The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP023614	Mycobacterium tuberculosis strain LN3588 chromosome, complete genome	4411379	2941051	2976417	4411379	tRNA,integrase,capsid,protease,terminase,transposase,head	Tupanvirus(11.11%)	41	2969852:2969879	2980834:2980861
WP_003413486.1|2941051_2943130_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	34.9	2.5e-104
WP_003413487.1|2943238_2943466_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009938541.1|2943462_2944848_-	PE family protein	NA	NA	NA	NA	NA
WP_003413569.1|2945192_2945693_+	DUF1990 family protein	NA	NA	NA	NA	NA
WP_003413574.1|2945709_2946150_-	DoxX family membrane protein	NA	NA	NA	NA	NA
WP_003901437.1|2946296_2946974_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_003413583.1|2946958_2947312_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_003413586.1|2947324_2947750_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003413588.1|2947746_2948421_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003413589.1|2948498_2949320_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_003413592.1|2949455_2950349_+	universal stress protein	NA	NA	NA	NA	NA
WP_003413594.1|2950351_2951170_-	universal stress protein	NA	NA	NA	NA	NA
WP_003899401.1|2951184_2952366_-|protease	site-2 protease family protein	protease	NA	NA	NA	NA
WP_003413598.1|2952424_2952856_-	CBS domain-containing protein	NA	A0A2I6B2H4	Macacine_betaherpesvirus	100.0	1.9e-75
WP_003899402.1|2953369_2954611_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003899403.1|2954920_2955283_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413610.1|2955629_2956754_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413614.1|2956755_2957295_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413616.1|2957434_2958733_+	RtcB family protein	NA	A2RQD0	Archaeal_BJ1_virus	43.3	3.8e-90
WP_003413619.1|2958771_2959053_-	DUF1876 domain-containing protein	NA	NA	NA	NA	NA
WP_003413625.1|2959197_2959683_-	hemerythrin domain-containing protein	NA	NA	NA	NA	NA
WP_003902325.1|2959709_2959967_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009938544.1|2959967_2962304_-	PE family protein	NA	NA	NA	NA	NA
WP_003899405.1|2962332_2962575_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003899406.1|2962575_2963253_+	membrane protein	NA	NA	NA	NA	NA
WP_003413654.1|2963448_2964105_+	DedA family protein	NA	NA	NA	NA	NA
WP_003413657.1|2964267_2964714_+	anti-sigma factor antagonist	NA	NA	NA	NA	NA
WP_003413663.1|2964888_2965221_-	YnfA family protein	NA	NA	NA	NA	NA
WP_003413665.1|2965340_2965700_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003413675.1|2965801_2966260_+	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_003899407.1|2966395_2966776_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003413686.1|2966772_2968269_+	ACR3 family arsenite efflux transporter	NA	A0A2H4PQT9	Staphylococcus_phage	39.7	5.1e-14
WP_085972563.1|2968458_2968695_+	antitoxin MazE family protein	NA	NA	NA	NA	NA
WP_077365235.1|2968767_2968941_+	hypothetical protein	NA	NA	NA	NA	NA
2969852:2969879	attL	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
WP_003899409.1|2969985_2970417_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003900538.1|2970413_2971412_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2D1G8E2	Mycobacterium_phage	47.8	7.4e-62
WP_003900539.1|2971425_2971890_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_087902221.1|2972022_2973283_+|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
WP_003899411.1|2973657_2975097_-|capsid	phage major capsid protein	capsid	A0A1B3AYS4	Gordonia_phage	40.6	1.4e-66
WP_003899412.1|2975104_2975638_-|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	32.9	3.1e-06
WP_003899413.1|2975790_2976417_-|terminase	phage terminase small subunit P27 family	terminase	V9H0V4	Actinophage	47.2	1.6e-17
2980834:2980861	attR	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
>prophage 2
NZ_CP023614	Mycobacterium tuberculosis strain LN3588 chromosome, complete genome	4411379	3710283	3796212	4411379	tRNA,transposase	Burkholderia_virus(28.57%)	57	NA	NA
WP_087902221.1|3710283_3711544_+|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
WP_009937401.1|3711599_3711761_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_003902445.1|3711782_3713312_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_003417413.1|3713244_3714183_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_003902446.1|3714191_3715559_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	25.8	9.0e-18
WP_003417415.1|3715627_3716845_+	D-alanyl-D-alanine carboxypeptidase DacB1	NA	A0A1P8VVG5	Erythrobacter_phage	27.3	8.0e-10
WP_003417416.1|3716940_3718449_+	sugar porter family MFS transporter	NA	NA	NA	NA	NA
WP_003417418.1|3718445_3719597_+	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA	NA
WP_003417421.1|3719787_3720633_-	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_003900026.1|3721107_3721548_+	heavy metal-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003417435.1|3721581_3722451_-	inner membrane protein YhjD	NA	NA	NA	NA	NA
WP_003417440.1|3722471_3723482_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_009940431.1|3723766_3724399_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_003417452.1|3724465_3725695_-	NADP-dependent isocitrate dehydrogenase	NA	NA	NA	NA	NA
WP_003900028.1|3725977_3727327_+	bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase	NA	A0A0B5JD48	Pandoravirus	26.5	2.5e-12
WP_003417458.1|3727338_3728478_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003417461.1|3728474_3729206_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_096865295.1|3729214_3736786_-	PPE family protein	NA	NA	NA	NA	NA
WP_003417619.1|3743048_3743306_-	DUF3017 domain-containing protein	NA	NA	NA	NA	NA
WP_009938649.1|3743561_3753035_-	PPE family protein	NA	NA	NA	NA	NA
WP_049961743.1|3753660_3754107_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_003900675.1|3754143_3754884_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_009938650.1|3755178_3755466_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009939158.1|3755802_3766953_-	PPE family protein	NA	NA	NA	NA	NA
WP_003417738.1|3767196_3767991_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417739.1|3768072_3768444_-	FAD-binding oxidoreductase	NA	A0A0B5JBT9	Pandoravirus	56.4	3.3e-15
WP_157132559.1|3768341_3768560_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417741.1|3768586_3768847_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417745.1|3768961_3769351_+	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_003417749.1|3769364_3769658_-	DUF3017 domain-containing protein	NA	NA	NA	NA	NA
WP_003417751.1|3769654_3770500_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	NA	NA	NA	NA
WP_003417757.1|3770623_3770899_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_003417760.1|3770895_3771153_+	Txe/YoeB family addiction module toxin	NA	NA	NA	NA	NA
WP_003900033.1|3771194_3772385_+	NADH:flavin oxidoreductase	NA	NA	NA	NA	NA
WP_003417765.1|3772501_3772870_+	FHA domain-containing protein	NA	NA	NA	NA	NA
WP_003417767.1|3772866_3773418_-	pentapeptide repeat protein MfpA	NA	NA	NA	NA	NA
WP_003417769.1|3773424_3774006_-	ATP/GTP-binding protein	NA	NA	NA	NA	NA
WP_003417772.1|3773986_3774355_-	DUF742 domain-containing protein	NA	NA	NA	NA	NA
WP_003417776.1|3774332_3774725_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003907034.1|3774721_3777352_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_003417878.1|3777587_3778052_+|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	tRNA	NA	NA	NA	NA
WP_010886167.1|3778418_3780185_+	PE family protein	NA	NA	NA	NA	NA
WP_003417881.1|3780185_3780830_-	nitroreductase family protein	NA	NA	NA	NA	NA
WP_003417882.1|3780828_3781263_+	TIGR03667 family PPOX class F420-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003908228.1|3781351_3784591_-	error-prone DNA polymerase DnaE2	NA	A0A1C9LWS4	Streptomyces_phage	32.4	1.6e-118
WP_003900036.1|3784782_3786123_+	wax ester/triacylglycerol synthase family O-acyltransferase	NA	NA	NA	NA	NA
WP_003417892.1|3786164_3787340_+	trehalose-phosphatase	NA	NA	NA	NA	NA
WP_003417895.1|3787393_3787498_+	PE family protein	NA	NA	NA	NA	NA
WP_003900037.1|3787576_3788218_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003417897.1|3788218_3788467_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_003417900.1|3788471_3789899_+	amidase	NA	NA	NA	NA	NA
WP_003417903.1|3790006_3790660_+	HAD family phosphatase	NA	NA	NA	NA	NA
WP_003417905.1|3790698_3792204_-	type B diterpene cyclase	NA	NA	NA	NA	NA
WP_003417908.1|3792208_3793099_-	diterpene synthase	NA	NA	NA	NA	NA
WP_003417910.1|3793107_3794718_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
WP_075155233.1|3794662_3794908_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
WP_087902221.1|3794950_3796212_-|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
