assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002327205.1_ASM232720v1	NZ_CP018630	Clostridium chauvoei strain 12S0467 chromosome, complete genome	1	589021-589096	1	CRISPRCasFinder	no		csx1,cas3,DinG,csa3,DEDDh,WYL,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2,cas3HD	Orphan	CGTGATTTAATTGCACGTCGTTGG	24	0	0	NA	NA	NA	1	1	Orphan	csx1,cas3,DinG,csa3,DEDDh,WYL,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2,cas3HD	NA|398aa|up_7|NZ_CP018630.1_580988_582182_-,NA|343aa|up_6|NZ_CP018630.1_582184_583213_-,NA|96aa|up_5|NZ_CP018630.1_583303_583591_-,NA|255aa|up_3|NZ_CP018630.1_585471_586236_+,NA|168aa|up_2|NZ_CP018630.1_586637_587141_+,NA|102aa|up_1|NZ_CP018630.1_587860_588166_-,NA|129aa|up_0|NZ_CP018630.1_588380_588767_-,NA|128aa|down_4|NZ_CP018630.1_594968_595352_-,NA|159aa|down_6|NZ_CP018630.1_599673_600150_+	NA|480aa|up_9|NZ_CP018630.1_578383_579823_-	pfam13610, DDE_Tnp_IS240, DDE domain	NA|231aa|up_8|NZ_CP018630.1_580299_580992_-	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|398aa|up_7|NZ_CP018630.1_580988_582182_-	NA	NA|343aa|up_6|NZ_CP018630.1_582184_583213_-	NA	NA|96aa|up_5|NZ_CP018630.1_583303_583591_-	NA	NA|405aa|up_4|NZ_CP018630.1_583858_585073_+	pfam13610, DDE_Tnp_IS240, DDE domain	NA|255aa|up_3|NZ_CP018630.1_585471_586236_+	NA	NA|168aa|up_2|NZ_CP018630.1_586637_587141_+	NA	NA|102aa|up_1|NZ_CP018630.1_587860_588166_-	NA	NA|129aa|up_0|NZ_CP018630.1_588380_588767_-	NA	NA|94aa|down_0|NZ_CP018630.1_589169_589451_+	pfam18813, PBECR4, phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease4	NA|320aa|down_1|NZ_CP018630.1_589735_590695_+	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism]	NA|319aa|down_2|NZ_CP018630.1_590723_591680_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|1044aa|down_3|NZ_CP018630.1_591806_594938_+	COG0383, AMS1, Alpha-mannosidase [Carbohydrate transport and metabolism]	NA|128aa|down_4|NZ_CP018630.1_594968_595352_-	NA	NA|482aa|down_5|NZ_CP018630.1_595618_597064_+	pfam12010, DUF3502, Domain of unknown function (DUF3502)	NA|159aa|down_6|NZ_CP018630.1_599673_600150_+	NA	NA|617aa|down_7|NZ_CP018630.1_600156_602007_+	cd06565, GH20_GcnA-like, Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins	NA|483aa|down_8|NZ_CP018630.1_602158_603607_+	pfam12010, DUF3502, Domain of unknown function (DUF3502)	NA|747aa|down_9|NZ_CP018630.1_603705_605946_+	pfam01055, Glyco_hydro_31, Glycosyl hydrolases family 31
GCF_002327205.1_ASM232720v1	NZ_CP018630	Clostridium chauvoei strain 12S0467 chromosome, complete genome	2	1310877-1312942	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	WYL,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2	csx1,cas3,DinG,csa3,DEDDh,WYL,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2,cas3HD	Type I-B	GATTAACATTAACATGAGATGTATTTAAAT,GATTAACATTAACATGAGATGTATTTAAAT,GATTAACATTAACATGAGATGTATTTAAAT	30,30,30	0	0	NA	NA	II-B:II-B:II-B	31,31,31	31	TypeI-B	csx1,cas3,DinG,csa3,DEDDh,WYL,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2,cas3HD	NA,NA|216aa|down_5|NZ_CP018630.1_1317193_1317841_+	NA|341aa|up_9|NZ_CP018630.1_1299274_1300297_+	cd10944, CE4_SmPgdA_like, Catalytic NodB homology domain of Streptococcus mutans polysaccharide deacetylase PgdA, Bacillus subtilis YheN, and similar proteins	NA|407aa|up_8|NZ_CP018630.1_1300404_1301625_+	PRK05469, PRK05469, tripeptide aminopeptidase PepT	WYL|67aa|up_7|NZ_CP018630.1_1301889_1302090_+	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	cas6|231aa|up_6|NZ_CP018630.1_1302134_1302827_+	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	cas8b1|578aa|up_5|NZ_CP018630.1_1302842_1304576_+	TIGR02591, cas_Csh1, CRISPR-associated protein Cas8b/Csh1, subtype I-B/HMARI	cas7b|316aa|up_4|NZ_CP018630.1_1304578_1305526_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas5|260aa|up_3|NZ_CP018630.1_1305528_1306308_+	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI	cas4|163aa|up_2|NZ_CP018630.1_1308920_1309409_+	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas1|333aa|up_1|NZ_CP018630.1_1309418_1310417_+	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1	cas2|97aa|up_0|NZ_CP018630.1_1310418_1310709_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|413aa|down_0|NZ_CP018630.1_1313050_1314289_+	pfam00872, Transposase_mut, Transposase, Mutator family	NA|54aa|down_1|NZ_CP018630.1_1315405_1315567_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|76aa|down_2|NZ_CP018630.1_1315512_1315740_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|80aa|down_3|NZ_CP018630.1_1315941_1316181_+	pfam08737, Rgp1, Rgp1	NA|179aa|down_4|NZ_CP018630.1_1316483_1317020_+	pfam16107, DUF4825, Domain of unknown function (DUF4825)	NA|216aa|down_5|NZ_CP018630.1_1317193_1317841_+	NA	NA|584aa|down_6|NZ_CP018630.1_1317905_1319657_+	pfam13320, DUF4091, Domain of unknown function (DUF4091)	NA|292aa|down_7|NZ_CP018630.1_1319869_1320745_+	COG4640, COG4640, Predicted membrane protein [Function unknown]	NA|377aa|down_8|NZ_CP018630.1_1320802_1321933_-	COG5316, COG5316, Uncharacterized conserved protein [Function unknown]	NA|263aa|down_9|NZ_CP018630.1_1322088_1322877_+	cd09083, EEP-1, Exonuclease-Endonuclease-Phosphatase domain; uncharacterized family 1
GCF_002327205.1_ASM232720v1	NZ_CP018630	Clostridium chauvoei strain 12S0467 chromosome, complete genome	3	1314506-1315196	2,3,2	PILER-CR,CRISPRCasFinder,CRT	no	WYL,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2	csx1,cas3,DinG,csa3,DEDDh,WYL,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2,cas3HD	Type I-B	GATTAACATTAACATGAGATGTATTTAAAT,GATTAACATTAACATGAGATGTATTTAAAT,GATTAACATTAACATGAGATGTATTTAAAT	30,30,30	0	0	NA	NA	II-B:II-B:II-B	10,10,10	10	TypeI-B	csx1,cas3,DinG,csa3,DEDDh,WYL,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2,cas3HD	NA,NA|216aa|down_4|NZ_CP018630.1_1317193_1317841_+,NA|113aa|down_9|NZ_CP018630.1_1322931_1323270_+	NA|407aa|up_9|NZ_CP018630.1_1300404_1301625_+	PRK05469, PRK05469, tripeptide aminopeptidase PepT	WYL|67aa|up_8|NZ_CP018630.1_1301889_1302090_+	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	cas6|231aa|up_7|NZ_CP018630.1_1302134_1302827_+	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	cas8b1|578aa|up_6|NZ_CP018630.1_1302842_1304576_+	TIGR02591, cas_Csh1, CRISPR-associated protein Cas8b/Csh1, subtype I-B/HMARI	cas7b|316aa|up_5|NZ_CP018630.1_1304578_1305526_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas5|260aa|up_4|NZ_CP018630.1_1305528_1306308_+	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI	cas4|163aa|up_3|NZ_CP018630.1_1308920_1309409_+	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas1|333aa|up_2|NZ_CP018630.1_1309418_1310417_+	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1	cas2|97aa|up_1|NZ_CP018630.1_1310418_1310709_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|413aa|up_0|NZ_CP018630.1_1313050_1314289_+	pfam00872, Transposase_mut, Transposase, Mutator family	NA|54aa|down_0|NZ_CP018630.1_1315405_1315567_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|76aa|down_1|NZ_CP018630.1_1315512_1315740_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|80aa|down_2|NZ_CP018630.1_1315941_1316181_+	pfam08737, Rgp1, Rgp1	NA|179aa|down_3|NZ_CP018630.1_1316483_1317020_+	pfam16107, DUF4825, Domain of unknown function (DUF4825)	NA|216aa|down_4|NZ_CP018630.1_1317193_1317841_+	NA	NA|584aa|down_5|NZ_CP018630.1_1317905_1319657_+	pfam13320, DUF4091, Domain of unknown function (DUF4091)	NA|292aa|down_6|NZ_CP018630.1_1319869_1320745_+	COG4640, COG4640, Predicted membrane protein [Function unknown]	NA|377aa|down_7|NZ_CP018630.1_1320802_1321933_-	COG5316, COG5316, Uncharacterized conserved protein [Function unknown]	NA|263aa|down_8|NZ_CP018630.1_1322088_1322877_+	cd09083, EEP-1, Exonuclease-Endonuclease-Phosphatase domain; uncharacterized family 1	NA|113aa|down_9|NZ_CP018630.1_1322931_1323270_+	NA
GCF_002327205.1_ASM232720v1	NZ_CP018630	Clostridium chauvoei strain 12S0467 chromosome, complete genome	4	2613525-2613619	4	CRISPRCasFinder	no		csx1,cas3,DinG,csa3,DEDDh,WYL,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2,cas3HD	Orphan	TTATCAAATATTCCTTCTGGTAA	23	0	0	NA	NA	NA	1	1	Orphan	csx1,cas3,DinG,csa3,DEDDh,WYL,cas6,cas8b1,cas7b,cas5,cas4,cas1,cas2,cas3HD	NA|114aa|up_5|NZ_CP018630.1_2606251_2606593_+,NA|339aa|down_3|NZ_CP018630.1_2620718_2621735_-	NA|239aa|up_9|NZ_CP018630.1_2601739_2602456_+	TIGR03725, T6A_YeaZ, tRNA threonylcarbamoyl adenosine modification protein YeaZ	NA|150aa|up_8|NZ_CP018630.1_2602439_2602889_+	TIGR01575, rimI, ribosomal-protein-alanine acetyltransferase	NA|199aa|up_7|NZ_CP018630.1_2602948_2603545_-	COG3601, COG3601, Predicted membrane protein [Function unknown]	NA|724aa|up_6|NZ_CP018630.1_2603885_2606057_-	COG2183, Tex, Transcriptional accessory protein [Transcription]	NA|114aa|up_5|NZ_CP018630.1_2606251_2606593_+	NA	NA|448aa|up_4|NZ_CP018630.1_2606678_2608022_+	pfam04389, Peptidase_M28, Peptidase family M28	NA|259aa|up_3|NZ_CP018630.1_2608125_2608902_-	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|330aa|up_2|NZ_CP018630.1_2608935_2609925_-	pfam01032, FecCD, FecCD transport family	NA|292aa|up_1|NZ_CP018630.1_2609943_2610819_-	TIGR03659, heme_ABC_transporter_heme-binding_protein_isdE, heme ABC transporter, heme-binding protein isdE	NA|210aa|up_0|NZ_CP018630.1_2610932_2611562_-	pfam05031, NEAT, Iron Transport-associated domain	NA|366aa|down_0|NZ_CP018630.1_2615298_2616397_-	PRK05589, PRK05589, peptide chain release factor 2; Provisional	NA|840aa|down_1|NZ_CP018630.1_2616455_2618975_-	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed	NA|175aa|down_2|NZ_CP018630.1_2619113_2619638_-	cd00552, RaiA, RaiA ("ribosome-associated inhibitor A", also known as Protein Y (PY), YfiA, and SpotY,  is a stress-response protein that binds the ribosomal subunit interface and arrests translation by interfering with aminoacyl-tRNA binding to the ribosomal A site	NA|339aa|down_3|NZ_CP018630.1_2620718_2621735_-	NA	NA|744aa|down_4|NZ_CP018630.1_2621746_2623978_-	TIGR01448, recD_rel, helicase, putative, RecD/TraA family	NA|379aa|down_5|NZ_CP018630.1_2624110_2625247_+	cd00854, NagA, N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate	NA|392aa|down_6|NZ_CP018630.1_2625315_2626491_-	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|177aa|down_7|NZ_CP018630.1_2627723_2628254_+	pfam06866, DUF1256, Protein of unknown function (DUF1256)	NA|345aa|down_8|NZ_CP018630.1_2628311_2629346_-	PRK13928, PRK13928, rod shape-determining protein Mbl; Provisional	NA|84aa|down_9|NZ_CP018630.1_2629473_2629725_-	pfam12116, SpoIIID, Stage III sporulation protein D
