The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP023579	Mycobacterium tuberculosis strain LE492 chromosome, complete genome	4411208	2940905	2976271	4411208	capsid,transposase,protease,terminase,head,integrase,tRNA	Tupanvirus(11.11%)	40	2969708:2969735	2980688:2980715
WP_003413486.1|2940905_2942984_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	34.9	2.5e-104
WP_003413487.1|2943092_2943320_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096865268.1|2943316_2944702_-	PE family protein	NA	NA	NA	NA	NA
WP_003413569.1|2945046_2945547_+	DUF1990 family protein	NA	NA	NA	NA	NA
WP_003906873.1|2945563_2946004_-	DoxX family membrane protein	NA	NA	NA	NA	NA
WP_003901437.1|2946150_2946828_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_003413583.1|2946812_2947166_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_003413586.1|2947178_2947604_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003413588.1|2947600_2948275_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003413589.1|2948352_2949174_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_003413592.1|2949309_2950203_+	universal stress protein	NA	NA	NA	NA	NA
WP_003413594.1|2950205_2951024_-	universal stress protein	NA	NA	NA	NA	NA
WP_003899401.1|2951038_2952220_-|protease	site-2 protease family protein	protease	NA	NA	NA	NA
WP_003413598.1|2952278_2952710_-	CBS domain-containing protein	NA	A0A2I6B2H4	Macacine_betaherpesvirus	100.0	1.9e-75
WP_003899402.1|2953223_2954465_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003899403.1|2954774_2955137_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413610.1|2955483_2956608_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413614.1|2956609_2957149_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413616.1|2957288_2958587_+	RNA-splicing ligase RtcB	NA	A2RQD0	Archaeal_BJ1_virus	43.3	3.8e-90
WP_003413619.1|2958625_2958907_-	DUF1876 domain-containing protein	NA	NA	NA	NA	NA
WP_003413625.1|2959051_2959537_-	hemerythrin domain-containing protein	NA	NA	NA	NA	NA
WP_003902325.1|2959563_2959821_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003899405.1|2962188_2962431_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003899406.1|2962431_2963109_+	membrane protein	NA	NA	NA	NA	NA
WP_003413654.1|2963304_2963961_+	DedA family protein	NA	NA	NA	NA	NA
WP_003413657.1|2964123_2964570_+	anti-sigma factor antagonist	NA	NA	NA	NA	NA
WP_003413663.1|2964744_2965077_-	YnfA family protein	NA	NA	NA	NA	NA
WP_003413665.1|2965196_2965556_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003413675.1|2965657_2966116_+	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_003899407.1|2966251_2966632_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003413686.1|2966628_2968125_+	ACR3 family arsenite efflux transporter	NA	A0A2H4PQT9	Staphylococcus_phage	39.7	5.1e-14
WP_085972563.1|2968314_2968551_+	antitoxin MazE family protein	NA	NA	NA	NA	NA
WP_077365235.1|2968623_2968797_+	hypothetical protein	NA	NA	NA	NA	NA
2969708:2969735	attL	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
WP_003899409.1|2969841_2970273_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003900538.1|2970269_2971268_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2D1G8E2	Mycobacterium_phage	47.8	7.4e-62
WP_003900539.1|2971281_2971746_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_087902221.1|2971878_2973139_+|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
WP_003899411.1|2973511_2974951_-|capsid	phage major capsid protein	capsid	A0A1B3AYS4	Gordonia_phage	40.6	1.4e-66
WP_003899412.1|2974958_2975492_-|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	32.9	3.1e-06
WP_003899413.1|2975644_2976271_-|terminase	phage terminase small subunit P27 family	terminase	V9H0V4	Actinophage	47.2	1.6e-17
2980688:2980715	attR	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
>prophage 2
NZ_CP023579	Mycobacterium tuberculosis strain LE492 chromosome, complete genome	4411208	3710134	3796063	4411208	transposase,tRNA	Burkholderia_virus(28.57%)	57	NA	NA
WP_087902221.1|3710134_3711395_+|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
WP_009937401.1|3711450_3711612_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_003902445.1|3711633_3713163_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_070892666.1|3713095_3714034_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_003902446.1|3714042_3715410_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	25.8	9.0e-18
WP_003417415.1|3715478_3716696_+	D-alanyl-D-alanine carboxypeptidase DacB1	NA	A0A1P8VVG5	Erythrobacter_phage	27.3	8.0e-10
WP_003417416.1|3716791_3718300_+	sugar porter family MFS transporter	NA	NA	NA	NA	NA
WP_003417418.1|3718296_3719448_+	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA	NA
WP_003417421.1|3719638_3720484_-	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_003900026.1|3720958_3721399_+	heavy metal-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003417435.1|3721432_3722302_-	inner membrane protein YhjD	NA	NA	NA	NA	NA
WP_003417440.1|3722322_3723333_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_009940431.1|3723617_3724250_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_003417452.1|3724316_3725546_-	NADP-dependent isocitrate dehydrogenase	NA	NA	NA	NA	NA
WP_003900028.1|3725828_3727178_+	bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase	NA	A0A0B5JD48	Pandoravirus	26.5	2.5e-12
WP_003417458.1|3727189_3728329_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003417461.1|3728325_3729057_+	methyltransferase	NA	NA	NA	NA	NA
WP_096865259.1|3729065_3736637_-	PPE family protein	NA	NA	NA	NA	NA
WP_003417619.1|3742899_3743157_-	DUF3017 domain-containing protein	NA	NA	NA	NA	NA
WP_009938649.1|3743412_3752886_-	PPE family protein	NA	NA	NA	NA	NA
WP_049961743.1|3753511_3753958_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_003900675.1|3753994_3754735_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_009938650.1|3755029_3755317_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009939158.1|3755653_3766804_-	PPE family protein	NA	NA	NA	NA	NA
WP_003417738.1|3767047_3767842_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417739.1|3767923_3768295_-	FAD-binding oxidoreductase	NA	A0A0B5JBT9	Pandoravirus	56.4	3.3e-15
WP_157132559.1|3768192_3768411_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417741.1|3768437_3768698_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417745.1|3768812_3769202_+	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_003417749.1|3769215_3769509_-	DUF3017 domain-containing protein	NA	NA	NA	NA	NA
WP_003417751.1|3769505_3770351_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	NA	NA	NA	NA
WP_003417757.1|3770474_3770750_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_003417760.1|3770746_3771004_+	Txe/YoeB family addiction module toxin	NA	NA	NA	NA	NA
WP_003900033.1|3771045_3772236_+	NADH:flavin oxidoreductase	NA	NA	NA	NA	NA
WP_003417765.1|3772352_3772721_+	FHA domain-containing protein	NA	NA	NA	NA	NA
WP_003417767.1|3772717_3773269_-	pentapeptide repeat protein MfpA	NA	NA	NA	NA	NA
WP_003417769.1|3773275_3773857_-	ATP/GTP-binding protein	NA	NA	NA	NA	NA
WP_003417772.1|3773837_3774206_-	DUF742 domain-containing protein	NA	NA	NA	NA	NA
WP_003417776.1|3774183_3774576_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003907034.1|3774572_3777203_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_003417878.1|3777438_3777903_+|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	tRNA	NA	NA	NA	NA
WP_010886167.1|3778269_3780036_+	PE family protein	NA	NA	NA	NA	NA
WP_003417881.1|3780036_3780681_-	nitroreductase family protein	NA	NA	NA	NA	NA
WP_003417882.1|3780679_3781114_+	TIGR03667 family PPOX class F420-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003908228.1|3781202_3784442_-	error-prone DNA polymerase DnaE2	NA	A0A1C9LWS4	Streptomyces_phage	32.4	1.6e-118
WP_003900036.1|3784633_3785974_+	wax ester/triacylglycerol synthase family O-acyltransferase	NA	NA	NA	NA	NA
WP_003417892.1|3786015_3787191_+	trehalose-phosphatase	NA	NA	NA	NA	NA
WP_003417895.1|3787244_3787349_+	PE family protein	NA	NA	NA	NA	NA
WP_003900037.1|3787427_3788069_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003417897.1|3788069_3788318_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_003417900.1|3788322_3789750_+	amidase	NA	NA	NA	NA	NA
WP_003417903.1|3789857_3790511_+	HAD family phosphatase	NA	NA	NA	NA	NA
WP_003417905.1|3790549_3792055_-	type B diterpene cyclase	NA	NA	NA	NA	NA
WP_003417908.1|3792059_3792950_-	diterpene synthase	NA	NA	NA	NA	NA
WP_003417910.1|3792958_3794569_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
WP_075155233.1|3794513_3794759_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
WP_087902221.1|3794801_3796063_-|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
