assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002355475.1_ASM235547v1	NZ_AP014862	Pseudomonas furukawaii strain KF707	1	940976-941069	1	CRISPRCasFinder	no		RT,csa3,DEDDh,DinG,cas3	Orphan	AGGAGCCGGCTTGCCGGCGAATG	23	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,DEDDh,DinG,cas3	NA,NA	NA|91aa|up_9|NZ_AP014862.1_929834_930107_+	pfam04365, BrnT_toxin, Ribonuclease toxin, BrnT, of type II toxin-antitoxin system	NA|80aa|up_8|NZ_AP014862.1_930087_930327_+	pfam12441, CopG_antitoxin, CopG antitoxin of type II toxin-antitoxin system	NA|315aa|up_7|NZ_AP014862.1_930430_931375_+	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed	NA|144aa|up_6|NZ_AP014862.1_931431_931863_-	COG4968, PilE, Tfp pilus assembly protein PilE [Cell motility and secretion / Intracellular trafficking and secretion]	NA|1602aa|up_5|NZ_AP014862.1_931871_936677_-	COG3419, PilY1, Tfp pilus assembly protein, tip-associated adhesin PilY1 [Cell motility and secretion / Intracellular trafficking and secretion]	NA|161aa|up_4|NZ_AP014862.1_936699_937182_-	COG4726, PilX, Tfp pilus assembly protein PilX [Cell motility and secretion / Intracellular trafficking and secretion]	NA|316aa|up_3|NZ_AP014862.1_937178_938126_-	COG4966, PilW, Tfp pilus assembly protein PilW [Cell motility and secretion / Intracellular trafficking and secretion]	NA|196aa|up_2|NZ_AP014862.1_938122_938710_-	TIGR02523, probable_type-4_fimbrial_biogenesis_protein, type IV pilus modification protein PilV	NA|165aa|up_1|NZ_AP014862.1_938700_939195_-	COG4970, FimT, Tfp pilus assembly protein FimT [Cell motility and secretion / Intracellular trafficking and secretion]	NA|178aa|up_0|NZ_AP014862.1_939275_939809_-	COG4970, FimT, Tfp pilus assembly protein FimT [Cell motility and secretion / Intracellular trafficking and secretion]	NA|446aa|down_0|NZ_AP014862.1_941110_942448_-	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|534aa|down_1|NZ_AP014862.1_942450_944052_-	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS	NA|81aa|down_2|NZ_AP014862.1_944041_944284_-	PRK09459, pspG, envelope stress response protein PspG	NA|544aa|down_3|NZ_AP014862.1_944433_946065_+	PRK13981, PRK13981, NAD synthetase; Provisional	NA|340aa|down_4|NZ_AP014862.1_946169_947189_-	TIGR03302, OM_YfiO, outer membrane assembly lipoprotein YfiO	NA|324aa|down_5|NZ_AP014862.1_947336_948308_+	PRK11180, rluD, 23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA|242aa|down_6|NZ_AP014862.1_948304_949030_+	PRK10723, PRK10723, polyphenol oxidase	NA|855aa|down_7|NZ_AP014862.1_949259_951824_+	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB	NA|114aa|down_8|NZ_AP014862.1_952057_952399_-	pfam07238, PilZ, PilZ domain	NA|771aa|down_9|NZ_AP014862.1_952419_954732_-	pfam07793, DUF1631, Protein of unknown function (DUF1631)
GCF_002355475.1_ASM235547v1	NZ_AP014862	Pseudomonas furukawaii strain KF707	2	1930247-1930353	2	CRISPRCasFinder	no		RT,csa3,DEDDh,DinG,cas3	Orphan	ATTCGCCGGCAAGCCGGCTCCTACG	25	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,DEDDh,DinG,cas3	NA,NA	NA|217aa|up_9|NZ_AP014862.1_1917212_1917863_+	TIGR03384, betaine_BetI, transcriptional repressor BetI	NA|240aa|up_8|NZ_AP014862.1_1917951_1918671_+	PRK10766, PRK10766, two-component system response regulator TorR	NA|250aa|up_7|NZ_AP014862.1_1918694_1919444_+	cd13704, PBP2_HisK, The periplasmic sensor domain of histidine kinase receptors; the type 2 periplasmic binding fold protein	NA|757aa|up_6|NZ_AP014862.1_1919443_1921714_+	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS	NA|499aa|up_5|NZ_AP014862.1_1921840_1923337_+	TIGR00931, Uncharacterized_Na+/H+_antiporter_HI_1107, Na+/H+ antiporter NhaC	NA|264aa|up_4|NZ_AP014862.1_1923630_1924422_+	PRK06688, PRK06688, enoyl-CoA hydratase; Provisional	NA|387aa|up_3|NZ_AP014862.1_1924447_1925608_+	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases	NA|697aa|up_2|NZ_AP014862.1_1925621_1927712_+	COG1042, COG1042, Acyl-CoA synthetase (NDP forming) [Energy production and conversion]	NA|537aa|up_1|NZ_AP014862.1_1927824_1929435_+	PRK07524, PRK07524, 5-guanidino-2-oxopentanoate decarboxylase	NA|237aa|up_0|NZ_AP014862.1_1929506_1930217_+	COG2249, MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) [General function prediction only]	NA|390aa|down_0|NZ_AP014862.1_1930544_1931714_+	cd01159, NcnH, Naphthocyclinone hydroxylase	NA|313aa|down_1|NZ_AP014862.1_1931800_1932739_+	smart00903, Flavin_Reduct, Flavin reductase like domain	NA|567aa|down_2|NZ_AP014862.1_1932800_1934501_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|297aa|down_3|NZ_AP014862.1_1934686_1935577_-	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|488aa|down_4|NZ_AP014862.1_1935725_1937189_+	cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like	NA|538aa|down_5|NZ_AP014862.1_1937252_1938866_-	cd02808, GltS_FMN, Glutamate synthase (GltS) FMN-binding domain	NA|234aa|down_6|NZ_AP014862.1_1939083_1939785_-	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]	NA|256aa|down_7|NZ_AP014862.1_1939788_1940556_-	PRK11300, livG, leucine/isoleucine/valine transporter ATP-binding subunit; Provisional	NA|419aa|down_8|NZ_AP014862.1_1940552_1941809_-	PRK11301, livM, leucine/isoleucine/valine transporter permease subunit; Provisional	NA|308aa|down_9|NZ_AP014862.1_1941805_1942729_-	PRK10740, PRK10740, high-affinity branched-chain amino acid ABC transporter permease LivH
GCF_002355475.1_ASM235547v1	NZ_AP014862	Pseudomonas furukawaii strain KF707	3	2765119-2765217	3	CRISPRCasFinder	no		RT,csa3,DEDDh,DinG,cas3	Orphan	CATTCGCCGGCAAGCCGGCTCCTAC	25	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,DEDDh,DinG,cas3	NA,NA|237aa|down_8|NZ_AP014862.1_2780414_2781125_-,NA|398aa|down_9|NZ_AP014862.1_2781157_2782351_-	NA|337aa|up_9|NZ_AP014862.1_2749537_2750548_-	TIGR03718, R_switched_Alx, integral membrane protein, TerC family	NA|725aa|up_8|NZ_AP014862.1_2750937_2753112_+	COG4773, FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism]	NA|456aa|up_7|NZ_AP014862.1_2753235_2754603_-	cd13653, PBP2_phosphate_like_1, Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily	NA|110aa|up_6|NZ_AP014862.1_2754880_2755210_+	COG3422, COG3422, Uncharacterized conserved protein [Function unknown]	NA|271aa|up_5|NZ_AP014862.1_2755834_2756647_-	PRK11756, PRK11756, exonuclease III; Provisional	NA|218aa|up_4|NZ_AP014862.1_2756800_2757454_+	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|577aa|up_3|NZ_AP014862.1_2757490_2759221_+	COG0729, COG0729, Outer membrane protein [Cell envelope biogenesis, outer membrane]	NA|1211aa|up_2|NZ_AP014862.1_2759229_2762862_+	COG2911, COG2911, Uncharacterized protein conserved in bacteria [Function unknown]	NA|455aa|up_1|NZ_AP014862.1_2763096_2764461_+	COG1115, AlsT, Na+/alanine symporter [Amino acid transport and metabolism]	NA|166aa|up_0|NZ_AP014862.1_2764542_2765040_+	PRK00522, tpx, thiol peroxidase	NA|478aa|down_0|NZ_AP014862.1_2766541_2767975_-	COG0312, TldD, Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only]	NA|428aa|down_1|NZ_AP014862.1_2768143_2769427_+	PRK11556, PRK11556, MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA|1031aa|down_2|NZ_AP014862.1_2769423_2772516_+	PRK10503, PRK10503, MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA|1036aa|down_3|NZ_AP014862.1_2772631_2775739_+	PRK10614, PRK10614, multidrug efflux system subunit MdtC; Provisional	NA|500aa|down_4|NZ_AP014862.1_2775735_2777235_+	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family	NA|509aa|down_5|NZ_AP014862.1_2777359_2778886_-	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|118aa|down_6|NZ_AP014862.1_2778905_2779259_-	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|241aa|down_7|NZ_AP014862.1_2779692_2780415_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|237aa|down_8|NZ_AP014862.1_2780414_2781125_-	NA	NA|398aa|down_9|NZ_AP014862.1_2781157_2782351_-	NA
GCF_002355475.1_ASM235547v1	NZ_AP014862	Pseudomonas furukawaii strain KF707	4	3385315-3385432	4	CRISPRCasFinder	no		RT,csa3,DEDDh,DinG,cas3	Orphan	GTGCAAACCTTCGCGGGCAAGCCCGCTCCTACC	33	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,DEDDh,DinG,cas3	NA|131aa|up_4|NZ_AP014862.1_3380563_3380956_-,NA|96aa|up_3|NZ_AP014862.1_3381943_3382231_+,NA|101aa|down_4|NZ_AP014862.1_3399923_3400226_-,NA|327aa|down_6|NZ_AP014862.1_3400781_3401762_-	NA|422aa|up_9|NZ_AP014862.1_3375105_3376371_+	pfam03573, OprD, outer membrane porin, OprD family	NA|325aa|up_8|NZ_AP014862.1_3376428_3377403_-	PRK11537, PRK11537, putative GTP-binding protein YjiA; Provisional	NA|68aa|up_7|NZ_AP014862.1_3377611_3377815_-	COG2879, COG2879, Uncharacterized small protein [Function unknown]	NA|686aa|up_6|NZ_AP014862.1_3377828_3379886_-	PRK15015, PRK15015, carbon starvation protein CstA	NA|94aa|up_5|NZ_AP014862.1_3380186_3380468_+	PRK15441, PRK15441, peptidyl-prolyl cis-trans isomerase C; Provisional	NA|131aa|up_4|NZ_AP014862.1_3380563_3380956_-	NA	NA|96aa|up_3|NZ_AP014862.1_3381943_3382231_+	NA	NA|190aa|up_2|NZ_AP014862.1_3382227_3382797_+	pfam18226, QslA_E, LasR-specific antiactivator QslA chain E	NA|300aa|up_1|NZ_AP014862.1_3382823_3383723_-	pfam11453, DUF2950, Protein of unknown function (DUF2950)	NA|461aa|up_0|NZ_AP014862.1_3383735_3385118_-	pfam11737, DUF3300, Protein of unknown function (DUF3300)	NA|499aa|down_0|NZ_AP014862.1_3385445_3386942_-	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|3811aa|down_1|NZ_AP014862.1_3386993_3398426_-	pfam14252, DUF4347, Domain of unknown function (DUF4347)	NA|196aa|down_2|NZ_AP014862.1_3398725_3399313_+	COG4675, MdpB, Microcystin-dependent protein [Function unknown]	NA|191aa|down_3|NZ_AP014862.1_3399331_3399904_+	COG4675, MdpB, Microcystin-dependent protein [Function unknown]	NA|101aa|down_4|NZ_AP014862.1_3399923_3400226_-	NA	NA|167aa|down_5|NZ_AP014862.1_3400293_3400794_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|327aa|down_6|NZ_AP014862.1_3400781_3401762_-	NA	NA|267aa|down_7|NZ_AP014862.1_3401749_3402550_-	pfam05118, Asp_Arg_Hydrox, Aspartyl/Asparaginyl beta-hydroxylase	NA|698aa|down_8|NZ_AP014862.1_3402578_3404672_-	COG0845, AcrA, Membrane-fusion protein [Cell envelope biogenesis, outer membrane]	NA|440aa|down_9|NZ_AP014862.1_3404671_3405991_-	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit
GCF_002355475.1_ASM235547v1	NZ_AP014862	Pseudomonas furukawaii strain KF707	5	3471576-3471675	5	CRISPRCasFinder	no		RT,csa3,DEDDh,DinG,cas3	Orphan	CGTAGGAGCCGGCTTGCCGGCGAATG	26	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,DEDDh,DinG,cas3	NA,NA	NA|319aa|up_9|NZ_AP014862.1_3458301_3459258_-	TIGR03828, pfkB, 1-phosphofructokinase	NA|954aa|up_8|NZ_AP014862.1_3459257_3462119_-	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]	NA|328aa|up_7|NZ_AP014862.1_3462323_3463307_+	PRK11303, PRK11303, catabolite repressor/activator	NA|317aa|up_6|NZ_AP014862.1_3463395_3464346_-	PRK09685, PRK09685, DNA-binding transcriptional activator FeaR; Provisional	NA|468aa|up_5|NZ_AP014862.1_3464509_3465913_-	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|496aa|up_4|NZ_AP014862.1_3465951_3467439_-	cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins	NA|446aa|up_3|NZ_AP014862.1_3467678_3469016_+	PRK07481, PRK07481, hypothetical protein; Provisional	NA|220aa|up_2|NZ_AP014862.1_3469194_3469854_+	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|273aa|up_1|NZ_AP014862.1_3469963_3470782_+	pfam17409, MoaF_C, MoaF C-terminal domain	NA|261aa|up_0|NZ_AP014862.1_3470778_3471561_+	pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase	NA|416aa|down_0|NZ_AP014862.1_3471824_3473072_+	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|323aa|down_1|NZ_AP014862.1_3473202_3474171_+	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|387aa|down_2|NZ_AP014862.1_3474208_3475369_+	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|374aa|down_3|NZ_AP014862.1_3475384_3476506_+	cd09996, HDAC_classII_1, Histone deacetylases and histone-like deacetylases, classII	NA|400aa|down_4|NZ_AP014862.1_3476610_3477810_-	PRK11102, PRK11102, Bcr/CflA family multidrug efflux MFS transporter	NA|441aa|down_5|NZ_AP014862.1_3477870_3479193_-	COG1593, DctQ, TRAP-type C4-dicarboxylate transport system, large permease component [Carbohydrate transport and metabolism]	NA|177aa|down_6|NZ_AP014862.1_3479189_3479720_-	pfam04290, DctQ, Tripartite ATP-independent periplasmic transporters, DctQ component	NA|341aa|down_7|NZ_AP014862.1_3479726_3480749_-	cd13665, PBP2_TRAP_Dctp3_4, Periplasmic substrate-binding component of TRAP-type C4-dicarboxylate transport system DctP3 and DctP4; the type 2 periplasmic-binding protein fold	NA|306aa|down_8|NZ_AP014862.1_3481183_3482101_-	TIGR02297, AraC-type_DNA-binding_domain-containing_protein, 4-hydroxyphenylacetate catabolism regulatory protein HpaA	NA|220aa|down_9|NZ_AP014862.1_3482267_3482927_+	TIGR02305, HpaG-N-term, 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit
GCF_002355475.1_ASM235547v1	NZ_AP014862	Pseudomonas furukawaii strain KF707	6	4368914-4369009	6	CRISPRCasFinder	no		RT,csa3,DEDDh,DinG,cas3	Orphan	ATTCGCCGGCAAGCCGGCTCCTA	23	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,DEDDh,DinG,cas3	NA,NA	NA|90aa|up_9|NZ_AP014862.1_4361341_4361611_-	PRK05700, fliQ, flagellar type III secretion system protein FliQ	NA|250aa|up_8|NZ_AP014862.1_4361613_4362363_-	PRK05699, fliP, flagellar biosynthesis protein FliP; Reviewed	NA|145aa|up_7|NZ_AP014862.1_4362362_4362797_-	COG3190, FliO, Flagellar biogenesis protein [Cell motility and secretion]	NA|155aa|up_6|NZ_AP014862.1_4362800_4363265_-	PRK05698, fliN, flagellar motor switch protein FliN	NA|324aa|up_5|NZ_AP014862.1_4363307_4364279_-	PRK06666, fliM, flagellar motor switch protein FliM; Validated	NA|173aa|up_4|NZ_AP014862.1_4364292_4364811_-	PRK05696, fliL, flagellar basal body-associated protein FliL; Reviewed	NA|426aa|up_3|NZ_AP014862.1_4364996_4366274_-	COG3144, FliK, Flagellar hook-length control protein [Cell motility and secretion]	NA|118aa|up_2|NZ_AP014862.1_4366343_4366697_-	pfam01627, Hpt, Hpt domain	NA|565aa|up_1|NZ_AP014862.1_4366729_4368424_-	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE)	NA|102aa|up_0|NZ_AP014862.1_4368435_4368741_-	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation	NA|451aa|down_0|NZ_AP014862.1_4369459_4370812_-	PRK05688, fliI, flagellar protein export ATPase FliI	NA|264aa|down_1|NZ_AP014862.1_4370801_4371593_-	PRK05687, fliH, flagellar assembly protein FliH	NA|339aa|down_2|NZ_AP014862.1_4371600_4372617_-	PRK05686, fliG, flagellar motor switch protein G; Validated	NA|594aa|down_3|NZ_AP014862.1_4372609_4374391_-	PRK06007, fliF, flagellar basal body M-ring protein FliF	NA|111aa|down_4|NZ_AP014862.1_4374405_4374738_-	PRK00253, fliE, flagellar hook-basal body protein FliE; Reviewed	NA|471aa|down_5|NZ_AP014862.1_4374869_4376282_-	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|402aa|down_6|NZ_AP014862.1_4376288_4377494_-	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS	NA|491aa|down_7|NZ_AP014862.1_4377604_4379077_-	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|99aa|down_8|NZ_AP014862.1_4379295_4379592_-	pfam15268, Dapper, Dapper	NA|127aa|down_9|NZ_AP014862.1_4379621_4380002_-	PRK05685, fliS, flagellar export chaperone FliS
GCF_002355475.1_ASM235547v1	NZ_AP014862	Pseudomonas furukawaii strain KF707	7	4413746-4413833	7	CRISPRCasFinder	no		RT,csa3,DEDDh,DinG,cas3	Orphan	GTAGGAGCCGGCTTGCCGGCGAA	23	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,DEDDh,DinG,cas3	NA|68aa|up_0|NZ_AP014862.1_4413321_4413525_+,NA	NA|388aa|up_9|NZ_AP014862.1_4405387_4406551_-	PRK05684, flgJ, flagellar assembly peptidoglycan hydrolase FlgJ	NA|367aa|up_8|NZ_AP014862.1_4406560_4407661_-	PRK05303, flgI, flagellar basal body P-ring protein FlgI	NA|238aa|up_7|NZ_AP014862.1_4407672_4408386_-	PRK12698, flgH, flagellar basal body L-ring protein FlgH	NA|262aa|up_6|NZ_AP014862.1_4408404_4409190_-	PRK12693, flgG, flagellar basal body rod protein FlgG; Provisional	NA|248aa|up_5|NZ_AP014862.1_4409235_4409979_-	PRK12640, flgF, flagellar basal body rod protein FlgF; Reviewed	NA|446aa|up_4|NZ_AP014862.1_4410371_4411709_-	PRK05682, flgE, flagellar hook protein FlgE; Validated	NA|228aa|up_3|NZ_AP014862.1_4411754_4412438_-	PRK06655, flgD, flagellar hook assembly protein FlgD	NA|149aa|up_2|NZ_AP014862.1_4412454_4412901_-	PRK05681, flgC, flagellar basal body rod protein FlgC; Reviewed	NA|136aa|up_1|NZ_AP014862.1_4412915_4413323_-	PRK05680, flgB, flagellar basal body rod protein FlgB; Reviewed	NA|68aa|up_0|NZ_AP014862.1_4413321_4413525_+	NA	NA|141aa|down_0|NZ_AP014862.1_4413857_4414280_-	TIGR02337, Homoprotocatechuate_degradative_operon_repressor	NA|88aa|down_1|NZ_AP014862.1_4414465_4414729_-	pfam10976, DUF2790, Protein of unknown function (DUF2790)	NA|304aa|down_2|NZ_AP014862.1_4414905_4415817_-	PRK10559, PRK10559, p-hydroxybenzoic acid efflux pump subunit AaeA	NA|67aa|down_3|NZ_AP014862.1_4415824_4416025_-	pfam07869, DUF1656, Protein of unknown function (DUF1656)	NA|721aa|down_4|NZ_AP014862.1_4416014_4418177_-	pfam04632, FUSC, Fusaric acid resistance protein family	NA|503aa|down_5|NZ_AP014862.1_4418186_4419695_-	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family	NA|344aa|down_6|NZ_AP014862.1_4419864_4420896_+	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|123aa|down_7|NZ_AP014862.1_4421121_4421490_-	cd03529, Rieske_NirD, Assimilatory nitrite reductase (NirD) family, Rieske domain; Assimilatory nitrate and nitrite reductases convert nitrate through nitrite to ammonium	NA|851aa|down_8|NZ_AP014862.1_4421489_4424042_-	PRK14989, PRK14989, nitrite reductase subunit NirD; Provisional	NA|95aa|down_9|NZ_AP014862.1_4424575_4424860_+	pfam09907, HigB_toxin, HigB_toxin, RelE-like toxic component of a toxin-antitoxin system
GCF_002355475.1_ASM235547v1	NZ_AP014862	Pseudomonas furukawaii strain KF707	8	4430850-4431057	1	PILER-CR	no		RT,csa3,DEDDh,DinG,cas3	Orphan	GGCTCGCCCGCGAACATCTCCGCACCCTTCGCCGGCAAGCCGGCTCCTACGAAATCCA	58	2	5	4430908-4430924|4430908-4430924|4430908-4430924|4430983-4430999|4430983-4430999	NZ_AP014862.1_4750095-4750111|NZ_AP014862.1_4750170-4750186|NZ_AP014862.1_4990674-4990690|NZ_AP014862.1_4750095-4750111|NZ_AP014862.1_4750170-4750186	NA	2	2	Orphan	RT,csa3,DEDDh,DinG,cas3	NA,NA	NA|503aa|up_9|NZ_AP014862.1_4418186_4419695_-	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family	NA|344aa|up_8|NZ_AP014862.1_4419864_4420896_+	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|123aa|up_7|NZ_AP014862.1_4421121_4421490_-	cd03529, Rieske_NirD, Assimilatory nitrite reductase (NirD) family, Rieske domain; Assimilatory nitrate and nitrite reductases convert nitrate through nitrite to ammonium	NA|851aa|up_6|NZ_AP014862.1_4421489_4424042_-	PRK14989, PRK14989, nitrite reductase subunit NirD; Provisional	NA|95aa|up_5|NZ_AP014862.1_4424575_4424860_+	pfam09907, HigB_toxin, HigB_toxin, RelE-like toxic component of a toxin-antitoxin system	NA|134aa|up_4|NZ_AP014862.1_4424868_4425270_+	COG5499, COG5499, Predicted transcription regulator containing HTH domain [Transcription]	NA|280aa|up_3|NZ_AP014862.1_4425273_4426113_-	cd07580, nitrilase_2, Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases)	NA|495aa|up_2|NZ_AP014862.1_4426217_4427702_-	COG1457, CodB, Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]	NA|301aa|up_1|NZ_AP014862.1_4427977_4428880_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|542aa|up_0|NZ_AP014862.1_4428901_4430527_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|207aa|down_0|NZ_AP014862.1_4431095_4431716_-	cd01012, YcaC_related, YcaC related amidohydrolases; E	NA|224aa|down_1|NZ_AP014862.1_4431958_4432630_+	pfam13699, DUF4157, Domain of unknown function (DUF4157)	NA|222aa|down_2|NZ_AP014862.1_4432783_4433449_-	COG1802, GntR, Transcriptional regulators [Transcription]	NA|245aa|down_3|NZ_AP014862.1_4433522_4434257_-	cd05233, SDR_c, classical (c) SDRs	NA|344aa|down_4|NZ_AP014862.1_4434527_4435559_+	cd13589, PBP2_polyamine_RpCGA009, The periplasmic-binding component of an uncharacterized ABC transport system from Rhodopseudomonas palustris CGA009 and related proteins; contains the type 2 periplasmic-binding fold	NA|356aa|down_5|NZ_AP014862.1_4435617_4436685_+	PRK06148, PRK06148, hypothetical protein; Provisional	NA|442aa|down_6|NZ_AP014862.1_4436681_4438007_+	PRK06148, PRK06148, hypothetical protein; Provisional	NA|115aa|down_7|NZ_AP014862.1_4438072_4438417_-	cd06150, YjgF_YER057c_UK114_like_2, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function	NA|473aa|down_8|NZ_AP014862.1_4438509_4439928_-	cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1	NA|348aa|down_9|NZ_AP014862.1_4439943_4440987_-	PRK06270, PRK06270, homoserine dehydrogenase; Provisional
GCF_002355475.1_ASM235547v1	NZ_AP014862	Pseudomonas furukawaii strain KF707	9	4672872-4672971	8	CRISPRCasFinder	no		RT,csa3,DEDDh,DinG,cas3	Orphan	GTAGGAGCCGGCTTGCCGGCGAACGGCG	28	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,DEDDh,DinG,cas3	NA|368aa|up_0|NZ_AP014862.1_4671608_4672712_-,NA	NA|204aa|up_9|NZ_AP014862.1_4662711_4663323_+	PRK13487, PRK13487, chemoreceptor glutamine deamidase CheD; Provisional	NA|350aa|up_8|NZ_AP014862.1_4663327_4664377_+	PRK00742, PRK00742, chemotaxis-specific protein-glutamate methyltransferase CheB	NA|78aa|up_7|NZ_AP014862.1_4664444_4664678_+	COG4456, VagC, Virulence-associated protein and related proteins [Function unknown]	NA|136aa|up_6|NZ_AP014862.1_4664678_4665086_+	cd18735, PIN_HiVapC1-like, VapC-like PIN domain of Haemophilus influenzae VapC1 and related proteins	NA|129aa|up_5|NZ_AP014862.1_4665090_4665477_-	COG4729, COG4729, Uncharacterized conserved protein [Function unknown]	NA|676aa|up_4|NZ_AP014862.1_4665473_4667501_-	TIGR02123, conserved_inner_membrane_protein, TRAP transporter, 4TM/12TM fusion protein	NA|319aa|up_3|NZ_AP014862.1_4667580_4668537_-	TIGR02122, 31_kDa_immunogenic_protein_precursor	NA|346aa|up_2|NZ_AP014862.1_4668829_4669867_+	pfam04307, YdjM, LexA-binding, inner membrane-associated putative hydrolase	NA|536aa|up_1|NZ_AP014862.1_4669942_4671550_+	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|368aa|up_0|NZ_AP014862.1_4671608_4672712_-	NA	NA|487aa|down_0|NZ_AP014862.1_4673000_4674461_-	cd10336, SLC6sbd_Tyt1-Like, solute carrier 6 subfamily, Fusobacterium nucleatum Tyt1-like; solute-binding domain	NA|222aa|down_1|NZ_AP014862.1_4674546_4675212_-	TIGR01262, Maleylacetoacetate_isomerase, maleylacetoacetate isomerase	NA|365aa|down_2|NZ_AP014862.1_4675503_4676598_+	COG2771, CsgD, DNA-binding HTH domain-containing proteins [Transcription]	NA|294aa|down_3|NZ_AP014862.1_4676752_4677634_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|594aa|down_4|NZ_AP014862.1_4677675_4679457_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|201aa|down_5|NZ_AP014862.1_4679449_4680052_-	COG3531, COG3531, Predicted protein-disulfide isomerase [Posttranslational modification, protein turnover, chaperones]	NA|312aa|down_6|NZ_AP014862.1_4680090_4681026_-	COG1054, COG1054, Predicted sulfurtransferase [General function prediction only]	NA|102aa|down_7|NZ_AP014862.1_4681179_4681485_-	pfam01722, BolA, BolA-like protein	NA|170aa|down_8|NZ_AP014862.1_4681497_4682007_-	COG3184, COG3184, Uncharacterized protein conserved in bacteria [Function unknown]	NA|337aa|down_9|NZ_AP014862.1_4682284_4683295_+	pfam10974, DUF2804, Protein of unknown function (DUF2804)
GCF_002355475.1_ASM235547v1	NZ_AP014862	Pseudomonas furukawaii strain KF707	10	4812802-4812913	9	CRISPRCasFinder	no		RT,csa3,DEDDh,DinG,cas3	Orphan	GTAGCAGCCGGCTTGCCGGCGAATCGC	27	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,DEDDh,DinG,cas3	NA|221aa|up_8|NZ_AP014862.1_4803625_4804288_+,NA|147aa|down_2|NZ_AP014862.1_4816947_4817388_+,NA|223aa|down_5|NZ_AP014862.1_4819211_4819880_+,NA|187aa|down_6|NZ_AP014862.1_4819879_4820440_+,NA|72aa|down_9|NZ_AP014862.1_4822661_4822877_+	NA|92aa|up_9|NZ_AP014862.1_4803258_4803534_+	pfam13443, HTH_26, Cro/C1-type HTH DNA-binding domain	NA|221aa|up_8|NZ_AP014862.1_4803625_4804288_+	NA	NA|243aa|up_7|NZ_AP014862.1_4804292_4805021_+	pfam06160, EzrA, Septation ring formation regulator, EzrA	NA|92aa|up_6|NZ_AP014862.1_4805361_4805637_+	pfam07073, ROF, Modulator of Rho-dependent transcription termination (ROF)	NA|180aa|up_5|NZ_AP014862.1_4805695_4806235_-	pfam09831, DUF2058, Uncharacterized protein conserved in bacteria (DUF2058)	NA|277aa|up_4|NZ_AP014862.1_4806255_4807086_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|749aa|up_3|NZ_AP014862.1_4807178_4809425_-	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription]	NA|451aa|up_2|NZ_AP014862.1_4809509_4810862_-	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|304aa|up_1|NZ_AP014862.1_4810848_4811760_-	PRK11761, cysM, cysteine synthase CysM	NA|267aa|up_0|NZ_AP014862.1_4811963_4812764_+	sd00010, SLR, Sel1-like repeat	NA|919aa|down_0|NZ_AP014862.1_4813111_4815868_+	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional	NA|329aa|down_1|NZ_AP014862.1_4815929_4816916_+	cd12183, LDH_like_2, D-Lactate and related Dehydrogenases, NAD-binding and catalytic domains	NA|147aa|down_2|NZ_AP014862.1_4816947_4817388_+	NA	NA|136aa|down_3|NZ_AP014862.1_4817384_4817792_+	pfam03724, META, META domain	NA|352aa|down_4|NZ_AP014862.1_4817798_4818854_-	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|223aa|down_5|NZ_AP014862.1_4819211_4819880_+	NA	NA|187aa|down_6|NZ_AP014862.1_4819879_4820440_+	NA	NA|329aa|down_7|NZ_AP014862.1_4820536_4821523_+	cd07731, ComA-like_MBL-fold, Competence protein ComA, ComEC and related proteins; MBL-fold metallo hydrolase domain	NA|265aa|down_8|NZ_AP014862.1_4821579_4822374_-	COG0338, Dam, Site-specific DNA methylase [DNA replication, recombination, and repair]	NA|72aa|down_9|NZ_AP014862.1_4822661_4822877_+	NA
GCF_002355475.1_ASM235547v1	NZ_AP014862	Pseudomonas furukawaii strain KF707	11	5363212-5363324	10	CRISPRCasFinder	no		RT,csa3,DEDDh,DinG,cas3	Orphan	CCGTGGTTGATGGGTTTCGCTTCGCTC	27	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,DEDDh,DinG,cas3	NA,NA|228aa|down_2|NZ_AP014862.1_5367537_5368221_+,NA|81aa|down_8|NZ_AP014862.1_5376806_5377049_+,NA|57aa|down_9|NZ_AP014862.1_5377092_5377263_-	NA|596aa|up_9|NZ_AP014862.1_5349764_5351552_+	PRK02106, PRK02106, choline dehydrogenase; Validated	NA|488aa|up_8|NZ_AP014862.1_5351851_5353315_+	COG1457, CodB, Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]	NA|373aa|up_7|NZ_AP014862.1_5353311_5354430_+	cd09996, HDAC_classII_1, Histone deacetylases and histone-like deacetylases, classII	NA|317aa|up_6|NZ_AP014862.1_5354823_5355774_-	pfam03116, NQR2_RnfD_RnfE, NQR2, RnfD, RnfE family	NA|467aa|up_5|NZ_AP014862.1_5355770_5357171_-	PRK05035, PRK05035, electron transport complex protein RnfC; Provisional	NA|408aa|up_4|NZ_AP014862.1_5357502_5358726_-	cd06180, MFS_YjiJ, Uncharacterized protein YjiJ and similar proteins of the Major Facilitator Superfamily of transporters	NA|119aa|up_3|NZ_AP014862.1_5359195_5359552_+	pfam03692, CxxCxxCC, Putative zinc- or iron-chelating domain	NA|396aa|up_2|NZ_AP014862.1_5359744_5360932_-	PRK08243, PRK08243, 4-hydroxybenzoate 3-monooxygenase; Validated	NA|297aa|up_1|NZ_AP014862.1_5361126_5362017_+	cd06999, cupin_HpaA-like_N, AraC/XylS family transcriptional regulators similar to HpaA, N-terminal cupin domain	NA|290aa|up_0|NZ_AP014862.1_5362274_5363144_+	COG4313, COG4313, Protein involved in meta-pathway of phenol degradation [Energy production and conversion]	NA|492aa|down_0|NZ_AP014862.1_5365666_5367142_+	cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like	NA|112aa|down_1|NZ_AP014862.1_5367191_5367527_+	pfam13442, Cytochrome_CBB3, Cytochrome C oxidase, cbb3-type, subunit III	NA|228aa|down_2|NZ_AP014862.1_5367537_5368221_+	NA	NA|523aa|down_3|NZ_AP014862.1_5368232_5369801_+	pfam01565, FAD_binding_4, FAD binding domain	NA|400aa|down_4|NZ_AP014862.1_5370932_5372132_-	sd00010, SLR, Sel1-like repeat	NA|427aa|down_5|NZ_AP014862.1_5372211_5373492_-	COG0790, COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only]	NA|617aa|down_6|NZ_AP014862.1_5373491_5375342_-	cd09105, PLDc_vPLD1_2_like_2, Catalytic domain, repeat 2, of vertebrate phospholipases, PLD1 and PLD2, and similar proteins	NA|158aa|down_7|NZ_AP014862.1_5375999_5376473_+	smart01040, Bro-N, BRO family, N-terminal domain	NA|81aa|down_8|NZ_AP014862.1_5376806_5377049_+	NA	NA|57aa|down_9|NZ_AP014862.1_5377092_5377263_-	NA
