The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP021371	Rhizobium sp. ACO-34A chromosome, complete genome	4754916	720802	770275	4754916	head,capsid,plate,portal,integrase,tail,terminase	Rhizobium_phage(71.11%)	67	711028:711046	740044:740062
711028:711046	attL	GCTGCGCATCGCCAACGAC	NA	NA	NA	NA
WP_099056486.1|720802_722173_+|integrase	integrase	integrase	NA	NA	NA	NA
WP_099056487.1|722180_722516_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099056488.1|722532_723672_-	phage Gp37/Gp68 family protein	NA	R9TNA8	Rhizobium_phage	65.5	6.5e-147
WP_099059856.1|723674_724094_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099056489.1|724562_725129_-	hypothetical protein	NA	A0A0U1UNM2	Pseudomonas_phage	54.4	5.5e-22
WP_099056490.1|725125_725317_-	hypothetical protein	NA	NA	NA	NA	NA
WP_186363454.1|725306_726014_-	hypothetical protein	NA	B2ZY87	Ralstonia_phage	56.2	1.4e-30
WP_099056491.1|726024_727131_-	DNA polymerase III subunit beta	NA	R9TRR6	Rhizobium_phage	58.9	5.4e-114
WP_099056492.1|727130_727472_-	hypothetical protein	NA	A0A240F4V3	Ochrobactrum_phage	56.8	1.1e-22
WP_099056493.1|727520_728438_-	DUF2303 family protein	NA	A0A291AUR3	Sinorhizobium_phage	56.7	6.1e-95
WP_099056494.1|728465_728825_-	hypothetical protein	NA	R9TQI8	Rhizobium_phage	81.9	2.2e-48
WP_099056495.1|728867_729368_-	single-stranded DNA-binding protein	NA	R9TP78	Rhizobium_phage	59.9	1.2e-47
WP_099056496.1|729367_729727_-	hypothetical protein	NA	NA	NA	NA	NA
WP_186363546.1|729723_729879_-	hypothetical protein	NA	A0A068C9D8	Rhizobium_phage	54.2	4.4e-06
WP_099056497.1|729875_730352_-	hypothetical protein	NA	A0A240F4V2	Ochrobactrum_phage	32.7	3.8e-08
WP_099056498.1|730341_731121_-	hypothetical protein	NA	R9TQJ1	Rhizobium_phage	49.6	3.3e-49
WP_099056499.1|731117_731399_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099056500.1|731395_731617_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099056501.1|731613_731943_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099056502.1|731945_732182_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145959103.1|732504_733008_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099056504.1|733009_733867_+	WYL domain-containing protein	NA	NA	NA	NA	NA
WP_099056505.1|733853_734504_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_099056506.1|734590_734812_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099056507.1|734984_735440_+	hypothetical protein	NA	A0A0A8IL22	Aurantimonas_phage	37.6	7.9e-11
WP_099056508.1|735436_735628_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099056509.1|735624_736197_+	response regulator transcription factor	NA	A0A0B5A598	Paracoccus_phage	37.1	5.1e-07
WP_099056510.1|736193_738884_+	DNA methylase N-4	NA	R9TRS8	Rhizobium_phage	57.4	1.2e-297
WP_099056511.1|738880_739315_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099056512.1|739319_739817_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099056513.1|739813_740134_+	hypothetical protein	NA	R9TQK2	Rhizobium_phage	41.8	6.5e-12
740044:740062	attR	GCTGCGCATCGCCAACGAC	NA	NA	NA	NA
WP_186363455.1|740130_740274_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099056514.1|740263_742144_+	DNA cytosine methyltransferase	NA	A0A223W0A9	Agrobacterium_phage	70.4	1.7e-224
WP_099056515.1|742140_743352_+	phosphoadenosine phosphosulfate reductase family protein	NA	R9TRT5	Rhizobium_phage	72.0	2.7e-175
WP_099056516.1|743361_744636_+	hypothetical protein	NA	R9TNC4	Rhizobium_phage	52.0	6.0e-117
WP_186363456.1|744628_744796_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099056517.1|744788_746597_+	DNA primase family protein	NA	A0A0P0IX98	Lactobacillus_phage	36.5	5.8e-49
WP_099059857.1|746905_747703_+	hypothetical protein	NA	R9TRT9	Rhizobium_phage	46.2	8.5e-61
WP_099056518.1|747889_748423_+|tail	phage tail protein	tail	A0A068CHB9	Rhizobium_phage	75.0	2.3e-70
WP_099056519.1|748595_749246_+	hypothetical protein	NA	A0A291AUL0	Sinorhizobium_phage	34.3	3.6e-17
WP_099056520.1|749242_751222_+|terminase	phage terminase large subunit family protein	terminase	A0A291AUK9	Sinorhizobium_phage	46.2	2.4e-173
WP_099056521.1|751218_752859_+|portal	phage portal protein	portal	R9TN54	Rhizobium_phage	72.7	1.2e-231
WP_099056522.1|752855_753125_+	hypothetical protein	NA	R9TS76	Rhizobium_phage	75.3	1.4e-31
WP_099056523.1|753134_754055_+	S49 family peptidase	NA	A0A068CE01	Rhizobium_phage	61.9	4.1e-107
WP_099056524.1|754202_754643_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099059858.1|754645_755029_+|head	head decoration protein	head	NA	NA	NA	NA
WP_099056525.1|755040_756051_+|capsid	major capsid protein	capsid	Q9JMM2	Wolbachia_phage	35.3	5.4e-44
WP_186363457.1|756149_756545_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099056526.1|756547_756949_+	hypothetical protein	NA	R9TS80	Rhizobium_phage	50.8	1.5e-34
WP_099056527.1|756935_757667_+	hypothetical protein	NA	A0A068C993	Rhizobium_phage	60.1	2.2e-63
WP_186363458.1|757688_757859_+	hypothetical protein	NA	R9TP51	Rhizobium_phage	57.4	1.1e-10
WP_099056528.1|757848_759333_+	hypothetical protein	NA	A0A068CC80	Rhizobium_phage	58.2	1.5e-156
WP_099056529.1|759393_759768_+|tail	phage tail tube protein	tail	R9TN68	Rhizobium_phage	67.2	4.3e-39
WP_099056530.1|759770_760145_+	hypothetical protein	NA	R9TS84	Rhizobium_phage	42.3	4.0e-13
WP_099056531.1|760203_762087_+|tail	phage tail tape measure protein	tail	R9TP54	Rhizobium_phage	59.8	3.5e-161
WP_099056532.1|762104_762563_+	DNA circularization N-terminal domain-containing protein	NA	R9TN75	Rhizobium_phage	69.7	2.4e-52
WP_099056533.1|762562_763186_+	hypothetical protein	NA	R9TS88	Rhizobium_phage	66.0	1.3e-67
WP_099056534.1|763186_764260_+	hypothetical protein	NA	R9TQG2	Rhizobium_phage	64.0	3.0e-125
WP_099056535.1|764256_764676_+|plate	phage baseplate assembly protein	plate	R9TP58	Rhizobium_phage	71.3	1.9e-35
WP_099059859.1|764784_765018_+	hypothetical protein	NA	A0A076G7F1	Sinorhizobium_phage	36.5	9.6e-05
WP_099059860.1|765073_765607_+	phage GP46 family protein	NA	R9TRP7	Rhizobium_phage	70.5	6.1e-71
WP_186363459.1|765578_766658_+|plate	baseplate J/gp47 family protein	plate	R9TN81	Rhizobium_phage	63.5	3.6e-123
WP_099056537.1|766661_767366_+	DUF2313 domain-containing protein	NA	A0A068CH63	Rhizobium_phage	61.3	5.6e-72
WP_099056538.1|767392_768208_+|tail	phage tail protein	tail	R9TQG5	Rhizobium_phage	53.1	5.4e-10
WP_099056539.1|768216_768747_+	hypothetical protein	NA	R9TP62	Rhizobium_phage	48.1	3.6e-23
WP_099056540.1|768730_769612_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_099056541.1|769723_770275_+	hypothetical protein	NA	B4UTR7	Rhizobium_phage	57.9	2.5e-43
>prophage 2
NZ_CP021371	Rhizobium sp. ACO-34A chromosome, complete genome	4754916	1441861	1484333	4754916	capsid,head,protease,tail,portal,transposase	Wolbachia_phage(11.11%)	39	NA	NA
WP_145959126.1|1441861_1442809_+|transposase	transposase	transposase	Q75QL1	Wolbachia_phage	34.4	1.6e-21
WP_099057114.1|1442853_1443645_+	aldolase	NA	NA	NA	NA	NA
WP_099057116.1|1444239_1444716_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_099057117.1|1444728_1446378_-	long-chain-fatty-acid--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	26.0	7.0e-25
WP_099057118.1|1446509_1448273_-	acyl-CoA dehydrogenase C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_099057119.1|1448297_1450595_-	3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_099057120.1|1450597_1451719_-	thiolase family protein	NA	NA	NA	NA	NA
WP_186363489.1|1451811_1453488_-	electron transfer flavoprotein-ubiquinone oxidoreductase	NA	NA	NA	NA	NA
WP_099057122.1|1453919_1454528_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_099059923.1|1454768_1455242_-	VOC family protein	NA	NA	NA	NA	NA
WP_099057123.1|1455297_1455498_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099057124.1|1455854_1456718_-	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
WP_099057125.1|1456870_1458127_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099059924.1|1458341_1458695_+	DUF1491 family protein	NA	NA	NA	NA	NA
WP_099057126.1|1458732_1459788_-	DUF2336 domain-containing protein	NA	NA	NA	NA	NA
WP_099057127.1|1460167_1460359_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099057128.1|1460847_1461396_-	DUF1254 domain-containing protein	NA	NA	NA	NA	NA
WP_099057129.1|1461388_1461976_-	DUF1214 domain-containing protein	NA	NA	NA	NA	NA
WP_145959128.1|1462200_1463169_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099057131.1|1463286_1464483_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_186363490.1|1464692_1466870_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_099057133.1|1467108_1467582_+	YcgN family cysteine cluster protein	NA	NA	NA	NA	NA
WP_099057134.1|1467674_1468736_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099057135.1|1468732_1469257_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145959129.1|1469283_1470135_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A223VZK2	Agrobacterium_phage	33.5	6.0e-20
WP_099059925.1|1470563_1473065_+	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	34.3	5.7e-87
WP_099057137.1|1473137_1473554_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_099059926.1|1473640_1473847_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_099057138.1|1474180_1474531_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_099057139.1|1474850_1475435_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099059927.1|1476225_1477440_+	DNA-packaging protein	NA	A0A0U4IJ26	Arthrobacter_phage	42.3	6.2e-71
WP_099057140.1|1477939_1478560_+	hypothetical protein	NA	A0A0F6WBX9	Sinorhizobium_phage	41.7	3.8e-32
WP_099059928.1|1478762_1479071_+	Dabb family protein	NA	NA	NA	NA	NA
WP_099057141.1|1479142_1480324_+|portal	phage portal protein	portal	W8ECU7	Geobacillus_phage	38.3	2.5e-64
WP_099057142.1|1480594_1480918_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099057143.1|1481270_1481846_+|head,protease	HK97 family phage prohead protease	head,protease	A0A0U2BX10	Paracoccus_phage	47.3	1.1e-28
WP_099059929.1|1481860_1483147_+|capsid	phage major capsid protein	capsid	Q3HQT0	Burkholderia_phage	43.8	8.0e-85
WP_099057144.1|1483425_1483995_+|head,tail	phage head-tail connector protein	head,tail	NA	NA	NA	NA
WP_099057145.1|1483997_1484333_+|head	phage head closure protein	head	NA	NA	NA	NA
>prophage 3
NZ_CP021371	Rhizobium sp. ACO-34A chromosome, complete genome	4754916	2007388	2036252	4754916	capsid,head,protease,tail,terminase	uncultured_Mediterranean_phage(12.5%)	32	NA	NA
WP_099057586.1|2007388_2008795_+|protease	DegQ family serine endoprotease	protease	A0A1B1IT49	uncultured_Mediterranean_phage	28.9	4.1e-18
WP_099057587.1|2008791_2010102_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	40.0	1.3e-77
WP_099057588.1|2010115_2010427_-	DUF1883 domain-containing protein	NA	NA	NA	NA	NA
WP_099057589.1|2010694_2012170_+	diguanylate cyclase	NA	NA	NA	NA	NA
WP_099057590.1|2012376_2012808_+	OsmC family protein	NA	NA	NA	NA	NA
WP_099059979.1|2012940_2013144_+	DUF1059 domain-containing protein	NA	NA	NA	NA	NA
WP_099059980.1|2013550_2013838_-	GIY-YIG nuclease family protein	NA	NA	NA	NA	NA
WP_099059981.1|2014114_2017927_-	vitamin B12-dependent ribonucleotide reductase	NA	A0A1X9SGV9	Bradyrhizobium_phage	53.7	0.0e+00
WP_145959141.1|2018403_2018733_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099057591.1|2018733_2020638_+	methyl-accepting chemotaxis protein	NA	NA	NA	NA	NA
WP_099057592.1|2020805_2021588_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_099057593.1|2021584_2021911_-	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_099057594.1|2021966_2022377_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_099057595.1|2022459_2022957_-	xanthine phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_099057596.1|2023187_2024030_-	universal stress protein	NA	NA	NA	NA	NA
WP_099057597.1|2024125_2024914_-	competence/damage-inducible protein A	NA	NA	NA	NA	NA
WP_099059982.1|2025211_2025808_+	NAD(P)H:quinone oxidoreductase type IV	NA	NA	NA	NA	NA
WP_099057598.1|2025953_2026211_+	PilZ domain-containing protein	NA	NA	NA	NA	NA
WP_145959142.1|2026673_2026871_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099057599.1|2026975_2027215_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_099057600.1|2027442_2027835_-	ORF6N domain-containing protein	NA	A0A0H3UZF1	Geobacillus_virus	55.4	8.3e-09
WP_099057601.1|2027967_2029134_-	hypothetical protein	NA	A0A2D1GNJ4	Pseudomonas_phage	35.4	5.0e-09
WP_099057602.1|2029258_2030188_-	hypothetical protein	NA	NA	NA	NA	NA
WP_186363506.1|2030189_2031842_-|terminase	terminase large subunit	terminase	A0A1X9I6B3	Streptococcus_phage	27.3	2.8e-50
WP_186363507.1|2031801_2032221_-|terminase	phage terminase small subunit P27 family	terminase	NA	NA	NA	NA
WP_099057605.1|2032217_2032556_-|head,tail	head-tail adaptor protein	head,tail	NA	NA	NA	NA
WP_099057606.1|2032592_2033204_-	hypothetical protein	NA	NA	NA	NA	NA
WP_145959143.1|2033381_2033747_-	HNH endonuclease	NA	NA	NA	NA	NA
WP_099057607.1|2033743_2034124_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099057608.1|2034126_2034555_-	hypothetical protein	NA	NA	NA	NA	NA
WP_186363508.1|2034565_2035750_-|capsid	phage major capsid protein	capsid	Q3HQT0	Burkholderia_phage	33.4	7.0e-43
WP_186363509.1|2035754_2036252_-|head,protease	HK97 family phage prohead protease	head,protease	A0A0U2BX10	Paracoccus_phage	35.3	1.4e-13
>prophage 4
NZ_CP021371	Rhizobium sp. ACO-34A chromosome, complete genome	4754916	2085928	2095108	4754916	tRNA	uncultured_Mediterranean_phage(71.43%)	10	NA	NA
WP_099057654.1|2085928_2086798_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	33.9	1.1e-32
WP_099057655.1|2086806_2087544_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	47.5	8.5e-39
WP_099059987.1|2087643_2088750_+	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	30.9	4.3e-10
WP_099057656.1|2088783_2088981_+	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	72.1	9.2e-09
WP_099057657.1|2089031_2089742_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
WP_099057658.1|2089738_2090560_+	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	39.2	5.0e-40
WP_099057659.1|2090675_2091959_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	45.8	7.7e-96
WP_099057660.1|2091975_2092749_+	5'/3'-nucleotidase SurE	NA	NA	NA	NA	NA
WP_099057661.1|2092745_2093399_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	NA	NA	NA	NA
WP_099057662.1|2093542_2095108_+	peptidoglycan DD-metalloendopeptidase family protein	NA	I3PV24	Clostridium_phage	32.5	7.6e-13
>prophage 5
NZ_CP021371	Rhizobium sp. ACO-34A chromosome, complete genome	4754916	2264297	2274503	4754916		uncultured_Mediterranean_phage(66.67%)	9	NA	NA
WP_099057801.1|2264297_2267219_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	61.3	0.0e+00
WP_099057802.1|2267495_2268038_+	single-stranded DNA-binding protein	NA	A0A0K1LLZ9	Caulobacter_phage	76.7	4.0e-46
WP_099057803.1|2268204_2268834_-	MarC family protein	NA	NA	NA	NA	NA
WP_099057804.1|2269021_2271841_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	32.8	2.9e-95
WP_164490805.1|2272260_2272410_-	hypothetical protein	NA	NA	NA	NA	NA
WP_186363514.1|2272490_2272664_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099057805.1|2272864_2273359_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	38.5	6.1e-25
WP_099057806.1|2273391_2273961_+	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	55.2	1.1e-46
WP_099057807.1|2273993_2274503_+	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	60.0	1.3e-46
