assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002355875.1_ASM235587v1	NZ_AP014623	Pseudomonas chlororaphis subsp. aurantiaca strain StFRB508	1	231940-232041	1	CRISPRCasFinder	no		DEDDh,WYL,DinG,csa3,cas3	Orphan	GCGCTGATTGCGCCGGGCCCGGT	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,DinG,csa3,cas3	NA|147aa|up_0|NZ_AP014623.1_231445_231886_+,NA	NA|252aa|up_9|NZ_AP014623.1_223304_224060_+	COG0834, HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms]	NA|253aa|up_8|NZ_AP014623.1_224191_224950_-	pfam04748, Polysacc_deac_2, Divergent polysaccharide deacetylase	NA|437aa|up_7|NZ_AP014623.1_225116_226427_-	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane]	NA|429aa|up_6|NZ_AP014623.1_226458_227745_-	COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning]	NA|510aa|up_5|NZ_AP014623.1_227881_229411_-	PRK05434, PRK05434, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA|138aa|up_4|NZ_AP014623.1_229562_229976_+	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|85aa|up_3|NZ_AP014623.1_229977_230232_+	TIGR02181, GRX_bact, Glutaredoxin, GrxC family	NA|161aa|up_2|NZ_AP014623.1_230288_230771_+	PRK05751, PRK05751, preprotein translocase subunit SecB; Validated	NA|152aa|up_1|NZ_AP014623.1_230991_231447_-	COG0219, CspR, Predicted rRNA methylase (SpoU class) [Translation, ribosomal structure and biogenesis]	NA|147aa|up_0|NZ_AP014623.1_231445_231886_+	NA	NA|362aa|down_0|NZ_AP014623.1_234112_235198_-	COG3852, NtrB, Signal transduction histidine kinase, nitrogen specific [Signal transduction mechanisms]	NA|471aa|down_1|NZ_AP014623.1_235556_236969_-	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily	NA|300aa|down_2|NZ_AP014623.1_237164_238064_-	cd08448, PBP2_LTTR_aromatics_like_2, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator similar to regulators involved in the catabolism of aromatic compounds, contains type 2 periplasmic binding fold	NA|574aa|down_3|NZ_AP014623.1_238176_239898_+	cd01154, AidB, Proteins involved in DNA damage response, similar to the AidB gene product	NA|396aa|down_4|NZ_AP014623.1_239930_241118_+	pfam02515, CoA_transf_3, CoA-transferase family III	NA|265aa|down_5|NZ_AP014623.1_241186_241981_+	PRK08138, PRK08138, enoyl-CoA hydratase; Provisional	NA|509aa|down_6|NZ_AP014623.1_241977_243504_+	PRK08268, PRK08268, 3-hydroxy-acyl-CoA dehydrogenase; Validated	NA|401aa|down_7|NZ_AP014623.1_243539_244742_+	PRK08131, PRK08131, 3-oxoadipyl-CoA thiolase	NA|372aa|down_8|NZ_AP014623.1_244883_245999_+	COG2169, Ada, Adenosine deaminase [Nucleotide transport and metabolism]	NA|172aa|down_9|NZ_AP014623.1_245970_246486_-	pfam13511, DUF4124, Domain of unknown function (DUF4124)
GCF_002355875.1_ASM235587v1	NZ_AP014623	Pseudomonas chlororaphis subsp. aurantiaca strain StFRB508	2	787853-788601	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no		DEDDh,WYL,DinG,csa3,cas3	Orphan	GTTCACTGCCGAATAGGCAGCTTAGAAA,GTTCACTGCCGAATAGGCAGCTTAGAAA,GTTCACTGCCGAATAGGCAGCTTAGAAA	28,28,28	1	1	788482-788513	NZ_AP014623.1_2112585-2112616	I-F:I-F:I-F	11,12,12	12	Orphan	DEDDh,WYL,DinG,csa3,cas3	NA|124aa|up_0|NZ_AP014623.1_787239_787611_+,NA|193aa|down_1|NZ_AP014623.1_790100_790679_+	NA|735aa|up_9|NZ_AP014623.1_772788_774993_+	pfam07793, DUF1631, Protein of unknown function (DUF1631)	NA|187aa|up_8|NZ_AP014623.1_775055_775616_+	PRK11789, PRK11789, 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA|279aa|up_7|NZ_AP014623.1_775612_776449_+	COG3725, AmpE, Membrane protein required for beta-lactamase induction [Defense mechanisms]	NA|677aa|up_6|NZ_AP014623.1_776655_778686_+	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|263aa|up_5|NZ_AP014623.1_778687_779476_-	cd01310, TatD_DNAse, TatD like proteins;  E	NA|332aa|up_4|NZ_AP014623.1_779478_780474_-	PRK11303, PRK11303, catabolite repressor/activator	NA|954aa|up_3|NZ_AP014623.1_780770_783632_+	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]	NA|314aa|up_2|NZ_AP014623.1_783631_784573_+	TIGR03828, pfkB, 1-phosphofructokinase	NA|581aa|up_1|NZ_AP014623.1_784584_786327_+	PRK10712, PRK10712, PTS system fructose-specific transporter subunits IIBC; Provisional	NA|124aa|up_0|NZ_AP014623.1_787239_787611_+	NA	NA|424aa|down_0|NZ_AP014623.1_788848_790120_+	cd14743, PAAR_CT_1, proline-alanine-alanine-arginine (PAAR) domain with C-terminal extension	NA|193aa|down_1|NZ_AP014623.1_790100_790679_+	NA	NA|514aa|down_2|NZ_AP014623.1_790991_792533_+	COG3540, PhoD, Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]	NA|843aa|down_3|NZ_AP014623.1_792652_795181_-	COG0369, CysJ, Sulfite reductase, alpha subunit (flavoprotein) [Inorganic ion transport and metabolism]	NA|758aa|down_4|NZ_AP014623.1_795458_797732_-	COG4774, Fiu, Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]	NA|227aa|down_5|NZ_AP014623.1_797937_798618_+	PRK05467, PRK05467, Fe(II)-dependent oxygenase superfamily protein; Provisional	NA|263aa|down_6|NZ_AP014623.1_798621_799410_+	sd00010, SLR, Sel1-like repeat	NA|388aa|down_7|NZ_AP014623.1_799586_800750_-	cd00622, PLPDE_III_ODC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Ornithine Decarboxylase	NA|386aa|down_8|NZ_AP014623.1_801335_802493_-	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]	NA|218aa|down_9|NZ_AP014623.1_802489_803143_-	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism]
GCF_002355875.1_ASM235587v1	NZ_AP014623	Pseudomonas chlororaphis subsp. aurantiaca strain StFRB508	3	3143548-3143641	3	CRISPRCasFinder	no		DEDDh,WYL,DinG,csa3,cas3	Orphan	GCGGCTGCTGCGCAGCCGATCGCA	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,DinG,csa3,cas3	NA,NA	NA|322aa|up_9|NZ_AP014623.1_3130495_3131461_-	cd02525, Succinoglycan_BP_ExoA, ExoA is involved in the biosynthesis of succinoglycan	NA|453aa|up_8|NZ_AP014623.1_3132605_3133964_-	COG3307, RfaL, Lipid A core - O-antigen ligase and related enzymes [Cell envelope biogenesis, outer membrane]	NA|355aa|up_7|NZ_AP014623.1_3133960_3135025_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|523aa|up_6|NZ_AP014623.1_3135048_3136617_-	COG3206, GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis [Cell envelope biogenesis, outer membrane]	NA|338aa|up_5|NZ_AP014623.1_3136628_3137642_-	pfam02563, Poly_export, Polysaccharide biosynthesis/export protein	NA|215aa|up_4|NZ_AP014623.1_3137664_3138309_-	cd05387, BY-kinase, bacterial tyrosine-kinase	NA|258aa|up_3|NZ_AP014623.1_3138310_3139084_-	pfam02397, Bac_transf, Bacterial sugar transferase	NA|342aa|up_2|NZ_AP014623.1_3139158_3140184_-	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs	NA|451aa|up_1|NZ_AP014623.1_3140180_3141533_-	COG1004, Ugd, Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]	NA|439aa|up_0|NZ_AP014623.1_3142173_3143490_+	pfam03573, OprD, outer membrane porin, OprD family	NA|206aa|down_0|NZ_AP014623.1_3144169_3144787_-	COG4764, COG4764, Uncharacterized protein conserved in bacteria [Function unknown]	NA|313aa|down_1|NZ_AP014623.1_3144837_3145776_-	cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate	NA|503aa|down_2|NZ_AP014623.1_3145778_3147287_-	cd07809, FGGY_D-XK_1, D-xylulose kinases, subgroup 1; members of the FGGY family of carbohydrate kinases	NA|494aa|down_3|NZ_AP014623.1_3148051_3149533_-	COG0246, MtlD, Mannitol-1-phosphate/altronate dehydrogenases [Carbohydrate transport and metabolism]	NA|368aa|down_4|NZ_AP014623.1_3149547_3150651_-	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA|277aa|down_5|NZ_AP014623.1_3150831_3151662_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|309aa|down_6|NZ_AP014623.1_3151672_3152599_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|437aa|down_7|NZ_AP014623.1_3152756_3154067_-	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold	NA|736aa|down_8|NZ_AP014623.1_3154407_3156615_-	COG4774, Fiu, Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]	NA|339aa|down_9|NZ_AP014623.1_3156872_3157889_+	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term
GCF_002355875.1_ASM235587v1	NZ_AP014623	Pseudomonas chlororaphis subsp. aurantiaca strain StFRB508	4	3686245-3686382	4	CRISPRCasFinder	no		DEDDh,WYL,DinG,csa3,cas3	Orphan	CGCAGCAGGCGCAAAACCTGAGATCGCGTTGGCTCTGGATAACCGC	46	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,DinG,csa3,cas3	NA,NA	NA|365aa|up_9|NZ_AP014623.1_3676320_3677415_-	pfam06674, DUF1176, Protein of unknown function (DUF1176)	NA|304aa|up_8|NZ_AP014623.1_3677486_3678398_-	TIGR02297, AraC-type_DNA-binding_domain-containing_protein, 4-hydroxyphenylacetate catabolism regulatory protein HpaA	NA|228aa|up_7|NZ_AP014623.1_3678622_3679306_+	TIGR02305, HpaG-N-term, 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit	NA|267aa|up_6|NZ_AP014623.1_3679315_3680116_+	TIGR02303, decarboxylase_divided_with_OB2865, 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit	NA|487aa|up_5|NZ_AP014623.1_3680116_3681577_+	cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like	NA|286aa|up_4|NZ_AP014623.1_3681741_3682599_+	TIGR02298, putative_34-dihydroxyphenylacetate_23-dioxygenase, 3,4-dihydroxyphenylacetate 2,3-dioxygenase	NA|130aa|up_3|NZ_AP014623.1_3682689_3683079_+	pfam02962, CHMI, 5-carboxymethyl-2-hydroxymuconate isomerase	NA|436aa|up_2|NZ_AP014623.1_3683269_3684577_+	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily	NA|268aa|up_1|NZ_AP014623.1_3684579_3685383_+	TIGR02312, 2-keto-4-pentenoate_hydratase, 2-oxo-hepta-3-ene-1,7-dioic acid hydratase	NA|267aa|up_0|NZ_AP014623.1_3685394_3686195_+	TIGR02311, 24-dihydroxyhept-2-ene-17-dioic_acid_aldolase, 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase	NA|381aa|down_0|NZ_AP014623.1_3686671_3687814_-	pfam02595, Gly_kinase, Glycerate kinase family	NA|377aa|down_1|NZ_AP014623.1_3688109_3689240_-	COG3835, CdaR, Sugar diacid utilization regulator [Transcription / Signal transduction mechanisms]	NA|437aa|down_2|NZ_AP014623.1_3689421_3690732_+	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily	NA|634aa|down_3|NZ_AP014623.1_3690936_3692838_+	PRK07529, PRK07529, AMP-binding domain protein; Validated	NA|137aa|down_4|NZ_AP014623.1_3693096_3693507_-	cd07245, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|300aa|down_5|NZ_AP014623.1_3693667_3694567_+	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|336aa|down_6|NZ_AP014623.1_3694670_3695678_+	cd19087, AKR_AKR12A1_B1_C1, AKR12A, AKR12B,  AKR12C families of aldo-keto reductase (AKR)	NA|294aa|down_7|NZ_AP014623.1_3695864_3696746_+	COG2962, RarD, Predicted permeases [General function prediction only]	NA|141aa|down_8|NZ_AP014623.1_3696894_3697317_-	TIGR02337, Homoprotocatechuate_degradative_operon_repressor	NA|359aa|down_9|NZ_AP014623.1_3697461_3698538_-	TIGR01263, 4-hydroxyphenylpyruvate_dioxygenase, 4-hydroxyphenylpyruvate dioxygenase
