assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002763745.1_ASM276374v1	NZ_CP024723	Prevotella intermedia strain KCOM 2837 chromosome 1, complete sequence	1	756457-756584	1	CRISPRCasFinder	no		RT,cas3,PD-DExK,WYL,cas2,cas1,cas9,DEDDh	Orphan	GGCTATCAGAACAACCGCCAAGGTGGCTA	29	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,PD-DExK,WYL,cas2,cas1,cas9,DEDDh,cas13b	NA|62aa|up_7|NZ_CP024723.1_745442_745628_-,NA|120aa|up_5|NZ_CP024723.1_747403_747763_+,NA|177aa|down_2|NZ_CP024723.1_760100_760631_-	NA|349aa|up_9|NZ_CP024723.1_743621_744668_-	cd08195, DHQS, Dehydroquinate synthase (DHQS) catalyzes the conversion of DAHP to DHQ in shikimate pathway for aromatic compounds synthesis	NA|152aa|up_8|NZ_CP024723.1_744831_745287_-	pfam04170, NlpE, NlpE N-terminal domain	NA|62aa|up_7|NZ_CP024723.1_745442_745628_-	NA	NA|413aa|up_6|NZ_CP024723.1_745665_746904_-	PRK07106, PRK07106, phosphoribosylaminoimidazolecarboxamide formyltransferase	NA|120aa|up_5|NZ_CP024723.1_747403_747763_+	NA	NA|274aa|up_4|NZ_CP024723.1_747996_748818_+	pfam13488, Gly-zipper_Omp, Glycine zipper	NA|231aa|up_3|NZ_CP024723.1_749304_749997_-	COG0797, RlpA, Lipoproteins [Cell envelope biogenesis, outer membrane]	NA|448aa|up_2|NZ_CP024723.1_750092_751436_-	PRK14030, PRK14030, glutamate dehydrogenase; Provisional	NA|602aa|up_1|NZ_CP024723.1_751787_753593_+	cd03283, ABC_MutS-like, ATP-binding cassette domain of MutS-like homolog	NA|449aa|up_0|NZ_CP024723.1_754446_755793_+	PRK09285, PRK09285, adenylosuccinate lyase; Provisional	NA|464aa|down_0|NZ_CP024723.1_757508_758900_+	PRK03932, asnC, asparaginyl-tRNA synthetase; Validated	NA|294aa|down_1|NZ_CP024723.1_759117_759999_-	COG1262, COG1262, Uncharacterized conserved protein [Function unknown]	NA|177aa|down_2|NZ_CP024723.1_760100_760631_-	NA	NA|174aa|down_3|NZ_CP024723.1_761208_761730_+	COG1755, COG1755, Uncharacterized protein conserved in bacteria [Function unknown]	NA|2537aa|down_4|NZ_CP024723.1_761874_769485_-	TIGR04189, gliding_motility-related_protein, cell surface protein SprA	NA|206aa|down_5|NZ_CP024723.1_769561_770179_-	PRK00116, ruvA, Holliday junction branch migration protein RuvA	NA|177aa|down_6|NZ_CP024723.1_771209_771740_-	pfam03602, Cons_hypoth95, Conserved hypothetical protein 95	NA|271aa|down_7|NZ_CP024723.1_771761_772574_-	pfam12864, DUF3822, Protein of unknown function (DUF3822)	NA|474aa|down_8|NZ_CP024723.1_772740_774162_+	cd17933, DEXSc_RecD-like, DEXS-box helicase domain of RecD and similar proteins	NA|222aa|down_9|NZ_CP024723.1_774161_774827_+	pfam10263, SprT-like, SprT-like family
GCF_002763745.1_ASM276374v1	NZ_CP024723	Prevotella intermedia strain KCOM 2837 chromosome 1, complete sequence	2	1549082-1553587	2,1	CRISPRCasFinder,PILER-CR	no	cas2,cas1,cas9,cas3	RT,cas3,PD-DExK,WYL,cas2,cas1,cas9,DEDDh	Type II-B,Type II-C,,Type II-A	GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC,GTTGTGATTAGCTTTAAAATTAGTATCTTTGCATTAGTAAATACAAC	47,47	4	4	1549360-1549389|1549591-1549620|1551974-1552003|1552282-1552311	NZ_CP024723.1_1389325-1389354|NZ_CP024723.1_1386313-1386342|NZ_CP024723.1_1373665-1373636|NZ_CP024723.1_1375006-1375035	NA:NA	58,17	58	,TypeII-C,TypeII-B,TypeII-A	RT,cas3,PD-DExK,WYL,cas2,cas1,cas9,DEDDh,cas13b	NA|479aa|up_6|NZ_CP024723.1_1539728_1541165_-,NA|450aa|up_5|NZ_CP024723.1_1541161_1542511_-,NA	NA|202aa|up_9|NZ_CP024723.1_1536600_1537206_+	PRK00071, nadD, nicotinate-nucleotide adenylyltransferase	NA|480aa|up_8|NZ_CP024723.1_1537248_1538688_+	cd13127, MATE_tuaB_like, Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins	NA|320aa|up_7|NZ_CP024723.1_1538755_1539715_-	cd04196, GT_2_like_d, Subfamily of Glycosyltransferase Family GT2 of unknown function	NA|479aa|up_6|NZ_CP024723.1_1539728_1541165_-	NA	NA|450aa|up_5|NZ_CP024723.1_1541161_1542511_-	NA	NA|321aa|up_4|NZ_CP024723.1_1542596_1543559_-	pfam12710, HAD, haloacid dehalogenase-like hydrolase	NA|293aa|up_3|NZ_CP024723.1_1543560_1544439_-	cd13963, PT_UbiA_2, UbiA family of prenyltransferases (PTases), Unknown subgroup	NA|341aa|up_2|NZ_CP024723.1_1544443_1545466_-	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism]	NA|380aa|up_1|NZ_CP024723.1_1545467_1546607_-	pfam01757, Acyl_transf_3, Acyltransferase family	NA|616aa|up_0|NZ_CP024723.1_1546633_1548481_-	cd16017, LptA, Lipooligosaccharide Phosphoethanolamine Transferase A (LptA) or Lipid A Phosphoethanolamine Transferase	cas2|99aa|down_0|NZ_CP024723.1_1553707_1554004_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|311aa|down_1|NZ_CP024723.1_1554055_1554988_-	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas9|1381aa|down_2|NZ_CP024723.1_1555000_1559143_-	pfam18541, RuvC_III, RuvC endonuclease subdomain 3	NA|475aa|down_3|NZ_CP024723.1_1560566_1561991_-	PRK12273, aspA, aspartate ammonia-lyase; Provisional	NA|399aa|down_4|NZ_CP024723.1_1562391_1563588_-	pfam07396, Porin_O_P, Phosphate-selective porin O and P	NA|352aa|down_5|NZ_CP024723.1_1563696_1564752_-	PRK11096, ansB, L-asparaginase II; Provisional	NA|439aa|down_6|NZ_CP024723.1_1564811_1566128_-	PRK09412, PRK09412, anaerobic C4-dicarboxylate transporter; Reviewed	NA|154aa|down_7|NZ_CP024723.1_1566480_1566942_+	cd03017, PRX_BCP, Peroxiredoxin (PRX) family, Bacterioferritin comigratory protein (BCP) subfamily; composed of  thioredoxin-dependent thiol peroxidases, widely expressed in pathogenic bacteria, that protect cells against toxicity from reactive oxygen species by reducing and detoxifying hydroperoxides	NA|262aa|down_8|NZ_CP024723.1_1566952_1567738_+	pfam09674, DUF2400, Protein of unknown function (DUF2400)	NA|334aa|down_9|NZ_CP024723.1_1568126_1569128_-	pfam01551, Peptidase_M23, Peptidase family M23
GCF_002763745.1_ASM276374v1	NZ_CP024724	Prevotella intermedia strain KCOM 2837 chromosome 2, complete sequence	1	575914-576014	1	CRISPRCasFinder	no		DEDDh,RT,cas13b	Orphan	TTTGCCGAGTGCAGCTATATCTTATGCAAAGGTA	34	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,PD-DExK,WYL,cas2,cas1,cas9,DEDDh,cas13b	NA,NA|143aa|down_0|NZ_CP024724.1_576317_576746_+	NA|281aa|up_9|NZ_CP024724.1_562918_563761_-	PRK06246, PRK06246, fumarate hydratase; Provisional	NA|315aa|up_8|NZ_CP024724.1_563761_564706_-	cd03222, ABC_RNaseL_inhibitor, ATP-binding cassette domain of RNase L inhibitor	NA|107aa|up_7|NZ_CP024724.1_564850_565171_-	pfam14330, DUF4387, Domain of unknown function (DUF4387)	NA|459aa|up_6|NZ_CP024724.1_565195_566572_-	pfam07287, AtuA, Acyclic terpene utilisation family protein AtuA	NA|413aa|up_5|NZ_CP024724.1_566616_567855_-	cd03314, MAL, Methylaspartate ammonia lyase (3-methylaspartase, MAL) is a homodimeric enzyme, catalyzing the magnesium-dependent reversible alpha,beta-elimination of ammonia from L-threo-(2S,3S)-3-methylaspartic acid to mesaconic acid	NA|486aa|up_4|NZ_CP024724.1_567983_569441_-	pfam06368, Met_asp_mut_E, Methylaspartate mutase E chain (MutE)	NA|462aa|up_3|NZ_CP024724.1_569468_570854_-	pfam13941, MutL, MutL protein	NA|139aa|up_2|NZ_CP024724.1_570857_571274_-	PRK02261, PRK02261, methylaspartate mutase subunit S; Provisional	NA|310aa|up_1|NZ_CP024724.1_571821_572751_-	smart00047, LYZ2, Lysozyme subfamily 2	NA|592aa|up_0|NZ_CP024724.1_573317_575093_-	PRK06299, rpsA, 30S ribosomal protein S1; Reviewed	NA|143aa|down_0|NZ_CP024724.1_576317_576746_+	NA	NA|403aa|down_1|NZ_CP024724.1_576838_578047_-	TIGR00720, hypothetical_protein_NEICINOT_00681, L-serine dehydratase, iron-sulfur-dependent, single chain form	NA|680aa|down_2|NZ_CP024724.1_578315_580355_-	PRK09376, rho, transcription termination factor Rho; Provisional	NA|348aa|down_3|NZ_CP024724.1_580510_581554_-	COG0618, COG0618, Exopolyphosphatase-related proteins [General function prediction only]	NA|304aa|down_4|NZ_CP024724.1_581630_582542_-	cd04181, NTP_transferase, NTP_transferases catalyze the transfer of nucleotides onto phosphosugars	NA|387aa|down_5|NZ_CP024724.1_583415_584576_+	pfam01051, Rep_3, Initiator Replication protein	NA|170aa|down_6|NZ_CP024724.1_584615_585125_+	pfam14300, DUF4375, Domain of unknown function (DUF4375)	NA|160aa|down_7|NZ_CP024724.1_585117_585597_+	pfam01668, SmpB, SmpB protein	NA|157aa|down_8|NZ_CP024724.1_586139_586610_-	pfam02590, SPOUT_MTase, Predicted SPOUT methyltransferase	NA|104aa|down_9|NZ_CP024724.1_586606_586918_-	pfam14898, DUF4491, Domain of unknown function (DUF4491)
GCF_002763745.1_ASM276374v1	NZ_CP024724	Prevotella intermedia strain KCOM 2837 chromosome 2, complete sequence	2	793828-795045	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas13b	DEDDh,RT,cas13b	Type VI-B1,Type VI-B2	GTTGCATCTGCCTTCTGTTTGCAAGGTAAAAACAAC,GTTGCATCTGCCTTCTGTTTGCAAGGTAAAAACAAC,GTTGCATCTGCCTTCTGTTTGCAAGGTAAAAACAAC	36,36,36	0	0	NA	NA	VI-B2:VI-B2:VI-B2	18,18,17	18	TypeVI-B1,TypeVI-B2	RT,cas3,PD-DExK,WYL,cas2,cas1,cas9,DEDDh,cas13b	NA|339aa|up_3|NZ_CP024724.1_781370_782387_+,NA|139aa|up_2|NZ_CP024724.1_788380_788797_-,NA|68aa|down_0|NZ_CP024724.1_795332_795536_-,NA|678aa|down_7|NZ_CP024724.1_808281_810315_-,NA|170aa|down_8|NZ_CP024724.1_811060_811570_-	NA|218aa|up_9|NZ_CP024724.1_771307_771961_-	cd01041, Rubrerythrin, Rubrerythrin, ferritin-like diiron-binding domain	NA|326aa|up_8|NZ_CP024724.1_772514_773492_+	pfam13310, Virulence_RhuM, Virulence protein RhuM family	NA|155aa|up_7|NZ_CP024724.1_774242_774707_+	cd03450, NodN, NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit	NA|264aa|up_6|NZ_CP024724.1_774913_775705_-	TIGR02493, PFLA, pyruvate formate-lyase 1-activating enzyme	NA|749aa|up_5|NZ_CP024724.1_775940_778187_-	cd01678, PFL1, Pyruvate formate lyase 1	NA|715aa|up_4|NZ_CP024724.1_779213_781358_+	pfam13175, AAA_15, AAA ATPase domain	NA|339aa|up_3|NZ_CP024724.1_781370_782387_+	NA	NA|139aa|up_2|NZ_CP024724.1_788380_788797_-	NA	NA|298aa|up_1|NZ_CP024724.1_788974_789868_+	pfam04338, DUF481, Protein of unknown function, DUF481	cas13b|1127aa|up_0|NZ_CP024724.1_790146_793527_+	cd20477, Cas13b_Pb-like, Class 2 type VI-B CRISPR-associated RNA-guided ribonuclease Cas13b from Prevotella buccae and similar Cas13b proteins	NA|68aa|down_0|NZ_CP024724.1_795332_795536_-	NA	NA|1007aa|down_1|NZ_CP024724.1_795863_798884_-	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain	NA|267aa|down_2|NZ_CP024724.1_799680_800481_+	pfam04383, KilA-N, KilA-N domain	NA|506aa|down_3|NZ_CP024724.1_800641_802159_-	pfam14134, DUF4301, Domain of unknown function (DUF4301)	NA|733aa|down_4|NZ_CP024724.1_802310_804509_+	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription]	NA|206aa|down_5|NZ_CP024724.1_804632_805250_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|763aa|down_6|NZ_CP024724.1_805386_807675_+	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed	NA|678aa|down_7|NZ_CP024724.1_808281_810315_-	NA	NA|170aa|down_8|NZ_CP024724.1_811060_811570_-	NA	NA|652aa|down_9|NZ_CP024724.1_811663_813619_-	PRK02628, nadE, NAD synthetase; Reviewed
