assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002754815.1_ASM275481v1	NZ_CP024588	Roseomonas sp. FDAARGOS_362 chromosome, complete genome	1	679603-679694	1	CRISPRCasFinder	no	csa3	DinG,csa3,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,DEDDh	Type I-A	CAGTGCTGCATCATCTGCTGCAT	23	0	0	NA	NA	NA	1	1	Orphan	DinG,csa3,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,DEDDh	NA,NA	NA|457aa|up_9|NZ_CP024588.1_669569_670940_-	NF033203, entero_EhxA, enterohemolysin EhxA	NA|111aa|up_8|NZ_CP024588.1_671115_671448_-	cd08026, DUF326, Cysteine-rich 4 helical bundle widely conserved in bacteria	NA|91aa|up_7|NZ_CP024588.1_672229_672502_-	pfam11666, DUF2933, Protein of unknown function (DUF2933)	NA|297aa|up_6|NZ_CP024588.1_672679_673570_-	COG1276, PcoD, Putative copper export protein [Inorganic ion transport and metabolism]	NA|126aa|up_5|NZ_CP024588.1_673566_673944_-	pfam04234, CopC, CopC domain	NA|129aa|up_4|NZ_CP024588.1_674101_674488_-	COG3544, COG3544, Uncharacterized protein conserved in bacteria [Function unknown]	NA|453aa|up_3|NZ_CP024588.1_674613_675972_-	PRK09467, envZ, osmolarity sensor protein; Provisional	NA|245aa|up_2|NZ_CP024588.1_675959_676694_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|797aa|up_1|NZ_CP024588.1_676779_679170_-	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B	NA|67aa|up_0|NZ_CP024588.1_679328_679529_+	cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones	NA|160aa|down_0|NZ_CP024588.1_680137_680617_-	COG3019, COG3019, Predicted metal-binding protein [General function prediction only]	NA|412aa|down_1|NZ_CP024588.1_680621_681857_-	PRK09467, envZ, osmolarity sensor protein; Provisional	NA|257aa|down_2|NZ_CP024588.1_681853_682624_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|253aa|down_3|NZ_CP024588.1_682786_683545_-	pfam05275, CopB, Copper resistance protein B precursor (CopB)	NA|644aa|down_4|NZ_CP024588.1_683550_685482_-	TIGR01480, unnamed_protein_product, copper-resistance protein, CopA family	NA|193aa|down_5|NZ_CP024588.1_685528_686107_-	cd04211, Cupredoxin_like_2, Uncharacterized Cupredoxin-like subfamily	csa3|118aa|down_6|NZ_CP024588.1_686340_686694_+	pfam12840, HTH_20, Helix-turn-helix domain	NA|142aa|down_7|NZ_CP024588.1_686690_687116_+	PRK10026, PRK10026, arsenate reductase (glutaredoxin)	NA|438aa|down_8|NZ_CP024588.1_687224_688538_+	PRK15445, PRK15445, arsenical efflux pump membrane protein ArsB	NA|357aa|down_9|NZ_CP024588.1_688534_689605_+	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]
GCF_002754815.1_ASM275481v1	NZ_CP024588	Roseomonas sp. FDAARGOS_362 chromosome, complete genome	2	1970838-1973778	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas4,cas7,cas8c,cas5,cas3	DinG,csa3,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,DEDDh	Type I-U,Type I-C, Type I-U?	GTTTCGATCCACGCTCCCGCACGGGGAGCGA,GTTTCGATCCACGCTCCCGCACGGGGAGCGAC,GTTTCGATCCACGCTCCCGCACGGGGAGCGAC	31,32,32	0	0	NA	NA	NA:I-C:I-C	44,44,44	44	TypeI-U,TypeI-C,TypeI-U?	DinG,csa3,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,DEDDh	NA|69aa|up_3|NZ_CP024588.1_1964559_1964766_+,NA	NA|1101aa|up_9|NZ_CP024588.1_1949277_1952580_+	cd11344, AmyAc_GlgE_like, Alpha amylase catalytic domain found in GlgE-like proteins	NA|1085aa|up_8|NZ_CP024588.1_1952596_1955851_+	TIGR02456, Trehalose_synthase, trehalose synthase	NA|737aa|up_7|NZ_CP024588.1_1955840_1958051_+	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB	NA|703aa|up_6|NZ_CP024588.1_1958034_1960143_+	TIGR02100, Glycogen_operon_protein_GlgX_homolog, glycogen debranching enzyme GlgX	NA|607aa|up_5|NZ_CP024588.1_1960139_1961960_+	TIGR02402, Malto-oligosyltrehalose_trehalohydrolase, malto-oligosyltrehalose trehalohydrolase	NA|703aa|up_4|NZ_CP024588.1_1961956_1964065_+	PRK14507, PRK14507, malto-oligosyltrehalose synthase	NA|69aa|up_3|NZ_CP024588.1_1964559_1964766_+	NA	NA|170aa|up_2|NZ_CP024588.1_1965136_1965646_+	pfam05974, DUF892, Domain of unknown function (DUF892)	NA|169aa|up_1|NZ_CP024588.1_1966020_1966527_+	cd07909, YciF, YciF bacterial stress response protein, ferritin-like iron-binding domain	NA|397aa|up_0|NZ_CP024588.1_1968703_1969893_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|335aa|down_0|NZ_CP024588.1_1974226_1975231_-	cd01182, INT_RitC_C_like, C-terminal catalytic domain of recombinase RitC, a component of the recombinase trio	NA|455aa|down_1|NZ_CP024588.1_1975227_1976592_-	cd00797, INT_RitB_C_like, C-terminal catalytic domain of recombinase RitB, a component of the recombinase trio	NA|411aa|down_2|NZ_CP024588.1_1976591_1977824_-	cd01188, INT_RitA_C_like, C-terminal catalytic domain of recombinase RitA, a component of the recombinase trio	cas2|97aa|down_3|NZ_CP024588.1_1979190_1979481_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|347aa|down_4|NZ_CP024588.1_1979490_1980531_-	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas4|215aa|down_5|NZ_CP024588.1_1980535_1981180_-	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas7|313aa|down_6|NZ_CP024588.1_1981190_1982129_-	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas8c|597aa|down_7|NZ_CP024588.1_1982121_1983912_-	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas5|226aa|down_8|NZ_CP024588.1_1983908_1984586_-	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas3|752aa|down_9|NZ_CP024588.1_1984783_1987039_-	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3
GCF_002754815.1_ASM275481v1	NZ_CP024588	Roseomonas sp. FDAARGOS_362 chromosome, complete genome	3	2407335-2407433	3	CRISPRCasFinder	no		DinG,csa3,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,DEDDh	Orphan	GAGCGAGGCCGAGCGGAAGATCGC	24	0	0	NA	NA	NA	1	1	Orphan	DinG,csa3,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,DEDDh	NA,NA|152aa|down_7|NZ_CP024588.1_2419150_2419606_+,NA|92aa|down_8|NZ_CP024588.1_2419602_2419878_+,NA|98aa|down_9|NZ_CP024588.1_2419874_2420168_+	NA|326aa|up_9|NZ_CP024588.1_2389567_2390545_-	COG3386, COG3386, Gluconolactonase [Carbohydrate transport and metabolism]	NA|428aa|up_8|NZ_CP024588.1_2390819_2392103_-	cd03896, M20_PAAh_like, M20 Peptidases, Poly(aspartic acid) hydrolase-like proteins	NA|229aa|up_7|NZ_CP024588.1_2392279_2392966_-	pfam13483, Lactamase_B_3, Beta-lactamase superfamily domain	NA|469aa|up_6|NZ_CP024588.1_2393139_2394546_+	PRK09225, PRK09225, threonine synthase; Validated	NA|612aa|up_5|NZ_CP024588.1_2397623_2399459_+	cd01115, SLC13_permease, Permease SLC13 (solute carrier 13)	NA|63aa|up_4|NZ_CP024588.1_2399690_2399879_+	COG3609, COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain [Transcription]	NA|979aa|up_3|NZ_CP024588.1_2399871_2402808_+	PRK13557, PRK13557, histidine kinase; Provisional	NA|198aa|up_2|NZ_CP024588.1_2402939_2403533_+	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|422aa|up_1|NZ_CP024588.1_2403684_2404950_+	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only]	NA|451aa|up_0|NZ_CP024588.1_2404973_2406326_+	COG0312, TldD, Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only]	NA|1260aa|down_0|NZ_CP024588.1_2408215_2411995_+	cd03809, GT4_MtfB-like, glycosyltransferases MtfB, WbpX, and similar proteins	NA|390aa|down_1|NZ_CP024588.1_2412070_2413240_-	cd08194, Fe-ADH-like, Iron-containing alcohol dehydrogenases-like	NA|86aa|down_2|NZ_CP024588.1_2413419_2413677_-	COG2261, COG2261, Predicted membrane protein [Function unknown]	NA|408aa|down_3|NZ_CP024588.1_2413819_2415043_-	TIGR03862, flavo_PP4765, uncharacterized flavoprotein, PP_4765 family	NA|562aa|down_4|NZ_CP024588.1_2415093_2416779_-	cd09606, M3B_PepF, Peptidase family M3B, oligopeptidase F (PepF)	NA|434aa|down_5|NZ_CP024588.1_2416830_2418132_-	cd10231, YegD_like, Escherichia coli YegD, a putative chaperone protein, and related proteins	NA|218aa|down_6|NZ_CP024588.1_2418315_2418969_+	cd03189, GST_C_GTT1_like, C-terminal, alpha helical domain of GTT1-like Glutathione S-transferases	NA|152aa|down_7|NZ_CP024588.1_2419150_2419606_+	NA	NA|92aa|down_8|NZ_CP024588.1_2419602_2419878_+	NA	NA|98aa|down_9|NZ_CP024588.1_2419874_2420168_+	NA
GCF_002754815.1_ASM275481v1	NZ_CP024585	Roseomonas sp. FDAARGOS_362 plasmid unnamed, complete sequence	1	3506-3599	1	CRISPRCasFinder	no			Orphan	GGTGGACACCCTGGACACCTTGG	23	0	0	NA	NA	NA	1	1	Orphan	DinG,csa3,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,DEDDh	NA|120aa|up_2|NZ_CP024585.1_1464_1824_-,NA|86aa|up_0|NZ_CP024585.1_2780_3038_+,NA|87aa|down_1|NZ_CP024585.1_6094_6355_-,NA|182aa|down_2|NZ_CP024585.1_6351_6897_-,NA|74aa|down_3|NZ_CP024585.1_7037_7259_-,NA|221aa|down_4|NZ_CP024585.1_7259_7922_-,NA|133aa|down_6|NZ_CP024585.1_8405_8804_-	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|170aa|up_3|NZ_CP024585.1_958_1468_-	COG4626, COG4626, Phage terminase-like protein, large subunit [General function prediction only]	NA|120aa|up_2|NZ_CP024585.1_1464_1824_-	NA	NA|187aa|up_1|NZ_CP024585.1_1987_2548_-	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|86aa|up_0|NZ_CP024585.1_2780_3038_+	NA	NA|778aa|down_0|NZ_CP024585.1_3612_5946_-	PRK07078, PRK07078, hypothetical protein; Validated	NA|87aa|down_1|NZ_CP024585.1_6094_6355_-	NA	NA|182aa|down_2|NZ_CP024585.1_6351_6897_-	NA	NA|74aa|down_3|NZ_CP024585.1_7037_7259_-	NA	NA|221aa|down_4|NZ_CP024585.1_7259_7922_-	NA	NA|67aa|down_5|NZ_CP024585.1_8126_8327_-	pfam12728, HTH_17, Helix-turn-helix domain	NA|133aa|down_6|NZ_CP024585.1_8405_8804_-	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
