assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002448175.1_ASM244817v1	NZ_CP023638	Mycobacterium tuberculosis strain TBV4766 chromosome, complete genome	1	333627-334659	1,1	CRT,PILER-CR	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGGNGCCGCCGGNN,CCCGCCGGCCCCGCCG	18,16	0	0	NA	NA	NA:NA	15,4	15	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|61aa|up_0|NZ_CP023638.1_333142_333325_-,NA	NA|398aa|up_9|NZ_CP023638.1_323320_324514_-	COG3285, COG3285, Predicted eukaryotic-type DNA primase [DNA replication, recombination, and repair]	NA|561aa|up_8|NZ_CP023638.1_324549_326232_+	PRK07788, PRK07788, acyl-CoA synthetase; Validated	NA|732aa|up_7|NZ_CP023638.1_326248_328444_-	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|378aa|up_6|NZ_CP023638.1_328557_329691_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|207aa|up_5|NZ_CP023638.1_329687_330308_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|194aa|up_4|NZ_CP023638.1_330404_330986_+	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|242aa|up_3|NZ_CP023638.1_330915_331641_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|307aa|up_2|NZ_CP023638.1_331730_332651_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	NA|143aa|up_1|NZ_CP023638.1_332690_333119_-	cd18678, PIN_MtVapC25_VapC33-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC25, VapC33, and related proteins	NA|61aa|up_0|NZ_CP023638.1_333142_333325_-	NA	NA|838aa|down_0|NZ_CP023638.1_336524_339038_-	pfam00934, PE, PE family	NA|537aa|down_1|NZ_CP023638.1_339328_340939_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|303aa|down_2|NZ_CP023638.1_340962_341871_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|632aa|down_3|NZ_CP023638.1_342094_343990_+	TIGR03922, T7SS_EccA, type VII secretion AAA-ATPase EccA	NA|539aa|down_4|NZ_CP023638.1_343986_345603_+	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|1331aa|down_5|NZ_CP023638.1_345599_349592_+	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|103aa|down_6|NZ_CP023638.1_349588_349897_+	pfam00934, PE, PE family	NA|514aa|down_7|NZ_CP023638.1_349899_351441_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|98aa|down_8|NZ_CP023638.1_351489_351783_+	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target	NA|97aa|down_9|NZ_CP023638.1_351812_352103_+	COG4842, COG4842, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_002448175.1_ASM244817v1	NZ_CP023638	Mycobacterium tuberculosis strain TBV4766 chromosome, complete genome	2	338069-338291	2	PILER-CR	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	ATCCGCCGCTACCGCCGGTGCCGCCGGCGCCGAACAGCCCGCC	43	0	0	NA	NA	NA	2	2	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|61aa|up_1|NZ_CP023638.1_333142_333325_-,NA	NA|561aa|up_9|NZ_CP023638.1_324549_326232_+	PRK07788, PRK07788, acyl-CoA synthetase; Validated	NA|732aa|up_8|NZ_CP023638.1_326248_328444_-	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|378aa|up_7|NZ_CP023638.1_328557_329691_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|207aa|up_6|NZ_CP023638.1_329687_330308_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|194aa|up_5|NZ_CP023638.1_330404_330986_+	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|242aa|up_4|NZ_CP023638.1_330915_331641_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|307aa|up_3|NZ_CP023638.1_331730_332651_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	NA|143aa|up_2|NZ_CP023638.1_332690_333119_-	cd18678, PIN_MtVapC25_VapC33-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC25, VapC33, and related proteins	NA|61aa|up_1|NZ_CP023638.1_333142_333325_-	NA	NA|615aa|up_0|NZ_CP023638.1_333419_335264_-	PRK13875, PRK13875, conjugal transfer protein TrbL; Provisional	NA|537aa|down_0|NZ_CP023638.1_339328_340939_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|303aa|down_1|NZ_CP023638.1_340962_341871_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|632aa|down_2|NZ_CP023638.1_342094_343990_+	TIGR03922, T7SS_EccA, type VII secretion AAA-ATPase EccA	NA|539aa|down_3|NZ_CP023638.1_343986_345603_+	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|1331aa|down_4|NZ_CP023638.1_345599_349592_+	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|103aa|down_5|NZ_CP023638.1_349588_349897_+	pfam00934, PE, PE family	NA|514aa|down_6|NZ_CP023638.1_349899_351441_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|98aa|down_7|NZ_CP023638.1_351489_351783_+	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target	NA|97aa|down_8|NZ_CP023638.1_351812_352103_+	COG4842, COG4842, Uncharacterized protein conserved in bacteria [Function unknown]	NA|296aa|down_9|NZ_CP023638.1_352113_353001_+	pfam14011, ESX-1_EspG, EspG family
GCF_002448175.1_ASM244817v1	NZ_CP023638	Mycobacterium tuberculosis strain TBV4766 chromosome, complete genome	3	366419-367117	1	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	TTCGCGAAGCCGATGTTGTAGCTGCCGGTGTTG	33	2	2	366707-366748|366782-366814	NZ_CP023638.1_374738-374779|NZ_CP023638.1_373553-373585	NA	10	10	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|101aa|up_4|NZ_CP023638.1_363431_363734_+,NA|161aa|down_1|NZ_CP023638.1_376527_377010_-,NA|410aa|down_5|NZ_CP023638.1_379126_380356_+	NA|262aa|up_9|NZ_CP023638.1_358135_358921_+	PRK14103, PRK14103, trans-aconitate 2-methyltransferase; Provisional	NA|268aa|up_8|NZ_CP023638.1_358909_359713_-	COG4424, COG4424, Uncharacterized protein conserved in bacteria [Function unknown]	NA|466aa|up_7|NZ_CP023638.1_359722_361120_-	cd16027, SGSH, N-sulfoglucosamine sulfohydrolase (SGSH; sulfamidase)	NA|589aa|up_6|NZ_CP023638.1_361298_363065_+	pfam00934, PE, PE family	NA|76aa|up_5|NZ_CP023638.1_363207_363435_+	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|101aa|up_4|NZ_CP023638.1_363431_363734_+	NA	NA|74aa|up_3|NZ_CP023638.1_363781_364003_+	PHA01748, PHA01748, hypothetical protein	NA|142aa|up_2|NZ_CP023638.1_363999_364425_+	cd18755, PIN_MtVapC3_VapC21-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC3, VapC21 and related proteins	NA|211aa|up_1|NZ_CP023638.1_364560_365193_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|303aa|up_0|NZ_CP023638.1_365189_366098_+	cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs	NA|224aa|down_0|NZ_CP023638.1_375868_376540_+	TIGR02476, BluB, 5,6-dimethylbenzimidazole synthase	NA|161aa|down_1|NZ_CP023638.1_376527_377010_-	NA	NA|239aa|down_2|NZ_CP023638.1_377067_377784_+	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|219aa|down_3|NZ_CP023638.1_377885_378542_+	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown]	NA|164aa|down_4|NZ_CP023638.1_378611_379103_-	pfam13577, SnoaL_4, SnoaL-like domain	NA|410aa|down_5|NZ_CP023638.1_379126_380356_+	NA	NA|621aa|down_6|NZ_CP023638.1_380510_382373_+	COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones]	NA|129aa|down_7|NZ_CP023638.1_382444_382831_+	COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones]	NA|221aa|down_8|NZ_CP023638.1_382833_383496_-	pfam11259, DUF3060, Protein of unknown function (DUF3060)	NA|295aa|down_9|NZ_CP023638.1_383556_384441_+	COG2273, SKN1, Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism]
GCF_002448175.1_ASM244817v1	NZ_CP023638	Mycobacterium tuberculosis strain TBV4766 chromosome, complete genome	4	631141-631278	2	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGACCACGCCGGTG	18	2	3	631159-631176|631159-631176|631243-631260	NZ_CP023638.1_22466-22483|NZ_CP023638.1_1411912-1411929|NZ_CP023638.1_973091-973108	NA	3	3	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|54aa|up_7|NZ_CP023638.1_621979_622141_-,NA|478aa|up_0|NZ_CP023638.1_628156_629590_-,NA|450aa|down_2|NZ_CP023638.1_632913_634263_-,NA|93aa|down_5|NZ_CP023638.1_635793_636072_-	NA|325aa|up_9|NZ_CP023638.1_619749_620724_+	TIGR03144, cytochrome_c_biogenesis_protein_chloroplast, cytochrome c-type biogenesis protein CcsB	NA|406aa|up_8|NZ_CP023638.1_620765_621983_+	COG0455, flhG, Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility]	NA|54aa|up_7|NZ_CP023638.1_621979_622141_-	NA	NA|106aa|up_6|NZ_CP023638.1_622187_622505_+	pfam14012, DUF4229, Protein of unknown function (DUF4229)	NA|595aa|up_5|NZ_CP023638.1_622651_624436_+	pfam00934, PE, PE family	NA|336aa|up_4|NZ_CP023638.1_624331_625339_-	TIGR00747, 3-oxoacyl-_synthase_3, 3-oxoacyl-(acyl-carrier-protein) synthase III	NA|293aa|up_3|NZ_CP023638.1_625420_626299_-	TIGR00751, 14-dihydroxy-2-naphthoate_octaprenyltransferase, 1,4-dihydroxy-2-naphthoate octaprenyltransferase	NA|265aa|up_2|NZ_CP023638.1_626315_627110_+	PRK07823, PRK07823, S-methyl-5'-thioadenosine phosphorylase	NA|347aa|up_1|NZ_CP023638.1_627106_628147_+	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs	NA|478aa|up_0|NZ_CP023638.1_628156_629590_-	NA	NA|211aa|down_0|NZ_CP023638.1_631601_632234_+	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily	NA|221aa|down_1|NZ_CP023638.1_632230_632893_+	COG3222, COG3222, Uncharacterized protein conserved in bacteria [Function unknown]	NA|450aa|down_2|NZ_CP023638.1_632913_634263_-	NA	NA|381aa|down_3|NZ_CP023638.1_634274_635417_-	PRK07824, PRK07824, o-succinylbenzoate--CoA ligase	NA|101aa|down_4|NZ_CP023638.1_635431_635734_-	pfam11829, DUF3349, Protein of unknown function (DUF3349)	NA|93aa|down_5|NZ_CP023638.1_635793_636072_-	NA	NA|418aa|down_6|NZ_CP023638.1_636068_637322_-	COG0306, PitA, Phosphate/sulphate permeases [Inorganic ion transport and metabolism]	NA|129aa|down_7|NZ_CP023638.1_637441_637828_-	cd07264, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|295aa|down_8|NZ_CP023638.1_637890_638775_-	PRK05866, PRK05866, SDR family oxidoreductase	NA|301aa|down_9|NZ_CP023638.1_638870_639773_-	PRK08321, PRK08321, 1,4-dihydroxy-2-naphthoyl-CoA synthase
GCF_002448175.1_ASM244817v1	NZ_CP023638	Mycobacterium tuberculosis strain TBV4766 chromosome, complete genome	5	691875-691951	2	CRISPRCasFinder	no	c2c9_V-U4	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type V-U4	TGAGGTGCGGCGTGAGCGCGGGT	23	0	0	NA	NA	NA	1	1	TypeV-U4	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA	NA|72aa|up_9|NZ_CP023638.1_677559_677775_+	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|136aa|up_8|NZ_CP023638.1_677771_678179_+	cd18696, PIN_MtVapC26-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC26 and related proteins	NA|229aa|up_7|NZ_CP023638.1_678238_678925_-	pfam10738, Lpp-LpqN, Probable lipoprotein LpqN	NA|878aa|up_6|NZ_CP023638.1_679078_681712_+	COG3537, COG3537, Putative alpha-1,2-mannosidase [Carbohydrate transport and metabolism]	NA|796aa|up_5|NZ_CP023638.1_681734_684122_-	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region	NA|241aa|up_4|NZ_CP023638.1_684259_684982_+	COG2186, FadR, Transcriptional regulators [Transcription]	NA|266aa|up_3|NZ_CP023638.1_684978_685776_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|296aa|up_2|NZ_CP023638.1_685777_686665_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|405aa|up_1|NZ_CP023638.1_686670_687885_+	pfam11887, Mce4_CUP1, Cholesterol uptake porter CUP1 of Mce4, putative	NA|482aa|up_0|NZ_CP023638.1_688908_690354_+	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|517aa|down_0|NZ_CP023638.1_693086_694637_+	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|131aa|down_1|NZ_CP023638.1_694688_695081_-	cd18768, PIN_MtVapC4-C5-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4, VapC5, and related proteins	NA|86aa|down_2|NZ_CP023638.1_695077_695335_-	COG4118, Phd, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|412aa|down_3|NZ_CP023638.1_695517_696753_-	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|138aa|down_4|NZ_CP023638.1_697003_697417_-	cd18681, PIN_MtVapC27-VapC40_like, VapC-like PIN domain of Mycobacterium tuberculosis VapC27, and VapC40, and related proteins	NA|79aa|down_5|NZ_CP023638.1_697413_697650_-	COG2002, AbrB, Regulators of stationary/sporulation gene expression [Transcription]	NA|169aa|down_6|NZ_CP023638.1_697753_698260_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|157aa|down_7|NZ_CP023638.1_698373_698844_-	PRK10755, PRK10755, two-component system sensor histidine kinase PmrB	NA|254aa|down_8|NZ_CP023638.1_698887_699649_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|104aa|down_9|NZ_CP023638.1_699705_700017_+	pfam03413, PepSY, Peptidase propeptide and YPEB domain
GCF_002448175.1_ASM244817v1	NZ_CP023638	Mycobacterium tuberculosis strain TBV4766 chromosome, complete genome	6	926462-927409	3	CRT	no	csa3	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type I-A	CGGGGCCGGCGGNNCCGGCGG	21	1	3	927245-927280|927245-927280|927245-927280	NZ_CP023638.1_674978-674943|NZ_CP023638.1_1213592-1213627|NZ_CP023638.1_2423575-2423540	NA	19	19	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA|184aa|down_2|NZ_CP023638.1_931419_931971_-,NA|81aa|down_8|NZ_CP023638.1_937434_937677_+	NA|390aa|up_9|NZ_CP023638.1_916327_917497_-	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family	NA|339aa|up_8|NZ_CP023638.1_917584_918601_-	cd01050, Acyl_ACP_Desat, Acyl ACP desaturase, ferritin-like diiron-binding domain	NA|214aa|up_7|NZ_CP023638.1_918762_919404_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|352aa|up_6|NZ_CP023638.1_919484_920540_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	csa3|131aa|up_5|NZ_CP023638.1_920591_920984_-	smart00418, HTH_ARSR, helix_turn_helix, Arsenical Resistance Operon Repressor	NA|141aa|up_4|NZ_CP023638.1_921041_921464_-	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis]	NA|97aa|up_3|NZ_CP023638.1_921425_921716_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|302aa|up_2|NZ_CP023638.1_921820_922726_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|272aa|up_1|NZ_CP023638.1_922744_923560_-	TIGR04255, hypothetical_protein, TIGR04255 family protein	NA|138aa|up_0|NZ_CP023638.1_924801_925215_+	pfam00934, PE, PE family	NA|883aa|down_0|NZ_CP023638.1_927678_930327_-	pfam00934, PE, PE family	NA|215aa|down_1|NZ_CP023638.1_930794_931439_+	pfam14032, PknH_C, PknH-like extracellular domain	NA|184aa|down_2|NZ_CP023638.1_931419_931971_-	NA	NA|218aa|down_3|NZ_CP023638.1_932120_932774_-	COG4849, COG4849, Predicted nucleotidyltransferase [General function prediction    only]	NA|343aa|down_4|NZ_CP023638.1_932844_933873_-	COG4861, COG4861, Uncharacterized protein conserved in bacteria [Function unknown]	NA|257aa|down_5|NZ_CP023638.1_934561_935332_+	pfam01427, Peptidase_M15, D-ala-D-ala dipeptidase	NA|271aa|down_6|NZ_CP023638.1_935418_936231_+	pfam13847, Methyltransf_31, Methyltransferase domain	NA|287aa|down_7|NZ_CP023638.1_936298_937159_-	TIGR01250, Proline_iminopeptidase, proline-specific peptidase, Bacillus coagulans-type subfamily	NA|81aa|down_8|NZ_CP023638.1_937434_937677_+	NA	NA|431aa|down_9|NZ_CP023638.1_937953_939246_+	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily
GCF_002448175.1_ASM244817v1	NZ_CP023638	Mycobacterium tuberculosis strain TBV4766 chromosome, complete genome	7	1191168-1191276	3	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GACAGCCAGCCGGCTGACCCGCCGT	25	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA	NA|544aa|up_9|NZ_CP023638.1_1180535_1182167_+	cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles	NA|355aa|up_8|NZ_CP023638.1_1182242_1183307_+	COG3804, COG3804, Uncharacterized conserved protein related to dihydrodipicolinate reductase [Function unknown]	NA|158aa|up_7|NZ_CP023638.1_1183359_1183833_+	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|288aa|up_6|NZ_CP023638.1_1183866_1184730_+	cd01908, YafJ, Glutamine amidotransferases class-II (Gn-AT)_YafJ-type	NA|286aa|up_5|NZ_CP023638.1_1184734_1185592_+	COG1752, RssA, Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]	NA|361aa|up_4|NZ_CP023638.1_1185592_1186675_-	cd07228, Pat_NTE_like_bacteria, Bacterial patatin-like phospholipase domain containing protein 6	NA|140aa|up_3|NZ_CP023638.1_1186755_1187175_-	pfam17301, LpqV, Putative lipoprotein LpqV	NA|189aa|up_2|NZ_CP023638.1_1187286_1187853_+	cd10548, cupin_CDO, cysteine dioxygenase, cupin domain	NA|132aa|up_1|NZ_CP023638.1_1187849_1188245_+	cd01447, Polysulfide_ST, Polysulfide-sulfurtransferase - Rhodanese Homology Domain	NA|668aa|up_0|NZ_CP023638.1_1188272_1190276_-	pfam00934, PE, PE family	NA|588aa|down_0|NZ_CP023638.1_1192361_1194125_-	COG4425, COG4425, Predicted membrane protein [Function unknown]	NA|258aa|down_1|NZ_CP023638.1_1194121_1194895_-	PRK05862, PRK05862, enoyl-CoA hydratase; Provisional	NA|346aa|down_2|NZ_CP023638.1_1194906_1195944_-	PRK05617, PRK05617, 3-hydroxyisobutyryl-CoA hydrolase; Provisional	NA|279aa|down_3|NZ_CP023638.1_1196130_1196967_+	COG4760, COG4760, Predicted membrane protein [Function unknown]	NA|284aa|down_4|NZ_CP023638.1_1197082_1197934_+	pfam18741, MTES_1575, REase_MTES_1575	NA|406aa|down_5|NZ_CP023638.1_1198007_1199225_-	PRK07851, PRK07851, acetyl-CoA C-acetyltransferase	NA|315aa|down_6|NZ_CP023638.1_1199277_1200222_-	cd01836, FeeA_FeeB_like, SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases	NA|356aa|down_7|NZ_CP023638.1_1200444_1201512_+	COG0657, Aes, Esterase/lipase [Lipid metabolism]	NA|465aa|down_8|NZ_CP023638.1_1201568_1202963_+	TIGR01137, Cystathionine_beta-synthase, cystathionine beta-synthase	NA|241aa|down_9|NZ_CP023638.1_1203164_1203887_+	pfam06271, RDD, RDD family
GCF_002448175.1_ASM244817v1	NZ_CP023638	Mycobacterium tuberculosis strain TBV4766 chromosome, complete genome	8	1211802-1212649	4	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GGCGGTGTCGGCGGTGCCGGCGG	23	2	68	1212359-1212380|1212359-1212380|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494|1212476-1212494	NZ_CP023638.1_837283-837304|NZ_CP023638.1_1217487-1217508|NZ_CP023638.1_674642-674624|NZ_CP023638.1_1213319-1213337|NZ_CP023638.1_1217460-1217478|NZ_CP023638.1_1217532-1217550|NZ_CP023638.1_1630544-1630526|NZ_CP023638.1_1990658-1990640|NZ_CP023638.1_2061380-2061362|NZ_CP023638.1_2061827-2061809|NZ_CP023638.1_2061926-2061908|NZ_CP023638.1_2801892-2801874|NZ_CP023638.1_2805420-2805402|NZ_CP023638.1_150187-150205|NZ_CP023638.1_335184-335166|NZ_CP023638.1_335637-335619|NZ_CP023638.1_335688-335670|NZ_CP023638.1_335697-335679|NZ_CP023638.1_337968-337950|NZ_CP023638.1_338364-338346|NZ_CP023638.1_338393-338411|NZ_CP023638.1_338487-338469|NZ_CP023638.1_363009-362991|NZ_CP023638.1_443308-443290|NZ_CP023638.1_546652-546634|NZ_CP023638.1_623842-623860|NZ_CP023638.1_624064-624082|NZ_CP023638.1_673808-673790|NZ_CP023638.1_840066-840084|NZ_CP023638.1_1090831-1090849|NZ_CP023638.1_1091479-1091497|NZ_CP023638.1_1095537-1095519|NZ_CP023638.1_1212848-1212866|NZ_CP023638.1_1213238-1213256|NZ_CP023638.1_1217880-1217898|NZ_CP023638.1_1489056-1489038|NZ_CP023638.1_1618508-1618490|NZ_CP023638.1_1618961-1618943|NZ_CP023638.1_1635883-1635865|NZ_CP023638.1_1635892-1635874|NZ_CP023638.1_1864172-1864154|NZ_CP023638.1_1864700-1864682|NZ_CP023638.1_1989932-1989914|NZ_CP023638.1_2001292-2001310|NZ_CP023638.1_2088650-2088632|NZ_CP023638.1_2303350-2303332|NZ_CP023638.1_2356801-2356783|NZ_CP023638.1_2419401-2419419|NZ_CP023638.1_2423488-2423470|NZ_CP023638.1_2568983-2568965|NZ_CP023638.1_2693280-2693298|NZ_CP023638.1_2795207-2795189|NZ_CP023638.1_2795789-2795771|NZ_CP023638.1_3054379-3054397|NZ_CP023638.1_3054478-3054496|NZ_CP023638.1_3705286-3705304|NZ_CP023638.1_3737263-3737245|NZ_CP023638.1_3737887-3737869|NZ_CP023638.1_3738130-3738112|NZ_CP023638.1_3738263-3738245|NZ_CP023638.1_3802126-3802144|NZ_CP023638.1_3802309-3802327|NZ_CP023638.1_3802477-3802495|NZ_CP023638.1_3930299-3930317|NZ_CP023638.1_3932029-3932047|NZ_CP023638.1_3940536-3940554|NZ_CP023638.1_4031511-4031493|NZ_CP023638.1_4094035-4094053	NA	15	15	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|89aa|up_3|NZ_CP023638.1_1207234_1207501_+,NA|61aa|down_3|NZ_CP023638.1_1215067_1215250_+,NA|35aa|down_4|NZ_CP023638.1_1215359_1215464_+	NA|465aa|up_9|NZ_CP023638.1_1201568_1202963_+	TIGR01137, Cystathionine_beta-synthase, cystathionine beta-synthase	NA|241aa|up_8|NZ_CP023638.1_1203164_1203887_+	pfam06271, RDD, RDD family	NA|389aa|up_7|NZ_CP023638.1_1203918_1205085_+	PRK07811, PRK07811, cystathionine gamma-synthase; Provisional	NA|165aa|up_6|NZ_CP023638.1_1205155_1205650_-	PRK00226, greA, transcription elongation factor GreA; Reviewed	NA|145aa|up_5|NZ_CP023638.1_1205835_1206270_-	pfam14155, DUF4307, Domain of unknown function (DUF4307)	NA|289aa|up_4|NZ_CP023638.1_1206371_1207238_+	TIGR03446, mycothiol_Mca, mycothiol conjugate amidase Mca	NA|89aa|up_3|NZ_CP023638.1_1207234_1207501_+	NA	NA|674aa|up_2|NZ_CP023638.1_1207487_1209509_+	COG1331, COG1331, Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]	NA|243aa|up_1|NZ_CP023638.1_1209607_1210336_-	TIGR01065, Hypothetical_UPF0073_protein_yqfA	NA|263aa|up_0|NZ_CP023638.1_1210446_1211235_+	PRK14828, PRK14828, undecaprenyl pyrophosphate synthase; Provisional	NA|107aa|down_0|NZ_CP023638.1_1213882_1214203_+	COG0020, UppS, Undecaprenyl pyrophosphate synthase [Lipid metabolism]	NA|145aa|down_1|NZ_CP023638.1_1214355_1214790_+	pfam00934, PE, PE family	NA|56aa|down_2|NZ_CP023638.1_1214888_1215056_+	smart00637, CBD_II, CBD_II domain	NA|61aa|down_3|NZ_CP023638.1_1215067_1215250_+	NA	NA|35aa|down_4|NZ_CP023638.1_1215359_1215464_+	NA	NA|152aa|down_5|NZ_CP023638.1_1215441_1215897_+	pfam01670, Glyco_hydro_12, Glycosyl hydrolase family 12	NA|854aa|down_6|NZ_CP023638.1_1216311_1218873_+	pfam00934, PE, PE family	NA|313aa|down_7|NZ_CP023638.1_1219090_1220029_-	PRK05439, PRK05439, pantothenate kinase; Provisional	NA|427aa|down_8|NZ_CP023638.1_1220416_1221697_+	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed	NA|276aa|down_9|NZ_CP023638.1_1221801_1222629_+	cd01050, Acyl_ACP_Desat, Acyl ACP desaturase, ferritin-like diiron-binding domain
GCF_002448175.1_ASM244817v1	NZ_CP023638	Mycobacterium tuberculosis strain TBV4766 chromosome, complete genome	9	1572032-1573103	5	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGTTGCCGCCGGCACCGCCGTCGCCGAT	32	0	0	NA	NA	NA	15	15	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|106aa|up_7|NZ_CP023638.1_1563795_1564113_+,NA	NA|103aa|up_9|NZ_CP023638.1_1561310_1561619_+	pfam00934, PE, PE family	NA|540aa|up_8|NZ_CP023638.1_1561615_1563235_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|106aa|up_7|NZ_CP023638.1_1563795_1564113_+	NA	NA|209aa|up_6|NZ_CP023638.1_1564247_1564874_+	PRK00300, gmk, guanylate kinase; Provisional	NA|111aa|up_5|NZ_CP023638.1_1564939_1565272_+	TIGR00690, DNA-directed_RNA_polymerase_subunit_omega, DNA-directed RNA polymerase, omega subunit	NA|419aa|up_4|NZ_CP023638.1_1565287_1566544_+	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated	NA|404aa|up_3|NZ_CP023638.1_1566671_1567883_+	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|493aa|up_2|NZ_CP023638.1_1567955_1569434_-	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|462aa|up_1|NZ_CP023638.1_1569430_1570816_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|345aa|up_0|NZ_CP023638.1_1570893_1571928_+	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|134aa|down_0|NZ_CP023638.1_1573957_1574359_-	cd18741, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily	NA|86aa|down_1|NZ_CP023638.1_1574355_1574613_-	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|320aa|down_2|NZ_CP023638.1_1574695_1575655_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|321aa|down_3|NZ_CP023638.1_1575679_1576642_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|201aa|down_4|NZ_CP023638.1_1576775_1577378_+	COG3714, COG3714, Predicted membrane protein [Function unknown]	NA|656aa|down_5|NZ_CP023638.1_1577458_1579426_+	PRK14873, PRK14873, primosomal protein N'	NA|275aa|down_6|NZ_CP023638.1_1579443_1580268_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|161aa|down_7|NZ_CP023638.1_1580436_1580919_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|275aa|down_8|NZ_CP023638.1_1580990_1581815_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|313aa|down_9|NZ_CP023638.1_1582011_1582950_+	PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed
GCF_002448175.1_ASM244817v1	NZ_CP023638	Mycobacterium tuberculosis strain TBV4766 chromosome, complete genome	10	2088122-2088376	4	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCCNCCGTCGCCGCCNNTGCC	21	2	3	2088203-2088220|2088203-2088220|2088293-2088310	NZ_CP023638.1_401034-401017|NZ_CP023638.1_607297-607280|NZ_CP023638.1_3449993-3449976	NA	5	5	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|88aa|up_0|NZ_CP023638.1_2087481_2087745_-,NA	NA|165aa|up_9|NZ_CP023638.1_2073775_2074270_+	pfam02577, DNase-RNase, Bifunctional nuclease	NA|226aa|up_8|NZ_CP023638.1_2074673_2075351_+	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators	NA|942aa|up_7|NZ_CP023638.1_2075709_2078535_+	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase	NA|287aa|up_6|NZ_CP023638.1_2078761_2079622_-	PRK03204, PRK03204, haloalkane dehalogenase; Provisional	NA|289aa|up_5|NZ_CP023638.1_2079662_2080529_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|629aa|up_4|NZ_CP023638.1_2080533_2082420_-	TIGR00976, Hypothetical_protein_Rv1835c/MT1883/Mb1866c	NA|678aa|up_3|NZ_CP023638.1_2082435_2084469_-	cd01456, vWA_ywmD_type, VWA ywmD type:Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|742aa|up_2|NZ_CP023638.1_2084588_2086814_-	PRK02999, PRK02999, malate synthase G; Provisional	NA|132aa|up_1|NZ_CP023638.1_2087089_2087485_-	COG1848, COG1848, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]	NA|88aa|up_0|NZ_CP023638.1_2087481_2087745_-	NA	NA|346aa|down_0|NZ_CP023638.1_2089513_2090551_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|456aa|down_1|NZ_CP023638.1_2090550_2091918_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|479aa|down_2|NZ_CP023638.1_2092091_2093528_-	PRK07807, PRK07807, GuaB1 family IMP dehydrogenase-related protein	NA|484aa|down_3|NZ_CP023638.1_2093563_2095015_-	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase	NA|317aa|down_4|NZ_CP023638.1_2095044_2095995_-	cd07326, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase	NA|139aa|down_5|NZ_CP023638.1_2096009_2096426_-	COG3682, COG3682, Predicted transcriptional regulator [Transcription]	NA|141aa|down_6|NZ_CP023638.1_2096703_2097126_+	COG2050, PaaI, HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis,    transport, and catabolism]	NA|101aa|down_7|NZ_CP023638.1_2097174_2097477_+	pfam00547, Urease_gamma, Urease, gamma subunit	NA|105aa|down_8|NZ_CP023638.1_2097473_2097788_+	PRK13202, ureB, urease subunit beta; Reviewed	NA|578aa|down_9|NZ_CP023638.1_2097787_2099521_+	PRK13206, ureC, urease subunit alpha; Reviewed
GCF_002448175.1_ASM244817v1	NZ_CP023638	Mycobacterium tuberculosis strain TBV4766 chromosome, complete genome	11	2163214-2163318	6	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CAACCCAAACGGATTAATCGCGAAACCAGGGATCGT	36	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|136aa|up_2|NZ_CP023638.1_2159758_2160166_-,NA|127aa|down_6|NZ_CP023638.1_2176387_2176768_-	NA|216aa|up_9|NZ_CP023638.1_2153072_2153720_-	pfam14081, DUF4262, Domain of unknown function (DUF4262)	NA|741aa|up_8|NZ_CP023638.1_2153726_2155949_-	PRK15061, PRK15061, catalase/peroxidase	NA|148aa|up_7|NZ_CP023638.1_2155986_2156430_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|198aa|up_6|NZ_CP023638.1_2156543_2157137_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|202aa|up_5|NZ_CP023638.1_2157219_2157825_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|335aa|up_4|NZ_CP023638.1_2157924_2158929_-	cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|251aa|up_3|NZ_CP023638.1_2159028_2159781_+	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|136aa|up_2|NZ_CP023638.1_2159758_2160166_-	NA	NA|368aa|up_1|NZ_CP023638.1_2160300_2161404_+	COG2224, AceA, Isocitrate lyase [Energy production and conversion]	NA|399aa|up_0|NZ_CP023638.1_2161403_2162600_+	COG2224, AceA, Isocitrate lyase [Energy production and conversion]	NA|988aa|down_0|NZ_CP023638.1_2167486_2170450_-	pfam00823, PPE, PPE family	NA|155aa|down_1|NZ_CP023638.1_2170898_2171363_-	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|288aa|down_2|NZ_CP023638.1_2171460_2172324_+	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like	NA|424aa|down_3|NZ_CP023638.1_2172361_2173633_-	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|372aa|down_4|NZ_CP023638.1_2173904_2175020_+	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]	NA|447aa|down_5|NZ_CP023638.1_2175010_2176351_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|127aa|down_6|NZ_CP023638.1_2176387_2176768_-	NA	NA|621aa|down_7|NZ_CP023638.1_2176924_2178787_+	PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional	NA|160aa|down_8|NZ_CP023638.1_2178794_2179274_-	pfam09167, DUF1942, Domain of unknown function (DUF1942)	NA|258aa|down_9|NZ_CP023638.1_2179510_2180284_+	COG3361, COG3361, Uncharacterized conserved protein [Function unknown]
GCF_002448175.1_ASM244817v1	NZ_CP023638	Mycobacterium tuberculosis strain TBV4766 chromosome, complete genome	12	2168652-2168871	7	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GTGCCAGCCGGAATCGTGATCGGCGGAACCGTCACCGACGGAATACTCA	49	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|136aa|up_3|NZ_CP023638.1_2159758_2160166_-,NA|127aa|down_5|NZ_CP023638.1_2176387_2176768_-	NA|741aa|up_9|NZ_CP023638.1_2153726_2155949_-	PRK15061, PRK15061, catalase/peroxidase	NA|148aa|up_8|NZ_CP023638.1_2155986_2156430_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|198aa|up_7|NZ_CP023638.1_2156543_2157137_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|202aa|up_6|NZ_CP023638.1_2157219_2157825_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|335aa|up_5|NZ_CP023638.1_2157924_2158929_-	cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|251aa|up_4|NZ_CP023638.1_2159028_2159781_+	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|136aa|up_3|NZ_CP023638.1_2159758_2160166_-	NA	NA|368aa|up_2|NZ_CP023638.1_2160300_2161404_+	COG2224, AceA, Isocitrate lyase [Energy production and conversion]	NA|399aa|up_1|NZ_CP023638.1_2161403_2162600_+	COG2224, AceA, Isocitrate lyase [Energy production and conversion]	NA|1460aa|up_0|NZ_CP023638.1_2162769_2167149_-	pfam00823, PPE, PPE family	NA|155aa|down_0|NZ_CP023638.1_2170898_2171363_-	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|288aa|down_1|NZ_CP023638.1_2171460_2172324_+	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like	NA|424aa|down_2|NZ_CP023638.1_2172361_2173633_-	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|372aa|down_3|NZ_CP023638.1_2173904_2175020_+	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]	NA|447aa|down_4|NZ_CP023638.1_2175010_2176351_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|127aa|down_5|NZ_CP023638.1_2176387_2176768_-	NA	NA|621aa|down_6|NZ_CP023638.1_2176924_2178787_+	PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional	NA|160aa|down_7|NZ_CP023638.1_2178794_2179274_-	pfam09167, DUF1942, Domain of unknown function (DUF1942)	NA|258aa|down_8|NZ_CP023638.1_2179510_2180284_+	COG3361, COG3361, Uncharacterized conserved protein [Function unknown]	NA|256aa|down_9|NZ_CP023638.1_2180287_2181055_-	PRK05867, PRK05867, SDR family oxidoreductase
GCF_002448175.1_ASM244817v1	NZ_CP023638	Mycobacterium tuberculosis strain TBV4766 chromosome, complete genome	13	3118970-3120324	3,8,5	PILER-CR,CRISPRCasFinder,CRT	no	c2c9_V-U4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type III-A,Type III-B,Type III-D,Type III-C	GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	36,36,36	0	0	NA	NA	II-B,III-A:II-B,III-A:II-B,III-A	17,17,18	18	TypeIII-A,TypeIII-B,TypeIII-D,TypeIII-C	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|85aa|up_8|NZ_CP023638.1_3112249_3112504_-,NA|135aa|up_7|NZ_CP023638.1_3112651_3113056_+,NA|64aa|up_6|NZ_CP023638.1_3113052_3113244_+,NA|86aa|up_4|NZ_CP023638.1_3114830_3115088_+,NA|104aa|up_3|NZ_CP023638.1_3115192_3115504_+,NA|203aa|up_2|NZ_CP023638.1_3115923_3116532_+,NA	NA|92aa|up_9|NZ_CP023638.1_3111798_3112074_+	COG4453, COG4453, Uncharacterized protein conserved in bacteria [Function unknown]	NA|85aa|up_8|NZ_CP023638.1_3112249_3112504_-	NA	NA|135aa|up_7|NZ_CP023638.1_3112651_3113056_+	NA	NA|64aa|up_6|NZ_CP023638.1_3113052_3113244_+	NA	NA|385aa|up_5|NZ_CP023638.1_3113442_3114597_+	pfam00665, rve, Integrase core domain	NA|86aa|up_4|NZ_CP023638.1_3114830_3115088_+	NA	NA|104aa|up_3|NZ_CP023638.1_3115192_3115504_+	NA	NA|203aa|up_2|NZ_CP023638.1_3115923_3116532_+	NA	NA|470aa|up_1|NZ_CP023638.1_3116602_3118012_+	pfam00665, rve, Integrase core domain	NA|271aa|up_0|NZ_CP023638.1_3118008_3118821_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|421aa|down_0|NZ_CP023638.1_3120350_3121612_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas2|114aa|down_1|NZ_CP023638.1_3123409_3123751_-	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	cas1|339aa|down_2|NZ_CP023638.1_3123751_3124768_-	TIGR00287, CRISPR-associated_endonuclease_Cas1, CRISPR-associated endonuclease Cas1	csm6|383aa|down_3|NZ_CP023638.1_3124780_3125929_-	cd09699, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	csm5gr7|376aa|down_4|NZ_CP023638.1_3126024_3127152_-	COG1332, COG1332, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csm4gr5|303aa|down_5|NZ_CP023638.1_3127148_3128057_-	COG1567, COG1567, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csm3gr7|237aa|down_6|NZ_CP023638.1_3128037_3128748_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|125aa|down_7|NZ_CP023638.1_3128757_3129132_-	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	cas10|813aa|down_8|NZ_CP023638.1_3129128_3131567_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	cas6|241aa|down_9|NZ_CP023638.1_3131563_3132286_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]
GCF_002448175.1_ASM244817v1	NZ_CP023638	Mycobacterium tuberculosis strain TBV4766 chromosome, complete genome	14	3121647-3123361	9,6,4	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type III-A,Type III-B,Type III-D,Type III-C	GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	36,36,36	0	0	NA	NA	II-B,III-A:II-B,III-A:II-B,III-A	23,23,22	23	TypeIII-A,TypeIII-B,TypeIII-D,TypeIII-C	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|85aa|up_9|NZ_CP023638.1_3112249_3112504_-,NA|135aa|up_8|NZ_CP023638.1_3112651_3113056_+,NA|64aa|up_7|NZ_CP023638.1_3113052_3113244_+,NA|86aa|up_5|NZ_CP023638.1_3114830_3115088_+,NA|104aa|up_4|NZ_CP023638.1_3115192_3115504_+,NA|203aa|up_3|NZ_CP023638.1_3115923_3116532_+,NA	NA|85aa|up_9|NZ_CP023638.1_3112249_3112504_-	NA	NA|135aa|up_8|NZ_CP023638.1_3112651_3113056_+	NA	NA|64aa|up_7|NZ_CP023638.1_3113052_3113244_+	NA	NA|385aa|up_6|NZ_CP023638.1_3113442_3114597_+	pfam00665, rve, Integrase core domain	NA|86aa|up_5|NZ_CP023638.1_3114830_3115088_+	NA	NA|104aa|up_4|NZ_CP023638.1_3115192_3115504_+	NA	NA|203aa|up_3|NZ_CP023638.1_3115923_3116532_+	NA	NA|470aa|up_2|NZ_CP023638.1_3116602_3118012_+	pfam00665, rve, Integrase core domain	NA|271aa|up_1|NZ_CP023638.1_3118008_3118821_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|421aa|up_0|NZ_CP023638.1_3120350_3121612_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas2|114aa|down_0|NZ_CP023638.1_3123409_3123751_-	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	cas1|339aa|down_1|NZ_CP023638.1_3123751_3124768_-	TIGR00287, CRISPR-associated_endonuclease_Cas1, CRISPR-associated endonuclease Cas1	csm6|383aa|down_2|NZ_CP023638.1_3124780_3125929_-	cd09699, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	csm5gr7|376aa|down_3|NZ_CP023638.1_3126024_3127152_-	COG1332, COG1332, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csm4gr5|303aa|down_4|NZ_CP023638.1_3127148_3128057_-	COG1567, COG1567, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csm3gr7|237aa|down_5|NZ_CP023638.1_3128037_3128748_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|125aa|down_6|NZ_CP023638.1_3128757_3129132_-	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	cas10|813aa|down_7|NZ_CP023638.1_3129128_3131567_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	cas6|241aa|down_8|NZ_CP023638.1_3131563_3132286_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|182aa|down_9|NZ_CP023638.1_3132685_3133231_-	COG4293, COG4293, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_002448175.1_ASM244817v1	NZ_CP023638	Mycobacterium tuberculosis strain TBV4766 chromosome, complete genome	15	3740457-3740998	7	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGTTNCCNCCGTTGCCGCC	23	0	0	NA	NA	NA	7	7	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA|96aa|down_4|NZ_CP023638.1_3755099_3755387_-,NA|87aa|down_9|NZ_CP023638.1_3768507_3768768_-	NA|282aa|up_9|NZ_CP023638.1_3719708_3720554_-	pfam05305, DUF732, Protein of unknown function (DUF732)	NA|147aa|up_8|NZ_CP023638.1_3721028_3721469_+	cd04770, HTH_HMRTR, Helix-Turn-Helix DNA binding domain of Heavy Metal Resistance transcription regulators	NA|290aa|up_7|NZ_CP023638.1_3721502_3722372_-	TIGR00766, Uncharacterized_protein_Dda3937_02003, inner membrane protein YhjD	NA|337aa|up_6|NZ_CP023638.1_3722392_3723403_-	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed	NA|211aa|up_5|NZ_CP023638.1_3723687_3724320_+	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional	NA|410aa|up_4|NZ_CP023638.1_3724386_3725616_-	PRK08299, PRK08299, NADP-dependent isocitrate dehydrogenase	NA|450aa|up_3|NZ_CP023638.1_3725898_3727248_+	PRK07812, PRK07812, O-acetylhomoserine aminocarboxypropyltransferase; Validated	NA|380aa|up_2|NZ_CP023638.1_3727259_3728399_+	PRK00175, metX, homoserine O-acetyltransferase; Provisional	NA|244aa|up_1|NZ_CP023638.1_3728395_3729127_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|2524aa|up_0|NZ_CP023638.1_3729135_3736707_-	pfam00823, PPE, PPE family	NA|86aa|down_0|NZ_CP023638.1_3742969_3743227_-	pfam11222, DUF3017, Protein of unknown function (DUF3017)	NA|3158aa|down_1|NZ_CP023638.1_3743482_3752956_-	pfam00823, PPE, PPE family	NA|149aa|down_2|NZ_CP023638.1_3753581_3754028_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|247aa|down_3|NZ_CP023638.1_3754064_3754805_-	pfam01610, DDE_Tnp_ISL3, Transposase	NA|96aa|down_4|NZ_CP023638.1_3755099_3755387_-	NA	NA|3717aa|down_5|NZ_CP023638.1_3755723_3766874_-	pfam00823, PPE, PPE family	NA|265aa|down_6|NZ_CP023638.1_3767117_3767912_-	pfam08031, BBE, Berberine and berberine like	NA|124aa|down_7|NZ_CP023638.1_3767993_3768365_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|73aa|down_8|NZ_CP023638.1_3768262_3768481_-	pfam01565, FAD_binding_4, FAD binding domain	NA|87aa|down_9|NZ_CP023638.1_3768507_3768768_-	NA
GCF_002448175.1_ASM244817v1	NZ_CP023638	Mycobacterium tuberculosis strain TBV4766 chromosome, complete genome	16	3762255-3762381	5	PILER-CR	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GTTGCCGATGCCGGTGTTGAAA	22	0	0	NA	NA	NA	2	2	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|96aa|up_0|NZ_CP023638.1_3755099_3755387_-,NA|87aa|down_3|NZ_CP023638.1_3768507_3768768_-	NA|410aa|up_9|NZ_CP023638.1_3724386_3725616_-	PRK08299, PRK08299, NADP-dependent isocitrate dehydrogenase	NA|450aa|up_8|NZ_CP023638.1_3725898_3727248_+	PRK07812, PRK07812, O-acetylhomoserine aminocarboxypropyltransferase; Validated	NA|380aa|up_7|NZ_CP023638.1_3727259_3728399_+	PRK00175, metX, homoserine O-acetyltransferase; Provisional	NA|244aa|up_6|NZ_CP023638.1_3728395_3729127_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|2524aa|up_5|NZ_CP023638.1_3729135_3736707_-	pfam00823, PPE, PPE family	NA|86aa|up_4|NZ_CP023638.1_3742969_3743227_-	pfam11222, DUF3017, Protein of unknown function (DUF3017)	NA|3158aa|up_3|NZ_CP023638.1_3743482_3752956_-	pfam00823, PPE, PPE family	NA|149aa|up_2|NZ_CP023638.1_3753581_3754028_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|247aa|up_1|NZ_CP023638.1_3754064_3754805_-	pfam01610, DDE_Tnp_ISL3, Transposase	NA|96aa|up_0|NZ_CP023638.1_3755099_3755387_-	NA	NA|265aa|down_0|NZ_CP023638.1_3767117_3767912_-	pfam08031, BBE, Berberine and berberine like	NA|124aa|down_1|NZ_CP023638.1_3767993_3768365_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|73aa|down_2|NZ_CP023638.1_3768262_3768481_-	pfam01565, FAD_binding_4, FAD binding domain	NA|87aa|down_3|NZ_CP023638.1_3768507_3768768_-	NA	NA|130aa|down_4|NZ_CP023638.1_3768882_3769272_+	pfam05305, DUF732, Protein of unknown function (DUF732)	NA|98aa|down_5|NZ_CP023638.1_3769285_3769579_-	pfam11222, DUF3017, Protein of unknown function (DUF3017)	NA|282aa|down_6|NZ_CP023638.1_3769575_3770421_-	PRK14193, PRK14193, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	NA|92aa|down_7|NZ_CP023638.1_3770544_3770820_+	COG2161, StbD, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|86aa|down_8|NZ_CP023638.1_3770816_3771074_+	pfam06769, YoeB_toxin, YoeB-like toxin of bacterial type II toxin-antitoxin system	NA|397aa|down_9|NZ_CP023638.1_3771115_3772306_+	cd02803, OYE_like_FMN_family, Old yellow enzyme (OYE)-like FMN binding domain
GCF_002448175.1_ASM244817v1	NZ_CP023638	Mycobacterium tuberculosis strain TBV4766 chromosome, complete genome	17	3943337-3943529	6	PILER-CR	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	TGCCGGCGTCGCCGGCGTCGCCGCCACCACCACCGTTGCCGCCAGCGCCGCCG	53	0	0	NA	NA	NA	2	2	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA|280aa|down_4|NZ_CP023638.1_3953210_3954050_+	NA|255aa|up_9|NZ_CP023638.1_3919867_3920632_-	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|318aa|up_8|NZ_CP023638.1_3920857_3921811_-	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	NA|64aa|up_7|NZ_CP023638.1_3921835_3922027_-	COG1141, Fer, Ferredoxin [Energy production and conversion]	NA|401aa|up_6|NZ_CP023638.1_3922241_3923444_+	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|374aa|up_5|NZ_CP023638.1_3923468_3924590_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|503aa|up_4|NZ_CP023638.1_3924660_3926169_+	PRK07867, PRK07867, acyl-CoA synthetase; Validated	NA|1385aa|up_3|NZ_CP023638.1_3926339_3930494_+	pfam00934, PE, PE family	NA|1902aa|up_2|NZ_CP023638.1_3930784_3936490_+	pfam00934, PE, PE family	NA|516aa|up_1|NZ_CP023638.1_3936656_3938204_-	PRK07586, PRK07586, acetolactate synthase large subunit	NA|279aa|up_0|NZ_CP023638.1_3938200_3939037_-	COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]	NA|219aa|down_0|NZ_CP023638.1_3944871_3945528_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|1490aa|down_1|NZ_CP023638.1_3945573_3950043_+	pfam00934, PE, PE family	NA|549aa|down_2|NZ_CP023638.1_3950603_3952250_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|264aa|down_3|NZ_CP023638.1_3952323_3953115_+	PRK07799, PRK07799, crotonase/enoyl-CoA hydratase family protein	NA|280aa|down_4|NZ_CP023638.1_3953210_3954050_+	NA	NA|399aa|down_5|NZ_CP023638.1_3954104_3955301_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|237aa|down_6|NZ_CP023638.1_3955329_3956040_+	pfam06314, ADC, Acetoacetate decarboxylase (ADC)	NA|348aa|down_7|NZ_CP023638.1_3956104_3957148_-	TIGR03559, F420_Rv3520c, probable F420-dependent oxidoreductase, Rv3520c family	NA|304aa|down_8|NZ_CP023638.1_3957300_3958212_+	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only]	NA|355aa|down_9|NZ_CP023638.1_3958227_3959292_+	PRK07937, PRK07937, lipid-transfer protein; Provisional
GCF_002448175.1_ASM244817v1	NZ_CP023638	Mycobacterium tuberculosis strain TBV4766 chromosome, complete genome	18	3948144-3949895	8	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CANCGGCGGCACCGGCGGCNNCGGCGGNNNCGGCGG	36	2	9	3948735-3948770|3948735-3948770|3948735-3948770|3948735-3948770|3948735-3948770|3949626-3949652|3949626-3949652|3949626-3949652|3949626-3949652	NZ_CP023638.1_3946851-3946886|NZ_CP023638.1_3947193-3947228|NZ_CP023638.1_3947784-3947819|NZ_CP023638.1_3948135-3948170|NZ_CP023638.1_3932584-3932619|NZ_CP023638.1_361958-361984|NZ_CP023638.1_3941037-3941063|NZ_CP023638.1_3941373-3941399|NZ_CP023638.1_3941719-3941745	NA	21	21	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA|280aa|down_2|NZ_CP023638.1_3953210_3954050_+	NA|318aa|up_9|NZ_CP023638.1_3920857_3921811_-	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	NA|64aa|up_8|NZ_CP023638.1_3921835_3922027_-	COG1141, Fer, Ferredoxin [Energy production and conversion]	NA|401aa|up_7|NZ_CP023638.1_3922241_3923444_+	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|374aa|up_6|NZ_CP023638.1_3923468_3924590_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|503aa|up_5|NZ_CP023638.1_3924660_3926169_+	PRK07867, PRK07867, acyl-CoA synthetase; Validated	NA|1385aa|up_4|NZ_CP023638.1_3926339_3930494_+	pfam00934, PE, PE family	NA|1902aa|up_3|NZ_CP023638.1_3930784_3936490_+	pfam00934, PE, PE family	NA|516aa|up_2|NZ_CP023638.1_3936656_3938204_-	PRK07586, PRK07586, acetolactate synthase large subunit	NA|279aa|up_1|NZ_CP023638.1_3938200_3939037_-	COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]	NA|219aa|up_0|NZ_CP023638.1_3944871_3945528_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|549aa|down_0|NZ_CP023638.1_3950603_3952250_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|264aa|down_1|NZ_CP023638.1_3952323_3953115_+	PRK07799, PRK07799, crotonase/enoyl-CoA hydratase family protein	NA|280aa|down_2|NZ_CP023638.1_3953210_3954050_+	NA	NA|399aa|down_3|NZ_CP023638.1_3954104_3955301_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|237aa|down_4|NZ_CP023638.1_3955329_3956040_+	pfam06314, ADC, Acetoacetate decarboxylase (ADC)	NA|348aa|down_5|NZ_CP023638.1_3956104_3957148_-	TIGR03559, F420_Rv3520c, probable F420-dependent oxidoreductase, Rv3520c family	NA|304aa|down_6|NZ_CP023638.1_3957300_3958212_+	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only]	NA|355aa|down_7|NZ_CP023638.1_3958227_3959292_+	PRK07937, PRK07937, lipid-transfer protein; Provisional	NA|395aa|down_8|NZ_CP023638.1_3959308_3960493_+	PRK08313, PRK08313, thiolase domain-containing protein	NA|344aa|down_9|NZ_CP023638.1_3960534_3961566_+	cd14952, NHL_PKND_like, NHL repeat domain of the protein kinase PknD
GCF_002448175.1_ASM244817v1	NZ_CP023638	Mycobacterium tuberculosis strain TBV4766 chromosome, complete genome	19	4110452-4110540	10	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCTCGGCGACGATGCGGGCCGGATGACGGCC	31	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|257aa|up_8|NZ_CP023638.1_4101038_4101809_-,NA|119aa|up_3|NZ_CP023638.1_4106943_4107300_+,NA|52aa|up_2|NZ_CP023638.1_4107399_4107555_+,NA|233aa|up_0|NZ_CP023638.1_4109556_4110255_-,NA|126aa|down_6|NZ_CP023638.1_4115775_4116153_+	NA|288aa|up_9|NZ_CP023638.1_4099420_4100284_+	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|257aa|up_8|NZ_CP023638.1_4101038_4101809_-	NA	NA|549aa|up_7|NZ_CP023638.1_4101805_4103452_-	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|288aa|up_6|NZ_CP023638.1_4103448_4104312_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|309aa|up_5|NZ_CP023638.1_4104304_4105231_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|542aa|up_4|NZ_CP023638.1_4105232_4106858_-	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|119aa|up_3|NZ_CP023638.1_4106943_4107300_+	NA	NA|52aa|up_2|NZ_CP023638.1_4107399_4107555_+	NA	NA|652aa|up_1|NZ_CP023638.1_4107565_4109521_+	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	NA|233aa|up_0|NZ_CP023638.1_4109556_4110255_-	NA	NA|173aa|down_0|NZ_CP023638.1_4110600_4111119_+	pfam07332, Phage_holin_3_6, Putative Actinobacterial Holin-X, holin superfamily III	NA|328aa|down_1|NZ_CP023638.1_4111119_4112103_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|398aa|down_2|NZ_CP023638.1_4112095_4113289_-	pfam13365, Trypsin_2, Trypsin-like peptidase domain	NA|274aa|down_3|NZ_CP023638.1_4113294_4114116_-	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes	NA|228aa|down_4|NZ_CP023638.1_4114247_4114931_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|246aa|down_5|NZ_CP023638.1_4114930_4115668_-	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]	NA|126aa|down_6|NZ_CP023638.1_4115775_4116153_+	NA	NA|225aa|down_7|NZ_CP023638.1_4116251_4116926_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|265aa|down_8|NZ_CP023638.1_4117031_4117826_-	cd16278, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|152aa|down_9|NZ_CP023638.1_4117832_4118288_-	cd02199, YjgF_YER057c_UK114_like_1, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function
