The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP023606	Mycobacterium tuberculosis strain LE103 chromosome, complete genome	4411243	2941032	2976398	4411243	tRNA,head,integrase,capsid,transposase,terminase,protease	Tupanvirus(11.11%)	41	2969833:2969860	2980815:2980842
WP_003413486.1|2941032_2943111_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	34.9	2.5e-104
WP_003413487.1|2943219_2943447_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009938541.1|2943443_2944829_-	PE family protein	NA	NA	NA	NA	NA
WP_003413569.1|2945173_2945674_+	DUF1990 family protein	NA	NA	NA	NA	NA
WP_003413574.1|2945690_2946131_-	DoxX family membrane protein	NA	NA	NA	NA	NA
WP_003901437.1|2946277_2946955_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_003413583.1|2946939_2947293_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_003413586.1|2947305_2947731_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003413588.1|2947727_2948402_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003413589.1|2948479_2949301_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_003413592.1|2949436_2950330_+	universal stress protein	NA	NA	NA	NA	NA
WP_003413594.1|2950332_2951151_-	universal stress protein	NA	NA	NA	NA	NA
WP_003899401.1|2951165_2952347_-|protease	site-2 protease family protein	protease	NA	NA	NA	NA
WP_003413598.1|2952405_2952837_-	CBS domain-containing protein	NA	A0A2I6B2H4	Macacine_betaherpesvirus	100.0	1.9e-75
WP_003899402.1|2953350_2954592_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003899403.1|2954901_2955264_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413610.1|2955610_2956735_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413614.1|2956736_2957276_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413616.1|2957415_2958714_+	RNA-splicing ligase RtcB	NA	A2RQD0	Archaeal_BJ1_virus	43.3	3.8e-90
WP_003413619.1|2958752_2959034_-	DUF1876 domain-containing protein	NA	NA	NA	NA	NA
WP_003413625.1|2959178_2959664_-	hemerythrin domain-containing protein	NA	NA	NA	NA	NA
WP_003902325.1|2959690_2959948_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009938544.1|2959948_2962285_-	PE family protein	NA	NA	NA	NA	NA
WP_003899405.1|2962313_2962556_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003899406.1|2962556_2963234_+	membrane protein	NA	NA	NA	NA	NA
WP_012054325.1|2963429_2964086_+	DedA family protein	NA	NA	NA	NA	NA
WP_003413657.1|2964248_2964695_+	anti-sigma factor antagonist	NA	NA	NA	NA	NA
WP_003413663.1|2964869_2965202_-	YnfA family protein	NA	NA	NA	NA	NA
WP_003413665.1|2965321_2965681_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003413675.1|2965782_2966241_+	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_003899407.1|2966376_2966757_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003413686.1|2966753_2968250_+	ACR3 family arsenite efflux transporter	NA	A0A2H4PQT9	Staphylococcus_phage	39.7	5.1e-14
WP_085972563.1|2968439_2968676_+	antitoxin MazE family protein	NA	NA	NA	NA	NA
WP_077365235.1|2968748_2968922_+	hypothetical protein	NA	NA	NA	NA	NA
2969833:2969860	attL	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
WP_003899409.1|2969966_2970398_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003900538.1|2970394_2971393_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2D1G8E2	Mycobacterium_phage	47.8	7.4e-62
WP_003900539.1|2971406_2971871_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_087902221.1|2972003_2973264_+|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
WP_003899411.1|2973638_2975078_-|capsid	phage major capsid protein	capsid	A0A1B3AYS4	Gordonia_phage	40.6	1.4e-66
WP_003899412.1|2975085_2975619_-|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	32.9	3.1e-06
WP_072464513.1|2975771_2976398_-|terminase	phage terminase small subunit P27 family	terminase	V9H0V4	Actinophage	47.2	1.6e-17
2980815:2980842	attR	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
>prophage 2
NZ_CP023606	Mycobacterium tuberculosis strain LE103 chromosome, complete genome	4411243	3710216	3796106	4411243	transposase,tRNA	Burkholderia_virus(28.57%)	57	NA	NA
WP_087902221.1|3710216_3711477_+|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
WP_009937401.1|3711532_3711694_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_003902445.1|3711715_3713245_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_003417413.1|3713177_3714116_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_003902446.1|3714124_3715492_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	25.8	9.0e-18
WP_003417415.1|3715560_3716778_+	D-alanyl-D-alanine carboxypeptidase	NA	A0A1P8VVG5	Erythrobacter_phage	27.3	8.0e-10
WP_003417416.1|3716873_3718382_+	sugar porter family MFS transporter	NA	NA	NA	NA	NA
WP_003417418.1|3718378_3719530_+	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA	NA
WP_003417421.1|3719720_3720566_-	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_003900026.1|3721040_3721481_+	heavy metal-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003417435.1|3721514_3722384_-	inner membrane protein YhjD	NA	NA	NA	NA	NA
WP_003417440.1|3722404_3723415_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_009940431.1|3723699_3724332_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_003417452.1|3724398_3725628_-	NADP-dependent isocitrate dehydrogenase	NA	NA	NA	NA	NA
WP_003900028.1|3725910_3727260_+	bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase	NA	A0A0B5JD48	Pandoravirus	26.5	2.5e-12
WP_003417458.1|3727271_3728411_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003417461.1|3728407_3729139_+	methyltransferase	NA	NA	NA	NA	NA
WP_023637497.1|3729147_3736719_-	PPE family protein	NA	NA	NA	NA	NA
WP_003417619.1|3742972_3743230_-	DUF3017 domain-containing protein	NA	NA	NA	NA	NA
WP_009938649.1|3743485_3752959_-	PPE family protein	NA	NA	NA	NA	NA
WP_049961743.1|3753584_3754031_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_003900675.1|3754067_3754808_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_009938650.1|3755102_3755390_-	hypothetical protein	NA	NA	NA	NA	NA
WP_096878190.1|3755726_3766847_-	PPE family protein	NA	NA	NA	NA	NA
WP_003417738.1|3767090_3767885_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417739.1|3767966_3768338_-	FAD-binding oxidoreductase	NA	A0A0B5JBT9	Pandoravirus	56.4	3.3e-15
WP_157132559.1|3768235_3768454_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417741.1|3768480_3768741_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417745.1|3768855_3769245_+	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_003417749.1|3769258_3769552_-	DUF3017 domain-containing protein	NA	NA	NA	NA	NA
WP_003417751.1|3769548_3770394_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	NA	NA	NA	NA
WP_003417757.1|3770517_3770793_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_003417760.1|3770789_3771047_+	Txe/YoeB family addiction module toxin	NA	NA	NA	NA	NA
WP_012054356.1|3771088_3772279_+	NADH:flavin oxidoreductase	NA	NA	NA	NA	NA
WP_003417765.1|3772395_3772764_+	FHA domain-containing protein	NA	NA	NA	NA	NA
WP_003417767.1|3772760_3773312_-	pentapeptide repeat protein MfpA	NA	NA	NA	NA	NA
WP_003417769.1|3773318_3773900_-	ATP/GTP-binding protein	NA	NA	NA	NA	NA
WP_003417772.1|3773880_3774249_-	DUF742 domain-containing protein	NA	NA	NA	NA	NA
WP_003417776.1|3774226_3774619_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003907034.1|3774615_3777246_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_003417878.1|3777481_3777946_+|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	tRNA	NA	NA	NA	NA
WP_010886167.1|3778312_3780079_+	PE family protein	NA	NA	NA	NA	NA
WP_003417881.1|3780079_3780724_-	nitroreductase family protein	NA	NA	NA	NA	NA
WP_003417882.1|3780722_3781157_+	TIGR03667 family PPOX class F420-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003908228.1|3781245_3784485_-	error-prone DNA polymerase	NA	A0A1C9LWS4	Streptomyces_phage	32.4	1.6e-118
WP_003900036.1|3784676_3786017_+	wax ester/triacylglycerol synthase family O-acyltransferase	NA	NA	NA	NA	NA
WP_003417892.1|3786058_3787234_+	trehalose-phosphatase	NA	NA	NA	NA	NA
WP_003417895.1|3787287_3787392_+	PE family protein	NA	NA	NA	NA	NA
WP_003900037.1|3787470_3788112_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003417897.1|3788112_3788361_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_012054357.1|3788365_3789793_+	amidase	NA	NA	NA	NA	NA
WP_003417903.1|3789900_3790554_+	HAD family phosphatase	NA	NA	NA	NA	NA
WP_003417905.1|3790592_3792098_-	type B diterpene cyclase	NA	NA	NA	NA	NA
WP_003417908.1|3792102_3792993_-	diterpene synthase	NA	NA	NA	NA	NA
WP_003417910.1|3793001_3794612_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
WP_075155233.1|3794556_3794802_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
WP_087902221.1|3794844_3796106_-|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
