assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002753995.1_ASM275399v1	NZ_CP024478	Pseudomonas sp. HLS-6 chromosome, complete genome	1	1712449-1712695	1	PILER-CR	no		WYL,csa3,DEDDh,cas3,RT,DinG,TnsE_C	Orphan	ACCCCACCGAAGCCATCGCAGGCAAGCCAGCTCCAAC--AGAGCCCG	47	1	2	1712494-1712549|1712494-1712549	NZ_CP024478.1_1721176-1721231|NZ_CP024478.1_1721880-1721935	NA	2	2	Orphan	WYL,csa3,DEDDh,cas3,RT,DinG,TnsE_C	NA,NA|405aa|down_2|NZ_CP024478.1_1716313_1717528_+,NA|245aa|down_3|NZ_CP024478.1_1717573_1718308_+	NA|282aa|up_9|NZ_CP024478.1_1695729_1696575_-	TIGR02964, conserved_hypothetical_protein, xanthine dehydrogenase accessory protein XdhC	NA|799aa|up_8|NZ_CP024478.1_1696624_1699021_-	TIGR02965, xanthine_dehydrogenase, xanthine dehydrogenase, molybdopterin binding subunit	NA|485aa|up_7|NZ_CP024478.1_1699013_1700468_-	TIGR02963, Includes:_Xanthine_dehydrogenase, xanthine dehydrogenase, small subunit	NA|220aa|up_6|NZ_CP024478.1_1700707_1701367_+	COG1802, GntR, Transcriptional regulators [Transcription]	NA|1163aa|up_5|NZ_CP024478.1_1701369_1704858_+	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|293aa|up_4|NZ_CP024478.1_1705062_1705941_+	PRK00269, zipA, cell division protein ZipA; Reviewed	NA|789aa|up_3|NZ_CP024478.1_1706181_1708548_+	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated	NA|690aa|up_2|NZ_CP024478.1_1708953_1711023_+	PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated	NA|109aa|up_1|NZ_CP024478.1_1711093_1711420_+	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein	NA|156aa|up_0|NZ_CP024478.1_1711711_1712179_+	pfam04449, Fimbrial_CS1, CS1 type fimbrial major subunit	NA|155aa|down_0|NZ_CP024478.1_1713110_1713575_+	pfam04449, Fimbrial_CS1, CS1 type fimbrial major subunit	NA|846aa|down_1|NZ_CP024478.1_1713744_1716282_+	pfam15976, CooC_C, CS1-pili formation C-terminal	NA|405aa|down_2|NZ_CP024478.1_1716313_1717528_+	NA	NA|245aa|down_3|NZ_CP024478.1_1717573_1718308_+	NA	NA|153aa|down_4|NZ_CP024478.1_1718408_1718867_+	pfam04449, Fimbrial_CS1, CS1 type fimbrial major subunit	NA|243aa|down_5|NZ_CP024478.1_1719073_1719802_+	PRK15308, PRK15308, fimbrial protein TcfA	NA|201aa|down_6|NZ_CP024478.1_1719900_1720503_+	PRK00076, recR, recombination protein RecR; Reviewed	NA|152aa|down_7|NZ_CP024478.1_1723623_1724079_-	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|183aa|down_8|NZ_CP024478.1_1724136_1724685_-	PRK02304, PRK02304, adenine phosphoribosyltransferase; Provisional	NA|245aa|down_9|NZ_CP024478.1_1724741_1725476_-	PRK11161, PRK11161, fumarate/nitrate reduction transcriptional regulator Fnr
GCF_002753995.1_ASM275399v1	NZ_CP024478	Pseudomonas sp. HLS-6 chromosome, complete genome	2	3088462-3088852	2	PILER-CR	no		WYL,csa3,DEDDh,cas3,RT,DinG,TnsE_C	Orphan	ACTGACACCCCGCCGATGCCATCGCAGGCAAGCCTGCTCCAACAGAAAGGCAGTG	55	1	1	3088629-3088685	NZ_CP024478.1_3088068-3088124	NA	3	3	Orphan	WYL,csa3,DEDDh,cas3,RT,DinG,TnsE_C	NA,NA	NA|353aa|up_9|NZ_CP024478.1_3077736_3078795_-	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|388aa|up_8|NZ_CP024478.1_3078805_3079969_-	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|251aa|up_7|NZ_CP024478.1_3079978_3080731_-	PRK07938, PRK07938, enoyl-CoA hydratase family protein	NA|375aa|up_6|NZ_CP024478.1_3080727_3081852_-	cd04730, NPD_like, 2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites	NA|306aa|up_5|NZ_CP024478.1_3081848_3082766_-	PRK08290, PRK08290, enoyl-CoA hydratase; Provisional	NA|266aa|up_4|NZ_CP024478.1_3082782_3083580_-	COG2057, AtoA, Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit [Lipid metabolism]	NA|292aa|up_3|NZ_CP024478.1_3083592_3084468_-	COG1788, AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit [Lipid metabolism]	NA|297aa|up_2|NZ_CP024478.1_3084479_3085370_-	TIGR03213, Biphenyl-23-diol_12-dioxygenase_1, 2,3-dihydroxybiphenyl 1,2-dioxygenase	NA|391aa|up_1|NZ_CP024478.1_3085572_3086745_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|398aa|up_0|NZ_CP024478.1_3086741_3087935_+	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|210aa|down_0|NZ_CP024478.1_3088928_3089558_-	pfam13577, SnoaL_4, SnoaL-like domain	NA|258aa|down_1|NZ_CP024478.1_3089563_3090337_-	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG	NA|245aa|down_2|NZ_CP024478.1_3090351_3091086_-	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated	NA|278aa|down_3|NZ_CP024478.1_3091355_3092189_+	TIGR03343, 2-hydroxy-6-oxo-6-phenylhexa-24-dienoate_hydrolase, 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase	NA|411aa|down_4|NZ_CP024478.1_3092298_3093531_-	cd02803, OYE_like_FMN_family, Old yellow enzyme (OYE)-like FMN binding domain	NA|554aa|down_5|NZ_CP024478.1_3093610_3095272_-	pfam06980, DUF1302, Protein of unknown function (DUF1302)	NA|536aa|down_6|NZ_CP024478.1_3095371_3096979_-	PRK07656, PRK07656, long-chain-fatty-acid--CoA ligase; Validated	NA|341aa|down_7|NZ_CP024478.1_3096999_3098022_-	cd06214, PA_degradation_oxidoreductase_like, NAD(P) binding domain of ferredoxin reductase like phenylacetic acid (PA) degradation oxidoreductase	NA|396aa|down_8|NZ_CP024478.1_3098100_3099288_-	cd01159, NcnH, Naphthocyclinone hydroxylase	NA|258aa|down_9|NZ_CP024478.1_3099514_3100288_+	PRK07814, PRK07814, SDR family oxidoreductase
GCF_002753995.1_ASM275399v1	NZ_CP024478	Pseudomonas sp. HLS-6 chromosome, complete genome	3	3851438-3851545	1	CRISPRCasFinder	no		WYL,csa3,DEDDh,cas3,RT,DinG,TnsE_C	Orphan	ATGCAGACGCCGCGAACTTACTGACACC	28	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,DEDDh,cas3,RT,DinG,TnsE_C	NA|107aa|up_4|NZ_CP024478.1_3846527_3846848_-,NA	NA|460aa|up_9|NZ_CP024478.1_3840187_3841567_-	TIGR03023, Sugar_transferase	NA|476aa|up_8|NZ_CP024478.1_3841709_3843137_-	TIGR01479, Mannose-1-phosphate_guanylyltransferase, mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA|403aa|up_7|NZ_CP024478.1_3843224_3844433_-	PRK10307, PRK10307, colanic acid biosynthesis glycosyltransferase WcaI	NA|326aa|up_6|NZ_CP024478.1_3844432_3845410_-	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs	NA|373aa|up_5|NZ_CP024478.1_3845412_3846531_-	COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]	NA|107aa|up_4|NZ_CP024478.1_3846527_3846848_-	NA	NA|162aa|up_3|NZ_CP024478.1_3846847_3847333_-	COG3765, WzzB, Chain length determinant protein [Cell envelope biogenesis, outer membrane]	NA|494aa|up_2|NZ_CP024478.1_3848993_3850475_-	COG1236, YSH1, Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Translation, ribosomal structure and biogenesis]	NA|81aa|up_1|NZ_CP024478.1_3850620_3850863_-	pfam06305, LapA_dom, Lipopolysaccharide assembly protein A domain	NA|98aa|up_0|NZ_CP024478.1_3850887_3851181_-	PRK00199, ihfB, integration host factor subunit beta; Reviewed	NA|559aa|down_0|NZ_CP024478.1_3851658_3853335_-	PRK06299, rpsA, 30S ribosomal protein S1; Reviewed	NA|230aa|down_1|NZ_CP024478.1_3853457_3854147_-	PRK00023, cmk, (d)CMP kinase	NA|747aa|down_2|NZ_CP024478.1_3854143_3856384_-	PRK14806, PRK14806, bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional	NA|365aa|down_3|NZ_CP024478.1_3856424_3857519_-	COG0077, PheA, Prephenate dehydratase [Amino acid transport and metabolism]	NA|362aa|down_4|NZ_CP024478.1_3857518_3858604_-	PRK05355, PRK05355, 3-phosphoserine/phosphohydroxythreonine transaminase	NA|886aa|down_5|NZ_CP024478.1_3858697_3861355_-	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|359aa|down_6|NZ_CP024478.1_3861624_3862701_-	PRK05720, mtnA, methylthioribose-1-phosphate isomerase; Reviewed	NA|444aa|down_7|NZ_CP024478.1_3862809_3864141_+	PRK09045, PRK09045, TRZ/ATZ family hydrolase	NA|233aa|down_8|NZ_CP024478.1_3864201_3864900_+	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|224aa|down_9|NZ_CP024478.1_3864902_3865574_+	PRK13222, PRK13222, N-acetylmuramic acid 6-phosphate phosphatase MupP
GCF_002753995.1_ASM275399v1	NZ_CP024478	Pseudomonas sp. HLS-6 chromosome, complete genome	4	4818613-4818863	3	PILER-CR	no		WYL,csa3,DEDDh,cas3,RT,DinG,TnsE_C	Orphan	TCACCCCACCGACGTCATCGCAGGCAAGCCAGCTCCAAC--AAAGCCCGCGC	52	1	1	4818663-4818713	NZ_CP024478.1_1908485-1908435	NA	2	2	Orphan	WYL,csa3,DEDDh,cas3,RT,DinG,TnsE_C	NA,NA	NA|446aa|up_9|NZ_CP024478.1_4809222_4810560_-	PRK11715, PRK11715, cell envelope integrity protein CreD	NA|478aa|up_8|NZ_CP024478.1_4810656_4812090_-	PRK11100, PRK11100, sensory histidine kinase CreC; Provisional	NA|227aa|up_7|NZ_CP024478.1_4812089_4812770_-	PRK11083, PRK11083, DNA-binding response regulator CreB; Provisional	NA|168aa|up_6|NZ_CP024478.1_4812950_4813454_-	COG4067, COG4067, Uncharacterized protein conserved in archaea [Posttranslational modification, protein turnover, chaperones]	NA|296aa|up_5|NZ_CP024478.1_4813633_4814521_+	PRK14014, PRK14014, putative acyltransferase; Provisional	NA|386aa|up_4|NZ_CP024478.1_4814522_4815680_-	pfam03738, GSP_synth, Glutathionylspermidine synthase preATP-grasp	NA|235aa|up_3|NZ_CP024478.1_4815689_4816394_-	COG5463, COG5463, Predicted integral membrane protein [Function unknown]	NA|143aa|up_2|NZ_CP024478.1_4816409_4816838_-	COG3766, COG3766, Predicted membrane protein [Function unknown]	NA|190aa|up_1|NZ_CP024478.1_4816912_4817482_-	pfam11075, DUF2780, Protein of unknown function VcgC/VcgE (DUF2780)	NA|105aa|up_0|NZ_CP024478.1_4817579_4817894_-	pfam11275, DUF3077, Protein of unknown function (DUF3077)	NA|400aa|down_0|NZ_CP024478.1_4818996_4820196_-	TIGR02819, formaldehyde_dehydrogenase_glutathione-independent, formaldehyde dehydrogenase, glutathione-independent	NA|286aa|down_1|NZ_CP024478.1_4820293_4821151_-	PRK13011, PRK13011, formyltetrahydrofolate deformylase; Reviewed	NA|211aa|down_2|NZ_CP024478.1_4821170_4821803_-	pfam04268, SoxG, Sarcosine oxidase, gamma subunit family	NA|1006aa|down_3|NZ_CP024478.1_4821886_4824904_-	TIGR01372, sarcosine_oxidase_alpha_subunit, sarcosine oxidase, alpha subunit family, heterotetrameric form	NA|110aa|down_4|NZ_CP024478.1_4824900_4825230_-	pfam04267, SoxD, Sarcosine oxidase, delta subunit family	NA|417aa|down_5|NZ_CP024478.1_4825245_4826496_-	TIGR01373, Sarcosine_oxidase_subunit_beta, sarcosine oxidase, beta subunit family, heterotetrameric form	NA|418aa|down_6|NZ_CP024478.1_4826517_4827771_-	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed	NA|347aa|down_7|NZ_CP024478.1_4828066_4829107_+	COG2008, GLY1, Threonine aldolase [Amino acid transport and metabolism]	NA|645aa|down_8|NZ_CP024478.1_4829119_4831054_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|101aa|down_9|NZ_CP024478.1_4831281_4831584_-	pfam05164, ZapA, Cell division protein ZapA
GCF_002753995.1_ASM275399v1	NZ_CP024478	Pseudomonas sp. HLS-6 chromosome, complete genome	5	4866325-4866462	2	CRISPRCasFinder	no		WYL,csa3,DEDDh,cas3,RT,DinG,TnsE_C	Orphan	GTGTCAGTAAGTTCGCGGTGCCTGCATCGCGGGCAAGACCCGCTCC	46	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,DEDDh,cas3,RT,DinG,TnsE_C	NA|148aa|up_0|NZ_CP024478.1_4865825_4866269_+,NA|120aa|down_6|NZ_CP024478.1_4873791_4874151_+,NA|106aa|down_7|NZ_CP024478.1_4874645_4874963_-,NA|326aa|down_8|NZ_CP024478.1_4875065_4876043_-,NA|237aa|down_9|NZ_CP024478.1_4876015_4876726_-	NA|87aa|up_9|NZ_CP024478.1_4856649_4856910_-	pfam09932, DUF2164, Uncharacterized conserved protein (DUF2164)	NA|213aa|up_8|NZ_CP024478.1_4856909_4857548_-	PRK13146, hisH, imidazole glycerol phosphate synthase subunit HisH; Provisional	NA|198aa|up_7|NZ_CP024478.1_4857547_4858141_-	PRK00951, hisB, imidazoleglycerol-phosphate dehydratase HisB	NA|553aa|up_6|NZ_CP024478.1_4858328_4859987_-	cd17353, MFS_OFA_like, Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of transporters	NA|136aa|up_5|NZ_CP024478.1_4860210_4860618_+	pfam12568, DUF3749, Acetyltransferase (GNAT) domain	NA|746aa|up_4|NZ_CP024478.1_4860709_4862947_+	pfam05170, AsmA, AsmA family	NA|356aa|up_3|NZ_CP024478.1_4862943_4864011_+	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair]	NA|91aa|up_2|NZ_CP024478.1_4864007_4864280_+	PRK05408, PRK05408, oxidative damage protection protein; Provisional	NA|299aa|up_1|NZ_CP024478.1_4864827_4865724_+	TIGR03707, PPK2_P_aer, polyphosphate kinase 2, PA0141 family	NA|148aa|up_0|NZ_CP024478.1_4865825_4866269_+	NA	NA|466aa|down_0|NZ_CP024478.1_4866522_4867920_-	TIGR01773, GABA_permease, gamma-aminobutyrate permease	NA|258aa|down_1|NZ_CP024478.1_4868520_4869294_+	COG4598, HisP, ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]	NA|251aa|down_2|NZ_CP024478.1_4869307_4870060_+	cd13702, PBP2_mlr5654_like, Substrate binding domain of ABC-type histidine/lysine/arginine/ornithine transporter-like; the type 2 periplasmic-binding protein fold	NA|232aa|down_3|NZ_CP024478.1_4870116_4870812_+	COG4215, ArtQ, ABC-type arginine transport system, permease component [Amino acid transport and metabolism]	NA|230aa|down_4|NZ_CP024478.1_4870808_4871498_+	COG4160, ArtM, ABC-type arginine/histidine transport system, permease component [Amino acid transport and metabolism]	NA|422aa|down_5|NZ_CP024478.1_4871478_4872744_+	pfam13679, Methyltransf_32, Methyltransferase domain	NA|120aa|down_6|NZ_CP024478.1_4873791_4874151_+	NA	NA|106aa|down_7|NZ_CP024478.1_4874645_4874963_-	NA	NA|326aa|down_8|NZ_CP024478.1_4875065_4876043_-	NA	NA|237aa|down_9|NZ_CP024478.1_4876015_4876726_-	NA
