The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP042274	Agrobacterium tumefaciens strain 186 chromosome Circular, complete sequence	2943916	609359	616737	2943916	protease,tail,head,capsid,portal	Geobacillus_phage(33.33%)	11	NA	NA
WP_099085547.1|609359_610526_+|portal	phage portal protein	portal	W8ECU7	Geobacillus_phage	37.5	1.5e-61
WP_003509186.1|610720_611041_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099085546.1|611069_611678_+|head,protease	HK97 family phage prohead protease	head,protease	A0A0U2BX10	Paracoccus_phage	41.1	1.4e-26
WP_099085545.1|611708_612977_+|capsid	phage major capsid protein	capsid	Q3HQT0	Burkholderia_phage	42.9	6.1e-77
WP_099085544.1|613166_613736_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099085543.1|613739_614075_+|head	phage head closure protein	head	NA	NA	NA	NA
WP_087743622.1|614071_614467_+	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_003509834.1|614474_615674_-	MFS transporter	NA	NA	NA	NA	NA
WP_099086136.1|615764_616172_+|tail	phage major tail protein, TP901-1 family	tail	NA	NA	NA	NA
WP_020809572.1|616171_616531_+	gene transfer agent family protein	NA	NA	NA	NA	NA
WP_099085542.1|616527_616737_+|tail	phage tail assembly chaperone	tail	NA	NA	NA	NA
>prophage 2
NZ_CP042274	Agrobacterium tumefaciens strain 186 chromosome Circular, complete sequence	2943916	1306053	1314706	2943916	tRNA	uncultured_Mediterranean_phage(66.67%)	7	NA	NA
WP_099085371.1|1306053_1307586_+	AMP-binding protein	NA	A0A2K9L3I8	Tupanvirus	23.5	3.3e-21
WP_099085370.1|1309339_1310497_-	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	44.3	3.1e-43
WP_099085369.1|1310533_1311664_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	53.3	6.1e-105
WP_099085368.1|1311663_1312746_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_003503025.1|1313066_1313576_-	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	58.8	1.4e-45
WP_059760168.1|1313612_1314182_-	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	58.5	8.5e-47
WP_003503029.1|1314211_1314706_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	39.0	6.5e-27
>prophage 3
NZ_CP042274	Agrobacterium tumefaciens strain 186 chromosome Circular, complete sequence	2943916	1331172	1339574	2943916	tRNA	uncultured_Mediterranean_phage(75.0%)	9	NA	NA
WP_065695407.1|1331172_1332735_-	LysM peptidoglycan-binding domain-containing M23 family metallopeptidase	NA	I3PV24	Clostridium_phage	30.4	1.1e-11
WP_020012735.1|1333081_1333723_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1J0MC37	Streptomyces_phage	35.1	1.0e-11
WP_003509717.1|1333731_1334502_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	29.8	1.1e-23
WP_003509719.1|1334701_1335985_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	46.0	6.3e-98
WP_003509720.1|1336087_1336891_-	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	41.2	6.8e-42
WP_099085364.1|1336887_1337610_-	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
WP_003509722.1|1337666_1337873_-	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	69.8	2.1e-08
WP_099085363.1|1338001_1338736_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	47.6	1.3e-39
WP_003509724.1|1338725_1339574_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	35.4	1.2e-33
>prophage 4
NZ_CP042274	Agrobacterium tumefaciens strain 186 chromosome Circular, complete sequence	2943916	1362309	1392544	2943916	terminase,tail	Rhizobium_phage(70.37%)	45	NA	NA
WP_099085351.1|1362309_1362636_-	cell wall anchor protein	NA	R9TN87	Rhizobium_phage	90.7	1.6e-42
WP_099085350.1|1362657_1363182_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A068CC96	Rhizobium_phage	77.0	3.5e-79
WP_144030926.1|1363253_1364177_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099085348.1|1364237_1364816_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099085347.1|1364823_1365789_-	hypothetical protein	NA	R9U0V1	Rhizobium_phage	42.2	1.7e-15
WP_099085346.1|1365801_1366509_-	DUF2612 domain-containing protein	NA	L7TKX3	Rhizobium_phage	42.1	1.7e-57
WP_144030925.1|1366510_1367359_-	hypothetical protein	NA	L7TN06	Rhizobium_phage	44.8	5.7e-63
WP_099085344.1|1367406_1367772_-	hypothetical protein	NA	L7TJM2	Rhizobium_phage	60.0	1.4e-31
WP_099085343.1|1367768_1368422_-	hypothetical protein	NA	L7TMF3	Rhizobium_phage	44.8	2.9e-38
WP_099085342.1|1368421_1369303_-	hypothetical protein	NA	L7TRC2	Rhizobium_phage	60.4	1.9e-101
WP_099085341.1|1369283_1369607_-	hypothetical protein	NA	L7TKW4	Rhizobium_phage	61.3	3.0e-33
WP_099085340.1|1369611_1370175_-	hypothetical protein	NA	L7TN02	Rhizobium_phage	53.1	5.7e-43
WP_099085339.1|1370174_1371812_-|tail	phage tail tape measure protein	tail	A0A068C997	Rhizobium_phage	57.9	2.9e-103
WP_099085338.1|1371978_1372437_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144030924.1|1372530_1372785_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099085336.1|1372781_1373261_+	thermonuclease family protein	NA	NA	NA	NA	NA
WP_099085335.1|1373273_1373708_-	DUF3277 family protein	NA	L7TRB4	Rhizobium_phage	56.2	9.4e-38
WP_099085334.1|1373719_1374859_-	DUF3383 family protein	NA	L7TKV9	Rhizobium_phage	56.9	7.3e-114
WP_099085333.1|1374885_1375368_-	hypothetical protein	NA	L7TMZ9	Rhizobium_phage	50.0	1.7e-35
WP_099085332.1|1375364_1375697_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099085331.1|1375693_1376158_-	hypothetical protein	NA	L7TME2	Rhizobium_phage	61.7	2.2e-45
WP_147883359.1|1376157_1376547_-	DUF4054 domain-containing protein	NA	L7TRB1	Rhizobium_phage	51.2	2.5e-26
WP_099085329.1|1376546_1376738_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099085328.1|1376765_1377026_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099085327.1|1377078_1377360_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099085326.1|1377372_1378323_-	DUF2184 domain-containing protein	NA	L7TMZ5	Rhizobium_phage	48.1	2.9e-71
WP_099085325.1|1378337_1378775_-	DUF2190 family protein	NA	L7TJK9	Rhizobium_phage	38.1	5.1e-15
WP_099085324.1|1378774_1379920_-	DUF2213 domain-containing protein	NA	A0A2R3UA67	Siphoviridae_environmental_samples	48.3	1.8e-75
WP_099085323.1|1380065_1380338_+	hypothetical protein	NA	NA	NA	NA	NA
WP_163117927.1|1380334_1381030_-	hypothetical protein	NA	L7TMD0	Rhizobium_phage	52.8	2.2e-60
WP_099085321.1|1381155_1382970_-	DUF1073 domain-containing protein	NA	A0A059VA58	Pseudomonas_phage	53.1	1.1e-167
WP_163117928.1|1382957_1383110_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099085320.1|1383113_1384598_-|terminase	phage terminase large subunit	terminase	A0A1P8VVI4	Erythrobacter_phage	42.7	2.0e-95
WP_099085319.1|1384554_1384929_-	hypothetical protein	NA	NA	NA	NA	NA
WP_144030923.1|1385453_1385861_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144030922.1|1386332_1386581_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086132843.1|1386611_1386956_-	DUF3307 domain-containing protein	NA	F8SJ72	Pseudomonas_phage	41.0	1.2e-16
WP_099085315.1|1387481_1388252_-	hypothetical protein	NA	A0A141GF38	Brucella_phage	40.2	1.3e-42
WP_099085314.1|1388248_1388683_-	hypothetical protein	NA	A0A141GF37	Brucella_phage	68.5	1.9e-54
WP_099085313.1|1388679_1389261_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099085312.1|1389257_1389515_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099085311.1|1389511_1389817_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099085310.1|1389813_1390155_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099085309.1|1390151_1391096_-	hypothetical protein	NA	Q854E1	Mycobacterium_phage	37.1	1.9e-19
WP_099085308.1|1391095_1392544_-	hypothetical protein	NA	A0A141GF34	Brucella_phage	38.2	2.4e-85
>prophage 1
NZ_CP042275	Agrobacterium tumefaciens strain 186 chromosome Linear, complete sequence	2212386	575283	622719	2212386	plate,tail,transposase,capsid,integrase	Ochrobactrum_phage(55.26%)	56	576939:576956	593010:593027
WP_099087367.1|575283_576330_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_099087223.1|576682_577114_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
576939:576956	attL	GTCAAGGCTTTCAGCCGC	NA	NA	NA	NA
WP_099087368.1|577200_578013_+	oxidoreductase	NA	NA	NA	NA	NA
WP_087745780.1|578498_579647_+	enolase	NA	NA	NA	NA	NA
WP_087745782.1|579653_580283_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA	NA
WP_020813147.1|580364_581963_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_112361350.1|582390_583110_-	helix-turn-helix transcriptional regulator	NA	A5X9F5	Aeromonas_virus	35.6	6.4e-31
WP_099087224.1|583358_583664_+	hypothetical protein	NA	NA	NA	NA	NA
WP_163117984.1|583711_584563_+	ParB N-terminal domain-containing protein	NA	A0A219VHB6	Ochrobactrum_phage	28.0	4.2e-05
WP_083532092.1|584616_585024_+	hypothetical protein	NA	G8GWB9	Rhodobacter_phage	65.2	5.9e-42
WP_163117985.1|585020_585194_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099087370.1|585226_587440_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	M4T586	Rhodobacter_phage	36.5	8.9e-108
WP_072493261.1|587502_588261_+	ATP-binding protein	NA	A0A0M4UT94	Ralstonia_phage	34.1	2.2e-10
WP_099087226.1|588260_588896_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099087227.1|588892_589291_+	transcriptional regulator	NA	A0A1B0T6G8	Thiobacimonas_phage	44.3	1.1e-21
WP_144030983.1|589277_589568_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099087229.1|589629_590283_+	DUF3164 family protein	NA	M4STB6	Rhodobacter_phage	64.9	1.2e-73
WP_099087230.1|590290_591058_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099087231.1|591186_591765_+	DNA methyltransferase	NA	F8TVB4	EBPR_siphovirus	48.0	1.4e-44
WP_099087232.1|591761_592412_+	regulatory protein GemA	NA	M4STB3	Rhodobacter_phage	41.3	5.4e-29
WP_099087371.1|592411_592861_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052817262.1|592857_593073_+	hypothetical protein	NA	NA	NA	NA	NA
593010:593027	attR	GCGGCTGAAAGCCTTGAC	NA	NA	NA	NA
WP_099087233.1|593062_593455_+	helix-turn-helix domain-containing protein	NA	A0A219VHE2	Ochrobactrum_phage	61.5	1.8e-32
WP_099087234.1|593554_594523_+	lysozyme	NA	G8GWD3	Rhodobacter_phage	37.9	5.9e-40
WP_099087235.1|594524_595058_+	hypothetical protein	NA	M4SRV1	Rhodobacter_phage	37.3	2.7e-18
WP_003500859.1|595054_595279_+	molecular chaperone DnaK	NA	A0A219VHE0	Ochrobactrum_phage	56.7	2.7e-12
WP_099087372.1|595314_595647_+	DUF2730 family protein	NA	NA	NA	NA	NA
WP_099087236.1|595643_595943_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099087237.1|595945_596575_+	DUF3486 family protein	NA	A0A219VH75	Ochrobactrum_phage	51.4	2.5e-47
WP_099087238.1|596740_598411_+	hypothetical protein	NA	A0A219VH72	Ochrobactrum_phage	63.7	5.7e-192
WP_099087239.1|598410_600030_+	DUF935 domain-containing protein	NA	A0A219VH73	Ochrobactrum_phage	66.6	1.1e-208
WP_099087240.1|600016_601234_+	hypothetical protein	NA	A0A219VH74	Ochrobactrum_phage	58.9	1.3e-137
WP_099087241.1|601569_602667_+	hypothetical protein	NA	A0A219VH76	Ochrobactrum_phage	56.4	4.0e-101
WP_099087242.1|602663_603044_+	hypothetical protein	NA	A0A219VH82	Ochrobactrum_phage	62.8	2.6e-31
WP_099087243.1|603061_604039_+|capsid	capsid protein	capsid	A0A219VH83	Ochrobactrum_phage	61.8	5.8e-112
WP_099087244.1|604637_605057_+	DUF1320 domain-containing protein	NA	A0A219VH93	Ochrobactrum_phage	56.8	5.9e-37
WP_099087245.1|605053_605542_+	virion morphogenesis protein	NA	A0A219VH84	Ochrobactrum_phage	55.8	5.1e-40
WP_099087246.1|606052_606604_+|plate	phage baseplate protein	plate	A0A219VHA3	Ochrobactrum_phage	61.1	2.1e-50
WP_099087247.1|606615_606834_+	hypothetical protein	NA	A0A219VHA0	Ochrobactrum_phage	60.0	8.4e-11
WP_099087248.1|606837_607215_+|plate	baseplate assembly protein	plate	A0A219VH96	Ochrobactrum_phage	64.3	5.7e-39
WP_099087249.1|607211_608150_+|plate	baseplate assembly protein	plate	A0A0A8IKZ9	Aurantimonas_phage	56.5	6.7e-89
WP_099087250.1|608146_608809_+|tail	phage tail protein I	tail	A0A0A8IL57	Aurantimonas_phage	61.3	3.4e-71
WP_099087251.1|608824_611089_+	hypothetical protein	NA	A0A0A8ILB4	Aurantimonas_phage	65.8	4.3e-291
WP_144030984.1|611241_612408_+	hypothetical protein	NA	A0A0A8IK81	Aurantimonas_phage	57.6	5.1e-30
WP_099087253.1|612411_612909_+	hypothetical protein	NA	A0A2L0UYY5	Agrobacterium_phage	50.6	3.7e-14
WP_144030985.1|612934_613753_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099087255.1|613922_615197_+|tail	phage tail protein	tail	A0A219VHA7	Ochrobactrum_phage	72.3	3.8e-172
WP_052817197.1|615206_615725_+|tail	phage tail protein	tail	A0A219VHB2	Ochrobactrum_phage	77.2	2.7e-76
WP_099087256.1|615734_616145_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099087257.1|616259_618581_+|tail	phage tail tape measure protein	tail	A0A219VHB3	Ochrobactrum_phage	29.3	3.1e-34
WP_099087258.1|618577_619009_+|tail	phage tail protein	tail	A0A219VHA8	Ochrobactrum_phage	63.4	7.6e-48
WP_099087259.1|619005_619269_+|tail	phage tail protein	tail	A0A219VHB0	Ochrobactrum_phage	46.5	3.0e-15
WP_099087260.1|619268_620243_+	late control protein	NA	A0A219VHA9	Ochrobactrum_phage	56.7	7.9e-101
WP_099087261.1|620528_621329_+	DNA adenine methylase	NA	R9U1F2	Rhizobium_phage	82.9	6.7e-122
WP_144030986.1|621421_621718_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003506952.1|621960_622719_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.8	8.5e-26
