assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002741415.1_ASM274141v1	NZ_CP024418	Acinetobacter baumannii strain A388 chromosome, complete genome	1	751751-751837	1	CRISPRCasFinder	no		csa3,cas3,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,WYL	Orphan	AAGATTGATAATCTTTTAATTTTGGC	26	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,WYL	NA|143aa|up_5|NZ_CP024418.1_745773_746202_+,NA|68aa|down_7|NZ_CP024418.1_762539_762743_+,NA|47aa|down_8|NZ_CP024418.1_762925_763066_+	NA|121aa|up_9|NZ_CP024418.1_737989_738352_+	cd17538, REC_D1_PleD-like, first (D1) phosphoacceptor receiver (REC) domain of response regulator PleD and similar domains	NA|179aa|up_8|NZ_CP024418.1_738412_738949_+	COG0835, CheW, Chemotaxis signal transduction protein [Cell motility and secretion / Signal transduction mechanisms]	NA|693aa|up_7|NZ_CP024418.1_738995_741074_+	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|1507aa|up_6|NZ_CP024418.1_741220_745741_+	COG0643, CheA, Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms]	NA|143aa|up_5|NZ_CP024418.1_745773_746202_+	NA	NA|464aa|up_4|NZ_CP024418.1_746457_747849_+	COG0635, HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases [Coenzyme metabolism]	NA|294aa|up_3|NZ_CP024418.1_747856_748738_+	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold	NA|378aa|up_2|NZ_CP024418.1_748875_750009_-	PRK13009, PRK13009, succinyl-diaminopimelate desuccinylase; Reviewed	NA|48aa|up_1|NZ_CP024418.1_750134_750278_-	COG5510, COG5510, Predicted small secreted protein [Function unknown]	NA|303aa|up_0|NZ_CP024418.1_750376_751285_-	pfam08907, DUF1853, Domain of unknown function (DUF1853)	NA|168aa|down_0|NZ_CP024418.1_751908_752412_+	cd16913, YkuD_like, L,D-transpeptidases/carboxypeptidases similar to Bacillus YkuD	NA|262aa|down_1|NZ_CP024418.1_753488_754274_-	cd06259, YdcF-like, YdcF-like	NA|849aa|down_2|NZ_CP024418.1_754400_756947_-	cd06200, SiR_like1, Cytochrome p450- like alpha subunits of E	NA|192aa|down_3|NZ_CP024418.1_757104_757680_-	pfam13630, SdpI, SdpI/YfhL protein family	NA|725aa|down_4|NZ_CP024418.1_757780_759955_-	TIGR01666, Uncharacterized_protein_HI_1680, TIGR01666 family membrane protein	NA|405aa|down_5|NZ_CP024418.1_760082_761297_+	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|235aa|down_6|NZ_CP024418.1_761324_762029_-	cd02136, PnbA_NfnB-like, nitroreductase similar to Mycobacterium smegmatis NfnB	NA|68aa|down_7|NZ_CP024418.1_762539_762743_+	NA	NA|47aa|down_8|NZ_CP024418.1_762925_763066_+	NA	NA|492aa|down_9|NZ_CP024418.1_763165_764641_+	pfam01235, Na_Ala_symp, Sodium:alanine symporter family
GCF_002741415.1_ASM274141v1	NZ_CP024418	Acinetobacter baumannii strain A388 chromosome, complete genome	2	1173172-1176381	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	cas1,cas3f,cas8f,cas5f,cas7f,cas6f	csa3,cas3,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,WYL	Type I-F	GTTCATGGCGGCATACGCCATTTAGAAA,GTTCATGGCGGCATACGCCATTTAGAAA,GTTCATGGCGGCATACGCCATTTAGAAA	28,28,28	0	0	NA	NA	NA:NA:NA	48,53,52	53	TypeI-F	csa3,cas3,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,WYL	NA|211aa|up_8|NZ_CP024418.1_1162096_1162729_+,NA	NA|128aa|up_9|NZ_CP024418.1_1161609_1161993_-	pfam11342, DUF3144, Protein of unknown function (DUF3144)	NA|211aa|up_8|NZ_CP024418.1_1162096_1162729_+	NA	NA|488aa|up_7|NZ_CP024418.1_1162764_1164228_-	cd07756, CYTH-like_Pase_CHAD, Uncharacterized subgroup of the CYTH-like superfamily having an associated CHAD domain	NA|128aa|up_6|NZ_CP024418.1_1164393_1164777_+	pfam06127, DUF962, Protein of unknown function (DUF962)	cas1|322aa|up_5|NZ_CP024418.1_1164899_1165865_+	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	cas3f|1125aa|up_4|NZ_CP024418.1_1165861_1169236_+	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas8f|417aa|up_3|NZ_CP024418.1_1169251_1170502_+	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1)	cas5f|295aa|up_2|NZ_CP024418.1_1170501_1171386_+	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas7f|338aa|up_1|NZ_CP024418.1_1171412_1172426_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|204aa|up_0|NZ_CP024418.1_1172428_1173040_+	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	NA|204aa|down_0|NZ_CP024418.1_1176483_1177095_+	cd00564, TMP_TenI, Thiamine monophosphate synthase (TMP synthase)/TenI	NA|433aa|down_1|NZ_CP024418.1_1177137_1178436_+	PRK00062, PRK00062, glutamate-1-semialdehyde 2,1-aminomutase	NA|235aa|down_2|NZ_CP024418.1_1178497_1179202_+	COG3433, COG3433, Aryl carrier domain [Secondary metabolites biosynthesis, transport, and catabolism]	NA|213aa|down_3|NZ_CP024418.1_1179334_1179973_+	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|946aa|down_4|NZ_CP024418.1_1180117_1182955_+	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|339aa|down_5|NZ_CP024418.1_1183012_1184029_-	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|232aa|down_6|NZ_CP024418.1_1184195_1184891_-	PRK11202, PRK11202, HTH-type transcriptional repressor FabR	NA|357aa|down_7|NZ_CP024418.1_1185031_1186102_+	cd06216, FNR_iron_sulfur_binding_2, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain	NA|365aa|down_8|NZ_CP024418.1_1186114_1187209_+	cd03506, Delta6-FADS-like, The Delta6 Fatty Acid Desaturase (Delta6-FADS)-like CD includes the integral-membrane enzymes: delta-4, delta-5, delta-6, delta-8, delta-8-sphingolipid, and delta-11 desaturases found in vertebrates, higher plants, fungi, and bacteria	NA|155aa|down_9|NZ_CP024418.1_1187242_1187707_-	pfam14539, DUF4442, Domain of unknown function (DUF4442)
GCF_002741415.1_ASM274141v1	NZ_CP024418	Acinetobacter baumannii strain A388 chromosome, complete genome	3	1780783-1780923	3	CRISPRCasFinder	no		csa3,cas3,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,WYL	Orphan	AAAAAACGCCACCTGAGCAAGACAAAGCGACTAAAGCTTTGG	42	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,WYL	NA|82aa|up_9|NZ_CP024418.1_1772666_1772912_-,NA|108aa|up_4|NZ_CP024418.1_1777428_1777752_+,NA|78aa|down_0|NZ_CP024418.1_1781007_1781241_-,NA|120aa|down_1|NZ_CP024418.1_1781456_1781816_+,NA|109aa|down_2|NZ_CP024418.1_1781916_1782243_+	NA|82aa|up_9|NZ_CP024418.1_1772666_1772912_-	NA	NA|140aa|up_8|NZ_CP024418.1_1773171_1773591_-	COG3193, GlcG, Uncharacterized protein, possibly involved in utilization of glycolate and propanediol [General function prediction only]	NA|434aa|up_7|NZ_CP024418.1_1773782_1775084_-	PRK15433, PRK15433, branched-chain amino acid transporter carrier protein BrnQ	NA|265aa|up_6|NZ_CP024418.1_1775436_1776231_+	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|301aa|up_5|NZ_CP024418.1_1776283_1777186_-	cd08473, PBP2_CrgA_like_4, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold	NA|108aa|up_4|NZ_CP024418.1_1777428_1777752_+	NA	NA|114aa|up_3|NZ_CP024418.1_1777798_1778140_-	TIGR00365, TIGR00365, monothiol glutaredoxin, Grx4 family	NA|403aa|up_2|NZ_CP024418.1_1778367_1779576_+	PRK02627, PRK02627, acetylornithine aminotransferase; Provisional	NA|144aa|up_1|NZ_CP024418.1_1779626_1780058_-	cd04623, CBS_pair_bac_euk, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria and eukaryotes	NA|111aa|up_0|NZ_CP024418.1_1780198_1780531_-	pfam11042, DUF2750, Protein of unknown function (DUF2750)	NA|78aa|down_0|NZ_CP024418.1_1781007_1781241_-	NA	NA|120aa|down_1|NZ_CP024418.1_1781456_1781816_+	NA	NA|109aa|down_2|NZ_CP024418.1_1781916_1782243_+	NA	NA|369aa|down_3|NZ_CP024418.1_1782350_1783457_+	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional	NA|199aa|down_4|NZ_CP024418.1_1783645_1784242_+	COG3560, FMR2, Predicted oxidoreductase related to nitroreductase [General function prediction only]	NA|224aa|down_5|NZ_CP024418.1_1784467_1785139_+	pfam09829, DUF2057, Uncharacterized protein conserved in bacteria (DUF2057)	NA|100aa|down_6|NZ_CP024418.1_1785196_1785496_-	pfam09600, Cyd_oper_YbgE, Cyd operon protein YbgE (Cyd_oper_YbgE)	NA|34aa|down_7|NZ_CP024418.1_1785496_1785598_-	pfam08173, YbgT_YccB, Membrane bound YbgT-like protein	NA|382aa|down_8|NZ_CP024418.1_1785611_1786757_-	TIGR00203, ubiquinol_oxidase_subunit_2, cytochrome d oxidase, subunit II (cydB)	NA|529aa|down_9|NZ_CP024418.1_1786753_1788340_-	PRK15097, PRK15097, cytochrome bd-I ubiquinol oxidase subunit CydA
GCF_002741415.1_ASM274141v1	NZ_CP024418	Acinetobacter baumannii strain A388 chromosome, complete genome	4	2075555-2075657	4	CRISPRCasFinder	no		csa3,cas3,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,WYL	Orphan	TCTCGTCTTCTTGCGAAGCTTTAGTC	26	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,WYL	NA,NA	NA|82aa|up_9|NZ_CP024418.1_2066072_2066318_-	COG1146, COG1146, Ferredoxin [Energy production and conversion]	NA|578aa|up_8|NZ_CP024418.1_2066338_2068072_-	PRK08275, PRK08275, putative oxidoreductase; Provisional	NA|248aa|up_7|NZ_CP024418.1_2068100_2068844_-	COG2188, PhnF, Transcriptional regulators [Transcription]	NA|450aa|up_6|NZ_CP024418.1_2069085_2070435_+	TIGR00937, Chromate_transport_protein, chromate transporter, chromate ion transporter (CHR) family	NA|203aa|up_5|NZ_CP024418.1_2070518_2071127_-	PRK00170, PRK00170, azoreductase; Reviewed	NA|132aa|up_4|NZ_CP024418.1_2071222_2071618_+	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|285aa|up_3|NZ_CP024418.1_2071614_2072469_-	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]	NA|306aa|up_2|NZ_CP024418.1_2072635_2073553_+	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|335aa|up_1|NZ_CP024418.1_2073585_2074590_-	PRK06270, PRK06270, homoserine dehydrogenase; Provisional	NA|264aa|up_0|NZ_CP024418.1_2074699_2075491_-	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|552aa|down_0|NZ_CP024418.1_2075684_2077340_-	cd14503, PTP-bact, bacterial tyrosine-protein phosphataseS similar to Neisseria NMA1982	NA|232aa|down_1|NZ_CP024418.1_2077349_2078045_-	cd07724, POD-like_MBL-fold, ETHE1 (PDO type I), persulfide dioxygenase A (PDOA, PDO type II) and related proteins; MBL-fold metallo-hydrolase domain	NA|424aa|down_2|NZ_CP024418.1_2078237_2079509_+	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|304aa|down_3|NZ_CP024418.1_2079578_2080490_+	pfam01062, Bestrophin, Bestrophin, RFP-TM, chloride channel	NA|353aa|down_4|NZ_CP024418.1_2080537_2081596_-	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase	NA|262aa|down_5|NZ_CP024418.1_2081625_2082411_-	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs	NA|468aa|down_6|NZ_CP024418.1_2082437_2083841_-	PRK06416, PRK06416, dihydrolipoamide dehydrogenase; Reviewed	NA|512aa|down_7|NZ_CP024418.1_2083851_2085387_-	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed	NA|340aa|down_8|NZ_CP024418.1_2085388_2086408_-	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]	NA|321aa|down_9|NZ_CP024418.1_2086421_2087384_-	cd02000, TPP_E1_PDC_ADC_BCADC, Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC)
