prefix	bacteria_id	bacteria_def	genome_size	prophage_start	prophage_end	method	key_proteins	best_hit_species	CDS_number	attl_region	attr_region
GCF_002442995.2_ASM244299v2	NZ_CP020753	Shigella flexneri 1c strain Y394 chromosome, complete genome	4584634	171896	251870	DBSCAN-SWA	plate,protease,coat,tRNA,terminase,transposase	Salmonella_phage(19.05%)	63	NA	NA
GCF_002442995.2_ASM244299v2	NZ_CP020753	Shigella flexneri 1c strain Y394 chromosome, complete genome	4584634	263952	328181	DBSCAN-SWA	tail,transposase	Enterobacteria_phage(30.0%)	51	NA	NA
GCF_002442995.2_ASM244299v2	NZ_CP020753	Shigella flexneri 1c strain Y394 chromosome, complete genome	4584634	656000	825475	DBSCAN-SWA	lysis,head,integrase,capsid,holin,tRNA,terminase,tail,transposase	Enterobacteria_phage(24.44%)	162	706695:706754	732536:733866
GCF_002442995.2_ASM244299v2	NZ_CP020753	Shigella flexneri 1c strain Y394 chromosome, complete genome	4584634	911750	977148	DBSCAN-SWA	protease,transposase,tRNA	Bacillus_phage(22.22%)	45	NA	NA
GCF_002442995.2_ASM244299v2	NZ_CP020753	Shigella flexneri 1c strain Y394 chromosome, complete genome	4584634	1069629	1108092	DBSCAN-SWA	transposase	Shigella_phage(50.0%)	28	NA	NA
GCF_002442995.2_ASM244299v2	NZ_CP020753	Shigella flexneri 1c strain Y394 chromosome, complete genome	4584634	1180978	1194442	DBSCAN-SWA	protease,head,integrase,terminase,portal,tail	uncultured_Caudovirales_phage(90.91%)	20	1171257:1171271	1190310:1190324
GCF_002442995.2_ASM244299v2	NZ_CP020753	Shigella flexneri 1c strain Y394 chromosome, complete genome	4584634	1389245	1419751	DBSCAN-SWA	integrase,transposase	Escherichia_phage(61.9%)	27	1396723:1396782	1414291:1415058
GCF_002442995.2_ASM244299v2	NZ_CP020753	Shigella flexneri 1c strain Y394 chromosome, complete genome	4584634	1570490	1580944	DBSCAN-SWA	holin,transposase	Escherichia_phage(23.08%)	15	NA	NA
GCF_002442995.2_ASM244299v2	NZ_CP020753	Shigella flexneri 1c strain Y394 chromosome, complete genome	4584634	1794807	1827883	DBSCAN-SWA	transposase	Shigella_phage(37.5%)	27	NA	NA
GCF_002442995.2_ASM244299v2	NZ_CP020753	Shigella flexneri 1c strain Y394 chromosome, complete genome	4584634	1855664	1964521	DBSCAN-SWA	tail,transposase,tRNA	Enterobacteria_phage(28.89%)	92	NA	NA
GCF_002442995.2_ASM244299v2	NZ_CP020753	Shigella flexneri 1c strain Y394 chromosome, complete genome	4584634	2035204	2063168	DBSCAN-SWA	holin,integrase,tail,transposase	Shigella_phage(23.08%)	21	2044403:2044418	2075140:2075155
GCF_002442995.2_ASM244299v2	NZ_CP020753	Shigella flexneri 1c strain Y394 chromosome, complete genome	4584634	2077170	2083154	DBSCAN-SWA	integrase,holin	Escherichia_phage(37.5%)	9	2076885:2076944	2093901:2094170
GCF_002442995.2_ASM244299v2	NZ_CP020753	Shigella flexneri 1c strain Y394 chromosome, complete genome	4584634	2122029	2128336	DBSCAN-SWA		Enterobacteria_phage(50.0%)	6	NA	NA
GCF_002442995.2_ASM244299v2	NZ_CP020753	Shigella flexneri 1c strain Y394 chromosome, complete genome	4584634	2156057	2236948	DBSCAN-SWA	tail,transposase,tRNA	Enterobacteria_phage(50.0%)	54	NA	NA
GCF_002442995.2_ASM244299v2	NZ_CP020753	Shigella flexneri 1c strain Y394 chromosome, complete genome	4584634	2255325	2325734	DBSCAN-SWA	lysis,integrase,transposase,tRNA	Vibrio_phage(18.75%)	59	2287473:2287489	2334738:2334754
GCF_002442995.2_ASM244299v2	NZ_CP020753	Shigella flexneri 1c strain Y394 chromosome, complete genome	4584634	2638742	2646211	DBSCAN-SWA	transposase	Escherichia_phage(66.67%)	7	NA	NA
GCF_002442995.2_ASM244299v2	NZ_CP020753	Shigella flexneri 1c strain Y394 chromosome, complete genome	4584634	2850008	2859905	DBSCAN-SWA	transposase	Pseudomonas_phage(42.86%)	7	NA	NA
GCF_002442995.2_ASM244299v2	NZ_CP020753	Shigella flexneri 1c strain Y394 chromosome, complete genome	4584634	3856385	3915586	DBSCAN-SWA	transposase,tRNA	Stx2-converting_phage(27.27%)	48	NA	NA
GCF_002442995.2_ASM244299v2	NZ_CP020753	Shigella flexneri 1c strain Y394 chromosome, complete genome	4584634	4304447	4374576	DBSCAN-SWA	integrase,transposase,tRNA	Stx2-converting_phage(30.77%)	56	4352703:4352723	4381797:4381817
GCF_002442995.2_ASM244299v2	NZ_CP030773	Shigella flexneri 1c strain Y394 plasmid pINV-Y394, complete sequence	221293	990	101712	DBSCAN-SWA	transposase,protease	Escherichia_phage(38.89%)	52	NA	NA
GCF_002442995.2_ASM244299v2	NZ_CP030773	Shigella flexneri 1c strain Y394 plasmid pINV-Y394, complete sequence	221293	144775	185735	DBSCAN-SWA	transposase,protease	Stx2-converting_phage(45.45%)	29	NA	NA
