assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002288155.1_ASM228815v1	NZ_CP021200	Taylorella equigenitalis strain 79-1587 chromosome, complete genome	1	225725-227879	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas3,cas2,cas1,cas4,cas7,cas8c,cas5	cas3,cas2,cas1,cas4,cas7,cas8c,cas5,DEDDh	Type I-U, Type I-U?,Type I-C	GTTTAAACACACAGCCACGCGTACGTGGCTGA,GTTTAAACACACAGCCACGCGTACGTGGCTGA,GTTTAAACACACAGCCACGCGTACGTGGCTGA	32,32,32	0	0	NA	NA	NA:NA:NA	32,32,31	32	TypeI-U,TypeI-U?,TypeI-C	cas3,cas2,cas1,cas4,cas7,cas8c,cas5,DEDDh	NA,NA	NA|189aa|up_9|NZ_CP021200.1_212188_212755_-	PRK05456, PRK05456, ATP-dependent protease subunit HslV	NA|447aa|up_8|NZ_CP021200.1_212885_214226_+	COG4222, COG4222, Uncharacterized protein conserved in bacteria [Function unknown]	NA|162aa|up_7|NZ_CP021200.1_214294_214780_-	TIGR02420, RNA_polymerase-binding_transcription_factor_DksA, RNA polymerase-binding protein DksA	NA|341aa|up_6|NZ_CP021200.1_215150_216173_+	pfam02954, HTH_8, Bacterial regulatory protein, Fis family	NA|357aa|up_5|NZ_CP021200.1_216217_217288_+	PRK00115, hemE, uroporphyrinogen decarboxylase; Validated	NA|681aa|up_4|NZ_CP021200.1_217516_219559_+	PRK05580, PRK05580, primosome assembly protein PriA; Validated	NA|242aa|up_3|NZ_CP021200.1_219566_220292_+	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|171aa|up_2|NZ_CP021200.1_220414_220927_+	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|549aa|up_1|NZ_CP021200.1_221219_222866_+	PRK15452, PRK15452, putative protease; Provisional	cas3|797aa|up_0|NZ_CP021200.1_222868_225259_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas2|98aa|down_0|NZ_CP021200.1_228052_228346_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|338aa|down_1|NZ_CP021200.1_228348_229362_-	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas4|210aa|down_2|NZ_CP021200.1_229345_229975_-	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas7|283aa|down_3|NZ_CP021200.1_229964_230813_-	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas8c|631aa|down_4|NZ_CP021200.1_230825_232718_-	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	cas5|239aa|down_5|NZ_CP021200.1_232720_233437_-	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	NA|954aa|down_6|NZ_CP021200.1_234298_237160_+	COG1112, COG1112, Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair]	NA|545aa|down_7|NZ_CP021200.1_237400_239035_+	PRK15104, PRK15104, oligopeptide ABC transporter substrate-binding protein OppA; Provisional	NA|307aa|down_8|NZ_CP021200.1_239096_240017_+	PRK09471, oppB, oligopeptide ABC transporter permease OppB	NA|306aa|down_9|NZ_CP021200.1_240026_240944_+	PRK15406, PRK15406, oligopeptide ABC transporter permease OppC; Provisional
GCF_002288155.1_ASM228815v1	NZ_CP021200	Taylorella equigenitalis strain 79-1587 chromosome, complete genome	2	982479-982587	2	CRISPRCasFinder	no	DEDDh	cas3,cas2,cas1,cas4,cas7,cas8c,cas5,DEDDh	Unclear	AGTTTTTGGGCAGGTGTTTGAGTTT	25	0	0	NA	NA	NA	1	1	Orphan	cas3,cas2,cas1,cas4,cas7,cas8c,cas5,DEDDh	NA|227aa|up_5|NZ_CP021200.1_977078_977759_-,NA|206aa|up_4|NZ_CP021200.1_977764_978382_-,NA|103aa|up_2|NZ_CP021200.1_979649_979958_-,NA|125aa|down_2|NZ_CP021200.1_985270_985645_-,NA|110aa|down_3|NZ_CP021200.1_985782_986112_-,NA|128aa|down_5|NZ_CP021200.1_986803_987187_+	NA|282aa|up_9|NZ_CP021200.1_972140_972986_-	COG4965, TadB, Flp pilus assembly protein TadB [Intracellular trafficking and secretion]	NA|530aa|up_8|NZ_CP021200.1_972989_974579_-	COG4962, CpaF, Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion]	NA|509aa|up_7|NZ_CP021200.1_974575_976102_-	COG4964, CpaC, Flp pilus assembly protein, secretin CpaC [Intracellular trafficking and secretion]	NA|326aa|up_6|NZ_CP021200.1_976091_977069_-	TIGR03177, pilus_cpaB, Flp pilus assembly protein CpaB	NA|227aa|up_5|NZ_CP021200.1_977078_977759_-	NA	NA|206aa|up_4|NZ_CP021200.1_977764_978382_-	NA	NA|425aa|up_3|NZ_CP021200.1_978372_979647_-	pfam13400, Tad, Putative Flp pilus-assembly TadE/G-like	NA|103aa|up_2|NZ_CP021200.1_979649_979958_-	NA	NA|226aa|up_1|NZ_CP021200.1_980045_980723_-	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional	NA|412aa|up_0|NZ_CP021200.1_981053_982289_+	PRK09692, PRK09692, integrase; Provisional	NA|372aa|down_0|NZ_CP021200.1_982608_983724_-	pfam13481, AAA_25, AAA domain	NA|492aa|down_1|NZ_CP021200.1_983804_985280_-	pfam03432, Relaxase, Relaxase/Mobilisation nuclease domain	NA|125aa|down_2|NZ_CP021200.1_985270_985645_-	NA	NA|110aa|down_3|NZ_CP021200.1_985782_986112_-	NA	NA|79aa|down_4|NZ_CP021200.1_986104_986341_-	COG3311, AlpA, Predicted transcriptional regulator [Transcription]	NA|128aa|down_5|NZ_CP021200.1_986803_987187_+	NA	NA|205aa|down_6|NZ_CP021200.1_988103_988718_+	sd00010, SLR, Sel1-like repeat	NA|903aa|down_7|NZ_CP021200.1_988726_991435_-	PRK05658, PRK05658, RNA polymerase sigma factor RpoD; Validated	NA|595aa|down_8|NZ_CP021200.1_991486_993271_-	PRK05667, dnaG, DNA primase; Validated	NA|71aa|down_9|NZ_CP021200.1_993343_993556_-	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed
GCF_002288155.1_ASM228815v1	NZ_CP021200	Taylorella equigenitalis strain 79-1587 chromosome, complete genome	3	987248-987336	3	CRISPRCasFinder	no	DEDDh	cas3,cas2,cas1,cas4,cas7,cas8c,cas5,DEDDh	Unclear	AAACTCAAACACCTGCCCAAAAACT	25	0	0	NA	NA	NA	1	1	Orphan	cas3,cas2,cas1,cas4,cas7,cas8c,cas5,DEDDh	NA|103aa|up_8|NZ_CP021200.1_979649_979958_-,NA|125aa|up_3|NZ_CP021200.1_985270_985645_-,NA|110aa|up_2|NZ_CP021200.1_985782_986112_-,NA|128aa|up_0|NZ_CP021200.1_986803_987187_+,NA	NA|425aa|up_9|NZ_CP021200.1_978372_979647_-	pfam13400, Tad, Putative Flp pilus-assembly TadE/G-like	NA|103aa|up_8|NZ_CP021200.1_979649_979958_-	NA	NA|226aa|up_7|NZ_CP021200.1_980045_980723_-	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional	NA|412aa|up_6|NZ_CP021200.1_981053_982289_+	PRK09692, PRK09692, integrase; Provisional	NA|372aa|up_5|NZ_CP021200.1_982608_983724_-	pfam13481, AAA_25, AAA domain	NA|492aa|up_4|NZ_CP021200.1_983804_985280_-	pfam03432, Relaxase, Relaxase/Mobilisation nuclease domain	NA|125aa|up_3|NZ_CP021200.1_985270_985645_-	NA	NA|110aa|up_2|NZ_CP021200.1_985782_986112_-	NA	NA|79aa|up_1|NZ_CP021200.1_986104_986341_-	COG3311, AlpA, Predicted transcriptional regulator [Transcription]	NA|128aa|up_0|NZ_CP021200.1_986803_987187_+	NA	NA|205aa|down_0|NZ_CP021200.1_988103_988718_+	sd00010, SLR, Sel1-like repeat	NA|903aa|down_1|NZ_CP021200.1_988726_991435_-	PRK05658, PRK05658, RNA polymerase sigma factor RpoD; Validated	NA|595aa|down_2|NZ_CP021200.1_991486_993271_-	PRK05667, dnaG, DNA primase; Validated	NA|71aa|down_3|NZ_CP021200.1_993343_993556_-	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed	NA|184aa|down_4|NZ_CP021200.1_993725_994277_-	COG2236, COG2236, Predicted phosphoribosyltransferases [General function prediction only]	NA|431aa|down_5|NZ_CP021200.1_994280_995573_-	PRK01117, PRK01117, adenylosuccinate synthetase; Provisional	NA|294aa|down_6|NZ_CP021200.1_995579_996461_-	cd03405, SPFH_HflC, High frequency of lysogenization C (HflC) family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily	NA|439aa|down_7|NZ_CP021200.1_996470_997787_-	cd03404, SPFH_HflK, High frequency of lysogenization K (HflK) family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily	NA|356aa|down_8|NZ_CP021200.1_997799_998867_-	TIGR03156, GTP_HflX, GTP-binding protein HflX	NA|92aa|down_9|NZ_CP021200.1_998915_999191_-	PRK00395, hfq, RNA-binding protein Hfq; Provisional
GCF_002288155.1_ASM228815v1	NZ_CP021200	Taylorella equigenitalis strain 79-1587 chromosome, complete genome	4	1224347-1224619	4	CRISPRCasFinder	no		cas3,cas2,cas1,cas4,cas7,cas8c,cas5,DEDDh	Orphan	GTGGCAGAACGGGTGGATTTGAGTCAAGACTTAGTAGAG	39	0	0	NA	NA	NA	3	3	Orphan	cas3,cas2,cas1,cas4,cas7,cas8c,cas5,DEDDh	NA|237aa|up_5|NZ_CP021200.1_1220245_1220956_+,NA|206aa|up_4|NZ_CP021200.1_1220946_1221564_+,NA|103aa|up_2|NZ_CP021200.1_1222442_1222751_+,NA|201aa|up_1|NZ_CP021200.1_1222762_1223365_+,NA|220aa|down_0|NZ_CP021200.1_1224828_1225488_+,NA|235aa|down_1|NZ_CP021200.1_1225573_1226278_+,NA|310aa|down_2|NZ_CP021200.1_1226274_1227204_+,NA|127aa|down_4|NZ_CP021200.1_1227516_1227897_+,NA|177aa|down_7|NZ_CP021200.1_1229682_1230213_+,NA|196aa|down_8|NZ_CP021200.1_1230264_1230852_+,NA|57aa|down_9|NZ_CP021200.1_1230989_1231160_+	NA|244aa|up_9|NZ_CP021200.1_1216348_1217080_+	cd16892, LT_VirB1-like, VirB1-like subfamily	NA|99aa|up_8|NZ_CP021200.1_1217190_1217487_+	PRK03427, PRK03427, cell division protein ZipA; Provisional	NA|142aa|up_7|NZ_CP021200.1_1217486_1217912_+	pfam05101, VirB3, Type IV secretory pathway, VirB3-like protein	NA|802aa|up_6|NZ_CP021200.1_1217811_1220217_+	TIGR00929, CAG_pathogenicity_island_protein_23, type IV secretion/conjugal transfer ATPase, VirB4 family	NA|237aa|up_5|NZ_CP021200.1_1220245_1220956_+	NA	NA|206aa|up_4|NZ_CP021200.1_1220946_1221564_+	NA	NA|266aa|up_3|NZ_CP021200.1_1221607_1222405_+	pfam10098, DUF2336, Uncharacterized protein conserved in bacteria (DUF2336)	NA|103aa|up_2|NZ_CP021200.1_1222442_1222751_+	NA	NA|201aa|up_1|NZ_CP021200.1_1222762_1223365_+	NA	NA|158aa|up_0|NZ_CP021200.1_1223718_1224192_+	pfam10098, DUF2336, Uncharacterized protein conserved in bacteria (DUF2336)	NA|220aa|down_0|NZ_CP021200.1_1224828_1225488_+	NA	NA|235aa|down_1|NZ_CP021200.1_1225573_1226278_+	NA	NA|310aa|down_2|NZ_CP021200.1_1226274_1227204_+	NA	NA|80aa|down_3|NZ_CP021200.1_1227246_1227486_+	pfam01816, LRV, Leucine rich repeat variant	NA|127aa|down_4|NZ_CP021200.1_1227516_1227897_+	NA	NA|210aa|down_5|NZ_CP021200.1_1227883_1228513_+	cd14262, VirB5_like, VirB5 protein family	NA|375aa|down_6|NZ_CP021200.1_1228521_1229646_+	pfam04610, TrbL, TrbL/VirB6 plasmid conjugal transfer protein	NA|177aa|down_7|NZ_CP021200.1_1229682_1230213_+	NA	NA|196aa|down_8|NZ_CP021200.1_1230264_1230852_+	NA	NA|57aa|down_9|NZ_CP021200.1_1230989_1231160_+	NA
