assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002355775.1_ASM235577v1	NZ_AP017624	Mycobacterium ulcerans subsp. shinshuense strain ATCC 33728	1	934463-934806	1	CRISPRCasFinder	no		DEDDh,cas3,csa3,casR,WYL,cas4,DinG	Orphan	CCGCCGGCTCCGCCGTTGCCGAACA	25	0	0	NA	NA	NA	6	6	Orphan	DEDDh,cas3,csa3,casR,WYL,cas4,DinG	NA|195aa|up_3|NZ_AP017624.1_930321_930906_-,NA|464aa|down_3|NZ_AP017624.1_939214_940606_+	NA|156aa|up_9|NZ_AP017624.1_919618_920086_+	COG0266, Nei, Formamidopyrimidine-DNA glycosylase [DNA replication, recombination, and repair]	NA|250aa|up_8|NZ_AP017624.1_920174_920924_+	PRK08251, PRK08251, SDR family oxidoreductase	NA|555aa|up_7|NZ_AP017624.1_921023_922688_-	PRK00179, pgi, glucose-6-phosphate isomerase; Reviewed	NA|324aa|up_6|NZ_AP017624.1_922730_923702_-	COG0627, COG0627, Predicted esterase [General function prediction only]	NA|105aa|up_5|NZ_AP017624.1_923764_924079_-	PRK07857, PRK07857, chorismate mutase	NA|770aa|up_4|NZ_AP017624.1_927933_930243_+	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA	NA|195aa|up_3|NZ_AP017624.1_930321_930906_-	NA	NA|356aa|up_2|NZ_AP017624.1_930909_931977_-	pfam01551, Peptidase_M23, Peptidase family M23	NA|388aa|up_1|NZ_AP017624.1_932251_933415_+	PRK00696, sucC, ADP-forming succinate--CoA ligase subunit beta	NA|301aa|up_0|NZ_AP017624.1_933429_934332_+	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated	NA|507aa|down_0|NZ_AP017624.1_935674_937195_+	PRK08257, PRK08257, acetyl-CoA acetyltransferase; Validated	NA|282aa|down_1|NZ_AP017624.1_937202_938048_-	TIGR03619, F420_Rv2161c, probable F420-dependent oxidoreductase, Rv2161c family	NA|299aa|down_2|NZ_AP017624.1_938269_939166_+	pfam17270, DUF5336, Family of unknown function (DUF5336)	NA|464aa|down_3|NZ_AP017624.1_939214_940606_+	NA	NA|216aa|down_4|NZ_AP017624.1_940658_941306_+	PRK05647, purN, phosphoribosylglycinamide formyltransferase; Reviewed	NA|524aa|down_5|NZ_AP017624.1_941302_942874_+	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional	NA|465aa|down_6|NZ_AP017624.1_942950_944345_+	COG1239, ChlI, Mg-chelatase subunit ChlI [Coenzyme metabolism]	NA|666aa|down_7|NZ_AP017624.1_944337_946335_+	COG4867, COG4867, Uncharacterized protein with a von Willebrand factor type A (vWA) domain [General function prediction only]	NA|201aa|down_8|NZ_AP017624.1_946362_946965_-	pfam08044, DUF1707, Domain of unknown function (DUF1707)	NA|258aa|down_9|NZ_AP017624.1_947427_948201_-	PRK07827, PRK07827, enoyl-CoA hydratase family protein
GCF_002355775.1_ASM235577v1	NZ_AP017624	Mycobacterium ulcerans subsp. shinshuense strain ATCC 33728	2	934877-935150	2	CRISPRCasFinder	no		DEDDh,cas3,csa3,casR,WYL,cas4,DinG	Orphan	CCGCCGGCTCCGCCGTTGCCGAACA	25	0	0	NA	NA	NA	4	4	Orphan	DEDDh,cas3,csa3,casR,WYL,cas4,DinG	NA|195aa|up_3|NZ_AP017624.1_930321_930906_-,NA|464aa|down_3|NZ_AP017624.1_939214_940606_+	NA|156aa|up_9|NZ_AP017624.1_919618_920086_+	COG0266, Nei, Formamidopyrimidine-DNA glycosylase [DNA replication, recombination, and repair]	NA|250aa|up_8|NZ_AP017624.1_920174_920924_+	PRK08251, PRK08251, SDR family oxidoreductase	NA|555aa|up_7|NZ_AP017624.1_921023_922688_-	PRK00179, pgi, glucose-6-phosphate isomerase; Reviewed	NA|324aa|up_6|NZ_AP017624.1_922730_923702_-	COG0627, COG0627, Predicted esterase [General function prediction only]	NA|105aa|up_5|NZ_AP017624.1_923764_924079_-	PRK07857, PRK07857, chorismate mutase	NA|770aa|up_4|NZ_AP017624.1_927933_930243_+	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA	NA|195aa|up_3|NZ_AP017624.1_930321_930906_-	NA	NA|356aa|up_2|NZ_AP017624.1_930909_931977_-	pfam01551, Peptidase_M23, Peptidase family M23	NA|388aa|up_1|NZ_AP017624.1_932251_933415_+	PRK00696, sucC, ADP-forming succinate--CoA ligase subunit beta	NA|301aa|up_0|NZ_AP017624.1_933429_934332_+	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated	NA|507aa|down_0|NZ_AP017624.1_935674_937195_+	PRK08257, PRK08257, acetyl-CoA acetyltransferase; Validated	NA|282aa|down_1|NZ_AP017624.1_937202_938048_-	TIGR03619, F420_Rv2161c, probable F420-dependent oxidoreductase, Rv2161c family	NA|299aa|down_2|NZ_AP017624.1_938269_939166_+	pfam17270, DUF5336, Family of unknown function (DUF5336)	NA|464aa|down_3|NZ_AP017624.1_939214_940606_+	NA	NA|216aa|down_4|NZ_AP017624.1_940658_941306_+	PRK05647, purN, phosphoribosylglycinamide formyltransferase; Reviewed	NA|524aa|down_5|NZ_AP017624.1_941302_942874_+	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional	NA|465aa|down_6|NZ_AP017624.1_942950_944345_+	COG1239, ChlI, Mg-chelatase subunit ChlI [Coenzyme metabolism]	NA|666aa|down_7|NZ_AP017624.1_944337_946335_+	COG4867, COG4867, Uncharacterized protein with a von Willebrand factor type A (vWA) domain [General function prediction only]	NA|201aa|down_8|NZ_AP017624.1_946362_946965_-	pfam08044, DUF1707, Domain of unknown function (DUF1707)	NA|258aa|down_9|NZ_AP017624.1_947427_948201_-	PRK07827, PRK07827, enoyl-CoA hydratase family protein
GCF_002355775.1_ASM235577v1	NZ_AP017624	Mycobacterium ulcerans subsp. shinshuense strain ATCC 33728	3	2193708-2193897	3	CRISPRCasFinder	no		DEDDh,cas3,csa3,casR,WYL,cas4,DinG	Orphan	TCCGCCGGTGCCGCCGGTGCCGCCGTT	27	0	0	NA	NA	NA	2	2	Orphan	DEDDh,cas3,csa3,casR,WYL,cas4,DinG	NA|201aa|up_6|NZ_AP017624.1_2186215_2186818_+,NA|65aa|down_7|NZ_AP017624.1_2203655_2203850_+	NA|303aa|up_9|NZ_AP017624.1_2180727_2181636_-	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]	NA|437aa|up_8|NZ_AP017624.1_2181797_2183108_-	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]	NA|901aa|up_7|NZ_AP017624.1_2183241_2185944_-	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed	NA|201aa|up_6|NZ_AP017624.1_2186215_2186818_+	NA	NA|156aa|up_5|NZ_AP017624.1_2186853_2187321_+	pfam11253, DUF3052, Protein of unknown function (DUF3052)	NA|154aa|up_4|NZ_AP017624.1_2187320_2187782_+	cd03018, PRX_AhpE_like, Peroxiredoxin (PRX) family, AhpE-like subfamily; composed of proteins similar to Mycobacterium tuberculosis AhpE	NA|517aa|up_3|NZ_AP017624.1_2187920_2189471_-	TIGR02946, Putative_diacyglycerol_O-acyltransferase_Mb3115, acyltransferase, WS/DGAT/MGAT	NA|491aa|up_2|NZ_AP017624.1_2189467_2190940_-	TIGR02946, Putative_diacyglycerol_O-acyltransferase_Mb3115, acyltransferase, WS/DGAT/MGAT	NA|361aa|up_1|NZ_AP017624.1_2190976_2192059_-	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family	NA|187aa|up_0|NZ_AP017624.1_2192058_2192619_-	cd20302, cupin_DAD, 2,4'-Dihydroxyacetophenone dioxygenase (DAD), cupin domain	NA|187aa|down_0|NZ_AP017624.1_2195806_2196367_-	cd20302, cupin_DAD, 2,4'-Dihydroxyacetophenone dioxygenase (DAD), cupin domain	NA|334aa|down_1|NZ_AP017624.1_2196735_2197737_+	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs	NA|354aa|down_2|NZ_AP017624.1_2197796_2198858_+	cd02000, TPP_E1_PDC_ADC_BCADC, Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC)	NA|338aa|down_3|NZ_AP017624.1_2198854_2199868_+	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]	NA|474aa|down_4|NZ_AP017624.1_2199878_2201300_+	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|345aa|down_5|NZ_AP017624.1_2201372_2202407_+	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term	NA|337aa|down_6|NZ_AP017624.1_2202510_2203521_+	COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]	NA|65aa|down_7|NZ_AP017624.1_2203655_2203850_+	NA	NA|375aa|down_8|NZ_AP017624.1_2203879_2205004_+	pfam06441, EHN, Epoxide hydrolase N-terminus	NA|310aa|down_9|NZ_AP017624.1_2205092_2206022_+	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]
GCF_002355775.1_ASM235577v1	NZ_AP017624	Mycobacterium ulcerans subsp. shinshuense strain ATCC 33728	4	2194032-2194392	4	CRISPRCasFinder	no		DEDDh,cas3,csa3,casR,WYL,cas4,DinG	Orphan	TCCGCCGGTGCCGCCGGTGCCGCCGTT	27	0	0	NA	NA	NA	5	5	Orphan	DEDDh,cas3,csa3,casR,WYL,cas4,DinG	NA|201aa|up_6|NZ_AP017624.1_2186215_2186818_+,NA|65aa|down_7|NZ_AP017624.1_2203655_2203850_+	NA|303aa|up_9|NZ_AP017624.1_2180727_2181636_-	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]	NA|437aa|up_8|NZ_AP017624.1_2181797_2183108_-	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]	NA|901aa|up_7|NZ_AP017624.1_2183241_2185944_-	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed	NA|201aa|up_6|NZ_AP017624.1_2186215_2186818_+	NA	NA|156aa|up_5|NZ_AP017624.1_2186853_2187321_+	pfam11253, DUF3052, Protein of unknown function (DUF3052)	NA|154aa|up_4|NZ_AP017624.1_2187320_2187782_+	cd03018, PRX_AhpE_like, Peroxiredoxin (PRX) family, AhpE-like subfamily; composed of proteins similar to Mycobacterium tuberculosis AhpE	NA|517aa|up_3|NZ_AP017624.1_2187920_2189471_-	TIGR02946, Putative_diacyglycerol_O-acyltransferase_Mb3115, acyltransferase, WS/DGAT/MGAT	NA|491aa|up_2|NZ_AP017624.1_2189467_2190940_-	TIGR02946, Putative_diacyglycerol_O-acyltransferase_Mb3115, acyltransferase, WS/DGAT/MGAT	NA|361aa|up_1|NZ_AP017624.1_2190976_2192059_-	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family	NA|187aa|up_0|NZ_AP017624.1_2192058_2192619_-	cd20302, cupin_DAD, 2,4'-Dihydroxyacetophenone dioxygenase (DAD), cupin domain	NA|187aa|down_0|NZ_AP017624.1_2195806_2196367_-	cd20302, cupin_DAD, 2,4'-Dihydroxyacetophenone dioxygenase (DAD), cupin domain	NA|334aa|down_1|NZ_AP017624.1_2196735_2197737_+	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs	NA|354aa|down_2|NZ_AP017624.1_2197796_2198858_+	cd02000, TPP_E1_PDC_ADC_BCADC, Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC)	NA|338aa|down_3|NZ_AP017624.1_2198854_2199868_+	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]	NA|474aa|down_4|NZ_AP017624.1_2199878_2201300_+	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|345aa|down_5|NZ_AP017624.1_2201372_2202407_+	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term	NA|337aa|down_6|NZ_AP017624.1_2202510_2203521_+	COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]	NA|65aa|down_7|NZ_AP017624.1_2203655_2203850_+	NA	NA|375aa|down_8|NZ_AP017624.1_2203879_2205004_+	pfam06441, EHN, Epoxide hydrolase N-terminus	NA|310aa|down_9|NZ_AP017624.1_2205092_2206022_+	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]
GCF_002355775.1_ASM235577v1	NZ_AP017624	Mycobacterium ulcerans subsp. shinshuense strain ATCC 33728	5	2194464-2194718	5	CRISPRCasFinder	no		DEDDh,cas3,csa3,casR,WYL,cas4,DinG	Orphan	TCCGCCGGTGCCGCCGGTGCCGCCGTT	27	0	0	NA	NA	NA	3	3	Orphan	DEDDh,cas3,csa3,casR,WYL,cas4,DinG	NA|201aa|up_6|NZ_AP017624.1_2186215_2186818_+,NA|65aa|down_7|NZ_AP017624.1_2203655_2203850_+	NA|303aa|up_9|NZ_AP017624.1_2180727_2181636_-	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]	NA|437aa|up_8|NZ_AP017624.1_2181797_2183108_-	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]	NA|901aa|up_7|NZ_AP017624.1_2183241_2185944_-	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed	NA|201aa|up_6|NZ_AP017624.1_2186215_2186818_+	NA	NA|156aa|up_5|NZ_AP017624.1_2186853_2187321_+	pfam11253, DUF3052, Protein of unknown function (DUF3052)	NA|154aa|up_4|NZ_AP017624.1_2187320_2187782_+	cd03018, PRX_AhpE_like, Peroxiredoxin (PRX) family, AhpE-like subfamily; composed of proteins similar to Mycobacterium tuberculosis AhpE	NA|517aa|up_3|NZ_AP017624.1_2187920_2189471_-	TIGR02946, Putative_diacyglycerol_O-acyltransferase_Mb3115, acyltransferase, WS/DGAT/MGAT	NA|491aa|up_2|NZ_AP017624.1_2189467_2190940_-	TIGR02946, Putative_diacyglycerol_O-acyltransferase_Mb3115, acyltransferase, WS/DGAT/MGAT	NA|361aa|up_1|NZ_AP017624.1_2190976_2192059_-	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family	NA|187aa|up_0|NZ_AP017624.1_2192058_2192619_-	cd20302, cupin_DAD, 2,4'-Dihydroxyacetophenone dioxygenase (DAD), cupin domain	NA|187aa|down_0|NZ_AP017624.1_2195806_2196367_-	cd20302, cupin_DAD, 2,4'-Dihydroxyacetophenone dioxygenase (DAD), cupin domain	NA|334aa|down_1|NZ_AP017624.1_2196735_2197737_+	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs	NA|354aa|down_2|NZ_AP017624.1_2197796_2198858_+	cd02000, TPP_E1_PDC_ADC_BCADC, Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC)	NA|338aa|down_3|NZ_AP017624.1_2198854_2199868_+	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]	NA|474aa|down_4|NZ_AP017624.1_2199878_2201300_+	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|345aa|down_5|NZ_AP017624.1_2201372_2202407_+	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term	NA|337aa|down_6|NZ_AP017624.1_2202510_2203521_+	COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]	NA|65aa|down_7|NZ_AP017624.1_2203655_2203850_+	NA	NA|375aa|down_8|NZ_AP017624.1_2203879_2205004_+	pfam06441, EHN, Epoxide hydrolase N-terminus	NA|310aa|down_9|NZ_AP017624.1_2205092_2206022_+	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]
GCF_002355775.1_ASM235577v1	NZ_AP017624	Mycobacterium ulcerans subsp. shinshuense strain ATCC 33728	6	2375537-2375630	6	CRISPRCasFinder	no		DEDDh,cas3,csa3,casR,WYL,cas4,DinG	Orphan	GCCGGCGGTGCGGGCGGCACTGGCGGCGTCG	31	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,casR,WYL,cas4,DinG	NA|291aa|up_5|NZ_AP017624.1_2367485_2368358_+,NA|88aa|up_2|NZ_AP017624.1_2371290_2371554_+,NA|179aa|up_0|NZ_AP017624.1_2373896_2374433_-,NA|90aa|down_1|NZ_AP017624.1_2377942_2378212_-,NA|215aa|down_3|NZ_AP017624.1_2378795_2379440_-,NA|452aa|down_5|NZ_AP017624.1_2383812_2385168_+	NA|501aa|up_9|NZ_AP017624.1_2359094_2360597_+	pfam02384, N6_Mtase, N-6 DNA Methylase	NA|244aa|up_8|NZ_AP017624.1_2361094_2361826_+	cd17250, RMtype1_S_Eco4255II_TRD2-CR2_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to Escherichia coli O118:H16 07-4255 S subunit (S	NA|245aa|up_7|NZ_AP017624.1_2364949_2365684_+	pfam01863, DUF45, Protein of unknown function DUF45	NA|576aa|up_6|NZ_AP017624.1_2365758_2367486_+	pfam07693, KAP_NTPase, KAP family P-loop domain	NA|291aa|up_5|NZ_AP017624.1_2367485_2368358_+	NA	NA|250aa|up_4|NZ_AP017624.1_2369616_2370366_+	pfam01026, TatD_DNase, TatD related DNase	NA|162aa|up_3|NZ_AP017624.1_2370565_2371051_-	pfam08281, Sigma70_r4_2, Sigma-70, region 4	NA|88aa|up_2|NZ_AP017624.1_2371290_2371554_+	NA	NA|511aa|up_1|NZ_AP017624.1_2371642_2373175_+	cd07302, CHD, cyclase homology domain	NA|179aa|up_0|NZ_AP017624.1_2373896_2374433_-	NA	NA|251aa|down_0|NZ_AP017624.1_2376930_2377683_-	PLN02392, PLN02392, probable steroid reductase DET2	NA|90aa|down_1|NZ_AP017624.1_2377942_2378212_-	NA	NA|112aa|down_2|NZ_AP017624.1_2378271_2378607_-	pfam16525, MHB, Haemophore, haem-binding	NA|215aa|down_3|NZ_AP017624.1_2378795_2379440_-	NA	NA|300aa|down_4|NZ_AP017624.1_2382913_2383813_+	cd00685, Trans_IPPS_HT, Trans-Isoprenyl Diphosphate Synthases, head-to-tail	NA|452aa|down_5|NZ_AP017624.1_2383812_2385168_+	NA	NA|291aa|down_6|NZ_AP017624.1_2385209_2386082_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|226aa|down_7|NZ_AP017624.1_2389437_2390115_-	PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional	NA|329aa|down_8|NZ_AP017624.1_2390367_2391354_+	cd01902, Ntn_CGH, Choloylglycine hydrolase (CGH) is a bile salt-modifying enzyme that hydrolyzes non-peptide carbon-nitrogen bonds in choloylglycine and choloyltaurine, both of which are present in bile	NA|519aa|down_9|NZ_AP017624.1_2391522_2393079_+	PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed
GCF_002355775.1_ASM235577v1	NZ_AP017624	Mycobacterium ulcerans subsp. shinshuense strain ATCC 33728	7	3630131-3631106	1	CRT	no		DEDDh,cas3,csa3,casR,WYL,cas4,DinG	Orphan	GGCGGCANCGGCGGCAACGGCGGNNNCGGCG	31	2	9	3630744-3630769|3630744-3630769|3630744-3630769|3630744-3630769|3630918-3630940|3630918-3630940|3630918-3630940|3630918-3630940|3630918-3630940	NZ_AP017624.1_1259931-1259906|NZ_AP017624.1_1341079-1341054|NZ_AP017624.1_1341118-1341093|NZ_AP017624.1_4081781-4081806|NZ_AP017624.1_242645-242623|NZ_AP017624.1_1272995-1273017|NZ_AP017624.1_3399090-3399112|NZ_AP017624.1_4081724-4081746|NZ_AP017624.1_4779138-4779160	NA	13	13	Orphan	DEDDh,cas3,csa3,casR,WYL,cas4,DinG	NA,NA|255aa|down_4|NZ_AP017624.1_3637300_3638065_-,NA|237aa|down_5|NZ_AP017624.1_3638061_3638772_-	NA|147aa|up_9|NZ_AP017624.1_3620399_3620840_+	pfam01641, SelR, SelR domain	NA|250aa|up_8|NZ_AP017624.1_3620847_3621597_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|232aa|up_7|NZ_AP017624.1_3621593_3622289_-	COG3253, ywfI, Predicted heme peroxidase involved in anaerobic stress response [General function prediction only]	NA|456aa|up_6|NZ_AP017624.1_3622294_3623662_-	PRK11883, PRK11883, protoporphyrinogen oxidase; Reviewed	NA|354aa|up_5|NZ_AP017624.1_3623658_3624720_-	PRK00115, hemE, uroporphyrinogen decarboxylase; Validated	NA|270aa|up_4|NZ_AP017624.1_3624842_3625652_+	PRK07327, PRK07327, enoyl-CoA hydratase/isomerase family protein	NA|194aa|up_3|NZ_AP017624.1_3625790_3626372_+	pfam11452, DUF3000, Protein of unknown function (DUF3000)	NA|436aa|up_2|NZ_AP017624.1_3626373_3627681_+	COG0349, Rnd, Ribonuclease D [Translation, ribosomal structure and biogenesis]	NA|125aa|up_1|NZ_AP017624.1_3627677_3628052_-	COG1154, Dxs, Deoxyxylulose-5-phosphate synthase [Coenzyme metabolism / Lipid metabolism]	NA|130aa|up_0|NZ_AP017624.1_3628116_3628506_-	PRK05444, PRK05444, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	NA|638aa|down_0|NZ_AP017624.1_3632064_3633978_-	COG1154, Dxs, Deoxyxylulose-5-phosphate synthase [Coenzyme metabolism / Lipid metabolism]	NA|165aa|down_1|NZ_AP017624.1_3634130_3634625_+	cd17788, CBS_pair_bac, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria	NA|430aa|down_2|NZ_AP017624.1_3634680_3635970_+	cd01116, P_permease, Permease P (pink-eyed dilution)	NA|429aa|down_3|NZ_AP017624.1_3636008_3637295_+	cd01116, P_permease, Permease P (pink-eyed dilution)	NA|255aa|down_4|NZ_AP017624.1_3637300_3638065_-	NA	NA|237aa|down_5|NZ_AP017624.1_3638061_3638772_-	NA	NA|402aa|down_6|NZ_AP017624.1_3639784_3640990_-	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]	NA|666aa|down_7|NZ_AP017624.1_3640986_3642984_-	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|228aa|down_8|NZ_AP017624.1_3643116_3643800_+	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]	NA|221aa|down_9|NZ_AP017624.1_3643852_3644515_+	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
GCF_002355775.1_ASM235577v1	NZ_AP017624	Mycobacterium ulcerans subsp. shinshuense strain ATCC 33728	8	4090536-4090607	7	CRISPRCasFinder	no		DEDDh,cas3,csa3,casR,WYL,cas4,DinG	Orphan	TCACCACCGGCCCCGCCAACACC	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,casR,WYL,cas4,DinG	NA,NA	NA|480aa|up_9|NZ_AP017624.1_4067449_4068889_-	COG3552, CoxE, Protein containing von Willebrand factor type A (vWA) domain [General function prediction only]	NA|292aa|up_8|NZ_AP017624.1_4068902_4069778_-	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|424aa|up_7|NZ_AP017624.1_4069811_4071083_-	PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional	NA|465aa|up_6|NZ_AP017624.1_4071175_4072570_-	pfam00924, MS_channel, Mechanosensitive ion channel	NA|731aa|up_5|NZ_AP017624.1_4072566_4074759_-	cd07302, CHD, cyclase homology domain	NA|467aa|up_4|NZ_AP017624.1_4074924_4076325_-	pfam00924, MS_channel, Mechanosensitive ion channel	NA|700aa|up_3|NZ_AP017624.1_4080609_4082709_+	pfam00934, PE, PE family	NA|681aa|up_2|NZ_AP017624.1_4082821_4084864_-	PRK02628, nadE, NAD synthetase; Reviewed	NA|290aa|up_1|NZ_AP017624.1_4085154_4086024_+	cd01409, SIRT4, SIRT4: Eukaryotic and prokaryotic group (class2) which includes human sirtuin SIRT4 and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation	NA|213aa|up_0|NZ_AP017624.1_4087499_4088138_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|369aa|down_0|NZ_AP017624.1_4093826_4094933_-	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional	NA|480aa|down_1|NZ_AP017624.1_4094932_4096372_-	PRK12296, obgE, GTPase CgtA; Reviewed	NA|89aa|down_2|NZ_AP017624.1_4096475_4096742_-	PRK05435, rpmA, 50S ribosomal protein L27; Validated	NA|104aa|down_3|NZ_AP017624.1_4096759_4097071_-	PRK05573, rplU, 50S ribosomal protein L21; Validated	NA|1016aa|down_4|NZ_AP017624.1_4097343_4100391_-	TIGR00757, Ribonuclease_E/G-like_protein, ribonuclease, Rne/Rng family	NA|137aa|down_5|NZ_AP017624.1_4100717_4101128_-	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|135aa|down_6|NZ_AP017624.1_4101191_4101596_-	pfam14017, DUF4233, Protein of unknown function (DUF4233)	NA|485aa|down_7|NZ_AP017624.1_4101592_4103047_-	COG0285, FolC, Folylpolyglutamate synthase [Coenzyme metabolism]	NA|887aa|down_8|NZ_AP017624.1_4103043_4105704_-	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|208aa|down_9|NZ_AP017624.1_4105778_4106402_-	smart00108, B_lectin, Bulb-type mannose-specific lectin
GCF_002355775.1_ASM235577v1	NZ_AP017624	Mycobacterium ulcerans subsp. shinshuense strain ATCC 33728	9	4091142-4091258	8	CRISPRCasFinder	no		DEDDh,cas3,csa3,casR,WYL,cas4,DinG	Orphan	TCACCACCGGCCCCGCCAACACC	23	1	3	4091165-4091186|4091165-4091186|4091165-4091186	NZ_AP017624.1_2750346-2750367|NZ_AP017624.1_1202512-1202491|NZ_AP017624.1_1329872-1329851	NA	2	2	Orphan	DEDDh,cas3,csa3,casR,WYL,cas4,DinG	NA,NA	NA|480aa|up_9|NZ_AP017624.1_4067449_4068889_-	COG3552, CoxE, Protein containing von Willebrand factor type A (vWA) domain [General function prediction only]	NA|292aa|up_8|NZ_AP017624.1_4068902_4069778_-	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|424aa|up_7|NZ_AP017624.1_4069811_4071083_-	PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional	NA|465aa|up_6|NZ_AP017624.1_4071175_4072570_-	pfam00924, MS_channel, Mechanosensitive ion channel	NA|731aa|up_5|NZ_AP017624.1_4072566_4074759_-	cd07302, CHD, cyclase homology domain	NA|467aa|up_4|NZ_AP017624.1_4074924_4076325_-	pfam00924, MS_channel, Mechanosensitive ion channel	NA|700aa|up_3|NZ_AP017624.1_4080609_4082709_+	pfam00934, PE, PE family	NA|681aa|up_2|NZ_AP017624.1_4082821_4084864_-	PRK02628, nadE, NAD synthetase; Reviewed	NA|290aa|up_1|NZ_AP017624.1_4085154_4086024_+	cd01409, SIRT4, SIRT4: Eukaryotic and prokaryotic group (class2) which includes human sirtuin SIRT4 and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation	NA|213aa|up_0|NZ_AP017624.1_4087499_4088138_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|369aa|down_0|NZ_AP017624.1_4093826_4094933_-	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional	NA|480aa|down_1|NZ_AP017624.1_4094932_4096372_-	PRK12296, obgE, GTPase CgtA; Reviewed	NA|89aa|down_2|NZ_AP017624.1_4096475_4096742_-	PRK05435, rpmA, 50S ribosomal protein L27; Validated	NA|104aa|down_3|NZ_AP017624.1_4096759_4097071_-	PRK05573, rplU, 50S ribosomal protein L21; Validated	NA|1016aa|down_4|NZ_AP017624.1_4097343_4100391_-	TIGR00757, Ribonuclease_E/G-like_protein, ribonuclease, Rne/Rng family	NA|137aa|down_5|NZ_AP017624.1_4100717_4101128_-	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|135aa|down_6|NZ_AP017624.1_4101191_4101596_-	pfam14017, DUF4233, Protein of unknown function (DUF4233)	NA|485aa|down_7|NZ_AP017624.1_4101592_4103047_-	COG0285, FolC, Folylpolyglutamate synthase [Coenzyme metabolism]	NA|887aa|down_8|NZ_AP017624.1_4103043_4105704_-	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|208aa|down_9|NZ_AP017624.1_4105778_4106402_-	smart00108, B_lectin, Bulb-type mannose-specific lectin
GCF_002355775.1_ASM235577v1	NZ_AP017624	Mycobacterium ulcerans subsp. shinshuense strain ATCC 33728	10	4091319-4091405	9	CRISPRCasFinder	no		DEDDh,cas3,csa3,casR,WYL,cas4,DinG	Orphan	TCACCACCGGCCCCGCCAACACC	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,casR,WYL,cas4,DinG	NA,NA	NA|480aa|up_9|NZ_AP017624.1_4067449_4068889_-	COG3552, CoxE, Protein containing von Willebrand factor type A (vWA) domain [General function prediction only]	NA|292aa|up_8|NZ_AP017624.1_4068902_4069778_-	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|424aa|up_7|NZ_AP017624.1_4069811_4071083_-	PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional	NA|465aa|up_6|NZ_AP017624.1_4071175_4072570_-	pfam00924, MS_channel, Mechanosensitive ion channel	NA|731aa|up_5|NZ_AP017624.1_4072566_4074759_-	cd07302, CHD, cyclase homology domain	NA|467aa|up_4|NZ_AP017624.1_4074924_4076325_-	pfam00924, MS_channel, Mechanosensitive ion channel	NA|700aa|up_3|NZ_AP017624.1_4080609_4082709_+	pfam00934, PE, PE family	NA|681aa|up_2|NZ_AP017624.1_4082821_4084864_-	PRK02628, nadE, NAD synthetase; Reviewed	NA|290aa|up_1|NZ_AP017624.1_4085154_4086024_+	cd01409, SIRT4, SIRT4: Eukaryotic and prokaryotic group (class2) which includes human sirtuin SIRT4 and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation	NA|213aa|up_0|NZ_AP017624.1_4087499_4088138_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|369aa|down_0|NZ_AP017624.1_4093826_4094933_-	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional	NA|480aa|down_1|NZ_AP017624.1_4094932_4096372_-	PRK12296, obgE, GTPase CgtA; Reviewed	NA|89aa|down_2|NZ_AP017624.1_4096475_4096742_-	PRK05435, rpmA, 50S ribosomal protein L27; Validated	NA|104aa|down_3|NZ_AP017624.1_4096759_4097071_-	PRK05573, rplU, 50S ribosomal protein L21; Validated	NA|1016aa|down_4|NZ_AP017624.1_4097343_4100391_-	TIGR00757, Ribonuclease_E/G-like_protein, ribonuclease, Rne/Rng family	NA|137aa|down_5|NZ_AP017624.1_4100717_4101128_-	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|135aa|down_6|NZ_AP017624.1_4101191_4101596_-	pfam14017, DUF4233, Protein of unknown function (DUF4233)	NA|485aa|down_7|NZ_AP017624.1_4101592_4103047_-	COG0285, FolC, Folylpolyglutamate synthase [Coenzyme metabolism]	NA|887aa|down_8|NZ_AP017624.1_4103043_4105704_-	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|208aa|down_9|NZ_AP017624.1_4105778_4106402_-	smart00108, B_lectin, Bulb-type mannose-specific lectin
GCF_002355775.1_ASM235577v1	NZ_AP017624	Mycobacterium ulcerans subsp. shinshuense strain ATCC 33728	11	4091823-4091911	10	CRISPRCasFinder	no		DEDDh,cas3,csa3,casR,WYL,cas4,DinG	Orphan	TCACCACCGGCCCCGCCAACACC	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,casR,WYL,cas4,DinG	NA,NA	NA|480aa|up_9|NZ_AP017624.1_4067449_4068889_-	COG3552, CoxE, Protein containing von Willebrand factor type A (vWA) domain [General function prediction only]	NA|292aa|up_8|NZ_AP017624.1_4068902_4069778_-	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|424aa|up_7|NZ_AP017624.1_4069811_4071083_-	PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional	NA|465aa|up_6|NZ_AP017624.1_4071175_4072570_-	pfam00924, MS_channel, Mechanosensitive ion channel	NA|731aa|up_5|NZ_AP017624.1_4072566_4074759_-	cd07302, CHD, cyclase homology domain	NA|467aa|up_4|NZ_AP017624.1_4074924_4076325_-	pfam00924, MS_channel, Mechanosensitive ion channel	NA|700aa|up_3|NZ_AP017624.1_4080609_4082709_+	pfam00934, PE, PE family	NA|681aa|up_2|NZ_AP017624.1_4082821_4084864_-	PRK02628, nadE, NAD synthetase; Reviewed	NA|290aa|up_1|NZ_AP017624.1_4085154_4086024_+	cd01409, SIRT4, SIRT4: Eukaryotic and prokaryotic group (class2) which includes human sirtuin SIRT4 and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation	NA|213aa|up_0|NZ_AP017624.1_4087499_4088138_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|369aa|down_0|NZ_AP017624.1_4093826_4094933_-	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional	NA|480aa|down_1|NZ_AP017624.1_4094932_4096372_-	PRK12296, obgE, GTPase CgtA; Reviewed	NA|89aa|down_2|NZ_AP017624.1_4096475_4096742_-	PRK05435, rpmA, 50S ribosomal protein L27; Validated	NA|104aa|down_3|NZ_AP017624.1_4096759_4097071_-	PRK05573, rplU, 50S ribosomal protein L21; Validated	NA|1016aa|down_4|NZ_AP017624.1_4097343_4100391_-	TIGR00757, Ribonuclease_E/G-like_protein, ribonuclease, Rne/Rng family	NA|137aa|down_5|NZ_AP017624.1_4100717_4101128_-	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|135aa|down_6|NZ_AP017624.1_4101191_4101596_-	pfam14017, DUF4233, Protein of unknown function (DUF4233)	NA|485aa|down_7|NZ_AP017624.1_4101592_4103047_-	COG0285, FolC, Folylpolyglutamate synthase [Coenzyme metabolism]	NA|887aa|down_8|NZ_AP017624.1_4103043_4105704_-	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|208aa|down_9|NZ_AP017624.1_4105778_4106402_-	smart00108, B_lectin, Bulb-type mannose-specific lectin
GCF_002355775.1_ASM235577v1	NZ_AP017624	Mycobacterium ulcerans subsp. shinshuense strain ATCC 33728	12	4108983-4109098	11	CRISPRCasFinder	no		DEDDh,cas3,csa3,casR,WYL,cas4,DinG	Orphan	TCCGGCATGTCGACCGGCGCGATCATGGC	29	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,casR,WYL,cas4,DinG	NA,NA|54aa|down_0|NZ_AP017624.1_4109560_4109722_+	NA|89aa|up_9|NZ_AP017624.1_4096475_4096742_-	PRK05435, rpmA, 50S ribosomal protein L27; Validated	NA|104aa|up_8|NZ_AP017624.1_4096759_4097071_-	PRK05573, rplU, 50S ribosomal protein L21; Validated	NA|1016aa|up_7|NZ_AP017624.1_4097343_4100391_-	TIGR00757, Ribonuclease_E/G-like_protein, ribonuclease, Rne/Rng family	NA|137aa|up_6|NZ_AP017624.1_4100717_4101128_-	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|135aa|up_5|NZ_AP017624.1_4101191_4101596_-	pfam14017, DUF4233, Protein of unknown function (DUF4233)	NA|485aa|up_4|NZ_AP017624.1_4101592_4103047_-	COG0285, FolC, Folylpolyglutamate synthase [Coenzyme metabolism]	NA|887aa|up_3|NZ_AP017624.1_4103043_4105704_-	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|208aa|up_2|NZ_AP017624.1_4105778_4106402_-	smart00108, B_lectin, Bulb-type mannose-specific lectin	NA|199aa|up_1|NZ_AP017624.1_4106485_4107082_-	pfam06078, DUF937, Bacterial protein of unknown function (DUF937)	NA|419aa|up_0|NZ_AP017624.1_4107189_4108446_-	COG3268, COG3268, Uncharacterized conserved protein [Function unknown]	NA|54aa|down_0|NZ_AP017624.1_4109560_4109722_+	NA	NA|104aa|down_1|NZ_AP017624.1_4111285_4111597_+	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated	NA|202aa|down_2|NZ_AP017624.1_4112427_4113033_-	PRK00576, PRK00576, molybdopterin-guanine dinucleotide biosynthesis protein A; Provisional	NA|364aa|down_3|NZ_AP017624.1_4113034_4114126_-	PRK11867, PRK11867, 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Reviewed	NA|654aa|down_4|NZ_AP017624.1_4114174_4116136_-	TIGR03710, OAFO_sf, 2-oxoacid:acceptor oxidoreductase, alpha subunit	NA|410aa|down_5|NZ_AP017624.1_4116468_4117698_-	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|427aa|down_6|NZ_AP017624.1_4117776_4119057_-	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX	NA|525aa|down_7|NZ_AP017624.1_4119783_4121358_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|212aa|down_8|NZ_AP017624.1_4121414_4122050_-	PRK12553, PRK12553, ATP-dependent Clp protease proteolytic subunit; Reviewed	NA|196aa|down_9|NZ_AP017624.1_4122046_4122634_-	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed
GCF_002355775.1_ASM235577v1	NZ_AP017624	Mycobacterium ulcerans subsp. shinshuense strain ATCC 33728	13	4721660-4721873	12	CRISPRCasFinder	no		DEDDh,cas3,csa3,casR,WYL,cas4,DinG	Orphan	GCCGGCCCCACCATTCCCGCCGGCACCGCC	30	0	0	NA	NA	NA	3	3	Orphan	DEDDh,cas3,csa3,casR,WYL,cas4,DinG	NA|64aa|up_7|NZ_AP017624.1_4706804_4706996_-,NA|206aa|down_1|NZ_AP017624.1_4725180_4725798_-	NA|253aa|up_9|NZ_AP017624.1_4702956_4703715_-	PRK01060, PRK01060, endonuclease IV; Provisional	NA|638aa|up_8|NZ_AP017624.1_4704858_4706772_+	pfam04734, Ceramidase_alk, Neutral/alkaline non-lysosomal ceramidase, N-terminal	NA|64aa|up_7|NZ_AP017624.1_4706804_4706996_-	NA	NA|1317aa|up_6|NZ_AP017624.1_4707657_4711608_-	PRK00566, PRK00566, DNA-directed RNA polymerase subunit beta'; Provisional	NA|1177aa|up_5|NZ_AP017624.1_4711660_4715191_-	PRK00405, rpoB, DNA-directed RNA polymerase subunit beta; Reviewed	NA|329aa|up_4|NZ_AP017624.1_4715783_4716770_-	COG1127, Ttg2A, ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|501aa|up_3|NZ_AP017624.1_4716948_4718451_-	COG3670, COG3670, Lignostilbene-alpha,beta-dioxygenase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]	NA|247aa|up_2|NZ_AP017624.1_4718519_4719260_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|131aa|up_1|NZ_AP017624.1_4719323_4719716_-	PRK00157, rplL, 50S ribosomal protein L7/L12; Reviewed	NA|207aa|up_0|NZ_AP017624.1_4719783_4720404_-	PRK00099, rplJ, 50S ribosomal protein L10; Reviewed	NA|303aa|down_0|NZ_AP017624.1_4724265_4725174_-	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|206aa|down_1|NZ_AP017624.1_4725180_4725798_-	NA	NA|1400aa|down_2|NZ_AP017624.1_4725794_4729994_-	cd10786, GH38N_AMII_like, N-terminal catalytic domain of class II alpha-mannosidases and similar proteins; glycoside hydrolase family 38 (GH38)	NA|470aa|down_3|NZ_AP017624.1_4730111_4731521_+	COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis]	NA|310aa|down_4|NZ_AP017624.1_4731571_4732501_+	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase	NA|502aa|down_5|NZ_AP017624.1_4732500_4734006_+	COG0661, AarF, Predicted unusual protein kinase [General function prediction only]	NA|283aa|down_6|NZ_AP017624.1_4734111_4734960_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|287aa|down_7|NZ_AP017624.1_4735056_4735917_+	pfam02353, CMAS, Mycolic acid cyclopropane synthetase	NA|289aa|down_8|NZ_AP017624.1_4736063_4736930_+	pfam02353, CMAS, Mycolic acid cyclopropane synthetase	NA|294aa|down_9|NZ_AP017624.1_4737063_4737945_+	pfam02353, CMAS, Mycolic acid cyclopropane synthetase
GCF_002355775.1_ASM235577v1	NZ_AP017624	Mycobacterium ulcerans subsp. shinshuense strain ATCC 33728	14	4722134-4722268	13	CRISPRCasFinder	no		DEDDh,cas3,csa3,casR,WYL,cas4,DinG	Orphan	GCCGGCCCCACCATTCCCGCCGGCACCGCC	30	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,casR,WYL,cas4,DinG	NA|64aa|up_7|NZ_AP017624.1_4706804_4706996_-,NA|206aa|down_1|NZ_AP017624.1_4725180_4725798_-	NA|253aa|up_9|NZ_AP017624.1_4702956_4703715_-	PRK01060, PRK01060, endonuclease IV; Provisional	NA|638aa|up_8|NZ_AP017624.1_4704858_4706772_+	pfam04734, Ceramidase_alk, Neutral/alkaline non-lysosomal ceramidase, N-terminal	NA|64aa|up_7|NZ_AP017624.1_4706804_4706996_-	NA	NA|1317aa|up_6|NZ_AP017624.1_4707657_4711608_-	PRK00566, PRK00566, DNA-directed RNA polymerase subunit beta'; Provisional	NA|1177aa|up_5|NZ_AP017624.1_4711660_4715191_-	PRK00405, rpoB, DNA-directed RNA polymerase subunit beta; Reviewed	NA|329aa|up_4|NZ_AP017624.1_4715783_4716770_-	COG1127, Ttg2A, ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|501aa|up_3|NZ_AP017624.1_4716948_4718451_-	COG3670, COG3670, Lignostilbene-alpha,beta-dioxygenase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]	NA|247aa|up_2|NZ_AP017624.1_4718519_4719260_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|131aa|up_1|NZ_AP017624.1_4719323_4719716_-	PRK00157, rplL, 50S ribosomal protein L7/L12; Reviewed	NA|207aa|up_0|NZ_AP017624.1_4719783_4720404_-	PRK00099, rplJ, 50S ribosomal protein L10; Reviewed	NA|303aa|down_0|NZ_AP017624.1_4724265_4725174_-	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|206aa|down_1|NZ_AP017624.1_4725180_4725798_-	NA	NA|1400aa|down_2|NZ_AP017624.1_4725794_4729994_-	cd10786, GH38N_AMII_like, N-terminal catalytic domain of class II alpha-mannosidases and similar proteins; glycoside hydrolase family 38 (GH38)	NA|470aa|down_3|NZ_AP017624.1_4730111_4731521_+	COG0154, GatA, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis]	NA|310aa|down_4|NZ_AP017624.1_4731571_4732501_+	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase	NA|502aa|down_5|NZ_AP017624.1_4732500_4734006_+	COG0661, AarF, Predicted unusual protein kinase [General function prediction only]	NA|283aa|down_6|NZ_AP017624.1_4734111_4734960_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|287aa|down_7|NZ_AP017624.1_4735056_4735917_+	pfam02353, CMAS, Mycolic acid cyclopropane synthetase	NA|289aa|down_8|NZ_AP017624.1_4736063_4736930_+	pfam02353, CMAS, Mycolic acid cyclopropane synthetase	NA|294aa|down_9|NZ_AP017624.1_4737063_4737945_+	pfam02353, CMAS, Mycolic acid cyclopropane synthetase
GCF_002355775.1_ASM235577v1	NZ_AP017624	Mycobacterium ulcerans subsp. shinshuense strain ATCC 33728	15	4793421-4793526	14	CRISPRCasFinder	no		DEDDh,cas3,csa3,casR,WYL,cas4,DinG	Orphan	CGGCGGAGTCGAAATCTGCGGCAACGTGAAC	31	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,csa3,casR,WYL,cas4,DinG	NA|354aa|up_9|NZ_AP017624.1_4779294_4780356_+,NA|60aa|up_0|NZ_AP017624.1_4792523_4792703_-,NA|53aa|down_5|NZ_AP017624.1_4807002_4807161_-	NA|354aa|up_9|NZ_AP017624.1_4779294_4780356_+	NA	NA|341aa|up_8|NZ_AP017624.1_4780352_4781375_-	TIGR03086, TIGR03086, TIGR03086 family protein	NA|367aa|up_7|NZ_AP017624.1_4781455_4782556_-	PRK00555, PRK00555, galactokinase; Provisional	NA|363aa|up_6|NZ_AP017624.1_4782552_4783641_-	cd00608, GalT, Galactose-1-phosphate uridyl transferase (GalT): This enzyme plays a key role in galactose metabolism by catalysing the transfer of a uridine 5'-phosphoryl group from UDP-galactose 1-phosphate	NA|390aa|up_5|NZ_AP017624.1_4783741_4784911_+	PRK07588, PRK07588, FAD-binding domain	NA|464aa|up_4|NZ_AP017624.1_4784895_4786287_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|501aa|up_3|NZ_AP017624.1_4786485_4787988_-	PRK08137, PRK08137, amidase; Provisional	NA|275aa|up_2|NZ_AP017624.1_4790524_4791349_-	cd07302, CHD, cyclase homology domain	NA|341aa|up_1|NZ_AP017624.1_4791396_4792419_-	pfam00891, Methyltransf_2, O-methyltransferase	NA|60aa|up_0|NZ_AP017624.1_4792523_4792703_-	NA	NA|407aa|down_0|NZ_AP017624.1_4796164_4797385_+	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism]	NA|271aa|down_1|NZ_AP017624.1_4797506_4798319_+	TIGR03971, short-chain_dehydrogenase/reductase_SDR, SDR family mycofactocin-dependent oxidoreductase	NA|245aa|down_2|NZ_AP017624.1_4799043_4799778_+	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|164aa|down_3|NZ_AP017624.1_4802350_4802842_+	pfam04461, DUF520, Protein of unknown function (DUF520)	NA|179aa|down_4|NZ_AP017624.1_4802943_4803480_+	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|53aa|down_5|NZ_AP017624.1_4807002_4807161_-	NA	NA|503aa|down_6|NZ_AP017624.1_4807368_4808877_+	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|499aa|down_7|NZ_AP017624.1_4808905_4810402_-	pfam13365, Trypsin_2, Trypsin-like peptidase domain	NA|342aa|down_8|NZ_AP017624.1_4810561_4811587_+	PRK12439, PRK12439, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional	NA|518aa|down_9|NZ_AP017624.1_4811819_4813373_+	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
