assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002762175.1_ASM276217v1	NZ_CP024635	Lactobacillus brevis strain BDGP6 chromosome, complete genome	1	523857-524004	1	CRISPRCasFinder	no		DEDDh,DinG,cas3,csa3,RT,cas1,cas2,csn2	Orphan	ATCACCCCCACACCCGTGGGGAATAC	26	0	0	NA	NA	I-E,II-B	2	2	Orphan	DEDDh,DinG,cas3,csa3,RT,cas1,cas2,csn2	NA,NA	NA|199aa|up_9|NZ_CP024635.1_515767_516364_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|235aa|up_8|NZ_CP024635.1_516495_517200_+	PRK09564, PRK09564, coenzyme A disulfide reductase; Reviewed	NA|182aa|up_7|NZ_CP024635.1_517213_517759_+	TIGR03385, Coenzyme_A_disulfide_reductase, CoA-disulfide reductase	NA|141aa|up_6|NZ_CP024635.1_517837_518260_+	pfam10604, Polyketide_cyc2, Polyketide cyclase / dehydrase and lipid transport	NA|182aa|up_5|NZ_CP024635.1_518464_519010_+	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|489aa|up_4|NZ_CP024635.1_519103_520570_-	pfam00199, Catalase, Catalase	NA|162aa|up_3|NZ_CP024635.1_520935_521421_-	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|217aa|up_2|NZ_CP024635.1_521509_522160_-	cd02136, PnbA_NfnB-like, nitroreductase similar to Mycobacterium smegmatis NfnB	NA|336aa|up_1|NZ_CP024635.1_522293_523301_-	cd19079, AKR_EcYajO-like, Escherichia coli YajO and similar proteins	NA|118aa|up_0|NZ_CP024635.1_523422_523776_+	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB	NA|104aa|down_0|NZ_CP024635.1_524214_524526_-	pfam15919, HicB_lk_antitox, HicB_like antitoxin of bacterial toxin-antitoxin system	NA|480aa|down_1|NZ_CP024635.1_524655_526095_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|151aa|down_2|NZ_CP024635.1_526216_526669_+	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators	NA|149aa|down_3|NZ_CP024635.1_526830_527277_+	smart00850, LytTR, LytTr DNA-binding domain	NA|149aa|down_4|NZ_CP024635.1_527273_527720_+	pfam11457, DUF3021, Protein of unknown function (DUF3021)	NA|202aa|down_5|NZ_CP024635.1_527779_528385_-	pfam03358, FMN_red, NADPH-dependent FMN reductase	NA|478aa|down_6|NZ_CP024635.1_528371_529805_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|162aa|down_7|NZ_CP024635.1_529913_530399_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|135aa|down_8|NZ_CP024635.1_530488_530893_+	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB	NA|279aa|down_9|NZ_CP024635.1_530901_531738_-	PRK08263, PRK08263, short chain dehydrogenase; Provisional
GCF_002762175.1_ASM276217v1	NZ_CP024635	Lactobacillus brevis strain BDGP6 chromosome, complete genome	2	1633707-1633856	2	CRISPRCasFinder	no		DEDDh,DinG,cas3,csa3,RT,cas1,cas2,csn2	Orphan	GGATCACCCCCACACATGTGGGGAATAC	28	1	2	1633796-1633828|1633796-1633828	NZ_CP024635.1_271442-271410|NZ_CP024635.1_2461169-2461137	I-E,II-B	2	2	Orphan	DEDDh,DinG,cas3,csa3,RT,cas1,cas2,csn2	NA,NA|88aa|down_6|NZ_CP024635.1_1642465_1642729_-,NA|198aa|down_7|NZ_CP024635.1_1642861_1643455_-	NA|249aa|up_9|NZ_CP024635.1_1622399_1623146_+	cd02146, NfsA-like, nitroreductase similar to Escherichia coli NfsA	NA|220aa|up_8|NZ_CP024635.1_1623294_1623954_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|490aa|up_7|NZ_CP024635.1_1624118_1625588_+	cd17502, MFS_Azr1_MDR_like, Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|205aa|up_6|NZ_CP024635.1_1625691_1626306_+	COG2910, COG2910, Putative NADH-flavin reductase [General function prediction only]	NA|449aa|up_5|NZ_CP024635.1_1626396_1627743_-	cd17345, MFS_GlpT, Glycerol-3-Phosphate Transporter of the Major Facilitator Superfamily of transporters	NA|389aa|up_4|NZ_CP024635.1_1627900_1629067_-	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|272aa|up_3|NZ_CP024635.1_1629316_1630132_-	PRK05901, PRK05901, RNA polymerase sigma factor; Provisional	NA|281aa|up_2|NZ_CP024635.1_1630371_1631214_+	cd19088, AKR_AKR13B1, AKR13B family of aldo-keto reductase (AKR)	NA|476aa|up_1|NZ_CP024635.1_1631315_1632743_-	cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like	NA|192aa|up_0|NZ_CP024635.1_1632812_1633388_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|274aa|down_0|NZ_CP024635.1_1634192_1635014_-	pfam02522, Antibiotic_NAT, Aminoglycoside 3-N-acetyltransferase	NA|496aa|down_1|NZ_CP024635.1_1635474_1636962_+	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated	NA|562aa|down_2|NZ_CP024635.1_1637139_1638825_+	pfam10500, SR-25, Nuclear RNA-splicing-associated protein	NA|146aa|down_3|NZ_CP024635.1_1638908_1639346_-	COG2153, ElaA, Predicted acyltransferase [General function prediction only]	NA|143aa|down_4|NZ_CP024635.1_1639430_1639859_+	COG1846, MarR, Transcriptional regulators [Transcription]	NA|481aa|down_5|NZ_CP024635.1_1640003_1641446_+	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase	NA|88aa|down_6|NZ_CP024635.1_1642465_1642729_-	NA	NA|198aa|down_7|NZ_CP024635.1_1642861_1643455_-	NA	NA|104aa|down_8|NZ_CP024635.1_1643469_1643781_-	pfam10078, DUF2316, Uncharacterized protein conserved in bacteria (DUF2316)	NA|334aa|down_9|NZ_CP024635.1_1643797_1644799_-	COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
GCF_002762175.1_ASM276217v1	NZ_CP024635	Lactobacillus brevis strain BDGP6 chromosome, complete genome	3	1807598-1807683	3	CRISPRCasFinder	no		DEDDh,DinG,cas3,csa3,RT,cas1,cas2,csn2	Orphan	AGTGTATTCCCCACAGGTGTGGGGG	25	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,csa3,RT,cas1,cas2,csn2	NA|79aa|up_8|NZ_CP024635.1_1797404_1797641_+,NA|218aa|up_6|NZ_CP024635.1_1798633_1799287_+,NA|122aa|down_3|NZ_CP024635.1_1811246_1811612_+,NA|302aa|down_8|NZ_CP024635.1_1821765_1822671_-	NA|607aa|up_9|NZ_CP024635.1_1795386_1797207_+	pfam09972, DUF2207, Predicted membrane protein (DUF2207)	NA|79aa|up_8|NZ_CP024635.1_1797404_1797641_+	NA	NA|308aa|up_7|NZ_CP024635.1_1797624_1798548_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|218aa|up_6|NZ_CP024635.1_1798633_1799287_+	NA	NA|174aa|up_5|NZ_CP024635.1_1799988_1800510_-	pfam06177, QueT, QueT transporter	NA|1039aa|up_4|NZ_CP024635.1_1800770_1803887_+	pfam09586, YfhO, Bacterial membrane protein YfhO	NA|305aa|up_3|NZ_CP024635.1_1803988_1804903_+	cd13962, PT_UbiA_UBIAD1, 1,4-Dihydroxy-2-naphthoate octaprenyltransferase	NA|243aa|up_2|NZ_CP024635.1_1805060_1805789_-	TIGR00025, Mtu_efflux, ABC transporter efflux protein, DrrB family	NA|312aa|up_1|NZ_CP024635.1_1805851_1806787_-	TIGR01188, drrA, daunorubicin resistance ABC transporter ATP-binding subunit	NA|177aa|up_0|NZ_CP024635.1_1806932_1807463_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|437aa|down_0|NZ_CP024635.1_1807853_1809164_-	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and    metabolism]	NA|328aa|down_1|NZ_CP024635.1_1809444_1810428_-	cd19083, AKR_AKR11A1_11D1, AKR11A and  AKR11D families of aldo-keto reductase (AKR)	NA|200aa|down_2|NZ_CP024635.1_1810570_1811170_+	pfam13460, NAD_binding_10, NAD(P)H-binding	NA|122aa|down_3|NZ_CP024635.1_1811246_1811612_+	NA	NA|338aa|down_4|NZ_CP024635.1_1811743_1812757_+	cd10954, CE4_CtAXE_like, Catalytic NodB homology domain of Clostridium thermocellum acetylxylan esterase and its bacterial homologs	NA|381aa|down_5|NZ_CP024635.1_1812859_1814002_-	PRK08588, PRK08588, succinyl-diaminopimelate desuccinylase; Reviewed	NA|1202aa|down_6|NZ_CP024635.1_1814296_1817902_+	TIGR02773, ATP-dependent_helicase/deoxyribonuclease_subunit_B, helicase-exonuclease AddAB, AddB subunit	NA|1263aa|down_7|NZ_CP024635.1_1817885_1821674_+	TIGR02785, ATP-dependent_helicase/nuclease_subunit_A, helicase-exonuclease AddAB, AddA subunit, Firmicutes type	NA|302aa|down_8|NZ_CP024635.1_1821765_1822671_-	NA	NA|254aa|down_9|NZ_CP024635.1_1823085_1823847_+	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein
GCF_002762175.1_ASM276217v1	NZ_CP024635	Lactobacillus brevis strain BDGP6 chromosome, complete genome	4	1947099-1947662	1,4,1	PILER-CR,CRISPRCasFinder,CRT	no	cas1,cas2,csn2	DEDDh,DinG,cas3,csa3,RT,cas1,cas2,csn2	Type II-A	GCTTTAGAATCTTGGTAAATCAATAGGGTTAAGAAC,GCTTTAGAATCTTGGTAAATCAATAGGGTTAAGAAC,GCTTTAGAATCTTGGTAAATCAATAGGGTTAAGAAC	36,36,36	0	0	NA	NA	NA:NA:NA	8,8,8	8	TypeII-A	DEDDh,DinG,cas3,csa3,RT,cas1,cas2,csn2	NA|163aa|up_5|NZ_CP024635.1_1937530_1938019_+,NA|177aa|up_4|NZ_CP024635.1_1938005_1938536_+,NA|141aa|down_8|NZ_CP024635.1_1957512_1957935_-	NA|315aa|up_9|NZ_CP024635.1_1931923_1932868_-	cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases	NA|558aa|up_8|NZ_CP024635.1_1933026_1934700_-	cd11333, AmyAc_SI_OligoGlu_DGase, Alpha amylase catalytic domain found in Sucrose isomerases, oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), dextran glucosidase (also called glucan 1,6-alpha-glucosidase), and related proteins	NA|461aa|up_7|NZ_CP024635.1_1934720_1936103_-	cd17313, MFS_SLC45_SUC, Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters	NA|333aa|up_6|NZ_CP024635.1_1936297_1937296_+	COG1609, PurR, Transcriptional regulators [Transcription]	NA|163aa|up_5|NZ_CP024635.1_1937530_1938019_+	NA	NA|177aa|up_4|NZ_CP024635.1_1938005_1938536_+	NA	NA|548aa|up_3|NZ_CP024635.1_1938725_1940369_-	cd08504, PBP2_OppA, The substrate-binding component of an ABC-type oligopetide import system contains the type 2 periplasmic binding fold	cas1|302aa|up_2|NZ_CP024635.1_1945213_1946119_+	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas2|102aa|up_1|NZ_CP024635.1_1946096_1946402_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|222aa|up_0|NZ_CP024635.1_1946398_1947064_+	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2	NA|460aa|down_0|NZ_CP024635.1_1948317_1949697_+	cd17332, MFS_MelB_like, Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily	NA|351aa|down_1|NZ_CP024635.1_1949759_1950812_+	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|737aa|down_2|NZ_CP024635.1_1950844_1953055_+	COG1554, ATH1, Trehalose and maltose hydrolases (possible phosphorylases) [Carbohydrate transport and metabolism]	NA|278aa|down_3|NZ_CP024635.1_1953940_1954774_+	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1)	NA|177aa|down_4|NZ_CP024635.1_1954847_1955378_+	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|105aa|down_5|NZ_CP024635.1_1955382_1955697_-	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]	NA|109aa|down_6|NZ_CP024635.1_1955698_1956025_-	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]	NA|374aa|down_7|NZ_CP024635.1_1956335_1957457_+	PRK09423, gldA, glycerol dehydrogenase; Provisional	NA|141aa|down_8|NZ_CP024635.1_1957512_1957935_-	NA	NA|292aa|down_9|NZ_CP024635.1_1958293_1959169_+	pfam00480, ROK, ROK family
