The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP023639	Mycobacterium tuberculosis strain TBV4768 chromosome, complete genome	4411173	2940911	2976277	4411173	protease,head,integrase,tRNA,transposase,capsid,terminase	Tupanvirus(11.11%)	41	2969712:2969739	2980694:2980721
WP_003905889.1|2940911_2942990_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	34.9	2.5e-104
WP_003413487.1|2943098_2943326_+	hypothetical protein	NA	NA	NA	NA	NA
WP_096869134.1|2943322_2944708_-	PE family protein	NA	NA	NA	NA	NA
WP_003413569.1|2945052_2945553_+	DUF1990 family protein	NA	NA	NA	NA	NA
WP_003413574.1|2945569_2946010_-	DoxX family membrane protein	NA	NA	NA	NA	NA
WP_003901437.1|2946156_2946834_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_003413583.1|2946818_2947172_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_003413586.1|2947184_2947610_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003901438.1|2947606_2948281_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003413589.1|2948358_2949180_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_003413592.1|2949315_2950209_+	universal stress protein	NA	NA	NA	NA	NA
WP_003413594.1|2950211_2951030_-	universal stress protein	NA	NA	NA	NA	NA
WP_003899401.1|2951044_2952226_-|protease	site-2 protease family protein	protease	NA	NA	NA	NA
WP_003413598.1|2952284_2952716_-	CBS domain-containing protein	NA	A0A2I6B2H4	Macacine_betaherpesvirus	100.0	1.9e-75
WP_003899402.1|2953229_2954471_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003899403.1|2954780_2955143_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003902322.1|2955489_2956614_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413614.1|2956615_2957155_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003413616.1|2957294_2958593_+	RNA-splicing ligase RtcB	NA	A2RQD0	Archaeal_BJ1_virus	43.3	3.8e-90
WP_003413619.1|2958631_2958913_-	DUF1876 domain-containing protein	NA	NA	NA	NA	NA
WP_003413625.1|2959057_2959543_-	hemerythrin domain-containing protein	NA	NA	NA	NA	NA
WP_003902325.1|2959569_2959827_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009938544.1|2959827_2962164_-	PE family protein	NA	NA	NA	NA	NA
WP_003899405.1|2962192_2962435_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003899406.1|2962435_2963113_+	membrane protein	NA	NA	NA	NA	NA
WP_003413654.1|2963308_2963965_+	DedA family protein	NA	NA	NA	NA	NA
WP_003413657.1|2964127_2964574_+	anti-sigma factor antagonist	NA	NA	NA	NA	NA
WP_003413663.1|2964748_2965081_-	YnfA family protein	NA	NA	NA	NA	NA
WP_003413665.1|2965200_2965560_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003413675.1|2965661_2966120_+	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_003899407.1|2966255_2966636_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003413686.1|2966632_2968129_+	ACR3 family arsenite efflux transporter	NA	A0A2H4PQT9	Staphylococcus_phage	39.7	5.1e-14
WP_085972563.1|2968318_2968555_+	antitoxin MazE family protein	NA	NA	NA	NA	NA
WP_077365235.1|2968627_2968801_+	hypothetical protein	NA	NA	NA	NA	NA
2969712:2969739	attL	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
WP_003899409.1|2969845_2970277_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003900538.1|2970273_2971272_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2D1G8E2	Mycobacterium_phage	47.8	7.4e-62
WP_003900539.1|2971285_2971750_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_087902221.1|2971882_2973143_+|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
WP_003901443.1|2973517_2974957_-|capsid	phage major capsid protein	capsid	A0A1B3AYS4	Gordonia_phage	40.6	1.4e-66
WP_003899412.1|2974964_2975498_-|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	32.9	3.1e-06
WP_003899413.1|2975650_2976277_-|terminase	phage terminase small subunit P27 family	terminase	V9H0V4	Actinophage	47.2	1.6e-17
2980694:2980721	attR	ACTGGTTCAATCCCAGTATCGCGCACCA	NA	NA	NA	NA
>prophage 2
NZ_CP023639	Mycobacterium tuberculosis strain TBV4768 chromosome, complete genome	4411173	3710143	3796037	4411173	tRNA,transposase	Burkholderia_virus(28.57%)	56	NA	NA
WP_087902221.1|3710143_3711404_+|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
WP_009937401.1|3711459_3711621_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_003902445.1|3711642_3713172_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_003417413.1|3713104_3714043_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_003902446.1|3714051_3715419_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	25.8	9.0e-18
WP_003417415.1|3715487_3716705_+	D-alanyl-D-alanine carboxypeptidase DacB1	NA	A0A1P8VVG5	Erythrobacter_phage	27.3	8.0e-10
WP_003417416.1|3716800_3718309_+	sugar porter family MFS transporter	NA	NA	NA	NA	NA
WP_003417418.1|3718305_3719457_+	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA	NA
WP_003417421.1|3719647_3720493_-	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_003900026.1|3720967_3721408_+	heavy metal-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_003417435.1|3721441_3722311_-	inner membrane protein YhjD	NA	NA	NA	NA	NA
WP_003417440.1|3722331_3723342_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_009940431.1|3723626_3724259_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_003417452.1|3724325_3725555_-	NADP-dependent isocitrate dehydrogenase	NA	NA	NA	NA	NA
WP_003900028.1|3725837_3727187_+	bifunctional o-acetylhomoserine/o-acetylserine sulfhydrylase	NA	A0A0B5JD48	Pandoravirus	26.5	2.5e-12
WP_003417458.1|3727198_3728338_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003417461.1|3728334_3729066_+	methyltransferase	NA	NA	NA	NA	NA
WP_096877080.1|3729074_3736646_-	PPE family protein	NA	NA	NA	NA	NA
WP_142283279.1|3736694_3742442_-	PE domain-containing protein	NA	NA	NA	NA	NA
WP_003417619.1|3742872_3743130_-	DUF3017 domain-containing protein	NA	NA	NA	NA	NA
WP_003901612.1|3743385_3752859_-	PPE family protein	NA	NA	NA	NA	NA
WP_049961743.1|3753484_3753931_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_003911006.1|3753967_3754708_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_009938650.1|3755002_3755290_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417738.1|3767019_3767814_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417739.1|3767895_3768267_-	FAD-binding oxidoreductase	NA	A0A0B5JBT9	Pandoravirus	56.4	3.3e-15
WP_157132559.1|3768164_3768383_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417741.1|3768409_3768670_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003417745.1|3768784_3769174_+	DUF732 domain-containing protein	NA	NA	NA	NA	NA
WP_003417749.1|3769187_3769481_-	DUF3017 domain-containing protein	NA	NA	NA	NA	NA
WP_003417751.1|3769477_3770323_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	NA	NA	NA	NA
WP_003417757.1|3770446_3770722_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_003417760.1|3770718_3770976_+	Txe/YoeB family addiction module toxin	NA	NA	NA	NA	NA
WP_003900033.1|3771017_3772208_+	NADH:flavin oxidoreductase	NA	NA	NA	NA	NA
WP_003417765.1|3772324_3772693_+	FHA domain-containing protein	NA	NA	NA	NA	NA
WP_003417767.1|3772689_3773241_-	pentapeptide repeat protein MfpA	NA	NA	NA	NA	NA
WP_003417769.1|3773247_3773829_-	ATP/GTP-binding protein	NA	NA	NA	NA	NA
WP_003417772.1|3773809_3774178_-	DUF742 domain-containing protein	NA	NA	NA	NA	NA
WP_003417776.1|3774155_3774548_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003901616.1|3774544_3777175_-	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_003901617.1|3777410_3777875_+|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	tRNA	NA	NA	NA	NA
WP_010886167.1|3778241_3780008_+	PE family protein	NA	NA	NA	NA	NA
WP_003417881.1|3780008_3780653_-	nitroreductase family protein	NA	NA	NA	NA	NA
WP_003417882.1|3780651_3781086_+	TIGR03667 family PPOX class F420-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003908228.1|3781174_3784414_-	error-prone DNA polymerase DnaE2	NA	A0A1C9LWS4	Streptomyces_phage	32.4	1.6e-118
WP_003900036.1|3784605_3785946_+	wax ester/triacylglycerol synthase family O-acyltransferase	NA	NA	NA	NA	NA
WP_003417892.1|3785987_3787163_+	trehalose-phosphatase	NA	NA	NA	NA	NA
WP_003417895.1|3787216_3787321_+	PE family protein	NA	NA	NA	NA	NA
WP_003900037.1|3787399_3788041_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003417897.1|3788041_3788290_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_003417900.1|3788294_3789722_+	amidase	NA	NA	NA	NA	NA
WP_003417903.1|3789829_3790483_+	HAD family phosphatase	NA	NA	NA	NA	NA
WP_003417905.1|3790521_3792027_-	type B diterpene cyclase	NA	NA	NA	NA	NA
WP_003417908.1|3792031_3792922_-	diterpene synthase	NA	NA	NA	NA	NA
WP_078750126.1|3792930_3794724_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
WP_087902221.1|3794775_3796037_-|transposase	IS3-like element IS987 family transposase	transposase	Q8W6R2	Burkholderia_virus	59.1	9.6e-83
