The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP023638	Mycobacterium tuberculosis strain TBV4766 chromosome, complete genome	4411310	2940973	2976339	4411310	integrase,transposase,capsid,protease,head,tRNA,terminase	Tupanvirus(11.11%)	41	2969774:2969801	2980756:2980783
WP_003413486.1|2940973_2943052_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	34.9	2.5e-104
WP_003413487.1|2943160_2943388_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009938541.1|2943384_2944770_-	PE family protein	NA	NA	NA	NA	NA
WP_003413569.1|2945114_2945615_+	DUF1990 family protein	NA	NA	NA	NA	NA
WP_003413574.1|2945631_2946072_-	DoxX family membrane protein	NA	NA	NA	NA	NA
WP_003901437.1|2946218_2946896_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_003413583.1|2946880_2947234_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_003413586.1|2947246_2947672_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003413588.1|2947668_2948343_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003413589.1|2948420_2949242_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_003413592.1|2949377_2950271_+	universal stress protein	NA	NA	NA	NA	NA
WP_003413594.1|2950273_2951092_-	universal stress protein	NA	NA	NA	NA	NA
WP_003899401.1|2951106_2952288_-|protease	site-2 protease family protein	protease	NA	NA	NA	NA
WP_003413598.1|2952346_2952778_-	CBS domain-containing protein	NA	A0A2I6B2H4	Macacine_betaherpesvirus	100.0	1.9e-75
WP_003899402.1|2953291_2954533_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003899403.1|2954842_2955205_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413610.1|2955551_2956676_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413614.1|2956677_2957217_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413616.1|2957356_2958655_+	RNA-splicing ligase RtcB	NA	A2RQD0	Archaeal_BJ1_virus	43.3	3.8e-90
WP_003413619.1|2958693_2958975_-	DUF1876 domain-containing protein	NA	NA	NA	NA	NA
WP_003413625.1|2959119_2959605_-	hemerythrin domain-containing protein	NA	NA	NA	NA	NA
WP_003902325.1|2959631_2959889_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009938544.1|2959889_2962226_-	PE family protein	NA	NA	NA	NA	NA
WP_003899405.1|2962254_2962497_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003899406.1|2962497_2963175_+	membrane protein	NA	NA	NA	NA	NA
WP_003413654.1|2963370_2964027_+	DedA family protein	NA	NA	NA	NA	NA
WP_003413657.1|2964189_2964636_+	anti-sigma factor antagonist	NA	NA	NA	NA	NA
WP_003413663.1|2964810_2965143_-	YnfA family protein	NA	NA	NA	NA	NA
WP_003413665.1|2965262_2965622_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003413675.1|2965723_2966182_+	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_003899407.1|2966317_2966698_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003413686.1|2966694_2968191_+	ACR3 family arsenite efflux transporter	NA	A0A2H4PQT9	Staphylococcus_phage	39.7	5.1e-14
WP_085972563.1|2968380_2968617_+	antitoxin MazE family protein	NA	NA	NA	NA	NA
WP_077365235.1|2968689_2968863_+	hypothetical protein	NA	NA	NA	NA	NA
2969774:2969801	attL	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
WP_003899409.1|2969907_2970339_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003900538.1|2970335_2971334_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2D1G8E2	Mycobacterium_phage	47.8	7.4e-62
WP_003900539.1|2971347_2971812_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_087902221.1|2971944_2973205_+|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
WP_003899411.1|2973579_2975019_-|capsid	phage major capsid protein	capsid	A0A1B3AYS4	Gordonia_phage	40.6	1.4e-66
WP_003899412.1|2975026_2975560_-|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	32.9	3.1e-06
WP_003899413.1|2975712_2976339_-|terminase	phage terminase small subunit P27 family	terminase	V9H0V4	Actinophage	47.2	1.6e-17
2980756:2980783	attR	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
>prophage 2
NZ_CP023638	Mycobacterium tuberculosis strain TBV4766 chromosome, complete genome	4411310	3710204	3796133	4411310	transposase,tRNA	Burkholderia_virus(28.57%)	57	NA	NA
WP_087902221.1|3710204_3711465_+|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
WP_009937401.1|3711520_3711682_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_003902445.1|3711703_3713233_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_003417413.1|3713165_3714104_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_003902446.1|3714112_3715480_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	25.8	9.0e-18
WP_003417415.1|3715548_3716766_+	D-alanyl-D-alanine carboxypeptidase	NA	A0A1P8VVG5	Erythrobacter_phage	27.3	8.0e-10
WP_003417416.1|3716861_3718370_+	sugar porter family MFS transporter	NA	NA	NA	NA	NA
WP_003417418.1|3718366_3719518_+	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA	NA
WP_003417421.1|3719708_3720554_-	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_003900026.1|3721028_3721469_+	heavy metal-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003417435.1|3721502_3722372_-	inner membrane protein YhjD	NA	NA	NA	NA	NA
WP_003417440.1|3722392_3723403_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_009940431.1|3723687_3724320_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_003417452.1|3724386_3725616_-	NADP-dependent isocitrate dehydrogenase	NA	NA	NA	NA	NA
WP_003900028.1|3725898_3727248_+	bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase	NA	A0A0B5JD48	Pandoravirus	26.5	2.5e-12
WP_003417458.1|3727259_3728399_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003417461.1|3728395_3729127_+	methyltransferase	NA	NA	NA	NA	NA
WP_096863751.1|3729135_3736707_-	PPE family protein	NA	NA	NA	NA	NA
WP_003417619.1|3742969_3743227_-	DUF3017 domain-containing protein	NA	NA	NA	NA	NA
WP_009938649.1|3743482_3752956_-	PPE family protein	NA	NA	NA	NA	NA
WP_049961743.1|3753581_3754028_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_003900675.1|3754064_3754805_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_009938650.1|3755099_3755387_-	hypothetical protein	NA	NA	NA	NA	NA
WP_096866367.1|3755723_3766874_-	PPE family protein	NA	NA	NA	NA	NA
WP_003417738.1|3767117_3767912_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417739.1|3767993_3768365_-	FAD-binding oxidoreductase	NA	A0A0B5JBT9	Pandoravirus	56.4	3.3e-15
WP_157132559.1|3768262_3768481_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417741.1|3768507_3768768_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417745.1|3768882_3769272_+	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_003417749.1|3769285_3769579_-	DUF3017 domain-containing protein	NA	NA	NA	NA	NA
WP_003417751.1|3769575_3770421_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	NA	NA	NA	NA
WP_003417757.1|3770544_3770820_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_003417760.1|3770816_3771074_+	Txe/YoeB family addiction module toxin	NA	NA	NA	NA	NA
WP_003900033.1|3771115_3772306_+	NADH:flavin oxidoreductase	NA	NA	NA	NA	NA
WP_003417765.1|3772422_3772791_+	FHA domain-containing protein	NA	NA	NA	NA	NA
WP_003417767.1|3772787_3773339_-	pentapeptide repeat protein MfpA	NA	NA	NA	NA	NA
WP_003417769.1|3773345_3773927_-	ATP/GTP-binding protein	NA	NA	NA	NA	NA
WP_003417772.1|3773907_3774276_-	DUF742 domain-containing protein	NA	NA	NA	NA	NA
WP_003417776.1|3774253_3774646_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003907034.1|3774642_3777273_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_003417878.1|3777508_3777973_+|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	tRNA	NA	NA	NA	NA
WP_010886167.1|3778339_3780106_+	PE family protein	NA	NA	NA	NA	NA
WP_003417881.1|3780106_3780751_-	nitroreductase family protein	NA	NA	NA	NA	NA
WP_003417882.1|3780749_3781184_+	TIGR03667 family PPOX class F420-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003908228.1|3781272_3784512_-	error-prone DNA polymerase	NA	A0A1C9LWS4	Streptomyces_phage	32.4	1.6e-118
WP_003900036.1|3784703_3786044_+	wax ester/triacylglycerol synthase family O-acyltransferase	NA	NA	NA	NA	NA
WP_003417892.1|3786085_3787261_+	trehalose-phosphatase	NA	NA	NA	NA	NA
WP_003417895.1|3787314_3787419_+	PE family protein	NA	NA	NA	NA	NA
WP_003900037.1|3787497_3788139_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003417897.1|3788139_3788388_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_003417900.1|3788392_3789820_+	amidase	NA	NA	NA	NA	NA
WP_003417903.1|3789927_3790581_+	HAD family phosphatase	NA	NA	NA	NA	NA
WP_003417905.1|3790619_3792125_-	type B diterpene cyclase	NA	NA	NA	NA	NA
WP_003417908.1|3792129_3793020_-	diterpene synthase	NA	NA	NA	NA	NA
WP_003417910.1|3793028_3794639_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
WP_075155233.1|3794583_3794829_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
WP_087902221.1|3794871_3796133_-|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
