assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002759355.1_ASM275935v1	NZ_CP020992	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP4885 chromosome, complete genome	1	1051189-1051340	1	CRISPRCasFinder	no		DinG,WYL,csa3,DEDDh,cas3	Orphan	CGCCTCAGCAGCCCGAGGCGAGCGCAGTCCCAGCCGCGGCGCCGCGCGCCGG	52	0	0	NA	NA	NA	1	1	Orphan	DinG,WYL,csa3,DEDDh,cas3	NA,NA	NA|259aa|up_9|NZ_CP020992.1_1034422_1035199_+	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|870aa|up_8|NZ_CP020992.1_1035195_1037805_+	PRK04374, PRK04374, [protein-PII] uridylyltransferase	NA|401aa|up_7|NZ_CP020992.1_1037827_1039030_+	PRK11830, dapD, 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Provisional	NA|119aa|up_6|NZ_CP020992.1_1039218_1039575_+	cd03035, ArsC_Yffb, Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC	NA|377aa|up_5|NZ_CP020992.1_1039812_1040943_+	PRK13009, PRK13009, succinyl-diaminopimelate desuccinylase; Reviewed	NA|565aa|up_4|NZ_CP020992.1_1041236_1042931_+	PRK09431, asnB, asparagine synthetase B; Provisional	NA|351aa|up_3|NZ_CP020992.1_1042998_1044051_-	pfam13229, Beta_helix, Right handed beta helix region	NA|713aa|up_2|NZ_CP020992.1_1044496_1046635_-	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|179aa|up_1|NZ_CP020992.1_1049566_1050103_+	cd00907, Bacterioferritin, Bacterioferritin, ferritin-like diiron-binding domain	NA|219aa|up_0|NZ_CP020992.1_1050369_1051026_-	PRK13255, PRK13255, thiopurine S-methyltransferase; Reviewed	NA|748aa|down_0|NZ_CP020992.1_1051355_1053599_-	PRK05561, PRK05561, DNA topoisomerase 4 subunit A	NA|284aa|down_1|NZ_CP020992.1_1053660_1054512_-	cd06124, cupin_NimR-like_N, AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain	NA|147aa|down_2|NZ_CP020992.1_1054634_1055075_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|506aa|down_3|NZ_CP020992.1_1055071_1056589_+	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family	NA|398aa|down_4|NZ_CP020992.1_1056599_1057793_+	PRK15136, PRK15136, multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	NA|527aa|down_5|NZ_CP020992.1_1057799_1059380_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|730aa|down_6|NZ_CP020992.1_1059821_1062011_-	COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism]	NA|590aa|down_7|NZ_CP020992.1_1062188_1063958_-	cd06241, M14-like, Peptidase M14-like domain; uncharacterized subgroup	NA|522aa|down_8|NZ_CP020992.1_1064321_1065887_+	cd17347, MFS_SLC15A1_2_like, Solute carrier family 15 members 1 and 2, and similar Major Facilitator Superfamily transporters	NA|203aa|down_9|NZ_CP020992.1_1065894_1066503_+	COG0705, COG0705, Membrane associated serine protease [Amino acid transport and metabolism]
GCF_002759355.1_ASM275935v1	NZ_CP020992	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP4885 chromosome, complete genome	2	2333574-2333663	2	CRISPRCasFinder	no		DinG,WYL,csa3,DEDDh,cas3	Orphan	GTTGATGTCGTTGCCGGCGCTGA	23	0	0	NA	NA	NA	1	1	Orphan	DinG,WYL,csa3,DEDDh,cas3	NA|63aa|up_8|NZ_CP020992.1_2320224_2320413_-,NA|129aa|up_6|NZ_CP020992.1_2325523_2325910_-,NA|136aa|up_5|NZ_CP020992.1_2326086_2326494_-,NA|203aa|up_4|NZ_CP020992.1_2326490_2327099_-,NA|95aa|up_2|NZ_CP020992.1_2328185_2328470_-,NA	NA|328aa|up_9|NZ_CP020992.1_2319201_2320185_-	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair]	NA|63aa|up_8|NZ_CP020992.1_2320224_2320413_-	NA	NA|117aa|up_7|NZ_CP020992.1_2324804_2325155_+	pfam08845, SymE_toxin, Toxin SymE, type I toxin-antitoxin system	NA|129aa|up_6|NZ_CP020992.1_2325523_2325910_-	NA	NA|136aa|up_5|NZ_CP020992.1_2326086_2326494_-	NA	NA|203aa|up_4|NZ_CP020992.1_2326490_2327099_-	NA	NA|327aa|up_3|NZ_CP020992.1_2327101_2328082_+	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair]	NA|95aa|up_2|NZ_CP020992.1_2328185_2328470_-	NA	NA|328aa|up_1|NZ_CP020992.1_2328491_2329475_+	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair]	NA|409aa|up_0|NZ_CP020992.1_2329553_2330780_+	COG3328, COG3328, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|567aa|down_0|NZ_CP020992.1_2344419_2346120_-	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion]	NA|653aa|down_1|NZ_CP020992.1_2346851_2348810_+	TIGR03939, PGA_TPR_OMP, poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA	NA|633aa|down_2|NZ_CP020992.1_2348791_2350690_+	TIGR03938, hypothetical_protein_Pcar_2791, poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB	NA|418aa|down_3|NZ_CP020992.1_2350693_2351947_+	PRK11204, PRK11204, N-glycosyltransferase; Provisional	NA|149aa|down_4|NZ_CP020992.1_2351943_2352390_+	TIGR03940, PGA_PgaD, poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD	NA|511aa|down_5|NZ_CP020992.1_2352974_2354507_+	cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B	NA|95aa|down_6|NZ_CP020992.1_2355087_2355372_+	pfam13828, DUF4190, Domain of unknown function (DUF4190)	NA|258aa|down_7|NZ_CP020992.1_2355368_2356142_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|352aa|down_8|NZ_CP020992.1_2356147_2357203_+	PRK05286, PRK05286, quinone-dependent dihydroorotate dehydrogenase	NA|351aa|down_9|NZ_CP020992.1_2357199_2358252_+	PRK00046, murB, UDP-N-acetylmuramate dehydrogenase
GCF_002759355.1_ASM275935v1	NZ_CP020992	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP4885 chromosome, complete genome	3	2333790-2333875	3	CRISPRCasFinder	no		DinG,WYL,csa3,DEDDh,cas3	Orphan	GTTGATGTCGTTGCCGGCGCTGA	23	1	1	2333813-2333852	NZ_CP020992.1_2323652-2323691	NA	1	1	Orphan	DinG,WYL,csa3,DEDDh,cas3	NA|63aa|up_8|NZ_CP020992.1_2320224_2320413_-,NA|129aa|up_6|NZ_CP020992.1_2325523_2325910_-,NA|136aa|up_5|NZ_CP020992.1_2326086_2326494_-,NA|203aa|up_4|NZ_CP020992.1_2326490_2327099_-,NA|95aa|up_2|NZ_CP020992.1_2328185_2328470_-,NA	NA|328aa|up_9|NZ_CP020992.1_2319201_2320185_-	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair]	NA|63aa|up_8|NZ_CP020992.1_2320224_2320413_-	NA	NA|117aa|up_7|NZ_CP020992.1_2324804_2325155_+	pfam08845, SymE_toxin, Toxin SymE, type I toxin-antitoxin system	NA|129aa|up_6|NZ_CP020992.1_2325523_2325910_-	NA	NA|136aa|up_5|NZ_CP020992.1_2326086_2326494_-	NA	NA|203aa|up_4|NZ_CP020992.1_2326490_2327099_-	NA	NA|327aa|up_3|NZ_CP020992.1_2327101_2328082_+	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair]	NA|95aa|up_2|NZ_CP020992.1_2328185_2328470_-	NA	NA|328aa|up_1|NZ_CP020992.1_2328491_2329475_+	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair]	NA|409aa|up_0|NZ_CP020992.1_2329553_2330780_+	COG3328, COG3328, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|567aa|down_0|NZ_CP020992.1_2344419_2346120_-	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion]	NA|653aa|down_1|NZ_CP020992.1_2346851_2348810_+	TIGR03939, PGA_TPR_OMP, poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA	NA|633aa|down_2|NZ_CP020992.1_2348791_2350690_+	TIGR03938, hypothetical_protein_Pcar_2791, poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB	NA|418aa|down_3|NZ_CP020992.1_2350693_2351947_+	PRK11204, PRK11204, N-glycosyltransferase; Provisional	NA|149aa|down_4|NZ_CP020992.1_2351943_2352390_+	TIGR03940, PGA_PgaD, poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD	NA|511aa|down_5|NZ_CP020992.1_2352974_2354507_+	cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B	NA|95aa|down_6|NZ_CP020992.1_2355087_2355372_+	pfam13828, DUF4190, Domain of unknown function (DUF4190)	NA|258aa|down_7|NZ_CP020992.1_2355368_2356142_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|352aa|down_8|NZ_CP020992.1_2356147_2357203_+	PRK05286, PRK05286, quinone-dependent dihydroorotate dehydrogenase	NA|351aa|down_9|NZ_CP020992.1_2357199_2358252_+	PRK00046, murB, UDP-N-acetylmuramate dehydrogenase
GCF_002759355.1_ASM275935v1	NZ_CP020992	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP4885 chromosome, complete genome	4	4334492-4334592	4	CRISPRCasFinder	no		DinG,WYL,csa3,DEDDh,cas3	Orphan	GTGCAGGTGCGTCCTTCGGCCGA	23	0	0	NA	NA	NA	1	1	Orphan	DinG,WYL,csa3,DEDDh,cas3	NA,NA|206aa|down_2|NZ_CP020992.1_4337025_4337643_-,NA|251aa|down_3|NZ_CP020992.1_4337745_4338498_-	NA|215aa|up_9|NZ_CP020992.1_4321938_4322583_-	COG3165, COG3165, Uncharacterized protein conserved in bacteria [Function unknown]	NA|53aa|up_8|NZ_CP020992.1_4323388_4323547_-	COG5487, COG5487, Small integral membrane protein [Function unknown]	NA|337aa|up_7|NZ_CP020992.1_4323611_4324622_-	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs	NA|391aa|up_6|NZ_CP020992.1_4324820_4325993_+	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]	NA|516aa|up_5|NZ_CP020992.1_4326192_4327740_-	cd00383, trans_reg_C, DNA-binding effector domain of two-component system response regulators	NA|550aa|up_4|NZ_CP020992.1_4327748_4329398_-	PRK09274, PRK09274, peptide synthase; Provisional	NA|128aa|up_3|NZ_CP020992.1_4329719_4330103_+	COG0727, COG0727, Predicted Fe-S-cluster oxidoreductase [General function prediction only]	NA|301aa|up_2|NZ_CP020992.1_4330255_4331158_-	PRK00870, PRK00870, haloalkane dehalogenase; Provisional	NA|339aa|up_1|NZ_CP020992.1_4332565_4333582_-	PRK09258, PRK09258, 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed	NA|107aa|up_0|NZ_CP020992.1_4333683_4334004_-	pfam13698, DUF4156, Domain of unknown function (DUF4156)	NA|159aa|down_0|NZ_CP020992.1_4334877_4335354_+	cd18094, SpoU-like_TrmL, SAM-dependent tRNA methylase related to TrmL	NA|410aa|down_1|NZ_CP020992.1_4335703_4336933_-	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|206aa|down_2|NZ_CP020992.1_4337025_4337643_-	NA	NA|251aa|down_3|NZ_CP020992.1_4337745_4338498_-	NA	NA|449aa|down_4|NZ_CP020992.1_4338688_4340035_-	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|481aa|down_5|NZ_CP020992.1_4340019_4341462_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|576aa|down_6|NZ_CP020992.1_4341511_4343239_-	PRK09124, PRK09124, ubiquinone-dependent pyruvate dehydrogenase	NA|199aa|down_7|NZ_CP020992.1_4343594_4344191_+	TIGR04273, activator_of_XA21-mediated_immunity_Ax21, sulfation-dependent quorum factor, Ax21 family	NA|342aa|down_8|NZ_CP020992.1_4344659_4345685_-	PRK00094, gpsA, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA|171aa|down_9|NZ_CP020992.1_4345700_4346213_-	PRK05751, PRK05751, preprotein translocase subunit SecB; Validated
GCF_002759355.1_ASM275935v1	NZ_CP020992	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP4885 chromosome, complete genome	5	4547512-4547859	1,5,1	CRT,CRISPRCasFinder,PILER-CR	no	WYL	DinG,WYL,csa3,DEDDh,cas3	Unclear	GCCGTTGACCGTTTCCAN,GATGCTGCCGTTGACCGTTTCCACCCCGCC,GCCGTTGACCGTTTCCA	18,30,17	0	0	NA	NA	NA:NA:NA	6,4,4	6	Orphan	DinG,WYL,csa3,DEDDh,cas3	NA,NA|122aa|down_8|NZ_CP020992.1_4557185_4557551_-	NA|426aa|up_9|NZ_CP020992.1_4529647_4530925_-	COG3569, COG3569, Topoisomerase IB [DNA replication, recombination, and repair]	NA|127aa|up_8|NZ_CP020992.1_4530981_4531362_+	pfam11720, Inhibitor_I78, Peptidase inhibitor I78 family	NA|1491aa|up_7|NZ_CP020992.1_4531564_4536037_+	PRK11750, gltB, glutamate synthase subunit alpha; Provisional	NA|494aa|up_6|NZ_CP020992.1_4536158_4537640_+	TIGR01318, glutamate_synthase_small_subunit_gltD, glutamate synthase small subunit family protein, proteobacterial	NA|353aa|up_5|NZ_CP020992.1_4538220_4539279_-	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|358aa|up_4|NZ_CP020992.1_4539588_4540662_+	pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5)	NA|351aa|up_3|NZ_CP020992.1_4541438_4542491_+	pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5)	NA|378aa|up_2|NZ_CP020992.1_4543128_4544262_+	pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5)	NA|148aa|up_1|NZ_CP020992.1_4544557_4545001_+	pfam13670, PepSY_2, Peptidase propeptide and YPEB domain	NA|599aa|up_0|NZ_CP020992.1_4545310_4547107_-	cd05660, M28_like_PA, M28 Zn-peptidase containing a protease-associated (PA) domain insert	NA|412aa|down_0|NZ_CP020992.1_4548085_4549321_+	COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning]	NA|508aa|down_1|NZ_CP020992.1_4549425_4550949_+	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane]	NA|331aa|down_2|NZ_CP020992.1_4551111_4552104_-	cd12169, PGDH_like_1, Putative D-3-Phosphoglycerate Dehydrogenases	NA|107aa|down_3|NZ_CP020992.1_4552103_4552424_-	pfam08850, DUF1820, Domain of unknown function (DUF1820)	NA|231aa|down_4|NZ_CP020992.1_4552532_4553225_-	pfam01694, Rhomboid, Rhomboid family	NA|447aa|down_5|NZ_CP020992.1_4553443_4554784_+	pfam03349, Toluene_X, Outer membrane protein transport protein (OMPP1/FadL/TodX)	NA|234aa|down_6|NZ_CP020992.1_4555048_4555750_+	pfam13640, 2OG-FeII_Oxy_3, 2OG-Fe(II) oxygenase superfamily	NA|376aa|down_7|NZ_CP020992.1_4555934_4557062_+	TIGR04470, hypothetical_protein_ALIPUT_00462, radical SAM mobile pair protein B	NA|122aa|down_8|NZ_CP020992.1_4557185_4557551_-	NA	WYL|242aa|down_9|NZ_CP020992.1_4557599_4558325_-	COG2378, COG2378, Predicted transcriptional regulator [Transcription]
GCF_002759355.1_ASM275935v1	NZ_CP020994	Xanthomonas citri pv. phaseoli var. fuscans strain CFBP4885 plasmid pC, complete sequence	1	35140-35246	1	CRISPRCasFinder	no			Orphan	TAGTAATACGGACGGACCTTGAAC	24	0	0	NA	NA	NA	1	1	Orphan	DinG,WYL,csa3,DEDDh,cas3	NA|81aa|up_9|NZ_CP020994.1_23889_24132_-,NA|208aa|up_7|NZ_CP020994.1_24354_24978_-,NA|92aa|up_5|NZ_CP020994.1_26908_27184_-,NA|84aa|up_4|NZ_CP020994.1_31160_31412_-,NA|116aa|up_3|NZ_CP020994.1_31480_31828_-,NA|108aa|up_0|NZ_CP020994.1_34568_34892_-,NA|107aa|down_0|NZ_CP020994.1_36775_37096_-,NA|357aa|down_3|NZ_CP020994.1_40176_41247_+	NA|81aa|up_9|NZ_CP020994.1_23889_24132_-	NA	NA|74aa|up_8|NZ_CP020994.1_24136_24358_-	pfam10892, DUF2688, Protein of unknown function (DUF2688)	NA|208aa|up_7|NZ_CP020994.1_24354_24978_-	NA	NA|275aa|up_6|NZ_CP020994.1_25030_25855_-	pfam06067, DUF932, Domain of unknown function (DUF932)	NA|92aa|up_5|NZ_CP020994.1_26908_27184_-	NA	NA|84aa|up_4|NZ_CP020994.1_31160_31412_-	NA	NA|116aa|up_3|NZ_CP020994.1_31480_31828_-	NA	NA|190aa|up_2|NZ_CP020994.1_33032_33602_-	COG1715, Mrr, Restriction endonuclease [Defense mechanisms]	NA|212aa|up_1|NZ_CP020994.1_33614_34250_-	pfam11740, KfrA_N, Plasmid replication region DNA-binding N-term	NA|108aa|up_0|NZ_CP020994.1_34568_34892_-	NA	NA|107aa|down_0|NZ_CP020994.1_36775_37096_-	NA	NA|185aa|down_1|NZ_CP020994.1_37521_38076_-	pfam07929, PRiA4_ORF3, Plasmid pRiA4b ORF-3-like protein	NA|426aa|down_2|NZ_CP020994.1_38814_40092_+	pfam13406, SLT_2, Transglycosylase SLT domain	NA|357aa|down_3|NZ_CP020994.1_40176_41247_+	NA	NA|516aa|down_4|NZ_CP020994.1_43211_44759_-	pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
