The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP023641	Pseudomonas mendocina strain MAE1-K chromosome, complete genome	5157724	25554	60933	5157724	transposase	Leptospira_phage(22.22%)	32	NA	NA
WP_003299771.1|25554_28548_+|transposase	Tn3 family transposase	transposase	Q1MVP5	Enterobacteria_phage	47.6	5.7e-259
WP_003089113.1|28560_28773_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003150552.1|28780_29056_-	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA	NA
WP_003089115.1|29068_29419_-	mercury transporter MerT	NA	NA	NA	NA	NA
WP_003089120.1|29493_29892_+	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_016487046.1|30250_30928_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003465041.1|31009_31600_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003465039.1|31690_32392_+	cysteine hydrolase	NA	NA	NA	NA	NA
WP_003465037.1|32446_32671_+	DUF2798 domain-containing protein	NA	NA	NA	NA	NA
WP_003465034.1|32951_34004_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003465031.1|34329_35259_+	ABC transporter permease	NA	Q6GZ02	Mycoplasma_phage	23.6	6.3e-07
WP_003465028.1|35259_36054_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003465026.1|37471_38500_-|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	36.6	1.5e-46
WP_096824895.1|38524_39151_-	site-specific DNA-methyltransferase	NA	A0A2K5B255	Erysipelothrix_phage	33.6	7.3e-15
WP_045107762.1|39997_40951_+|transposase	IS1595-like element ISAchd1 family transposase	transposase	NA	NA	NA	NA
WP_003465021.1|41169_42099_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA	NA
WP_003465017.1|42213_43098_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003830781.1|43281_43545_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011347519.1|43396_43954_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003465000.1|43955_44504_-	cytochrome P460 family protein	NA	NA	NA	NA	NA
WP_020309197.1|44531_45065_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023444849.1|45182_46025_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010465829.1|46468_47071_+	recombinase family protein	NA	A0A0C4UR34	Shigella_phage	50.3	1.6e-40
WP_024015041.1|47054_50084_+|transposase	Tn3 family transposase	transposase	NA	NA	NA	NA
WP_003464995.1|50320_51166_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_003464991.1|51195_51714_-	DUF417 family protein	NA	NA	NA	NA	NA
WP_078451460.1|52467_52824_+	IS66 family insertion sequence element accessory protein TnpB	NA	S5VXZ8	Leptospira_phage	42.9	4.0e-18
WP_096824896.1|52843_54412_+|transposase	IS66 family transposase	transposase	S5VTD3	Leptospira_phage	36.8	2.8e-84
WP_096824897.1|55668_57156_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	39.2	4.2e-53
WP_010455375.1|57161_58283_-|transposase	ISAs1-like element ISPa60 family transposase	transposase	NA	NA	NA	NA
WP_096824898.1|58637_59441_-	ATP-binding protein	NA	A0A2L1IVB6	Escherichia_phage	36.2	5.2e-34
WP_137188585.1|59433_60933_-|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP023641	Pseudomonas mendocina strain MAE1-K chromosome, complete genome	5157724	3067344	3074485	5157724	tRNA	uncultured_Caudovirales_phage(85.71%)	9	NA	NA
WP_003240629.1|3067344_3068013_+	Bax inhibitor-1/YccA family protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	83.9	4.4e-95
WP_090429069.1|3068148_3068541_+	sulfurtransferase complex subunit TusD	NA	A0A2H4JA39	uncultured_Caudovirales_phage	76.0	8.7e-51
WP_096826552.1|3068541_3068901_+	sulfurtransferase complex subunit TusC	NA	A0A2H4J8C0	uncultured_Caudovirales_phage	64.2	1.1e-34
WP_003240635.1|3068900_3069200_+	sulfurtransferase complex subunit TusB	NA	A0A2H4JG28	uncultured_Caudovirales_phage	63.6	2.7e-28
WP_096826553.1|3069196_3069532_+	TusE/DsrC/DsvC family sulfur relay protein	NA	A0A2H4J8B6	uncultured_Caudovirales_phage	78.4	5.2e-44
WP_096826554.1|3069528_3070524_+	glycosyl transferase family protein	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	77.6	2.0e-144
WP_096826555.1|3070598_3071597_+	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_096826556.1|3071641_3073030_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_003240645.1|3073204_3074485_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	55.1	3.9e-100
>prophage 3
NZ_CP023641	Pseudomonas mendocina strain MAE1-K chromosome, complete genome	5157724	3663206	3688207	5157724	holin	Pseudomonas_phage(50.0%)	42	NA	NA
WP_096826846.1|3663206_3663761_-	glycoside hydrolase family protein	NA	A0A0U1UNS2	Pseudomonas_phage	64.6	8.6e-60
WP_096826847.1|3663760_3664024_-|holin	holin	holin	A0A0U1UNM6	Pseudomonas_phage	68.0	1.1e-20
WP_096826848.1|3664161_3664443_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157761697.1|3664439_3664910_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157761698.1|3664993_3665158_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157761699.1|3665369_3666002_-	hypothetical protein	NA	A0A2I7RQG7	Vibrio_phage	47.0	4.5e-49
WP_096826852.1|3665986_3666655_-	hypothetical protein	NA	A0A2H4JA27	uncultured_Caudovirales_phage	70.1	1.2e-71
WP_096826854.1|3666857_3667139_-	hypothetical protein	NA	NA	NA	NA	NA
WP_096826855.1|3667135_3667663_-	hypothetical protein	NA	A0A2K8I9A9	Pseudomonas_phage	58.8	8.7e-54
WP_096826856.1|3667659_3668097_-	HNH endonuclease	NA	R4JQQ9	Mycobacterium_phage	44.1	2.3e-23
WP_096826857.1|3668089_3668401_-	hypothetical protein	NA	NA	NA	NA	NA
WP_096826858.1|3668393_3668732_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157761700.1|3668724_3668901_-	hypothetical protein	NA	NA	NA	NA	NA
WP_096826859.1|3668890_3669640_-	Replication protein P	NA	A0A2D1GNB3	Pseudomonas_phage	47.4	1.0e-39
WP_157761701.1|3669636_3670407_-	hypothetical protein	NA	A0A0A7RVZ8	Mycobacterium_phage	36.1	9.9e-06
WP_096826861.1|3670559_3670739_-	hypothetical protein	NA	NA	NA	NA	NA
WP_096826862.1|3670748_3670949_-	Cro/Cl family transcriptional regulator	NA	A0A0S2SYB8	Pseudomonas_phage	48.3	4.3e-06
WP_096826863.1|3671058_3671727_+	LexA family transcriptional regulator	NA	H2BDH4	Pseudomonas_virus	56.9	9.9e-71
WP_157761702.1|3671888_3672209_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096826864.1|3672413_3672764_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157761703.1|3672760_3672913_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096826865.1|3672905_3673121_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157761704.1|3673113_3673254_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096826866.1|3673354_3673585_+	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
WP_096826867.1|3673597_3674251_+	ERF family protein	NA	A0A1Y0T023	Pseudomonas_phage	52.6	3.9e-27
WP_096826868.1|3674247_3675906_+	Heme peroxidase	NA	A0A2H4J6P1	uncultured_Caudovirales_phage	59.2	9.5e-131
WP_096826869.1|3675980_3676565_+	3'-5' exonuclease	NA	A0A0U1W072	Pseudomonas_phage	72.8	1.4e-76
WP_096826870.1|3676882_3677452_+	hypothetical protein	NA	A0A0A0RNU5	Citrobacter_phage	44.9	7.5e-43
WP_096826871.1|3677448_3677937_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096826872.1|3677939_3678350_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096826873.1|3678360_3679599_+	recombination-associated protein RdgC	NA	L7TP07	Pseudomonas_virus	68.6	2.7e-114
WP_096826874.1|3679591_3679801_+	Arc family DNA-binding protein	NA	A0A1W6JTB4	Pseudomonas_phage	56.4	4.1e-07
WP_096826875.1|3679797_3682353_+	DNA methylase N-4	NA	J7I4L6	Pseudomonas_phage	65.3	0.0e+00
WP_096827766.1|3682358_3682604_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096826876.1|3682603_3683329_+	hypothetical protein	NA	A0A2H5BFW5	Vibrio_phage	45.9	6.0e-53
WP_096826877.1|3683957_3684425_+	hypothetical protein	NA	A0A2H4J101	uncultured_Caudovirales_phage	57.4	7.7e-46
WP_096826878.1|3684519_3685305_+	hypothetical protein	NA	A0A1B0YZY3	Pseudomonas_phage	57.7	6.0e-83
WP_157761705.1|3685455_3686079_+	hypothetical protein	NA	Q6J1P0	Burkholderia_virus	44.3	2.8e-11
WP_096826880.1|3686075_3686852_+	DUF4406 domain-containing protein	NA	V5JVS6	Pseudomonas_phage	74.4	2.6e-30
WP_096826881.1|3686844_3687072_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096826882.1|3687068_3687665_+	hypothetical protein	NA	J9Q748	Salmonella_phage	37.7	6.2e-24
WP_096827768.1|3687742_3688207_+	DUF4406 domain-containing protein	NA	A0A2K8I958	Pseudomonas_phage	56.0	1.8e-23
>prophage 4
NZ_CP023641	Pseudomonas mendocina strain MAE1-K chromosome, complete genome	5157724	4875226	4939620	5157724	protease,tRNA,holin	Tupanvirus(25.0%)	59	NA	NA
WP_096827542.1|4875226_4876663_-|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_096827543.1|4876659_4877460_-	thermonuclease family protein	NA	NA	NA	NA	NA
WP_004372913.1|4877486_4877699_-	50S ribosomal protein L31	NA	NA	NA	NA	NA
WP_096827544.1|4877855_4880075_+	primosomal protein N'	NA	NA	NA	NA	NA
WP_096827545.1|4880247_4881987_+|tRNA	arginine--tRNA ligase	tRNA	A0A2K9L2F0	Tupanvirus	33.8	6.4e-85
WP_011920753.1|4881987_4882662_+	cell division protein	NA	NA	NA	NA	NA
WP_004372920.1|4882758_4883289_+|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_096827546.1|4883328_4884669_+	HslU--HslV peptidase ATPase subunit	NA	A0A173GFL6	Erwinia_phage	28.2	1.4e-44
WP_011920751.1|4884750_4885122_+	DUF971 domain-containing protein	NA	NA	NA	NA	NA
WP_004372926.1|4885510_4887190_+	class II poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA	NA
WP_004372928.1|4887343_4888201_+	poly(3-hydroxyalkanoate) depolymerase	NA	A0A1L7N183	Ralstonia_phage	49.6	3.7e-70
WP_096827547.1|4888409_4890092_+	class II poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA	NA
WP_004372933.1|4890163_4890778_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_096827548.1|4890860_4891685_-	phasin family protein	NA	NA	NA	NA	NA
WP_004372937.1|4891695_4892142_-	phasin family protein	NA	NA	NA	NA	NA
WP_004372939.1|4892313_4892589_-	polyhydroxyalkanoic acid system protein	NA	NA	NA	NA	NA
WP_004372941.1|4892735_4893506_+	bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	NA	NA	NA	NA	NA
WP_096827549.1|4893505_4894123_+	SCP2 domain-containing protein	NA	NA	NA	NA	NA
WP_096827550.1|4894119_4895703_+	ubiquinone biosynthesis regulatory protein kinase UbiB	NA	E5EQ95	Micromonas_sp._RCC1109_virus	28.3	2.2e-36
WP_004372946.1|4895773_4896172_+	phosphoribosyl-AMP cyclohydrolase	NA	NA	NA	NA	NA
WP_011920745.1|4896164_4896500_+	phosphoribosyl-ATP diphosphatase	NA	NA	NA	NA	NA
WP_011920744.1|4896522_4896756_+	twin-arginine translocase TatA/TatE family subunit	NA	NA	NA	NA	NA
WP_011920743.1|4896759_4897101_+	Sec-independent protein translocase subunit TatB	NA	NA	NA	NA	NA
WP_011920742.1|4897097_4897892_+	twin-arginine translocase subunit TatC	NA	NA	NA	NA	NA
WP_011920741.1|4897888_4898599_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_011920740.1|4898680_4899118_-|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
WP_004372958.1|4899114_4900086_-	prolyl aminopeptidase	NA	NA	NA	NA	NA
WP_096827551.1|4900164_4900602_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096827552.1|4900715_4901258_-	lipocalin family protein	NA	A0A2K9L4H1	Tupanvirus	38.5	1.9e-19
WP_004372964.1|4901270_4901522_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
WP_096827553.1|4901594_4902194_-	DUF924 domain-containing protein	NA	NA	NA	NA	NA
WP_004372967.1|4902197_4903205_-	class 1 fructose-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	37.8	2.6e-54
WP_096827554.1|4903361_4905206_-	autotransporter domain-containing protein	NA	NA	NA	NA	NA
WP_096827555.1|4907127_4908480_-	DUF3999 domain-containing protein	NA	NA	NA	NA	NA
WP_096827556.1|4908476_4912100_-	DUF2339 domain-containing protein	NA	NA	NA	NA	NA
WP_011920733.1|4912324_4912720_+	YkgJ family cysteine cluster protein	NA	NA	NA	NA	NA
WP_011920732.1|4912765_4913953_-	gamma-butyrobetaine dioxygenase	NA	NA	NA	NA	NA
WP_096827557.1|4914042_4914519_-	4-hydroxybenzoyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_011920730.1|4914627_4915593_-	L-carnitine dehydrogenase	NA	NA	NA	NA	NA
WP_011920729.1|4915726_4916611_-	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA	NA
WP_004372984.1|4916712_4917651_-|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
WP_004372985.1|4917875_4918826_+	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
WP_004372987.1|4919013_4919991_+	peptidase M19	NA	NA	NA	NA	NA
WP_004372990.1|4920121_4920652_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004372992.1|4920750_4922811_+	dimethylglycine demethylation protein DgcA	NA	NA	NA	NA	NA
WP_096827558.1|4922963_4924925_+	dimethylglycine demethylation protein DgcB	NA	NA	NA	NA	NA
WP_096827559.1|4924962_4926195_+	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA	NA
WP_004372999.1|4926257_4927031_+	electron transfer flavoprotein subunit beta	NA	NA	NA	NA	NA
WP_004373001.1|4927056_4927308_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004373003.1|4927493_4928588_-	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
WP_096827560.1|4928661_4928904_-	hypothetical protein	NA	NA	NA	NA	NA
WP_096827561.1|4929273_4930218_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_004373010.1|4931182_4932388_+	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	39.4	8.2e-31
WP_004373012.1|4932380_4933265_+|holin	choline ABC transporter permease subunit	holin	NA	NA	NA	NA
WP_004373014.1|4933292_4934237_+|holin	choline ABC transporter substrate-binding protein	holin	NA	NA	NA	NA
WP_096827562.1|4934433_4935285_+	glycine betaine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_004373018.1|4935469_4936060_+	transcriptional regulator BetI	NA	NA	NA	NA	NA
WP_096827563.1|4936370_4937843_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_096827564.1|4937922_4939620_+|holin	choline dehydrogenase	holin	A0A1V0S9M4	Catovirus	30.3	1.1e-49
