The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP023525	Cedecea neteri strain FDAARGOS_392 chromosome, complete genome	5214802	955766	974804	5214802	tail,lysis,plate	uncultured_Caudovirales_phage(32.0%)	30	NA	NA
WP_008459505.1|955766_956447_+	ribonuclease III	NA	A0A0P0YM82	Yellowstone_lake_phycodnavirus	29.7	4.3e-21
WP_008459503.1|956443_957352_+	GTPase Era	NA	NA	NA	NA	NA
WP_061278006.1|957356_958094_+	DNA repair protein RecO	NA	NA	NA	NA	NA
WP_061278007.1|958168_958900_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_008459499.1|958899_959280_+	holo-ACP synthase	NA	NA	NA	NA	NA
WP_039297344.1|959276_959537_-	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	50.0	4.2e-17
WP_061278008.1|959799_960546_+	helix-turn-helix transcriptional regulator	NA	A0A2I6PIE7	Escherichia_phage	46.7	1.5e-46
WP_061278009.1|960912_961248_+	antitermination protein	NA	Q716D8	Shigella_phage	50.0	7.1e-17
WP_061278010.1|961300_961600_+	hypothetical protein	NA	O64361	Escherichia_phage	48.0	5.1e-19
WP_061278011.1|961599_962091_+	lysozyme	NA	A0A2H4JCH1	uncultured_Caudovirales_phage	52.2	5.6e-39
WP_061278012.1|962087_962546_+|lysis	lysis protein	lysis	Q2A0C4	Sodalis_phage	46.1	7.6e-22
WP_061278013.1|962596_963475_+	triacylglycerol lipase	NA	NA	NA	NA	NA
WP_061278014.1|963520_964060_+	hypothetical protein	NA	A0A2H4J1A0	uncultured_Caudovirales_phage	41.3	6.4e-36
WP_061278015.1|964063_965203_+	DUF3383 domain-containing protein	NA	A0A2H4J8G4	uncultured_Caudovirales_phage	62.3	2.8e-129
WP_061278016.1|965213_965654_+	DUF3277 family protein	NA	A0A0M5M1K6	Salmonella_phage	63.0	3.6e-45
WP_061278017.1|965657_966071_+	hypothetical protein	NA	A0A2H4J2V6	uncultured_Caudovirales_phage	58.2	1.4e-38
WP_082763254.1|966082_966259_+	lytic transglycosylase	NA	A0A2H4J1A2	uncultured_Caudovirales_phage	50.0	2.6e-07
WP_061278019.1|966248_967001_+	hypothetical protein	NA	A0A0M4REK7	Salmonella_phage	33.8	1.4e-25
WP_138089244.1|967016_967652_+	hypothetical protein	NA	A0A0M4REK7	Salmonella_phage	28.4	1.6e-06
WP_061278021.1|967651_968230_+	hypothetical protein	NA	A0A0M3ULD5	Salmonella_phage	44.9	1.2e-32
WP_061278022.1|968239_968548_+	hypothetical protein	NA	A0A0M4R5B7	Salmonella_phage	57.0	5.0e-25
WP_061278023.1|968558_969566_+	hypothetical protein	NA	A0A2H4J1B2	uncultured_Caudovirales_phage	39.7	4.4e-70
WP_061278024.1|969602_970286_+	hypothetical protein	NA	A0A0M5M1K7	Salmonella_phage	54.2	1.1e-59
WP_061278025.1|970282_970633_+	hypothetical protein	NA	A0A2H4J629	uncultured_Caudovirales_phage	56.4	9.9e-30
WP_061278026.1|970633_971833_+|plate	baseplate J/gp47 family protein	plate	A0A0M4RD32	Salmonella_phage	71.9	2.4e-155
WP_061278027.1|971829_972510_+	DUF2612 domain-containing protein	NA	A0A2H4J1A9	uncultured_Caudovirales_phage	75.2	9.7e-98
WP_096753958.1|972509_973226_+	hypothetical protein	NA	A0A0M3ULD8	Salmonella_phage	47.9	1.3e-28
WP_061279215.1|973228_973657_+|tail	tail fiber assembly protein	tail	M1SNQ2	Escherichia_phage	50.4	1.4e-33
WP_096753959.1|973836_974217_-	hypothetical protein	NA	I3PGW0	Xanthomonas_phage	31.6	3.4e-07
WP_061277201.1|974246_974804_+	recombinase family protein	NA	A0A0F7LA37	Escherichia_phage	84.2	3.5e-85
>prophage 2
NZ_CP023525	Cedecea neteri strain FDAARGOS_392 chromosome, complete genome	5214802	2078820	2112749	5214802	capsid,tail,head,transposase,plate,terminase,integrase	Haemophilus_phage(26.09%)	49	2072202:2072218	2089357:2089373
2072202:2072218	attL	GCTTAACCGCCTGCGCG	NA	NA	NA	NA
WP_096753978.1|2078820_2080884_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	A0A2D1GNK9	Pseudomonas_phage	49.4	5.1e-182
WP_061279176.1|2080893_2081811_+	AAA family ATPase	NA	A0A2D1GNS0	Pseudomonas_phage	50.5	2.2e-76
WP_096753980.1|2082152_2082389_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096753981.1|2082379_2082607_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096753982.1|2082624_2082834_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096753983.1|2082823_2083450_+	DUF3164 family protein	NA	A0A2D1GNM4	Pseudomonas_phage	62.9	2.7e-70
WP_096753984.1|2083451_2083682_+	ANR family transcriptional regulator	NA	NA	NA	NA	NA
WP_096753985.1|2083662_2083857_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096753986.1|2083957_2084335_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096753987.1|2084331_2085027_+	hypothetical protein	NA	A0A1W6JP46	Morganella_phage	33.5	4.6e-26
WP_138089259.1|2085088_2085310_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138089260.1|2085364_2085586_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061279207.1|2085823_2086054_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061279204.1|2086056_2086365_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138089261.1|2086366_2086774_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138089262.1|2086890_2087388_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096753991.1|2087502_2087808_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096754186.1|2088152_2088548_+	regulatory protein GemA	NA	A0A0A7DJY7	Pseudomonas_phage	45.2	5.0e-22
WP_096753992.1|2088549_2089002_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096753993.1|2089087_2089477_+	M15 family metallopeptidase	NA	A0A0A7NQ86	Enterobacteria_phage	67.7	1.1e-42
2089357:2089373	attR	CGCGCAGGCGGTTAAGC	NA	NA	NA	NA
WP_096753994.1|2089473_2089725_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138089263.1|2089714_2090191_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085543076.1|2090384_2090654_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061279229.1|2091163_2091412_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061279230.1|2091401_2091596_+	hypothetical protein	NA	NA	NA	NA	NA
WP_156479849.1|2091582_2091732_-	hypothetical protein	NA	NA	NA	NA	NA
WP_096753995.1|2091880_2093554_+|terminase	phage terminase large subunit	terminase	B7SDN0	Haemophilus_phage	52.8	7.3e-155
WP_096753996.1|2093556_2095134_+	DUF935 domain-containing protein	NA	A0A0M5MS00	Ralstonia_phage	41.6	3.6e-103
WP_096753997.1|2095120_2096386_+|capsid	minor capsid protein	capsid	A0A0M4UTA3	Ralstonia_phage	40.9	1.3e-63
WP_096753998.1|2096388_2096871_+	phage virion morphogenesis protein	NA	NA	NA	NA	NA
WP_061279000.1|2098217_2098625_+	hypothetical protein	NA	A0A2H4IZH5	uncultured_Caudovirales_phage	43.0	4.5e-26
WP_061279001.1|2098636_2099560_+|head	Mu-like prophage major head subunit gpT family protein	head	A0A2H4J778	uncultured_Caudovirales_phage	56.7	1.6e-95
WP_061279002.1|2099564_2100005_+	DUF1320 domain-containing protein	NA	A0A1X9SGZ3	Bradyrhizobium_phage	38.2	3.3e-14
WP_061279003.1|2100004_2100682_+	DUF1834 family protein	NA	NA	NA	NA	NA
WP_061279004.1|2100693_2100987_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061279005.1|2100990_2102430_+|tail	phage tail sheath subtilisin-like domain-containing protein	tail	B7SDP8	Haemophilus_phage	40.2	4.2e-82
WP_061279007.1|2102441_2102813_+	hypothetical protein	NA	F6MIK8	Haemophilus_phage	46.0	3.6e-22
WP_061279009.1|2102815_2103199_+|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_096753999.1|2103339_2105226_+|tail	phage tail tape measure protein	tail	A0A0M5MTI3	Ralstonia_phage	33.3	9.5e-10
WP_096754000.1|2105303_2105600_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096754001.1|2105596_2106934_+	DNA circularization N-terminal domain-containing protein	NA	F6MIL2	Haemophilus_phage	24.9	1.3e-24
WP_096754002.1|2106917_2108036_+|tail	phage tail protein	tail	A0A2H4J9E6	uncultured_Caudovirales_phage	41.1	8.0e-73
WP_096754003.1|2108035_2108698_+|plate	phage baseplate assembly protein V	plate	F6MIL4	Haemophilus_phage	45.5	4.2e-37
WP_061279065.1|2108853_2109201_+	phage GP46 family protein	NA	F6MIL5	Haemophilus_phage	45.2	1.0e-18
WP_061279067.1|2109203_2110295_+|plate	baseplate J/gp47 family protein	plate	A0A0M3LQN4	Mannheimia_phage	42.5	3.0e-64
WP_061279070.1|2110291_2110825_+	DUF2313 domain-containing protein	NA	NA	NA	NA	NA
WP_096754004.1|2110825_2111644_+	hypothetical protein	NA	G4KKN6	Yersinia_phage	55.9	6.6e-08
WP_096754005.1|2111741_2111906_+	DUF1378 family protein	NA	A0A2R2Z345	Escherichia_phage	58.3	2.9e-08
WP_096754006.1|2111978_2112749_+	DNA adenine methylase	NA	A2I2Y7	Vibrio_virus	61.4	7.2e-89
>prophage 3
NZ_CP023525	Cedecea neteri strain FDAARGOS_392 chromosome, complete genome	5214802	2575738	2640443	5214802	protease,capsid,tail,transposase,head,plate,terminase,integrase	Pseudomonas_phage(21.43%)	73	2563737:2563754	2647960:2647977
2563737:2563754	attL	CGTCAGCCAGCGCCAGCC	NA	NA	NA	NA
WP_061276513.1|2575738_2576194_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_061276515.1|2576196_2576739_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_061276517.1|2576716_2577802_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_061276518.1|2577765_2579520_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_061276520.1|2579562_2581164_-	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_174522180.1|2581163_2584595_-	type VI secretion protein VasK	NA	NA	NA	NA	NA
WP_138089268.1|2584591_2585767_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061276526.1|2585831_2586722_-	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
WP_072279140.1|2587075_2587669_-	hypothetical protein	NA	A0A2D1GNR8	Pseudomonas_phage	63.5	1.6e-48
WP_061276528.1|2587833_2588082_+	helix-turn-helix domain-containing protein	NA	A0A2D1GNH1	Pseudomonas_phage	67.1	3.6e-26
WP_096754197.1|2588084_2590148_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	A0A2D1GNK9	Pseudomonas_phage	48.8	3.6e-180
WP_061279176.1|2590157_2591075_+	AAA family ATPase	NA	A0A2D1GNS0	Pseudomonas_phage	50.5	2.2e-76
WP_061279179.1|2591085_2591403_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096754096.1|2591417_2591642_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096754098.1|2591898_2592108_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096754099.1|2592097_2592724_+	DUF3164 family protein	NA	A0A2D1GNM4	Pseudomonas_phage	62.9	4.6e-70
WP_096754100.1|2592725_2592956_+	ANR family transcriptional regulator	NA	NA	NA	NA	NA
WP_096754101.1|2592936_2593131_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096754102.1|2593231_2593609_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096754103.1|2593605_2594295_+	hypothetical protein	NA	A0A1W6JP46	Morganella_phage	33.5	4.5e-26
WP_096754104.1|2594291_2595011_+	DUF2786 domain-containing protein	NA	A0A1W6DYA0	Aeromonas_phage	31.1	1.0e-12
WP_096754105.1|2595010_2595229_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096754106.1|2595320_2595572_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061279209.1|2595574_2595901_+	hypothetical protein	NA	A0A1B0V7L5	Salmonella_phage	52.5	7.9e-05
WP_061279211.1|2596175_2596703_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096754186.1|2597512_2597908_+	regulatory protein GemA	NA	A0A0A7DJY7	Pseudomonas_phage	45.2	5.0e-22
WP_096754107.1|2597909_2598362_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085543080.1|2598448_2598838_+	M15 family metallopeptidase	NA	A0A0A7NQ86	Enterobacteria_phage	66.9	3.3e-42
WP_138089269.1|2598834_2599077_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096754198.1|2599073_2599352_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138089263.1|2599341_2599818_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085543076.1|2600011_2600281_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061279229.1|2600790_2601039_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061279230.1|2601028_2601223_+	hypothetical protein	NA	NA	NA	NA	NA
WP_156479849.1|2601209_2601359_-	hypothetical protein	NA	NA	NA	NA	NA
WP_096753995.1|2601507_2603181_+|terminase	phage terminase large subunit	terminase	B7SDN0	Haemophilus_phage	52.8	7.3e-155
WP_096753996.1|2603183_2604761_+	DUF935 domain-containing protein	NA	A0A0M5MS00	Ralstonia_phage	41.6	3.6e-103
WP_096754108.1|2604747_2606013_+|capsid	minor capsid protein	capsid	A0A0M4UTA3	Ralstonia_phage	40.6	1.9e-62
WP_096753998.1|2606015_2606498_+	phage virion morphogenesis protein	NA	NA	NA	NA	NA
WP_061279000.1|2607844_2608252_+	hypothetical protein	NA	A0A2H4IZH5	uncultured_Caudovirales_phage	43.0	4.5e-26
WP_061279001.1|2608263_2609187_+|head	Mu-like prophage major head subunit gpT family protein	head	A0A2H4J778	uncultured_Caudovirales_phage	56.7	1.6e-95
WP_061279002.1|2609191_2609632_+	DUF1320 domain-containing protein	NA	A0A1X9SGZ3	Bradyrhizobium_phage	38.2	3.3e-14
WP_096754109.1|2609631_2610309_+	DUF1834 family protein	NA	NA	NA	NA	NA
WP_061279004.1|2610320_2610614_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096754110.1|2610617_2612057_+|tail	phage tail sheath subtilisin-like domain-containing protein	tail	B7SDP8	Haemophilus_phage	40.0	7.1e-82
WP_061279007.1|2612068_2612440_+	hypothetical protein	NA	F6MIK8	Haemophilus_phage	46.0	3.6e-22
WP_061279009.1|2612442_2612826_+|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_096753999.1|2612966_2614853_+|tail	phage tail tape measure protein	tail	A0A0M5MTI3	Ralstonia_phage	33.3	9.5e-10
WP_096754000.1|2614930_2615227_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096754001.1|2615223_2616561_+	DNA circularization N-terminal domain-containing protein	NA	F6MIL2	Haemophilus_phage	24.9	1.3e-24
WP_096754002.1|2616544_2617663_+|tail	phage tail protein	tail	A0A2H4J9E6	uncultured_Caudovirales_phage	41.1	8.0e-73
WP_061279063.1|2617662_2618325_+|plate	phage baseplate assembly protein V	plate	F6MIL4	Haemophilus_phage	45.5	4.2e-37
WP_061279065.1|2618480_2618828_+	phage GP46 family protein	NA	F6MIL5	Haemophilus_phage	45.2	1.0e-18
WP_061279067.1|2618830_2619922_+|plate	baseplate J/gp47 family protein	plate	A0A0M3LQN4	Mannheimia_phage	42.5	3.0e-64
WP_061279070.1|2619918_2620452_+	DUF2313 domain-containing protein	NA	NA	NA	NA	NA
WP_096754111.1|2620452_2620680_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138089270.1|2620871_2621270_+	hypothetical protein	NA	NA	NA	NA	NA
WP_072279229.1|2621367_2621532_+	DUF1378 family protein	NA	A0A2R2Z345	Escherichia_phage	58.3	3.8e-08
WP_061279074.1|2621604_2622375_+	DNA adenine methylase	NA	A2I2Y7	Vibrio_virus	61.0	1.0e-87
WP_061279076.1|2622480_2622969_+	hypothetical protein	NA	NA	NA	NA	NA
WP_175404235.1|2623216_2625208_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_156479833.1|2625384_2625528_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061277462.1|2625598_2626342_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061277461.1|2626382_2627339_-	hypothetical protein	NA	NA	NA	NA	NA
WP_138089271.1|2627335_2630065_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061277459.1|2630148_2630415_-	PAAR domain-containing protein	NA	NA	NA	NA	NA
WP_061277458.1|2630430_2632803_-	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	24.7	6.6e-16
WP_061277457.1|2632799_2635451_-	type VI secretion system ATPase TssH	NA	K4FB40	Cronobacter_phage	33.2	5.0e-97
WP_061277456.1|2635633_2636071_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061277455.1|2636212_2636704_-	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_061277454.1|2636707_2638420_-	OmpA family protein	NA	NA	NA	NA	NA
WP_061277453.1|2638416_2639106_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_061277452.1|2639102_2640443_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
2647960:2647977	attR	GGCTGGCGCTGGCTGACG	NA	NA	NA	NA
>prophage 4
NZ_CP023525	Cedecea neteri strain FDAARGOS_392 chromosome, complete genome	5214802	3309623	3319145	5214802	protease,tRNA	Organic_Lake_phycodnavirus(16.67%)	8	NA	NA
WP_061274198.1|3309623_3311345_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	NA	F2Y2R6	Organic_Lake_phycodnavirus	26.7	6.6e-18
WP_061274200.1|3311533_3312229_+|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
WP_002211347.1|3312513_3312732_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_061274202.1|3312830_3315104_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.4	4.3e-166
WP_008461103.1|3315131_3315452_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	47.2	2.4e-14
WP_008461102.1|3315775_3315997_+	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.7	3.6e-17
WP_061274204.1|3316086_3318033_-	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	41.4	2.9e-38
WP_061274206.1|3318029_3319145_-	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	38.9	6.9e-08
>prophage 5
NZ_CP023525	Cedecea neteri strain FDAARGOS_392 chromosome, complete genome	5214802	3532784	3567033	5214802	capsid,tail,head,transposase,plate,terminase,integrase	Haemophilus_phage(23.08%)	47	3526311:3526326	3537429:3537444
3526311:3526326	attL	CTGACGCTGATTACCG	NA	NA	NA	NA
WP_096754128.1|3532784_3534863_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	A0A2D1GNK9	Pseudomonas_phage	49.7	3.0e-182
WP_061279176.1|3534872_3535790_+	AAA family ATPase	NA	A0A2D1GNS0	Pseudomonas_phage	50.5	2.2e-76
WP_096754129.1|3535800_3536118_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096754096.1|3536132_3536357_+	hypothetical protein	NA	NA	NA	NA	NA
WP_175404236.1|3536359_3536536_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096754130.1|3536541_3536769_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096754131.1|3536830_3537040_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096754132.1|3537029_3537656_+	DUF3164 family protein	NA	A0A2D1GNM4	Pseudomonas_phage	61.9	1.8e-69
3537429:3537444	attR	CTGACGCTGATTACCG	NA	NA	NA	NA
WP_096753984.1|3537657_3537888_+	ANR family transcriptional regulator	NA	NA	NA	NA	NA
WP_096753985.1|3537868_3538063_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096754133.1|3538163_3538535_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096754134.1|3538531_3539221_+	hypothetical protein	NA	A0A1W6JP46	Morganella_phage	33.5	5.9e-26
WP_096754135.1|3539217_3539937_+	DUF2786 domain-containing protein	NA	A0A1W6DYA0	Aeromonas_phage	30.9	6.0e-13
WP_096754136.1|3539936_3540155_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096754106.1|3540246_3540498_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061279209.1|3540500_3540827_+	hypothetical protein	NA	A0A1B0V7L5	Salmonella_phage	52.5	7.9e-05
WP_061279211.1|3541102_3541630_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096754137.1|3542440_3542836_+	regulatory protein GemA	NA	A0A2D1GNN4	Pseudomonas_phage	45.3	1.7e-22
WP_096754138.1|3542837_3543290_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096754139.1|3543376_3543766_+	M15 family metallopeptidase	NA	A0A0A7NQ86	Enterobacteria_phage	67.7	3.3e-42
WP_096753994.1|3543762_3544014_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096754204.1|3543997_3544480_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085543076.1|3544672_3544942_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061279232.1|3544941_3545460_+	DUF1804 family protein	NA	A0A0M3VI86	Ralstonia_phage	36.0	8.3e-25
WP_096754140.1|3546168_3547842_+|terminase	phage terminase large subunit	terminase	B7SDN0	Haemophilus_phage	52.2	1.1e-153
WP_096754141.1|3547844_3549422_+	DUF935 domain-containing protein	NA	A0A0M5MS00	Ralstonia_phage	41.4	6.8e-102
WP_096754142.1|3549408_3550671_+|capsid	minor capsid protein	capsid	A0A0M4UTA3	Ralstonia_phage	40.9	3.8e-63
WP_096754205.1|3550685_3551156_+	phage virion morphogenesis protein	NA	NA	NA	NA	NA
WP_082763282.1|3551410_3552517_+	hypothetical protein	NA	A0A2D1GNS3	Pseudomonas_phage	40.8	5.5e-50
WP_061279000.1|3552503_3552911_+	hypothetical protein	NA	A0A2H4IZH5	uncultured_Caudovirales_phage	43.0	4.5e-26
WP_061279001.1|3552922_3553846_+|head	Mu-like prophage major head subunit gpT family protein	head	A0A2H4J778	uncultured_Caudovirales_phage	56.7	1.6e-95
WP_061279002.1|3553850_3554291_+	DUF1320 domain-containing protein	NA	A0A1X9SGZ3	Bradyrhizobium_phage	38.2	3.3e-14
WP_061279003.1|3554290_3554968_+	DUF1834 family protein	NA	NA	NA	NA	NA
WP_061279004.1|3554979_3555273_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061279005.1|3555276_3556716_+|tail	phage tail sheath subtilisin-like domain-containing protein	tail	B7SDP8	Haemophilus_phage	40.2	4.2e-82
WP_061279007.1|3556727_3557099_+	hypothetical protein	NA	F6MIK8	Haemophilus_phage	46.0	3.6e-22
WP_061279009.1|3557101_3557485_+|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_096754143.1|3557625_3559434_+|tail	phage tail tape measure protein	tail	A0A0M5MTI3	Ralstonia_phage	32.2	5.9e-09
WP_096754000.1|3559588_3559885_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096754144.1|3559881_3561219_+	DNA circularization N-terminal domain-containing protein	NA	F6MIL2	Haemophilus_phage	24.9	3.7e-24
WP_061279063.1|3562319_3562982_+|plate	phage baseplate assembly protein V	plate	F6MIL4	Haemophilus_phage	45.5	4.2e-37
WP_061279065.1|3563137_3563485_+	phage GP46 family protein	NA	F6MIL5	Haemophilus_phage	45.2	1.0e-18
WP_061279067.1|3563487_3564579_+|plate	baseplate J/gp47 family protein	plate	A0A0M3LQN4	Mannheimia_phage	42.5	3.0e-64
WP_061279070.1|3564575_3565109_+	DUF2313 domain-containing protein	NA	NA	NA	NA	NA
WP_061279072.1|3565109_3565928_+	hypothetical protein	NA	G4KKN6	Yersinia_phage	55.9	6.6e-08
WP_072279229.1|3566025_3566190_+	DUF1378 family protein	NA	A0A2R2Z345	Escherichia_phage	58.3	3.8e-08
WP_061279074.1|3566262_3567033_+	DNA adenine methylase	NA	A2I2Y7	Vibrio_virus	61.0	1.0e-87
>prophage 6
NZ_CP023525	Cedecea neteri strain FDAARGOS_392 chromosome, complete genome	5214802	3677677	3705649	5214802	integrase,plate,transposase	Enterobacteria_phage(25.0%)	26	3675428:3675442	3697164:3697178
3675428:3675442	attL	GCATAGTGTGGAACT	NA	NA	NA	NA
WP_061279061.1|3677677_3678889_+|integrase	tyrosine-type recombinase/integrase	integrase	Q7M297	Enterobacteria_phage	58.5	3.3e-133
WP_096754148.1|3679650_3680163_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138089283.1|3680261_3680681_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096754149.1|3680709_3681084_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061279102.1|3681107_3681584_+	DUF4234 domain-containing protein	NA	NA	NA	NA	NA
WP_061279104.1|3681632_3681956_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061279106.1|3682553_3683777_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061279107.1|3684361_3685375_-	hypothetical protein	NA	NA	NA	NA	NA
WP_096753947.1|3686516_3687664_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	91.5	8.0e-145
WP_061279128.1|3687859_3688714_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061279130.1|3688706_3691997_+	DEAD/DEAH box helicase	NA	NA	NA	NA	NA
WP_175404230.1|3692341_3692812_-	hypothetical protein	NA	NA	NA	NA	NA
WP_096754151.1|3694004_3694610_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061279182.1|3694637_3694910_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061279184.1|3694906_3695449_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061279186.1|3695826_3696045_-	AlpA family transcriptional regulator	NA	NA	NA	NA	NA
WP_061279188.1|3696155_3696803_-	inovirus Gp2 family protein	NA	NA	NA	NA	NA
WP_096753955.1|3696910_3698031_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	42.5	9.5e-50
3697164:3697178	attR	AGTTCCACACTATGC	NA	NA	NA	NA
WP_096754152.1|3698083_3698881_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_061278378.1|3698871_3699822_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_061278377.1|3699827_3701855_+	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	27.4	9.8e-29
WP_061278375.1|3701864_3702314_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061278373.1|3702313_3702613_+	PAAR domain-containing protein	NA	NA	NA	NA	NA
WP_061278371.1|3702625_3703684_+	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_061278369.1|3703683_3704295_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_061278368.1|3704296_3705649_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
>prophage 7
NZ_CP023525	Cedecea neteri strain FDAARGOS_392 chromosome, complete genome	5214802	4484284	4541488	5214802	integrase,transposase	Stx2-converting_phage(40.0%)	49	4480130:4480144	4486187:4486201
4480130:4480144	attL	CGCTGCCGGTGATTG	NA	NA	NA	NA
WP_061274631.1|4484284_4485274_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_061274633.1|4485296_4486883_-	TraI domain-containing protein	NA	NA	NA	NA	NA
4486187:4486201	attR	CAATCACCGGCAGCG	NA	NA	NA	NA
WP_061274634.1|4486875_4488360_-	ATP-dependent helicase	NA	A0A075DXT4	Acinetobacter_phage	30.6	4.5e-47
WP_138089290.1|4488467_4488983_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061274638.1|4489265_4489649_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_072279108.1|4489656_4490343_-	helix-turn-helix transcriptional regulator	NA	A2I306	Vibrio_virus	33.2	1.4e-27
WP_082763192.1|4490541_4491270_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_061274644.1|4492490_4492772_+	hypothetical protein	NA	NA	NA	NA	NA
WP_174522175.1|4492761_4494555_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061274646.1|4494704_4495373_-	hypothetical protein	NA	A0A2K9V411	Faecalibacterium_phage	40.1	1.0e-30
WP_072279109.1|4495496_4496432_-	DUF1281 domain-containing protein	NA	NA	NA	NA	NA
WP_061274648.1|4496519_4496870_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061274650.1|4496992_4497382_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061274653.1|4497478_4497829_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061274655.1|4498475_4498799_+	hypothetical protein	NA	NA	NA	NA	NA
WP_082763193.1|4498908_4499301_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_082763194.1|4499658_4499835_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_061274658.1|4501003_4501393_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061274663.1|4502795_4503575_-	DUF1835 domain-containing protein	NA	NA	NA	NA	NA
WP_096754159.1|4503672_4514448_-	Ig-like domain-containing protein	NA	NA	NA	NA	NA
WP_138089291.1|4514480_4515116_+|transposase	transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	43.3	2.9e-19
WP_061279193.1|4515112_4515460_+	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZDM8	Stx2-converting_phage	70.1	2.9e-42
WP_061279191.1|4515479_4517051_+|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	60.4	3.0e-174
WP_138089292.1|4517215_4517521_-	hypothetical protein	NA	NA	NA	NA	NA
WP_138089293.1|4517609_4518884_+	RNA-directed DNA polymerase	NA	A0A0C5K882	ANMV-1_virus	31.1	3.4e-35
WP_061279154.1|4518919_4519105_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061279156.1|4519288_4519783_-	hypothetical protein	NA	NA	NA	NA	NA
WP_072279218.1|4526732_4526993_-	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_082763278.1|4527457_4528426_+|transposase	IS5 family transposase	transposase	A0A1B0VFY5	Salmonella_phage	94.1	5.7e-176
WP_061278956.1|4528470_4529304_-	N-6 DNA methylase	NA	NA	NA	NA	NA
WP_061278954.1|4529346_4529613_-	hypothetical protein	NA	NA	NA	NA	NA
WP_047359689.1|4529697_4530042_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061278952.1|4530088_4530376_-	hypothetical protein	NA	NA	NA	NA	NA
WP_032637252.1|4530429_4530804_-	hypothetical protein	NA	A0A248SL90	Klebsiella_phage	62.7	1.7e-27
WP_061278950.1|4531435_4531810_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061278948.1|4531871_4532195_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061278946.1|4532191_4532920_-	plasmid SOS inhibition protein A	NA	NA	NA	NA	NA
WP_061278944.1|4532916_4533348_-	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA	NA
WP_061278942.1|4533390_4535160_-	ParB/RepB/Spo0J family partition protein	NA	G8DH78	Emiliania_huxleyi_virus	30.6	2.1e-27
WP_002211745.1|4535232_4535463_-	DUF905 domain-containing protein	NA	NA	NA	NA	NA
WP_156479845.1|4535532_4535682_+	hypothetical protein	NA	NA	NA	NA	NA
WP_156479844.1|4535919_4536120_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061278940.1|4536255_4536762_-	antirestriction protein ArdA	NA	A0A1I9S7Y0	Rhodococcus_phage	28.3	9.1e-08
WP_061278938.1|4537163_4537580_-	DUF1380 family protein	NA	NA	NA	NA	NA
WP_061278937.1|4537636_4537858_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061278935.1|4537857_4538535_-	DNA methylase	NA	A0A2K9VH43	Faecalibacterium_phage	37.3	1.4e-27
WP_138089291.1|4538917_4539553_+|transposase	transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	43.3	2.9e-19
WP_061279193.1|4539549_4539897_+	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZDM8	Stx2-converting_phage	70.1	2.9e-42
WP_061279191.1|4539916_4541488_+|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	60.4	3.0e-174
>prophage 1
NZ_CP023526	Cedecea neteri strain FDAARGOS_392 plasmid unnamed, complete sequence	254496	63890	135226	254496	integrase,transposase	Enterobacteria_phage(22.22%)	48	103193:103208	135815:135830
WP_061279134.1|63890_66896_-|transposase	Tn3 family transposase	transposase	Q1MVP5	Enterobacteria_phage	93.8	0.0e+00
WP_061279136.1|67059_67605_+	recombinase family protein	NA	Q1MVP4	Enterobacteria_phage	90.6	1.4e-83
WP_061279138.1|67650_68133_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_061278095.1|68785_69052_+	DUF1778 domain-containing protein	NA	NA	NA	NA	NA
WP_061278097.1|69039_69525_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_082763257.1|69721_71068_+|transposase	ISNCY family transposase	transposase	NA	NA	NA	NA
WP_061278100.1|72125_72419_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061278102.1|72850_73177_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_061278104.1|73176_73404_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_138089311.1|74282_74483_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_061278158.1|74479_75097_-	hypothetical protein	NA	NA	NA	NA	NA
WP_072279197.1|75267_75600_-	multidrug DMT transporter	NA	NA	NA	NA	NA
WP_138089312.1|76054_77335_+	MASE1 domain-containing protein	NA	NA	NA	NA	NA
WP_061278112.1|77338_78616_+	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA	NA
WP_169799428.1|78618_79242_+	DUF4105 domain-containing protein	NA	NA	NA	NA	NA
WP_096754220.1|79216_80385_-|transposase	IS3 family transposase	transposase	Q716C2	Shigella_phage	94.1	1.3e-174
WP_061278120.1|80726_81467_+	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_061278121.1|82621_83059_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061278123.1|83052_83769_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061278128.1|85266_86472_+	efflux RND transporter periplasmic adaptor subunit	NA	A0A140XAI1	Dickeya_phage	44.7	1.6e-10
WP_096754221.1|86468_88406_+	MacB family efflux pump subunit	NA	G9BWD6	Planktothrix_phage	37.8	2.2e-33
WP_061278134.1|88409_89789_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_169799429.1|90571_91057_+	DUF2975 domain-containing protein	NA	NA	NA	NA	NA
WP_061278140.1|91058_91265_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_138089315.1|91441_92182_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138089316.1|92694_94116_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061278148.1|95633_95888_-	hypothetical protein	NA	NA	NA	NA	NA
WP_072279195.1|96556_97150_-	lytic polysaccharide monooxygenase	NA	A0A0K1Y848	Apis_mellifera_filamentous_virus	39.8	2.8e-24
WP_138089317.1|97733_97952_-	hypothetical protein	NA	NA	NA	NA	NA
WP_096754222.1|99389_102098_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	A0A2L1IV18	Escherichia_phage	45.0	6.0e-90
WP_096754223.1|102317_104501_-	hypothetical protein	NA	NA	NA	NA	NA
103193:103208	attL	GCGCTGGTGAGTCATC	NA	NA	NA	NA
WP_138089318.1|104661_105723_-	Ig-like domain-containing protein	NA	NA	NA	NA	NA
WP_061278998.1|105805_108526_-	hypothetical protein	NA	NA	NA	NA	NA
WP_138089319.1|108967_110623_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061278995.1|112137_113160_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_096754224.1|114108_119655_-	hypothetical protein	NA	B6SD27	Bacteriophage	31.9	2.2e-163
WP_169799419.1|119653_119914_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061277661.1|120402_120714_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138089320.1|122547_124395_-	hypothetical protein	NA	NA	NA	NA	NA
WP_072279178.1|125023_125650_-	DUF2913 family protein	NA	NA	NA	NA	NA
WP_061277656.1|126929_127274_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061277655.1|127382_127703_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061277653.1|130315_131257_-	DUF535 domain-containing protein	NA	NA	NA	NA	NA
WP_061277652.1|132104_132320_+	hypothetical protein	NA	NA	NA	NA	NA
WP_082763248.1|132646_134257_-|transposase	IS66 family transposase	transposase	A0A218MNE7	uncultured_virus	37.4	1.0e-81
WP_061277651.1|134263_134644_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_072279177.1|134630_134963_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
WP_061277649.1|135037_135226_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
135815:135830	attR	GATGACTCACCAGCGC	NA	NA	NA	NA
