assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002386365.1_ASM238636v1	NZ_CP023510	Rothia mucilaginosa strain FDAARGOS_369 chromosome, complete genome	1	365173-365261	1	CRISPRCasFinder	no	DEDDh	csa3,RT,WYL,DEDDh,csb3,cas3,csb2gr5,cas7,cas2,DinG,c2c9_V-U4	Unclear	GCACTCCCCCGCGAGCGGCGTCCGGTATGC	30	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,WYL,DEDDh,csb3,cas3,csb2gr5,cas7,cas2,DinG,c2c9_V-U4	NA,NA	NA|300aa|up_9|NZ_CP023510.1_351719_352619_+	cd01038, Endonuclease_DUF559, Domain of unknown function, appears to be related to a diverse group of endonucleases	NA|370aa|up_8|NZ_CP023510.1_352705_353815_-	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional	NA|469aa|up_7|NZ_CP023510.1_353995_355402_+	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|272aa|up_6|NZ_CP023510.1_355791_356607_-	PRK00278, trpC, indole-3-glycerol phosphate synthase TrpC	NA|537aa|up_5|NZ_CP023510.1_356621_358232_-	PRK13571, PRK13571, anthranilate synthase component I; Provisional	NA|159aa|up_4|NZ_CP023510.1_358511_358988_-	PRK00061, ribH, 6,7-dimethyl-8-ribityllumazine synthase; Provisional	NA|274aa|up_3|NZ_CP023510.1_359044_359866_-	cd00641, GTP_cyclohydro2, GTP cyclohydrolase II (RibA)	NA|431aa|up_2|NZ_CP023510.1_359874_361167_-	pfam00926, DHBP_synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase	NA|437aa|up_1|NZ_CP023510.1_361431_362742_-	TIGR00326, eubact_ribD, riboflavin biosynthesis protein RibD	NA|244aa|up_0|NZ_CP023510.1_362742_363474_-	pfam04973, NMN_transporter, Nicotinamide mononucleotide transporter	NA|424aa|down_0|NZ_CP023510.1_365361_366633_-	TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II	NA|81aa|down_1|NZ_CP023510.1_366849_367092_-	PRK00982, acpP, acyl carrier protein; Provisional	NA|342aa|down_2|NZ_CP023510.1_367294_368320_-	PRK09352, PRK09352, beta-ketoacyl-ACP synthase 3	NA|300aa|down_3|NZ_CP023510.1_368437_369337_-	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]	NA|363aa|down_4|NZ_CP023510.1_369676_370765_-	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed	NA|595aa|down_5|NZ_CP023510.1_371051_372836_-	pfam02481, DNA_processg_A, DNA recombination-mediator protein A	NA|513aa|down_6|NZ_CP023510.1_372882_374421_-	COG0606, COG0606, Predicted ATPase with chaperone activity [Posttranslational modification, protein turnover, chaperones]	NA|133aa|down_7|NZ_CP023510.1_374420_374819_-	PRK12497, PRK12497, YraN family protein	NA|109aa|down_8|NZ_CP023510.1_375180_375507_-	pfam10611, DUF2469, Protein of unknown function (DUF2469)	NA|274aa|down_9|NZ_CP023510.1_375599_376421_-	cd07182, RNase_HII_bacteria_HII_like, Bacterial Ribonuclease HII-like
GCF_002386365.1_ASM238636v1	NZ_CP023510	Rothia mucilaginosa strain FDAARGOS_369 chromosome, complete genome	2	434971-435723	2,1	CRISPRCasFinder,CRT	no	csb3,cas3,csb2gr5,cas7,cas2	csa3,RT,WYL,DEDDh,csb3,cas3,csb2gr5,cas7,cas2,DinG,c2c9_V-U4	Unclear	CCTCAATGAAAGTCCCCACCCGAAG,CCTCAATGAAAGTCCCCNCCCGAAGGCGGGGAAAT	25,35	0	0	NA	NA	NA:NA	10,10	10	Unclear	csa3,RT,WYL,DEDDh,csb3,cas3,csb2gr5,cas7,cas2,DinG,c2c9_V-U4	NA|235aa|up_9|NZ_CP023510.1_416062_416767_+,NA|290aa|up_8|NZ_CP023510.1_416940_417810_+,NA|360aa|up_5|NZ_CP023510.1_424823_425903_-,NA|397aa|down_3|NZ_CP023510.1_441664_442855_+,NA|243aa|down_4|NZ_CP023510.1_443036_443765_+	NA|235aa|up_9|NZ_CP023510.1_416062_416767_+	NA	NA|290aa|up_8|NZ_CP023510.1_416940_417810_+	NA	NA|731aa|up_7|NZ_CP023510.1_418471_420664_-	cd05819, NHL, NHL repeat unit of beta-propeller proteins	NA|1030aa|up_6|NZ_CP023510.1_421242_424332_-	cd05819, NHL, NHL repeat unit of beta-propeller proteins	NA|360aa|up_5|NZ_CP023510.1_424823_425903_-	NA	NA|252aa|up_4|NZ_CP023510.1_426392_427148_+	pfam04973, NMN_transporter, Nicotinamide mononucleotide transporter	csb3|355aa|up_3|NZ_CP023510.1_427300_428365_-	cd09764, Csb3_I-U, CRISPR/Cas system-associated RAMP superfamily protein Csb3	cas3|932aa|up_2|NZ_CP023510.1_428364_431160_-	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc	csb2gr5|530aa|up_1|NZ_CP023510.1_431152_432742_-	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system	cas7|411aa|up_0|NZ_CP023510.1_432743_433976_-	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053)	cas2|100aa|down_0|NZ_CP023510.1_435822_436122_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|352aa|down_1|NZ_CP023510.1_439140_440196_-	COG1485, COG1485, Predicted ATPase [General function prediction only]	NA|239aa|down_2|NZ_CP023510.1_440933_441650_+	PRK11855, PRK11855, dihydrolipoamide acetyltransferase; Reviewed	NA|397aa|down_3|NZ_CP023510.1_441664_442855_+	NA	NA|243aa|down_4|NZ_CP023510.1_443036_443765_+	NA	NA|337aa|down_5|NZ_CP023510.1_444401_445412_+	COG2855, COG2855, Predicted membrane protein [Function unknown]	NA|167aa|down_6|NZ_CP023510.1_445662_446163_+	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins	NA|159aa|down_7|NZ_CP023510.1_446250_446727_+	pfam01641, SelR, SelR domain	NA|422aa|down_8|NZ_CP023510.1_446927_448193_+	COG0349, Rnd, Ribonuclease D [Translation, ribosomal structure and biogenesis]	NA|177aa|down_9|NZ_CP023510.1_448405_448936_+	cd03467, Rieske, Rieske domain; a [2Fe-2S] cluster binding domain commonly found in Rieske non-heme iron oxygenase (RO) systems such as naphthalene and biphenyl dioxygenases, as well as in plant/cyanobacterial chloroplast b6f and mitochondrial cytochrome bc(1) complexes
GCF_002386365.1_ASM238636v1	NZ_CP023510	Rothia mucilaginosa strain FDAARGOS_369 chromosome, complete genome	3	436776-437604	3,2,1	CRISPRCasFinder,CRT,PILER-CR	no	csb3,cas3,csb2gr5,cas7,cas2	csa3,RT,WYL,DEDDh,csb3,cas3,csb2gr5,cas7,cas2,DinG,c2c9_V-U4	Unclear	GCCTCAATGAAAGCCCTTCCCAGAAGGAAGGGAAAT,CCTCAATGAAAGCCCNTCCNAAAA,GGCCTCAATGAAAGCCCTTCCGAAAAAGAAGGGAAA	36,24,36	0	0	NA	NA	NA:NA:NA	11,11,3	11	Unclear	csa3,RT,WYL,DEDDh,csb3,cas3,csb2gr5,cas7,cas2,DinG,c2c9_V-U4	NA|290aa|up_9|NZ_CP023510.1_416940_417810_+,NA|360aa|up_6|NZ_CP023510.1_424823_425903_-,NA|397aa|down_2|NZ_CP023510.1_441664_442855_+,NA|243aa|down_3|NZ_CP023510.1_443036_443765_+	NA|290aa|up_9|NZ_CP023510.1_416940_417810_+	NA	NA|731aa|up_8|NZ_CP023510.1_418471_420664_-	cd05819, NHL, NHL repeat unit of beta-propeller proteins	NA|1030aa|up_7|NZ_CP023510.1_421242_424332_-	cd05819, NHL, NHL repeat unit of beta-propeller proteins	NA|360aa|up_6|NZ_CP023510.1_424823_425903_-	NA	NA|252aa|up_5|NZ_CP023510.1_426392_427148_+	pfam04973, NMN_transporter, Nicotinamide mononucleotide transporter	csb3|355aa|up_4|NZ_CP023510.1_427300_428365_-	cd09764, Csb3_I-U, CRISPR/Cas system-associated RAMP superfamily protein Csb3	cas3|932aa|up_3|NZ_CP023510.1_428364_431160_-	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc	csb2gr5|530aa|up_2|NZ_CP023510.1_431152_432742_-	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system	cas7|411aa|up_1|NZ_CP023510.1_432743_433976_-	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053)	cas2|100aa|up_0|NZ_CP023510.1_435822_436122_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|352aa|down_0|NZ_CP023510.1_439140_440196_-	COG1485, COG1485, Predicted ATPase [General function prediction only]	NA|239aa|down_1|NZ_CP023510.1_440933_441650_+	PRK11855, PRK11855, dihydrolipoamide acetyltransferase; Reviewed	NA|397aa|down_2|NZ_CP023510.1_441664_442855_+	NA	NA|243aa|down_3|NZ_CP023510.1_443036_443765_+	NA	NA|337aa|down_4|NZ_CP023510.1_444401_445412_+	COG2855, COG2855, Predicted membrane protein [Function unknown]	NA|167aa|down_5|NZ_CP023510.1_445662_446163_+	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins	NA|159aa|down_6|NZ_CP023510.1_446250_446727_+	pfam01641, SelR, SelR domain	NA|422aa|down_7|NZ_CP023510.1_446927_448193_+	COG0349, Rnd, Ribonuclease D [Translation, ribosomal structure and biogenesis]	NA|177aa|down_8|NZ_CP023510.1_448405_448936_+	cd03467, Rieske, Rieske domain; a [2Fe-2S] cluster binding domain commonly found in Rieske non-heme iron oxygenase (RO) systems such as naphthalene and biphenyl dioxygenases, as well as in plant/cyanobacterial chloroplast b6f and mitochondrial cytochrome bc(1) complexes	NA|665aa|down_9|NZ_CP023510.1_449106_451101_-	PRK05444, PRK05444, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional
GCF_002386365.1_ASM238636v1	NZ_CP023510	Rothia mucilaginosa strain FDAARGOS_369 chromosome, complete genome	4	437714-438329	4,2	CRISPRCasFinder,PILER-CR	no	csb3,cas3,csb2gr5,cas7,cas2	csa3,RT,WYL,DEDDh,csb3,cas3,csb2gr5,cas7,cas2,DinG,c2c9_V-U4	Unclear	GCCTCAATGAAAGCCCTTCCCAGAAGGAAGGGAAAT,CCGAAAAGGAAGGGAAAT	36,18	0	0	NA	NA	NA:NA	8,4	8	Unclear	csa3,RT,WYL,DEDDh,csb3,cas3,csb2gr5,cas7,cas2,DinG,c2c9_V-U4	NA|290aa|up_9|NZ_CP023510.1_416940_417810_+,NA|360aa|up_6|NZ_CP023510.1_424823_425903_-,NA|397aa|down_2|NZ_CP023510.1_441664_442855_+,NA|243aa|down_3|NZ_CP023510.1_443036_443765_+	NA|290aa|up_9|NZ_CP023510.1_416940_417810_+	NA	NA|731aa|up_8|NZ_CP023510.1_418471_420664_-	cd05819, NHL, NHL repeat unit of beta-propeller proteins	NA|1030aa|up_7|NZ_CP023510.1_421242_424332_-	cd05819, NHL, NHL repeat unit of beta-propeller proteins	NA|360aa|up_6|NZ_CP023510.1_424823_425903_-	NA	NA|252aa|up_5|NZ_CP023510.1_426392_427148_+	pfam04973, NMN_transporter, Nicotinamide mononucleotide transporter	csb3|355aa|up_4|NZ_CP023510.1_427300_428365_-	cd09764, Csb3_I-U, CRISPR/Cas system-associated RAMP superfamily protein Csb3	cas3|932aa|up_3|NZ_CP023510.1_428364_431160_-	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc	csb2gr5|530aa|up_2|NZ_CP023510.1_431152_432742_-	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system	cas7|411aa|up_1|NZ_CP023510.1_432743_433976_-	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053)	cas2|100aa|up_0|NZ_CP023510.1_435822_436122_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|352aa|down_0|NZ_CP023510.1_439140_440196_-	COG1485, COG1485, Predicted ATPase [General function prediction only]	NA|239aa|down_1|NZ_CP023510.1_440933_441650_+	PRK11855, PRK11855, dihydrolipoamide acetyltransferase; Reviewed	NA|397aa|down_2|NZ_CP023510.1_441664_442855_+	NA	NA|243aa|down_3|NZ_CP023510.1_443036_443765_+	NA	NA|337aa|down_4|NZ_CP023510.1_444401_445412_+	COG2855, COG2855, Predicted membrane protein [Function unknown]	NA|167aa|down_5|NZ_CP023510.1_445662_446163_+	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins	NA|159aa|down_6|NZ_CP023510.1_446250_446727_+	pfam01641, SelR, SelR domain	NA|422aa|down_7|NZ_CP023510.1_446927_448193_+	COG0349, Rnd, Ribonuclease D [Translation, ribosomal structure and biogenesis]	NA|177aa|down_8|NZ_CP023510.1_448405_448936_+	cd03467, Rieske, Rieske domain; a [2Fe-2S] cluster binding domain commonly found in Rieske non-heme iron oxygenase (RO) systems such as naphthalene and biphenyl dioxygenases, as well as in plant/cyanobacterial chloroplast b6f and mitochondrial cytochrome bc(1) complexes	NA|665aa|down_9|NZ_CP023510.1_449106_451101_-	PRK05444, PRK05444, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional
GCF_002386365.1_ASM238636v1	NZ_CP023510	Rothia mucilaginosa strain FDAARGOS_369 chromosome, complete genome	5	438435-438764	5,3	CRISPRCasFinder,PILER-CR	no	csb3,cas3,csb2gr5,cas7,cas2	csa3,RT,WYL,DEDDh,csb3,cas3,csb2gr5,cas7,cas2,DinG,c2c9_V-U4	Unclear	GCCTCAATGAAAGCCCTTCCCAGAAGGAAGGGAAAT,CCCGCCGCCTCAATGAAAGCCCTTCCGAAAAGGAAGGGAAAT	36,42	0	0	NA	NA	NA:NA	4,2	4	Unclear	csa3,RT,WYL,DEDDh,csb3,cas3,csb2gr5,cas7,cas2,DinG,c2c9_V-U4	NA|290aa|up_9|NZ_CP023510.1_416940_417810_+,NA|360aa|up_6|NZ_CP023510.1_424823_425903_-,NA|397aa|down_2|NZ_CP023510.1_441664_442855_+,NA|243aa|down_3|NZ_CP023510.1_443036_443765_+	NA|290aa|up_9|NZ_CP023510.1_416940_417810_+	NA	NA|731aa|up_8|NZ_CP023510.1_418471_420664_-	cd05819, NHL, NHL repeat unit of beta-propeller proteins	NA|1030aa|up_7|NZ_CP023510.1_421242_424332_-	cd05819, NHL, NHL repeat unit of beta-propeller proteins	NA|360aa|up_6|NZ_CP023510.1_424823_425903_-	NA	NA|252aa|up_5|NZ_CP023510.1_426392_427148_+	pfam04973, NMN_transporter, Nicotinamide mononucleotide transporter	csb3|355aa|up_4|NZ_CP023510.1_427300_428365_-	cd09764, Csb3_I-U, CRISPR/Cas system-associated RAMP superfamily protein Csb3	cas3|932aa|up_3|NZ_CP023510.1_428364_431160_-	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc	csb2gr5|530aa|up_2|NZ_CP023510.1_431152_432742_-	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system	cas7|411aa|up_1|NZ_CP023510.1_432743_433976_-	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053)	cas2|100aa|up_0|NZ_CP023510.1_435822_436122_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|352aa|down_0|NZ_CP023510.1_439140_440196_-	COG1485, COG1485, Predicted ATPase [General function prediction only]	NA|239aa|down_1|NZ_CP023510.1_440933_441650_+	PRK11855, PRK11855, dihydrolipoamide acetyltransferase; Reviewed	NA|397aa|down_2|NZ_CP023510.1_441664_442855_+	NA	NA|243aa|down_3|NZ_CP023510.1_443036_443765_+	NA	NA|337aa|down_4|NZ_CP023510.1_444401_445412_+	COG2855, COG2855, Predicted membrane protein [Function unknown]	NA|167aa|down_5|NZ_CP023510.1_445662_446163_+	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins	NA|159aa|down_6|NZ_CP023510.1_446250_446727_+	pfam01641, SelR, SelR domain	NA|422aa|down_7|NZ_CP023510.1_446927_448193_+	COG0349, Rnd, Ribonuclease D [Translation, ribosomal structure and biogenesis]	NA|177aa|down_8|NZ_CP023510.1_448405_448936_+	cd03467, Rieske, Rieske domain; a [2Fe-2S] cluster binding domain commonly found in Rieske non-heme iron oxygenase (RO) systems such as naphthalene and biphenyl dioxygenases, as well as in plant/cyanobacterial chloroplast b6f and mitochondrial cytochrome bc(1) complexes	NA|665aa|down_9|NZ_CP023510.1_449106_451101_-	PRK05444, PRK05444, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional
GCF_002386365.1_ASM238636v1	NZ_CP023510	Rothia mucilaginosa strain FDAARGOS_369 chromosome, complete genome	6	558707-558783	6	CRISPRCasFinder	no		csa3,RT,WYL,DEDDh,csb3,cas3,csb2gr5,cas7,cas2,DinG,c2c9_V-U4	Orphan	GCGTCAGCGCCGCGGCGAAGCGTAA	25	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,WYL,DEDDh,csb3,cas3,csb2gr5,cas7,cas2,DinG,c2c9_V-U4	NA|615aa|up_3|NZ_CP023510.1_553343_555188_+,NA|86aa|up_1|NZ_CP023510.1_556338_556596_-,NA	NA|154aa|up_9|NZ_CP023510.1_538358_538820_-	TIGR01764, Probable_excisionase, DNA binding domain, excisionase family	NA|1516aa|up_8|NZ_CP023510.1_539105_543653_+	TIGR01967, ATP-dependent_RNA_helicase_HrpA, RNA helicase HrpA	NA|456aa|up_7|NZ_CP023510.1_544037_545405_-	pfam09985, Glucodextran_C, C-terminal binding-module, SLH-like, of glucodextranase	NA|332aa|up_6|NZ_CP023510.1_545682_546678_-	cd00085, HNHc, HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins	NA|1118aa|up_5|NZ_CP023510.1_548013_551367_-	PRK14109, PRK14109, bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase	NA|447aa|up_4|NZ_CP023510.1_551580_552921_-	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|615aa|up_3|NZ_CP023510.1_553343_555188_+	NA	NA|305aa|up_2|NZ_CP023510.1_555254_556169_+	PRK00311, panB, 3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed	NA|86aa|up_1|NZ_CP023510.1_556338_556596_-	NA	NA|304aa|up_0|NZ_CP023510.1_556855_557767_+	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|152aa|down_0|NZ_CP023510.1_558916_559372_-	PRK00464, nrdR, transcriptional repressor NrdR	NA|1181aa|down_1|NZ_CP023510.1_559547_563090_-	PRK05673, dnaE, DNA polymerase III subunit alpha; Validated	NA|329aa|down_2|NZ_CP023510.1_563181_564168_-	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|216aa|down_3|NZ_CP023510.1_564275_564923_-	PRK14772, PRK14772, lipoprotein signal peptidase; Provisional	NA|180aa|down_4|NZ_CP023510.1_565233_565773_-	pfam05103, DivIVA, DivIVA protein	NA|100aa|down_5|NZ_CP023510.1_566252_566552_-	pfam02325, YGGT, YGGT family	NA|294aa|down_6|NZ_CP023510.1_566562_567444_-	pfam04472, SepF, Cell division protein SepF	NA|278aa|down_7|NZ_CP023510.1_567681_568515_-	cd00635, PLPDE_III_YBL036c_like, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, YBL036c-like proteins	NA|283aa|down_8|NZ_CP023510.1_568564_569413_-	pfam02578, Cu-oxidase_4, Multi-copper polyphenol oxidoreductase laccase	NA|397aa|down_9|NZ_CP023510.1_569562_570753_-	PRK09330, PRK09330, cell division protein FtsZ; Validated
GCF_002386365.1_ASM238636v1	NZ_CP023510	Rothia mucilaginosa strain FDAARGOS_369 chromosome, complete genome	7	1297069-1297187	7	CRISPRCasFinder	no		csa3,RT,WYL,DEDDh,csb3,cas3,csb2gr5,cas7,cas2,DinG,c2c9_V-U4	Orphan	ACTGGTAACCAGAACCAGCAGCGTTCTACCGC	32	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,WYL,DEDDh,csb3,cas3,csb2gr5,cas7,cas2,DinG,c2c9_V-U4	NA,NA|54aa|down_1|NZ_CP023510.1_1298162_1298324_-,NA|478aa|down_6|NZ_CP023510.1_1301547_1302981_-,NA|183aa|down_7|NZ_CP023510.1_1303028_1303577_-	NA|451aa|up_9|NZ_CP023510.1_1279760_1281113_+	PRK14853, nhaA, pH-dependent sodium/proton antiporter; Provisional	NA|1117aa|up_8|NZ_CP023510.1_1281164_1284515_+	PRK02983, lysS, bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX	NA|521aa|up_7|NZ_CP023510.1_1284852_1286415_+	pfam01235, Na_Ala_symp, Sodium:alanine symporter family	NA|96aa|up_6|NZ_CP023510.1_1286598_1286886_+	pfam13396, PLDc_N, Phospholipase_D-nuclease N-terminal	NA|294aa|up_5|NZ_CP023510.1_1287343_1288225_+	pfam12401, DUF3662, Protein of unknown function (DUF2662)	NA|155aa|up_4|NZ_CP023510.1_1288224_1288689_+	COG1716, COG1716, FOG: FHA domain [Signal transduction mechanisms]	NA|588aa|up_3|NZ_CP023510.1_1288692_1290456_+	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms]	NA|487aa|up_2|NZ_CP023510.1_1290448_1291909_+	COG0772, FtsW, Bacterial cell division membrane protein [Cell division and chromosome partitioning]	NA|480aa|up_1|NZ_CP023510.1_1291901_1293341_+	TIGR03423, pbp2_mrdA, penicillin-binding protein 2	NA|586aa|up_0|NZ_CP023510.1_1293337_1295095_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|211aa|down_0|NZ_CP023510.1_1297514_1298147_-	PRK07765, PRK07765, aminodeoxychorismate/anthranilate synthase component II	NA|54aa|down_1|NZ_CP023510.1_1298162_1298324_-	NA	NA|250aa|down_2|NZ_CP023510.1_1298343_1299093_-	cd05830, Sortase_E, Sortase domain found in the class E family of sortases	NA|105aa|down_3|NZ_CP023510.1_1299252_1299567_+	pfam06781, CrgA, Cell division protein CrgA	NA|306aa|down_4|NZ_CP023510.1_1299766_1300684_-	PRK03635, PRK03635, ArgP/LysG family DNA-binding transcriptional regulator	NA|211aa|down_5|NZ_CP023510.1_1300892_1301525_+	COG1279, COG1279, Lysine efflux permease [General function prediction only]	NA|478aa|down_6|NZ_CP023510.1_1301547_1302981_-	NA	NA|183aa|down_7|NZ_CP023510.1_1303028_1303577_-	NA	NA|452aa|down_8|NZ_CP023510.1_1309618_1310974_-	TIGR00665, DnaB, replicative DNA helicase	NA|398aa|down_9|NZ_CP023510.1_1311079_1312273_-	cd03784, GT1_Gtf-like, UDP-glycosyltransferases and similar proteins
GCF_002386365.1_ASM238636v1	NZ_CP023510	Rothia mucilaginosa strain FDAARGOS_369 chromosome, complete genome	8	1355720-1355836	8	CRISPRCasFinder	no		csa3,RT,WYL,DEDDh,csb3,cas3,csb2gr5,cas7,cas2,DinG,c2c9_V-U4	Orphan	TGTGGCTGTGGCTCGGGTGGCTGCGGT	27	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,WYL,DEDDh,csb3,cas3,csb2gr5,cas7,cas2,DinG,c2c9_V-U4	NA|412aa|up_9|NZ_CP023510.1_1345218_1346454_+,NA|112aa|up_8|NZ_CP023510.1_1346989_1347325_-,NA|55aa|up_2|NZ_CP023510.1_1351909_1352074_-,NA|116aa|down_2|NZ_CP023510.1_1358757_1359105_+	NA|412aa|up_9|NZ_CP023510.1_1345218_1346454_+	NA	NA|112aa|up_8|NZ_CP023510.1_1346989_1347325_-	NA	NA|186aa|up_7|NZ_CP023510.1_1347468_1348026_+	COG0652, PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones]	NA|275aa|up_6|NZ_CP023510.1_1348190_1349015_+	pfam01694, Rhomboid, Rhomboid family	NA|274aa|up_5|NZ_CP023510.1_1349072_1349894_+	pfam01694, Rhomboid, Rhomboid family	NA|273aa|up_4|NZ_CP023510.1_1350230_1351049_-	PRK12550, PRK12550, shikimate 5-dehydrogenase; Reviewed	NA|107aa|up_3|NZ_CP023510.1_1351050_1351371_-	TIGR02200, conserved_hypothetical_protein, Glutaredoxin-like protein	NA|55aa|up_2|NZ_CP023510.1_1351909_1352074_-	NA	NA|466aa|up_1|NZ_CP023510.1_1352522_1353920_-	COG0153, GalK, Galactokinase [Carbohydrate transport and metabolism]	NA|201aa|up_0|NZ_CP023510.1_1354179_1354782_-	PRK13756, PRK13756, TetR family transcriptional regulator	NA|581aa|down_0|NZ_CP023510.1_1356277_1358020_+	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism]	NA|176aa|down_1|NZ_CP023510.1_1358218_1358746_+	PRK05035, PRK05035, electron transport complex protein RnfC; Provisional	NA|116aa|down_2|NZ_CP023510.1_1358757_1359105_+	NA	NA|175aa|down_3|NZ_CP023510.1_1359279_1359804_-	cd13961, PT_UbiA_DGGGPS, Geranylgeranylglycerol-phosphate geranylgeranyltransferase	NA|258aa|down_4|NZ_CP023510.1_1359939_1360713_-	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|285aa|down_5|NZ_CP023510.1_1360885_1361740_-	PRK11103, PRK11103, PTS mannose transporter subunit IID	NA|289aa|down_6|NZ_CP023510.1_1361751_1362618_-	PRK15065, PRK15065, mannose/fructose/sorbose family PTS transporter subunit IIC	NA|327aa|down_7|NZ_CP023510.1_1362614_1363595_-	PRK15088, PRK15088, PTS system mannose-specific transporter subunits IIAB; Provisional	NA|290aa|down_8|NZ_CP023510.1_1364283_1365153_-	PRK09772, PRK09772, transcriptional antiterminator BglG; Provisional	NA|248aa|down_9|NZ_CP023510.1_1365402_1366146_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]
GCF_002386365.1_ASM238636v1	NZ_CP023510	Rothia mucilaginosa strain FDAARGOS_369 chromosome, complete genome	9	1466209-1466542	4,9,3	PILER-CR,CRISPRCasFinder,CRT	no	c2c9_V-U4	csa3,RT,WYL,DEDDh,csb3,cas3,csb2gr5,cas7,cas2,DinG,c2c9_V-U4	Type V-U4	GTTTTCCCCGTATGCGCGGGGATGAGCCC,GTTTTCCCCGTATGCGCGGGGATGAGCCC,GTATGCGCGGGGATGAGCCC	29,29,20	0	0	NA	NA	I-C,I-E,II-B:I-C,I-E,II-B:NA	5,5,5	5	TypeV-U4	csa3,RT,WYL,DEDDh,csb3,cas3,csb2gr5,cas7,cas2,DinG,c2c9_V-U4	NA|70aa|up_8|NZ_CP023510.1_1460598_1460808_-,NA|56aa|up_7|NZ_CP023510.1_1461405_1461573_+,NA|87aa|up_6|NZ_CP023510.1_1461594_1461855_+,NA|63aa|up_5|NZ_CP023510.1_1461857_1462046_+,NA|94aa|down_4|NZ_CP023510.1_1473537_1473819_+,NA|482aa|down_6|NZ_CP023510.1_1474672_1476118_+,NA|105aa|down_7|NZ_CP023510.1_1476098_1476413_+	NA|216aa|up_9|NZ_CP023510.1_1459951_1460599_-	COG2184, Fic, Protein involved in cell division [Cell division and chromosome partitioning]	NA|70aa|up_8|NZ_CP023510.1_1460598_1460808_-	NA	NA|56aa|up_7|NZ_CP023510.1_1461405_1461573_+	NA	NA|87aa|up_6|NZ_CP023510.1_1461594_1461855_+	NA	NA|63aa|up_5|NZ_CP023510.1_1461857_1462046_+	NA	NA|187aa|up_4|NZ_CP023510.1_1462074_1462635_+	COG4185, COG4185, Uncharacterized protein conserved in bacteria [Function unknown]	NA|90aa|up_3|NZ_CP023510.1_1462702_1462972_+	pfam18495, VbhA, Antitoxin VbhA	NA|212aa|up_2|NZ_CP023510.1_1462974_1463610_+	COG2184, Fic, Protein involved in cell division [Cell division and chromosome partitioning]	NA|93aa|up_1|NZ_CP023510.1_1463674_1463953_+	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system	c2c9_V-U4|561aa|up_0|NZ_CP023510.1_1464430_1466113_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|379aa|down_0|NZ_CP023510.1_1466776_1467913_+	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed	NA|539aa|down_1|NZ_CP023510.1_1468204_1469821_+	cd07325, M48_Ste24p_like, M48 Ste24 endopeptidase-like, integral membrane metallopeptidase	NA|330aa|down_2|NZ_CP023510.1_1470009_1470999_+	pfam13593, SBF_like, SBF-like CPA transporter family (DUF4137)	NA|449aa|down_3|NZ_CP023510.1_1471588_1472935_+	pfam12708, Pectate_lyase_3, Pectate lyase superfamily protein	NA|94aa|down_4|NZ_CP023510.1_1473537_1473819_+	NA	NA|243aa|down_5|NZ_CP023510.1_1473947_1474676_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|482aa|down_6|NZ_CP023510.1_1474672_1476118_+	NA	NA|105aa|down_7|NZ_CP023510.1_1476098_1476413_+	NA	NA|443aa|down_8|NZ_CP023510.1_1477335_1478664_+	pfam12708, Pectate_lyase_3, Pectate lyase superfamily protein	NA|270aa|down_9|NZ_CP023510.1_1479153_1479963_+	pfam00395, SLH, S-layer homology domain
GCF_002386365.1_ASM238636v1	NZ_CP023510	Rothia mucilaginosa strain FDAARGOS_369 chromosome, complete genome	10	1616602-1616703	10	CRISPRCasFinder	no		csa3,RT,WYL,DEDDh,csb3,cas3,csb2gr5,cas7,cas2,DinG,c2c9_V-U4	Orphan	GCACCCCAGGCTCAGGCACAGCAG	24	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,WYL,DEDDh,csb3,cas3,csb2gr5,cas7,cas2,DinG,c2c9_V-U4	NA|91aa|up_2|NZ_CP023510.1_1613443_1613716_-,NA|309aa|down_4|NZ_CP023510.1_1624497_1625424_+	NA|256aa|up_9|NZ_CP023510.1_1605559_1606327_+	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	NA|368aa|up_8|NZ_CP023510.1_1606390_1607494_+	COG1169, MenF, Isochorismate synthase [Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|340aa|up_7|NZ_CP023510.1_1607606_1608626_-	COG2091, Sfp, Phosphopantetheinyl transferase [Coenzyme metabolism]	NA|475aa|up_6|NZ_CP023510.1_1608800_1610225_+	cd09278, RNase_HI_prokaryote_like, RNase HI family found mainly in prokaryotes	NA|97aa|up_5|NZ_CP023510.1_1610457_1610748_-	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target	NA|500aa|up_4|NZ_CP023510.1_1611163_1612663_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|235aa|up_3|NZ_CP023510.1_1612664_1613369_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|91aa|up_2|NZ_CP023510.1_1613443_1613716_-	NA	NA|259aa|up_1|NZ_CP023510.1_1613857_1614634_+	pfam11228, DUF3027, Protein of unknown function (DUF3027)	NA|235aa|up_0|NZ_CP023510.1_1614857_1615562_+	COG1321, TroR, Mn-dependent transcriptional regulator [Transcription]	NA|343aa|down_0|NZ_CP023510.1_1617317_1618346_-	COG4339, COG4339, Uncharacterized protein conserved in bacteria [Function unknown]	NA|991aa|down_1|NZ_CP023510.1_1618714_1621687_+	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA	NA|389aa|down_2|NZ_CP023510.1_1622149_1623316_+	PRK00696, sucC, ADP-forming succinate--CoA ligase subunit beta	NA|306aa|down_3|NZ_CP023510.1_1623345_1624263_+	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated	NA|309aa|down_4|NZ_CP023510.1_1624497_1625424_+	NA	NA|171aa|down_5|NZ_CP023510.1_1625554_1626067_+	pfam13518, HTH_28, Helix-turn-helix domain	NA|304aa|down_6|NZ_CP023510.1_1626015_1626927_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|405aa|down_7|NZ_CP023510.1_1627067_1628282_-	cd02433, Nodulin-21_like_2, Nodulin-21 and CCC1-related protein family	NA|166aa|down_8|NZ_CP023510.1_1628656_1629154_-	cd01043, DPS, DPS protein, ferritin-like diiron-binding domain	NA|219aa|down_9|NZ_CP023510.1_1629448_1630105_-	COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only]
