The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP024645	Rhizobacter gummiphilus strain NBRC 109400 chromosome, complete genome	6398100	274266	346071	6398100	protease,integrase,transposase,holin	Faustovirus(10.0%)	56	265125:265142	348687:348704
265125:265142	attL	CGCCAACCAGACCCCGCC	NA	NA	NA	NA
WP_085748877.1|274266_275844_+|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_085748878.1|275904_281664_+	alpha-2-macroglobulin	NA	NA	NA	NA	NA
WP_085748879.1|281684_283754_+	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_085748880.1|283854_285057_+	alanine transaminase	NA	A0A1X7QHI1	Faustovirus	27.1	2.0e-05
WP_085748881.1|285093_285459_-|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_157131565.1|285590_286343_+	TonB family protein	NA	NA	NA	NA	NA
WP_085754001.1|286405_287125_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_085748882.1|287151_287571_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_085748883.1|287574_287805_+	hemin uptake protein HemP	NA	NA	NA	NA	NA
WP_085748884.1|287890_289126_+	DUF2325 domain-containing protein	NA	NA	NA	NA	NA
WP_085748885.1|289150_289876_+	DUF4198 domain-containing protein	NA	NA	NA	NA	NA
WP_085748886.1|290047_292228_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_085748887.1|292251_293445_+	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_085748888.1|293460_295572_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_085748889.1|295738_296368_+	PepSY-associated TM helix domain-containing protein	NA	NA	NA	NA	NA
WP_085748890.1|296398_296914_+	DUF2271 domain-containing protein	NA	NA	NA	NA	NA
WP_085748891.1|296945_297800_+	DUF4198 domain-containing protein	NA	NA	NA	NA	NA
WP_085748892.1|297810_298824_+	FAD:protein FMN transferase	NA	NA	NA	NA	NA
WP_085748893.1|298820_300188_+	flavodoxin domain-containing protein	NA	NA	NA	NA	NA
WP_085748894.1|300195_300876_-	Fe2+-dependent dioxygenase	NA	V5UR52	Synechococcus_phage	36.9	4.8e-20
WP_085748895.1|300966_303264_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_085748896.1|303519_304956_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_085748897.1|304960_306946_-	MacB family efflux pump subunit	NA	G9BWD6	Planktothrix_phage	38.3	3.7e-36
WP_085748898.1|306945_308646_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_169726493.1|308813_310331_+	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_099960020.1|310323_311001_+	response regulator	NA	NA	NA	NA	NA
WP_085748901.1|311213_311627_+	hypothetical protein	NA	NA	NA	NA	NA
WP_169726494.1|311720_314522_-	PAS domain-containing protein	NA	A0A1V0SGX0	Hokovirus	27.7	4.5e-24
WP_085748903.1|314745_315297_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157131566.1|315376_315523_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157131567.1|315615_316326_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085748905.1|316330_319252_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	53.9	6.5e-292
WP_085748906.1|319324_320338_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085748907.1|320337_320964_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_085748908.1|321107_322562_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_085748909.1|322596_323490_+	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_085748910.1|323497_323923_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085748911.1|324066_325494_-	alpha/beta hydrolase	NA	A0A1C9LYL3	Mycobacterium_phage	27.7	4.8e-06
WP_085748912.1|325588_329230_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085748913.1|329240_329708_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_085748914.1|329808_330105_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085748915.1|330242_332129_-	DNA helicase RecQ	NA	A0A1V0SBK0	Catovirus	35.1	3.1e-77
WP_085748916.1|332221_333379_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085748917.1|333507_334125_-	DUF502 domain-containing protein	NA	NA	NA	NA	NA
WP_085748918.1|334354_334855_+	single-stranded DNA-binding protein	NA	F8TUL2	EBPR_podovirus	50.6	1.5e-39
WP_085748919.1|334988_336242_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_085748920.1|336225_337761_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_174694872.1|337757_339845_+|integrase	integrase	integrase	NA	NA	NA	NA
WP_085748921.1|339841_340276_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099959838.1|340331_340847_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157131568.1|340769_341030_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085748923.1|341857_342211_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_085754002.1|342211_342520_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_085748924.1|343129_344680_+	DNA cytosine methyltransferase	NA	G3CB01	Aeropyrum_pernix_spindle-shaped_virus	25.2	3.2e-19
WP_085748925.1|344657_345116_-	DNA mismatch endonuclease Vsr	NA	E5E3X5	Burkholderia_phage	50.7	1.3e-34
WP_085748926.1|345120_346071_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
348687:348704	attR	CGCCAACCAGACCCCGCC	NA	NA	NA	NA
>prophage 2
NZ_CP024645	Rhizobacter gummiphilus strain NBRC 109400 chromosome, complete genome	6398100	581300	588350	6398100		Acinetobacter_phage(50.0%)	7	NA	NA
WP_085749116.1|581300_582785_+	anthranilate synthase component I	NA	A0A0B5J984	Pandoravirus	32.8	2.3e-43
WP_085749117.1|582786_583377_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	57.1	2.7e-59
WP_085749118.1|583378_584419_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	43.8	1.4e-76
WP_085749119.1|584415_585204_+	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	52.9	7.6e-62
WP_099960024.1|585215_585944_+	uracil-DNA glycosylase	NA	A0A286RUF9	Beluga_whale_alphaherpesvirus	44.5	7.3e-43
WP_085749121.1|585950_586544_-	outer membrane beta-barrel protein	NA	NA	NA	NA	NA
WP_085749122.1|587159_588350_+	elongation factor Tu	NA	A0A1V0SLW6	Klosneuvirus	28.8	1.5e-13
>prophage 3
NZ_CP024645	Rhizobacter gummiphilus strain NBRC 109400 chromosome, complete genome	6398100	3197453	3205770	6398100	protease	Bacillus_phage(33.33%)	6	NA	NA
WP_085751234.1|3197453_3198590_-	HAMP domain-containing protein	NA	A0A1V0SGX0	Hokovirus	38.5	1.2e-10
WP_085751235.1|3198651_3199374_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	34.3	3.6e-26
WP_085751236.1|3199586_3202367_+	EAL domain-containing protein	NA	A0A127AWB9	Bacillus_phage	37.5	5.5e-14
WP_085751237.1|3202593_3202914_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.7	6.1e-18
WP_085751238.1|3203119_3203473_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A218MMY6	uncultured_virus	40.7	6.1e-11
WP_085751239.1|3203469_3205770_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.3	4.4e-166
>prophage 4
NZ_CP024645	Rhizobacter gummiphilus strain NBRC 109400 chromosome, complete genome	6398100	5150117	5161102	6398100		Acanthocystis_turfacea_Chlorella_virus(37.5%)	10	NA	NA
WP_085752930.1|5150117_5151584_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.1	1.1e-48
WP_085752931.1|5151671_5152727_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	48.6	3.4e-89
WP_085752932.1|5152723_5153617_+	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_085752933.1|5153630_5154515_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	A0A291LA53	Escherichia_phage	60.6	1.8e-99
WP_085752934.1|5154514_5155066_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	57.1	2.2e-47
WP_085754298.1|5155267_5156680_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_085752935.1|5156689_5157616_+	GDP-L-fucose synthase	NA	M1I5W5	Acanthocystis_turfacea_Chlorella_virus	55.6	2.5e-96
WP_085752936.1|5157647_5158769_+	GDP-mannose 4,6-dehydratase	NA	M1IBC3	Acanthocystis_turfacea_Chlorella_virus	66.9	5.1e-136
WP_085752937.1|5158775_5160101_+	UDP-glucose/GDP-mannose dehydrogenase family protein	NA	A0A127AXI2	Bacillus_phage	39.2	2.9e-82
WP_174694893.1|5160097_5161102_+	GDP-mannose 4,6-dehydratase	NA	M1HVG7	Acanthocystis_turfacea_Chlorella_virus	44.3	1.2e-67
