091077_6091707_+	PRK11202, PRK11202, HTH-type transcriptional repressor FabR	NA|168aa|down_9|NZ_CP023316.1_6091936_6092440_+	PRK13261, ureE, urease accessory protein UreE; Provisional
