assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002393225.1_ASM239322v1	NZ_CP023168	Bacillus paralicheniformis strain 14DA11 chromosome, complete genome	1	937618-942416	1	CRT	no	csa3	csa3,WYL,DinG,cas3,DEDDh	Type I-A	ACNGGTCCAACNGGAGCNAC	20	1	1	941247-941289	NZ_CP023168.1_936006-936048	NA	61	61	Orphan	csa3,WYL,DinG,cas3,DEDDh	NA,NA	NA|217aa|up_9|NZ_CP023168.1_924123_924774_+	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown]	NA|44aa|up_8|NZ_CP023168.1_924814_924946_-	pfam11121, DUF2639, Protein of unknown function (DUF2639)	NA|251aa|up_7|NZ_CP023168.1_925315_926068_-	PRK12896, PRK12896, methionine aminopeptidase; Reviewed	NA|654aa|up_6|NZ_CP023168.1_926193_928155_-	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane]	NA|126aa|up_5|NZ_CP023168.1_928417_928795_+	pfam09350, DUF1992, Domain of unknown function (DUF1992)	NA|471aa|up_4|NZ_CP023168.1_930465_931878_+	TIGR01992, phosphotransferase_system_trehalose_permease, PTS system, trehalose-specific IIBC component	NA|563aa|up_3|NZ_CP023168.1_931950_933639_+	TIGR02403, Trehalose-6-phosphate_hydrolase, alpha,alpha-phosphotrehalase	NA|239aa|up_2|NZ_CP023168.1_933660_934377_+	TIGR02404, Trehalose_operon_transcriptional_repressor, trehalose operon repressor, B	NA|231aa|up_1|NZ_CP023168.1_934482_935175_+	cd03358, LbH_WxcM_N_like, WcxM-like, Left-handed parallel beta-Helix (LbH) N-terminal domain: This group is composed of Xanthomonas campestris WcxM and proteins with similarity to the WcxM N-terminal domain	NA|535aa|up_0|NZ_CP023168.1_935301_936906_+	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|364aa|down_0|NZ_CP023168.1_945362_946454_-	cd00616, AHBA_syn, 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)	NA|181aa|down_1|NZ_CP023168.1_946450_946993_-	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates	NA|325aa|down_2|NZ_CP023168.1_947010_947985_-	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs	NA|458aa|down_3|NZ_CP023168.1_948051_949425_-	COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane]	NA|748aa|down_4|NZ_CP023168.1_949578_951822_-	cd06433, GT_2_WfgS_like, WfgS and WfeV are involved in O-antigen biosynthesis	NA|361aa|down_5|NZ_CP023168.1_952015_953098_+	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide	NA|370aa|down_6|NZ_CP023168.1_953219_954329_+	cd00616, AHBA_syn, 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)	NA|355aa|down_7|NZ_CP023168.1_954325_955390_+	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|432aa|down_8|NZ_CP023168.1_955475_956771_+	TIGR03026, NDP-sugDHase, nucleotide sugar dehydrogenase	NA|304aa|down_9|NZ_CP023168.1_956851_957763_+	COG1073, COG1073, Hydrolases of the alpha/beta superfamily [General function prediction only]
GCF_002393225.1_ASM239322v1	NZ_CP023168	Bacillus paralicheniformis strain 14DA11 chromosome, complete genome	2	943606-945145	2	CRT	no		csa3,WYL,DinG,cas3,DEDDh	Orphan	CAACNGGNNCNACNGGNGC	19	1	1	944885-944910	NZ_CP023168.1_935868-935893	NA	18	18	Orphan	csa3,WYL,DinG,cas3,DEDDh	NA|1905aa|up_0|NZ_CP023168.1_937131_942846_+,NA	NA|44aa|up_9|NZ_CP023168.1_924814_924946_-	pfam11121, DUF2639, Protein of unknown function (DUF2639)	NA|251aa|up_8|NZ_CP023168.1_925315_926068_-	PRK12896, PRK12896, methionine aminopeptidase; Reviewed	NA|654aa|up_7|NZ_CP023168.1_926193_928155_-	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane]	NA|126aa|up_6|NZ_CP023168.1_928417_928795_+	pfam09350, DUF1992, Domain of unknown function (DUF1992)	NA|471aa|up_5|NZ_CP023168.1_930465_931878_+	TIGR01992, phosphotransferase_system_trehalose_permease, PTS system, trehalose-specific IIBC component	NA|563aa|up_4|NZ_CP023168.1_931950_933639_+	TIGR02403, Trehalose-6-phosphate_hydrolase, alpha,alpha-phosphotrehalase	NA|239aa|up_3|NZ_CP023168.1_933660_934377_+	TIGR02404, Trehalose_operon_transcriptional_repressor, trehalose operon repressor, B	NA|231aa|up_2|NZ_CP023168.1_934482_935175_+	cd03358, LbH_WxcM_N_like, WcxM-like, Left-handed parallel beta-Helix (LbH) N-terminal domain: This group is composed of Xanthomonas campestris WcxM and proteins with similarity to the WcxM N-terminal domain	NA|535aa|up_1|NZ_CP023168.1_935301_936906_+	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|1905aa|up_0|NZ_CP023168.1_937131_942846_+	NA	NA|364aa|down_0|NZ_CP023168.1_945362_946454_-	cd00616, AHBA_syn, 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)	NA|181aa|down_1|NZ_CP023168.1_946450_946993_-	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates	NA|325aa|down_2|NZ_CP023168.1_947010_947985_-	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs	NA|458aa|down_3|NZ_CP023168.1_948051_949425_-	COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane]	NA|748aa|down_4|NZ_CP023168.1_949578_951822_-	cd06433, GT_2_WfgS_like, WfgS and WfeV are involved in O-antigen biosynthesis	NA|361aa|down_5|NZ_CP023168.1_952015_953098_+	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide	NA|370aa|down_6|NZ_CP023168.1_953219_954329_+	cd00616, AHBA_syn, 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)	NA|355aa|down_7|NZ_CP023168.1_954325_955390_+	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|432aa|down_8|NZ_CP023168.1_955475_956771_+	TIGR03026, NDP-sugDHase, nucleotide sugar dehydrogenase	NA|304aa|down_9|NZ_CP023168.1_956851_957763_+	COG1073, COG1073, Hydrolases of the alpha/beta superfamily [General function prediction only]
GCF_002393225.1_ASM239322v1	NZ_CP023168	Bacillus paralicheniformis strain 14DA11 chromosome, complete genome	3	2073559-2073657	1	CRISPRCasFinder	no	csa3,WYL	csa3,WYL,DinG,cas3,DEDDh	Type I-A	AACGCTAAAAGAATCGCTGTCTGA	24	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,DinG,cas3,DEDDh	NA|174aa|up_7|NZ_CP023168.1_2063070_2063592_+,NA|327aa|up_1|NZ_CP023168.1_2070134_2071115_+,NA|170aa|down_7|NZ_CP023168.1_2079826_2080336_-	NA|119aa|up_9|NZ_CP023168.1_2061629_2061986_+	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown]	NA|76aa|up_8|NZ_CP023168.1_2062429_2062657_-	pfam14070, YjfB_motility, Putative motility protein	NA|174aa|up_7|NZ_CP023168.1_2063070_2063592_+	NA	NA|594aa|up_6|NZ_CP023168.1_2063775_2065557_+	COG0514, RecQ, Superfamily II DNA helicase [DNA replication, recombination, and repair]	NA|270aa|up_5|NZ_CP023168.1_2065793_2066603_+	COG3584, COG3584, Uncharacterized protein conserved in bacteria [Function unknown]	NA|530aa|up_4|NZ_CP023168.1_2066763_2068353_+	PRK10484, PRK10484, putative transporter; Provisional	NA|322aa|up_3|NZ_CP023168.1_2068384_2069350_-	cd07062, Peptidase_S66_mccF_like, Microcin C7 self-immunity protein determines resistance to exogenous microcin C7	NA|170aa|up_2|NZ_CP023168.1_2069394_2069904_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|327aa|up_1|NZ_CP023168.1_2070134_2071115_+	NA	NA|178aa|up_0|NZ_CP023168.1_2071267_2071801_+	COG2322, COG2322, Predicted membrane protein [Function unknown]	NA|216aa|down_0|NZ_CP023168.1_2074114_2074762_+	pfam08795, DUF1796, Putative papain-like cysteine peptidase (DUF1796)	NA|329aa|down_1|NZ_CP023168.1_2074800_2075787_+	pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein	NA|233aa|down_2|NZ_CP023168.1_2075920_2076619_-	cd16891, CwlT-like, CwlT-like N-terminal lysozyme domain and similar domains	NA|446aa|down_3|NZ_CP023168.1_2076661_2077999_-	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|135aa|down_4|NZ_CP023168.1_2077998_2078403_+	pfam17452, YnfE, Uncharacterized protein YnfE	NA|275aa|down_5|NZ_CP023168.1_2078543_2079368_+	cd07727, YmaE-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis YmaE and related proteins; MBL-fold metallo hydrolase domain	csa3|111aa|down_6|NZ_CP023168.1_2079453_2079786_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|170aa|down_7|NZ_CP023168.1_2079826_2080336_-	NA	WYL|312aa|down_8|NZ_CP023168.1_2080513_2081449_+	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	NA|95aa|down_9|NZ_CP023168.1_2081502_2081787_+	pfam12674, Zn_ribbon_2, Putative zinc ribbon domain
GCF_002393225.1_ASM239322v1	NZ_CP023168	Bacillus paralicheniformis strain 14DA11 chromosome, complete genome	4	2521434-2521649	2	CRISPRCasFinder	no	DinG,cas3	csa3,WYL,DinG,cas3,DEDDh	Unclear	AAGCCTTGCAAGAAGGACTACGATTATTGCAAAAAGGATTATTACTACCATGAG	54	0	0	NA	NA	NA	1	1	Unclear	csa3,WYL,DinG,cas3,DEDDh	NA|121aa|up_0|NZ_CP023168.1_2520499_2520862_-,NA	NA|1188aa|up_9|NZ_CP023168.1_2508085_2511649_-	cd09912, DLP_2, Dynamin-like protein including dynamins, mitofusins, and guanylate-binding proteins	NA|32aa|up_8|NZ_CP023168.1_2511792_2511888_-	NF033217, Fur_reg_FbpC, Fur-regulated basic protein FbpC	NA|168aa|up_7|NZ_CP023168.1_2511951_2512455_-	COG1755, COG1755, Uncharacterized protein conserved in bacteria [Function unknown]	NA|366aa|up_6|NZ_CP023168.1_2512462_2513560_-	COG3424, BcsA, Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|184aa|up_5|NZ_CP023168.1_2513601_2514153_-	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|439aa|up_4|NZ_CP023168.1_2514225_2515542_-	TIGR03173, pbuX, xanthine permease	NA|195aa|up_3|NZ_CP023168.1_2515538_2516123_-	PRK09219, PRK09219, xanthine phosphoribosyltransferase; Validated	NA|502aa|up_2|NZ_CP023168.1_2516480_2517986_-	cd06460, M32_Taq, Peptidase family M32, which includes thermostable carboxypeptidases TaqCP, PfuCP and FisCP	DinG|640aa|up_1|NZ_CP023168.1_2518098_2520018_-	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair]	NA|121aa|up_0|NZ_CP023168.1_2520499_2520862_-	NA	NA|384aa|down_0|NZ_CP023168.1_2521975_2523127_-	COG0116, COG0116, Predicted N6-adenine-specific DNA methylase [DNA replication, recombination, and repair]	NA|99aa|down_1|NZ_CP023168.1_2523661_2523958_-	PRK14127, PRK14127, cell division regulator GpsB	NA|184aa|down_2|NZ_CP023168.1_2524038_2524590_-	PRK13660, PRK13660, hypothetical protein; Provisional	NA|90aa|down_3|NZ_CP023168.1_2524706_2524976_-	pfam11122, Spore-coat_CotD, Inner spore coat protein D	NA|438aa|down_4|NZ_CP023168.1_2525217_2526531_-	COG3359, COG3359, Predicted exonuclease [DNA replication, recombination, and repair]	cas3|760aa|down_5|NZ_CP023168.1_2526536_2528816_-	COG1205, COG1205, Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster [General function prediction only]	NA|169aa|down_6|NZ_CP023168.1_2528912_2529419_-	pfam00358, PTS_EIIA_1, phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1	NA|140aa|down_7|NZ_CP023168.1_2529591_2530011_+	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]	NA|149aa|down_8|NZ_CP023168.1_2530029_2530476_-	pfam14179, YppG, YppG-like protein	NA|67aa|down_9|NZ_CP023168.1_2530654_2530855_+	pfam14178, YppF, YppF-like protein
GCF_002393225.1_ASM239322v1	NZ_CP023168	Bacillus paralicheniformis strain 14DA11 chromosome, complete genome	5	3185007-3185315	3	CRT	no	csa3	csa3,WYL,DinG,cas3,DEDDh	Type I-A	TATTCTTCCGGCTTTGCTTCT	21	4	4	3185148-3185168|3185190-3185210|3185232-3185252|3185274-3185294	NZ_CP023168.1_3185316-3185336|NZ_CP023168.1_3185316-3185336|NZ_CP023168.1_3185316-3185336|NZ_CP023168.1_3185316-3185336	NA	7	7	Orphan	csa3,WYL,DinG,cas3,DEDDh	NA|64aa|up_1|NZ_CP023168.1_3183214_3183406_+,NA|162aa|down_6|NZ_CP023168.1_3192701_3193187_+	NA|173aa|up_9|NZ_CP023168.1_3172586_3173105_-	COG2891, MreD, Cell shape-determining protein [Cell envelope biogenesis, outer membrane]	NA|303aa|up_8|NZ_CP023168.1_3173101_3174010_-	PRK13922, PRK13922, rod shape-determining protein MreC; Provisional	NA|337aa|up_7|NZ_CP023168.1_3174040_3175051_-	PRK13927, PRK13927, rod shape-determining protein MreB; Provisional	NA|225aa|up_6|NZ_CP023168.1_3175138_3175813_-	PRK00024, PRK00024, DNA repair protein RadC	NA|191aa|up_5|NZ_CP023168.1_3175867_3176440_-	PRK00148, PRK00148, Maf-like protein; Reviewed	NA|345aa|up_4|NZ_CP023168.1_3176590_3177625_-	pfam05036, SPOR, Sporulation related domain	NA|435aa|up_3|NZ_CP023168.1_3178731_3180036_-	COG0285, FolC, Folylpolyglutamate synthase [Coenzyme metabolism]	NA|881aa|up_2|NZ_CP023168.1_3180112_3182755_-	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|64aa|up_1|NZ_CP023168.1_3183214_3183406_+	NA	NA|341aa|up_0|NZ_CP023168.1_3183424_3184447_-	TIGR02904, hypothetical_conserved_protein, spore coat protein YsxE	NA|432aa|down_0|NZ_CP023168.1_3186254_3187550_-	PRK00062, PRK00062, glutamate-1-semialdehyde 2,1-aminomutase	NA|325aa|down_1|NZ_CP023168.1_3187575_3188550_-	PRK09283, PRK09283, porphobilinogen synthase	NA|264aa|down_2|NZ_CP023168.1_3188553_3189345_-	cd06578, HemD, Uroporphyrinogen-III synthase (HemD) catalyzes the asymmetrical cyclization of tetrapyrrole (linear) to uroporphyrinogen-III, the fourth step in the biosynthesis of heme	NA|314aa|down_3|NZ_CP023168.1_3189334_3190276_-	PRK00072, hemC, porphobilinogen deaminase; Reviewed	NA|277aa|down_4|NZ_CP023168.1_3190315_3191146_-	pfam01578, Cytochrom_C_asm, Cytochrome C assembly protein	NA|454aa|down_5|NZ_CP023168.1_3191151_3192513_-	PRK00045, hemA, glutamyl-tRNA reductase; Reviewed	NA|162aa|down_6|NZ_CP023168.1_3192701_3193187_+	NA	NA|196aa|down_7|NZ_CP023168.1_3193234_3193822_-	PRK00454, engB, GTP-binding protein YsxC; Reviewed	NA|775aa|down_8|NZ_CP023168.1_3193818_3196143_-	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones]	NA|552aa|down_9|NZ_CP023168.1_3196359_3198015_-	TIGR02902, Lon_protease_2, ATP-dependent protease LonB
