The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_AP017630	Clostridium perfringens strain CBA7123	3088370	769804	779990	3088370		Synechococcus_phage(28.57%)	7	NA	NA
WP_096515378.1|769804_773605_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	25.0	3.6e-32
WP_003453078.1|773916_774396_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	47.4	2.6e-28
WP_096515380.1|774395_775103_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4SM18	Cyanophage	43.4	1.1e-46
WP_096515382.1|775422_776868_+	amidophosphoribosyltransferase	NA	A0A1B1ISH6	uncultured_Mediterranean_phage	32.7	1.0e-56
WP_096515384.1|776868_777870_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3FGG1	Synechococcus_phage	49.0	6.7e-71
WP_096515386.1|777857_778472_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.6	8.4e-24
WP_096515388.1|778484_779990_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	46.8	3.0e-67
>prophage 2
NZ_AP017630	Clostridium perfringens strain CBA7123	3088370	1769972	1781881	3088370	tRNA	Clostridium_phage(22.22%)	10	NA	NA
WP_003457168.1|1769972_1771010_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	36.0	5.4e-31
WP_096516234.1|1771594_1772098_-	QueT transporter family protein	NA	E7DN70	Pneumococcus_phage	39.4	2.2e-14
WP_096516235.1|1772427_1773303_-	MBL fold metallo-hydrolase	NA	Q332C0	Clostridium_botulinum_C_phage	50.2	8.2e-65
WP_096516236.1|1773473_1774799_-	sensor histidine kinase	NA	X5JAC0	Clostridium_phage	37.5	6.8e-71
WP_096516237.1|1774792_1775503_-	response regulator transcription factor	NA	A0A2R2ZGH8	Clostridioides_phage	32.6	1.9e-32
WP_096516238.1|1775767_1776781_-	N-acetylmuramoyl-L-alanine amidase	NA	Q8SBN4	Clostridium_phage	62.8	7.4e-118
WP_096516239.1|1776873_1777161_-	thiamine-binding protein	NA	NA	NA	NA	NA
WP_096516240.1|1777373_1778387_-	DUF348 domain-containing protein	NA	A0A143FMI2	Bacillus_phage	52.0	3.5e-19
WP_096516241.1|1778812_1780111_-	uracil permease	NA	Q9KX94	Enterobacteria_phage	38.8	5.3e-68
WP_096516242.1|1780297_1781881_+	ATP-binding cassette domain-containing protein	NA	A0A1V0SGN0	Hokovirus	25.6	6.5e-44
>prophage 3
NZ_AP017630	Clostridium perfringens strain CBA7123	3088370	2038062	2107933	3088370	terminase,holin,tail,head,capsid,protease,portal,tRNA,integrase	Clostridium_phage(69.23%)	76	2081337:2081354	2096241:2096258
WP_096516422.1|2038062_2038992_-|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	27.0	2.0e-05
WP_096516423.1|2039011_2039455_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.0	2.5e-17
WP_096516424.1|2039468_2041664_-	primosomal protein N'	NA	NA	NA	NA	NA
WP_003471651.1|2041702_2042890_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	33.6	3.0e-46
WP_003449449.1|2042895_2043108_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_042262332.1|2043088_2043739_-	guanylate kinase	NA	A0A143DIC6	Abalone_herpesvirus	37.0	3.3e-26
WP_003458433.1|2043728_2043998_-	DUF370 domain-containing protein	NA	NA	NA	NA	NA
WP_096516425.1|2044011_2044896_-	YicC family protein	NA	NA	NA	NA	NA
WP_096516426.1|2045111_2046509_-	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	35.1	2.6e-57
WP_096516427.1|2046766_2047750_-	asparaginase	NA	NA	NA	NA	NA
WP_096516428.1|2048098_2049574_-	stage IV sporulation protein A	NA	NA	NA	NA	NA
WP_003458497.1|2049909_2050905_-	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_096516429.1|2050909_2052226_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_003458424.1|2052228_2053566_-	radical SAM protein	NA	NA	NA	NA	NA
WP_004458161.1|2053892_2055608_-	HAMP domain-containing protein	NA	W8CYF6	Bacillus_phage	39.1	1.5e-38
WP_096516430.1|2055621_2056326_-	polyphenol oxidase family protein	NA	NA	NA	NA	NA
WP_003449440.1|2056491_2056941_-	transcriptional repressor NrdR	NA	NA	NA	NA	NA
WP_096516431.1|2057002_2057275_-	YlmC/YmxH family sporulation protein	NA	NA	NA	NA	NA
WP_003449454.1|2057416_2058190_-	RNA polymerase sporulation sigma factor SigG	NA	A0A0A0RV91	Bacillus_phage	41.4	6.8e-47
WP_003449468.1|2058264_2058972_-	RNA polymerase sporulation sigma factor SigE	NA	A0A2H4JC68	uncultured_Caudovirales_phage	45.0	6.5e-20
WP_096516432.1|2058985_2059792_-	sigma-E processing peptidase SpoIIGA	NA	NA	NA	NA	NA
WP_157734682.1|2059817_2060015_-	hypothetical protein	NA	NA	NA	NA	NA
WP_096516434.1|2060196_2061342_-	cell division protein FtsZ	NA	NA	NA	NA	NA
WP_096516435.1|2061355_2062594_-	cell division protein FtsA	NA	NA	NA	NA	NA
WP_096516436.1|2062671_2063724_-	type IV pilus twitching motility protein PilT	NA	NA	NA	NA	NA
WP_096516437.1|2064282_2064684_-	hypothetical protein	NA	I2E8X1	Clostridium_phage	61.5	3.6e-36
WP_096516438.1|2064772_2065828_-	glycosyl hydrolase family 25	NA	Q0SPG7	Clostridium_phage	38.5	9.6e-60
WP_096516439.1|2065877_2066315_-|holin	phage holin family protein	holin	M9Q253	Clostridium_phage	74.4	1.1e-54
WP_096516440.1|2066356_2068048_-|tail	phage tail protein	tail	A0A0A7RUI9	Clostridium_phage	51.7	2.9e-98
WP_096516441.1|2068059_2068623_-	hypothetical protein	NA	NA	NA	NA	NA
WP_096516442.1|2068624_2069329_-|tail	phage tail family protein	tail	I2E8W2	Clostridium_phage	40.9	5.3e-30
WP_096516443.1|2069342_2072300_-|tail	phage tail tape measure protein	tail	Q8SBP1	Clostridium_phage	64.1	5.8e-155
WP_096516444.1|2072841_2073159_-	hypothetical protein	NA	I2E8W0	Clostridium_phage	51.4	9.0e-22
WP_096516445.1|2073219_2073861_-|tail	phage tail protein	tail	Q8SBP3	Clostridium_phage	66.0	1.2e-68
WP_096517105.1|2073882_2074173_-	hypothetical protein	NA	Q8SBP4	Clostridium_phage	68.4	4.2e-34
WP_096516446.1|2074237_2074681_-	HK97 gp10 family phage protein	NA	Q8SBP5	Clostridium_phage	70.4	1.1e-54
WP_096516447.1|2074681_2075008_-|head	phage head closure protein	head	I2E8V6	Clostridium_phage	72.6	3.7e-39
WP_096516448.1|2075000_2075279_-|head,tail	phage gp6-like head-tail connector protein	head,tail	Q8SBP7	Clostridium_phage	71.7	2.6e-33
WP_096516449.1|2075297_2076527_-|capsid	phage major capsid protein	capsid	Q8SBP8	Clostridium_phage	78.7	5.7e-157
WP_096516450.1|2076568_2077174_-|head,protease	HK97 family phage prohead protease	head,protease	Q8SBP9	Clostridium_phage	87.6	1.9e-97
WP_096516451.1|2077163_2078411_-|portal	phage portal protein	portal	Q8SBQ1	Clostridium_phage	78.9	1.6e-199
WP_096516452.1|2078411_2080151_-|terminase	terminase large subunit	terminase	Q8SBQ2	Clostridium_phage	86.3	7.3e-307
WP_096516453.1|2080143_2080647_-|terminase	phage terminase small subunit P27 family	terminase	Q8SBQ3	Clostridium_phage	85.0	5.9e-76
WP_096516454.1|2080746_2081169_-	HNH endonuclease	NA	Q8SBK4	Clostridium_phage	80.7	2.4e-62
WP_096516455.1|2081149_2081446_-	hypothetical protein	NA	NA	NA	NA	NA
2081337:2081354	attL	TTAAATATAACTCTATAA	NA	NA	NA	NA
WP_172861110.1|2081450_2081624_-	hypothetical protein	NA	A0A2K9VC64	Lactobacillus_phage	66.7	8.1e-09
WP_096516456.1|2081793_2082339_-|integrase	site-specific integrase	integrase	Q8SBK8	Clostridium_phage	71.8	9.0e-70
WP_096516457.1|2082335_2082542_-	hypothetical protein	NA	NA	NA	NA	NA
WP_096516458.1|2082682_2083144_-	sigma-70 family RNA polymerase sigma factor	NA	A0A0A8WFM4	Clostridium_phage	39.7	1.2e-14
WP_096516459.1|2083273_2084038_-	phosphoadenosine phosphosulfate reductase family protein	NA	Q24LD4	Clostridium_phage	59.6	1.8e-76
WP_096517106.1|2084049_2084325_-	winged helix-turn-helix transcriptional regulator	NA	M9Q2I9	Clostridium_phage	78.0	2.6e-33
WP_096516460.1|2084392_2084782_-	single-stranded DNA-binding protein	NA	Q8SBL5	Clostridium_phage	64.5	8.7e-43
WP_157734683.1|2084796_2084943_-	hypothetical protein	NA	NA	NA	NA	NA
WP_096516461.1|2084954_2086235_-	DNA helicase	NA	Q8SBL9	Clostridium_phage	82.4	3.5e-197
WP_096516462.1|2086247_2086988_-	conserved phage C-terminal domain-containing protein	NA	Q8SBM0	Clostridium_phage	56.1	6.3e-66
WP_157734684.1|2087014_2087173_-	hypothetical protein	NA	NA	NA	NA	NA
WP_096516463.1|2087175_2087355_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157734685.1|2087654_2087798_-	hypothetical protein	NA	NA	NA	NA	NA
WP_096516464.1|2087933_2088308_+	helix-turn-helix transcriptional regulator	NA	A0A0A8WF83	Clostridium_phage	46.3	1.9e-23
WP_096516465.1|2088647_2088857_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_096516466.1|2088944_2090453_+	recombinase family protein	NA	I2E8X2	Clostridium_phage	81.1	4.6e-233
WP_096516467.1|2091011_2092676_-	penicillin-binding protein 2	NA	NA	NA	NA	NA
WP_003459577.1|2092793_2093420_-	uridine kinase	NA	A0A2K9L505	Tupanvirus	43.3	2.8e-35
WP_096516468.1|2093419_2094649_-	U32 family peptidase	NA	Q6DW11	Phage_TP	39.9	8.8e-57
WP_096516469.1|2094654_2095299_-	O-methyltransferase	NA	NA	NA	NA	NA
WP_096516470.1|2095314_2096343_-	endolytic transglycosylase MltG	NA	NA	NA	NA	NA
2096241:2096258	attR	TTATAGAGTTATATTTAA	NA	NA	NA	NA
WP_096516471.1|2096471_2098304_-	translational GTPase TypA	NA	NA	NA	NA	NA
WP_096516472.1|2098460_2100128_-	ribonuclease J	NA	NA	NA	NA	NA
WP_003451087.1|2100198_2100651_-	transcriptional repressor	NA	NA	NA	NA	NA
WP_003459598.1|2100671_2100926_-	DUF1292 domain-containing protein	NA	NA	NA	NA	NA
WP_003459573.1|2100941_2101355_-	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_003451703.1|2101402_2101660_-	IreB family regulatory phosphoprotein	NA	NA	NA	NA	NA
WP_096516473.1|2101803_2104443_-|tRNA	alanine--tRNA ligase	tRNA	A0A2K9L3D8	Tupanvirus	33.3	1.6e-63
WP_096516474.1|2105035_2106073_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_096516475.1|2106098_2106572_-	PRC-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_003459581.1|2106853_2107933_-|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
>prophage 1
NZ_AP017631	Clostridium perfringens strain CBA7123 plasmid pCBA7123-01, complete sequence	46640	0	10000	46640	integrase	Bacillus_phage(33.33%)	11	NA	NA
WP_096517116.1|789_1074_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096517117.1|1074_1386_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096517118.1|1761_2562_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_096517119.1|2625_4215_+	DUF87 domain-containing protein	NA	M4ZS25	Bacillus_phage	29.4	3.4e-16
WP_164792577.1|4234_4399_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096517120.1|4391_5471_+	conjugal transfer protein	NA	NA	NA	NA	NA
WP_096517121.1|5482_5818_+	TcpD	NA	NA	NA	NA	NA
WP_096517122.1|5829_6207_+	conjugal transfer protein	NA	NA	NA	NA	NA
WP_096517123.1|6252_6471_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096517124.1|6472_8995_+	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	27.8	6.4e-70
WP_096517125.1|8995_10000_+	C40 family peptidase	NA	A0A0A7RUS8	Clostridium_phage	50.7	1.4e-36
>prophage 2
NZ_AP017631	Clostridium perfringens strain CBA7123 plasmid pCBA7123-01, complete sequence	46640	15129	16149	46640		Bacillus_phage(100.0%)	1	NA	NA
WP_096517127.1|15129_16149_+	DNA (cytosine-5-)-methyltransferase	NA	A0A0E3DF50	Bacillus_phage	39.6	4.3e-57
>prophage 3
NZ_AP017631	Clostridium perfringens strain CBA7123 plasmid pCBA7123-01, complete sequence	46640	22334	31582	46640	transposase	Streptococcus_phage(50.0%)	6	NA	NA
WP_003474254.1|22334_23192_+|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	E9P639	Wolbachia_endosymbiont_wVitB_of_Nasonia_vitripennis_phage	30.3	1.6e-17
WP_003479690.1|24073_25336_+	tetracycline efflux MFS transporter TetA(P)	NA	NA	NA	NA	NA
WP_003479689.1|25319_27278_+	tetracycline resistance ribosomal protection protein TetB(P)	NA	D0R0F5	Streptococcus_phage	40.4	1.6e-124
WP_003479687.1|28198_29068_+	AraC family transcriptional regulator	NA	D0R0F8	Streptococcus_phage	28.7	1.4e-27
WP_003479686.1|29615_29768_+	zinc-ribbon domain-containing protein	NA	NA	NA	NA	NA
WP_096517130.1|30847_31582_+	recombinase family protein	NA	Q1MVP4	Enterobacteria_phage	39.5	1.4e-17
>prophage 4
NZ_AP017631	Clostridium perfringens strain CBA7123 plasmid pCBA7123-01, complete sequence	46640	36380	41877	46640		Clostridium_phage(80.0%)	8	NA	NA
WP_003464348.1|36380_36632_-	hypothetical protein	NA	Q0SPH5	Clostridium_phage	51.9	1.9e-11
WP_003453385.1|36634_37480_-	ParM/StbA family protein	NA	Q0SPH6	Clostridium_phage	77.2	7.5e-124
WP_096517134.1|37988_38801_+	plasmid replication protein	NA	Q0SPH7	Clostridium_phage	54.2	2.8e-67
WP_096517142.1|39041_39437_-	helix-turn-helix transcriptional regulator	NA	A0A0A8WJ60	Clostridium_phage	43.8	2.4e-08
WP_015141743.1|39595_39802_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_011428905.1|39898_40273_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_096517135.1|40334_41435_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096517136.1|41502_41877_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A291I9M9	Lactobacillus_phage	33.3	4.5e-12
