The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP016768	Candidatus Nanopelagicus limnes isolate MMS-21-122 chromosome, complete genome	1238108	349882	357845	1238108	protease,tRNA	Agrobacterium_phage(33.33%)	8	NA	NA
WP_095680928.1|349882_350500_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	50.8	9.6e-44
WP_095680927.1|350496_351135_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	45.2	2.3e-40
WP_095680926.1|351149_351677_+	TIGR00645 family protein	NA	K4K6D8	Caulobacter_phage	29.9	1.4e-14
WP_095680925.1|351783_353082_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	59.2	8.0e-141
WP_095680924.1|353094_355692_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	41.5	3.8e-158
WP_095680923.1|355692_357039_+	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_095680922.1|357041_357389_+	DUF4233 domain-containing protein	NA	NA	NA	NA	NA
WP_095680921.1|357425_357845_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	45.5	1.5e-27
>prophage 2
NZ_CP016768	Candidatus Nanopelagicus limnes isolate MMS-21-122 chromosome, complete genome	1238108	581027	588186	1238108		Cedratvirus(16.67%)	8	NA	NA
WP_095680723.1|581027_581780_+	Fe-S cluster assembly ATPase SufC	NA	A0A1M7XV31	Cedratvirus	30.0	1.9e-09
WP_095680722.1|581783_583031_+	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	44.9	4.4e-104
WP_095680721.1|583030_583465_+	SUF system NifU family Fe-S cluster assembly protein	NA	V5R992	Mycobacterium_phage	40.7	5.9e-16
WP_095680720.1|583474_583786_+	metal-sulfur cluster assembly factor	NA	NA	NA	NA	NA
WP_095680719.1|583823_585689_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.7	2.1e-49
WP_095680718.1|585680_585953_-	DUF3099 domain-containing protein	NA	NA	NA	NA	NA
WP_095680717.1|586043_587300_-	nitrate reductase	NA	Q9KX94	Enterobacteria_phage	47.1	8.9e-89
WP_095680716.1|587625_588186_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	33.1	2.1e-13
>prophage 3
NZ_CP016768	Candidatus Nanopelagicus limnes isolate MMS-21-122 chromosome, complete genome	1238108	1058306	1067104	1238108	tRNA	uncultured_virus(33.33%)	8	NA	NA
WP_095680270.1|1058306_1060520_-	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	38.9	3.6e-125
WP_095681225.1|1060578_1061304_+	PIG-L family deacetylase	NA	NA	NA	NA	NA
WP_095680269.1|1061300_1061960_-	peptidylprolyl isomerase	NA	A0A1V0SCU1	Indivirus	36.6	5.1e-11
WP_095680268.1|1062054_1063164_-	GuaB3 family IMP dehydrogenase-related protein	NA	A0A1V0SHK8	Klosneuvirus	31.5	2.3e-11
WP_095680267.1|1063203_1063956_-	ROK family protein	NA	NA	NA	NA	NA
WP_095680266.1|1064013_1065648_-	chaperonin GroEL	NA	A0A219YK78	uncultured_virus	55.5	5.7e-152
WP_095680265.1|1065650_1065947_-	co-chaperone GroES	NA	A0A221S3C8	uncultured_virus	52.7	1.0e-19
WP_095680264.1|1066078_1067104_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	42.2	7.1e-60
>prophage 4
NZ_CP016768	Candidatus Nanopelagicus limnes isolate MMS-21-122 chromosome, complete genome	1238108	1174318	1182268	1238108	protease,tRNA	Pandoravirus(16.67%)	8	NA	NA
WP_095680166.1|1174318_1175116_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.4	1.1e-20
WP_095680165.1|1175121_1175742_-	GTP cyclohydrolase I FolE	NA	A0A1W7AF02	Streptococcus_virus	53.6	6.2e-43
WP_095680164.1|1175734_1177804_-|protease	ATP-dependent zinc metalloprotease FtsH	protease	G8DDJ2	Micromonas_pusilla_virus	42.5	6.0e-106
WP_095680163.1|1177842_1178394_-	hypoxanthine phosphoribosyltransferase	NA	A0A2K9L634	Tupanvirus	24.9	1.8e-09
WP_095680162.1|1178402_1179365_-|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	NA	NA	NA	NA
WP_095680161.1|1179375_1180569_-	C40 family peptidase	NA	A0A2L1IW19	Streptomyces_phage	37.1	3.2e-11
WP_095680160.1|1180568_1181360_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_095680159.1|1181362_1182268_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	38.5	2.0e-37
