The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP023589	Mycobacterium tuberculosis strain TBV5000 chromosome, complete genome	4411318	2940980	2976346	4411318	transposase,capsid,integrase,protease,tRNA,terminase,head	Tupanvirus(11.11%)	41	2969781:2969808	2980763:2980790
WP_003413486.1|2940980_2943059_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	34.9	2.5e-104
WP_003413487.1|2943167_2943395_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009938541.1|2943391_2944777_-	PE family protein	NA	NA	NA	NA	NA
WP_003413569.1|2945121_2945622_+	DUF1990 family protein	NA	NA	NA	NA	NA
WP_003413574.1|2945638_2946079_-	DoxX family membrane protein	NA	NA	NA	NA	NA
WP_003901437.1|2946225_2946903_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_003413583.1|2946887_2947241_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_003413586.1|2947253_2947679_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003413588.1|2947675_2948350_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003413589.1|2948427_2949249_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_003413592.1|2949384_2950278_+	universal stress protein	NA	NA	NA	NA	NA
WP_003413594.1|2950280_2951099_-	universal stress protein	NA	NA	NA	NA	NA
WP_003899401.1|2951113_2952295_-|protease	site-2 protease family protein	protease	NA	NA	NA	NA
WP_003413598.1|2952353_2952785_-	CBS domain-containing protein	NA	A0A2I6B2H4	Macacine_betaherpesvirus	100.0	1.9e-75
WP_003899402.1|2953298_2954540_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003899403.1|2954849_2955212_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413610.1|2955558_2956683_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413614.1|2956684_2957224_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413616.1|2957363_2958662_+	RNA-splicing ligase RtcB	NA	A2RQD0	Archaeal_BJ1_virus	43.3	3.8e-90
WP_003413619.1|2958700_2958982_-	DUF1876 domain-containing protein	NA	NA	NA	NA	NA
WP_003413625.1|2959126_2959612_-	hemerythrin domain-containing protein	NA	NA	NA	NA	NA
WP_003902325.1|2959638_2959896_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009938544.1|2959896_2962233_-	PE family protein	NA	NA	NA	NA	NA
WP_003899405.1|2962261_2962504_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003899406.1|2962504_2963182_+	membrane protein	NA	NA	NA	NA	NA
WP_003413654.1|2963377_2964034_+	DedA family protein	NA	NA	NA	NA	NA
WP_003413657.1|2964196_2964643_+	anti-sigma factor antagonist	NA	NA	NA	NA	NA
WP_003413663.1|2964817_2965150_-	YnfA family protein	NA	NA	NA	NA	NA
WP_003413665.1|2965269_2965629_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003413675.1|2965730_2966189_+	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_003899407.1|2966324_2966705_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003413686.1|2966701_2968198_+	ACR3 family arsenite efflux transporter	NA	A0A2H4PQT9	Staphylococcus_phage	39.7	5.1e-14
WP_085972563.1|2968387_2968624_+	antitoxin MazE family protein	NA	NA	NA	NA	NA
WP_077365235.1|2968696_2968870_+	hypothetical protein	NA	NA	NA	NA	NA
2969781:2969808	attL	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
WP_003899409.1|2969914_2970346_+	hypothetical protein	NA	NA	NA	NA	NA
WP_072492633.1|2970342_2971341_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2D1G8E2	Mycobacterium_phage	47.5	1.1e-60
WP_003900539.1|2971354_2971819_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_087902221.1|2971951_2973212_+|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
WP_003899411.1|2973586_2975026_-|capsid	phage major capsid protein	capsid	A0A1B3AYS4	Gordonia_phage	40.6	1.4e-66
WP_003899412.1|2975033_2975567_-|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	32.9	3.1e-06
WP_003899413.1|2975719_2976346_-|terminase	phage terminase small subunit P27 family	terminase	V9H0V4	Actinophage	47.2	1.6e-17
2980763:2980790	attR	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
>prophage 2
NZ_CP023589	Mycobacterium tuberculosis strain TBV5000 chromosome, complete genome	4411318	3710217	3796128	4411318	tRNA,transposase	Burkholderia_virus(28.57%)	57	NA	NA
WP_087902221.1|3710217_3711478_+|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
WP_009937401.1|3711533_3711695_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_003902445.1|3711716_3713246_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_003417413.1|3713178_3714117_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_003902446.1|3714125_3715493_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	25.8	9.0e-18
WP_003417415.1|3715561_3716779_+	D-alanyl-D-alanine carboxypeptidase	NA	A0A1P8VVG5	Erythrobacter_phage	27.3	8.0e-10
WP_003417416.1|3716874_3718383_+	sugar porter family MFS transporter	NA	NA	NA	NA	NA
WP_003417418.1|3718379_3719531_+	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA	NA
WP_003417421.1|3719721_3720567_-	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_003900026.1|3721041_3721482_+	heavy metal-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003417435.1|3721515_3722385_-	inner membrane protein YhjD	NA	NA	NA	NA	NA
WP_003417440.1|3722405_3723416_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_009940431.1|3723700_3724333_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_003417452.1|3724399_3725629_-	NADP-dependent isocitrate dehydrogenase	NA	NA	NA	NA	NA
WP_003900028.1|3725911_3727261_+	bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase	NA	A0A0B5JD48	Pandoravirus	26.5	2.5e-12
WP_003417458.1|3727272_3728412_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003417461.1|3728408_3729140_+	methyltransferase	NA	NA	NA	NA	NA
WP_096865691.1|3729148_3736720_-	PPE family protein	NA	NA	NA	NA	NA
WP_003417619.1|3742964_3743222_-	DUF3017 domain-containing protein	NA	NA	NA	NA	NA
WP_009938649.1|3743477_3752951_-	PPE family protein	NA	NA	NA	NA	NA
WP_049961743.1|3753576_3754023_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_003900675.1|3754059_3754800_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_009938650.1|3755094_3755382_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009939158.1|3755718_3766869_-	PPE family protein	NA	NA	NA	NA	NA
WP_003417738.1|3767112_3767907_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417739.1|3767988_3768360_-	FAD-binding oxidoreductase	NA	A0A0B5JBT9	Pandoravirus	56.4	3.3e-15
WP_157132559.1|3768257_3768476_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417741.1|3768502_3768763_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417745.1|3768877_3769267_+	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_003417749.1|3769280_3769574_-	DUF3017 domain-containing protein	NA	NA	NA	NA	NA
WP_003417751.1|3769570_3770416_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	NA	NA	NA	NA
WP_003417757.1|3770539_3770815_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_003417760.1|3770811_3771069_+	Txe/YoeB family addiction module toxin	NA	NA	NA	NA	NA
WP_003900033.1|3771110_3772301_+	NADH:flavin oxidoreductase	NA	NA	NA	NA	NA
WP_003417765.1|3772417_3772786_+	FHA domain-containing protein	NA	NA	NA	NA	NA
WP_003417767.1|3772782_3773334_-	pentapeptide repeat protein MfpA	NA	NA	NA	NA	NA
WP_003417769.1|3773340_3773922_-	ATP/GTP-binding protein	NA	NA	NA	NA	NA
WP_003417772.1|3773902_3774271_-	DUF742 domain-containing protein	NA	NA	NA	NA	NA
WP_003417776.1|3774248_3774641_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003907034.1|3774637_3777268_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_003417878.1|3777503_3777968_+|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	tRNA	NA	NA	NA	NA
WP_010886167.1|3778334_3780101_+	PE family protein	NA	NA	NA	NA	NA
WP_003417881.1|3780101_3780746_-	nitroreductase family protein	NA	NA	NA	NA	NA
WP_003417882.1|3780744_3781179_+	TIGR03667 family PPOX class F420-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003908228.1|3781267_3784507_-	error-prone DNA polymerase	NA	A0A1C9LWS4	Streptomyces_phage	32.4	1.6e-118
WP_003900036.1|3784698_3786039_+	wax ester/triacylglycerol synthase family O-acyltransferase	NA	NA	NA	NA	NA
WP_003417892.1|3786080_3787256_+	trehalose-phosphatase	NA	NA	NA	NA	NA
WP_003417895.1|3787309_3787414_+	PE family protein	NA	NA	NA	NA	NA
WP_003900037.1|3787492_3788134_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003417897.1|3788134_3788383_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_003417900.1|3788387_3789815_+	amidase	NA	NA	NA	NA	NA
WP_003417903.1|3789922_3790576_+	HAD family phosphatase	NA	NA	NA	NA	NA
WP_003417905.1|3790614_3792120_-	type B diterpene cyclase	NA	NA	NA	NA	NA
WP_003417908.1|3792124_3793015_-	diterpene synthase	NA	NA	NA	NA	NA
WP_003417910.1|3793023_3794634_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
WP_075155233.1|3794578_3794824_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
WP_087902221.1|3794866_3796128_-|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
