assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002763785.1_ASM276378v1	NZ_CP024726	Prevotella intermedia strain KCOM 2838 chromosome 2, complete sequence	1	382445-383794	1,1,1,2,3	PILER-CR,CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	cas13b,Csx28	DEDDh,RT,cas13b,Csx28,PD-DExK	Type VI-B2,Type VI-B1	GTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAAC,GTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAAC,GTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAAC,GTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAAC,GTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAAC	36,36,36,36,36	2	2	382481-382509|382677-382706	NZ_CP024725.1_1633131-1633159|NZ_CP024725.1_1925852-1925881	VI-B2:VI-B2:VI-B2:VI-B2:VI-B2	16,20,20,16,16	20	TypeVI-B2,TypeVI-B1	cas3,RT,PD-DExK,DEDDh,cas9,cas1,cas2,WYL,cas13b,Csx28	NA|63aa|up_9|NZ_CP024726.1_364812_365001_-,NA|236aa|up_6|NZ_CP024726.1_369030_369738_-,NA|122aa|up_5|NZ_CP024726.1_369724_370090_-,NA|117aa|up_4|NZ_CP024726.1_370235_370586_-,NA|298aa|up_2|NZ_CP024726.1_377282_378176_+,Csx28|187aa|up_0|NZ_CP024726.1_381815_382376_+,NA|74aa|down_0|NZ_CP024726.1_384061_384283_-,NA|144aa|down_7|NZ_CP024726.1_397166_397598_-	NA|63aa|up_9|NZ_CP024726.1_364812_365001_-	NA	NA|749aa|up_8|NZ_CP024726.1_365028_367275_-	cd01678, PFL1, Pyruvate formate lyase 1	NA|328aa|up_7|NZ_CP024726.1_368057_369041_-	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|236aa|up_6|NZ_CP024726.1_369030_369738_-	NA	NA|122aa|up_5|NZ_CP024726.1_369724_370090_-	NA	NA|117aa|up_4|NZ_CP024726.1_370235_370586_-	NA	NA|139aa|up_3|NZ_CP024726.1_376689_377106_-	TIGR02169, chromosome_segregation_protein_related_ptotein, chromosome segregation protein SMC, primarily archaeal type	NA|298aa|up_2|NZ_CP024726.1_377282_378176_+	NA	cas13b|1119aa|up_1|NZ_CP024726.1_378454_381811_+	cd20477, Cas13b_Pb-like, Class 2 type VI-B CRISPR-associated RNA-guided ribonuclease Cas13b from Prevotella buccae and similar Cas13b proteins	Csx28|187aa|up_0|NZ_CP024726.1_381815_382376_+	NA	NA|74aa|down_0|NZ_CP024726.1_384061_384283_-	NA	NA|1007aa|down_1|NZ_CP024726.1_384610_387631_-	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain	NA|506aa|down_2|NZ_CP024726.1_388470_389988_-	pfam14134, DUF4301, Domain of unknown function (DUF4301)	NA|733aa|down_3|NZ_CP024726.1_390140_392339_+	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription]	NA|206aa|down_4|NZ_CP024726.1_392484_393102_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|763aa|down_5|NZ_CP024726.1_393238_395527_+	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed	NA|354aa|down_6|NZ_CP024726.1_396121_397183_-	pfam03432, Relaxase, Relaxase/Mobilisation nuclease domain	NA|144aa|down_7|NZ_CP024726.1_397166_397598_-	NA	NA|145aa|down_8|NZ_CP024726.1_397980_398415_-	pfam11888, DUF3408, Protein of unknown function (DUF3408)	NA|325aa|down_9|NZ_CP024726.1_398417_399392_-	pfam13155, Toprim_2, Toprim-like
GCF_002763785.1_ASM276378v1	NZ_CP024725	Prevotella intermedia strain KCOM 2838 chromosome 1, complete sequence	1	994001-994103	1	CRISPRCasFinder	no		cas3,RT,PD-DExK,DEDDh,cas9,cas1,cas2,WYL	Orphan	AACTTTCAATTTGTCGAGTGCAGCTATATCTTATGC	36	0	0	NA	NA	NA	1	1	Orphan	cas3,RT,PD-DExK,DEDDh,cas9,cas1,cas2,WYL,cas13b,Csx28	NA,NA	NA|620aa|up_9|NZ_CP024725.1_980171_982031_+	PRK07726, PRK07726, DNA topoisomerase 3	NA|705aa|up_8|NZ_CP024725.1_982096_984211_+	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA	NA|449aa|up_7|NZ_CP024725.1_984231_985578_+	COG0144, Sun, tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]	NA|265aa|up_6|NZ_CP024725.1_985586_986381_+	PRK01827, thyA, thymidylate synthase; Reviewed	NA|163aa|up_5|NZ_CP024725.1_986405_986894_+	pfam00186, DHFR_1, Dihydrofolate reductase	NA|671aa|up_4|NZ_CP024725.1_987403_989416_-	pfam06874, FBPase_2, Firmicute fructose-1,6-bisphosphatase	NA|388aa|up_3|NZ_CP024725.1_989444_990608_-	cd03821, GT4_Bme6-like, Brucella melitensis Bme6 and similar proteins	NA|402aa|up_2|NZ_CP024725.1_990607_991813_-	cd04192, GT_2_like_e, Subfamily of Glycosyltransferase Family GT2 of unknown function	NA|439aa|up_1|NZ_CP024725.1_991819_993136_-	PRK09084, PRK09084, aspartate kinase III; Validated	NA|259aa|up_0|NZ_CP024725.1_993157_993934_-	TIGR02673, cell_division_ATP-binding_protein_FtsE, cell division ATP-binding protein FtsE	NA|177aa|down_0|NZ_CP024725.1_994620_995151_-	cd00060, FHA, Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins	NA|328aa|down_1|NZ_CP024725.1_995157_996141_-	pfam18174, HU-CCDC81_bac_1, CCDC81-like prokaryotic HU domain 1	NA|151aa|down_2|NZ_CP024725.1_996243_996696_-	pfam14126, DUF4293, Domain of unknown function (DUF4293)	NA|116aa|down_3|NZ_CP024725.1_996692_997040_-	pfam01192, RNA_pol_Rpb6, RNA polymerase Rpb6	NA|278aa|down_4|NZ_CP024725.1_997063_997897_-	TIGR03302, OM_YfiO, outer membrane assembly lipoprotein YfiO	NA|682aa|down_5|NZ_CP024725.1_998023_1000069_+	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|300aa|down_6|NZ_CP024725.1_1000367_1001267_+	pfam13612, DDE_Tnp_1_3, Transposase DDE domain	NA|151aa|down_7|NZ_CP024725.1_1001574_1002027_+	pfam12833, HTH_18, Helix-turn-helix domain	NA|657aa|down_8|NZ_CP024725.1_1002050_1004021_+	pfam03571, Peptidase_M49, Peptidase family M49	NA|206aa|down_9|NZ_CP024725.1_1004017_1004635_+	cd06561, AlkD_like, A new structural DNA glycosylase
GCF_002763785.1_ASM276378v1	NZ_CP024725	Prevotella intermedia strain KCOM 2838 chromosome 1, complete sequence	2	1584317-1586744	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas9,cas1,cas2	cas3,RT,PD-DExK,DEDDh,cas9,cas1,cas2,WYL	 or Type II-C?,Type II-C,Type II-A,Type II-B, Type II-B	GTTGTATTTACCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC,CCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC,GTTGTATTTACCAATGCAAAGATACTAATTTTAAAGCTAATCACAAC	47,37,47	0	0	NA	NA	NA:NA:NA	31,31,21	31	orTypeII-C?,TypeII-C,TypeII-A,TypeII-B,TypeII-B	cas3,RT,PD-DExK,DEDDh,cas9,cas1,cas2,WYL,cas13b,Csx28	NA,NA|450aa|down_5|NZ_CP024725.1_1593313_1594663_+,NA|479aa|down_6|NZ_CP024725.1_1594659_1596096_+	NA|262aa|up_9|NZ_CP024725.1_1569113_1569899_-	pfam09674, DUF2400, Protein of unknown function (DUF2400)	NA|154aa|up_8|NZ_CP024725.1_1569909_1570371_-	cd03017, PRX_BCP, Peroxiredoxin (PRX) family, Bacterioferritin comigratory protein (BCP) subfamily; composed of  thioredoxin-dependent thiol peroxidases, widely expressed in pathogenic bacteria, that protect cells against toxicity from reactive oxygen species by reducing and detoxifying hydroperoxides	NA|439aa|up_7|NZ_CP024725.1_1570723_1572040_+	PRK09412, PRK09412, anaerobic C4-dicarboxylate transporter; Reviewed	NA|352aa|up_6|NZ_CP024725.1_1572099_1573155_+	PRK11096, ansB, L-asparaginase II; Provisional	NA|399aa|up_5|NZ_CP024725.1_1573263_1574460_+	pfam07396, Porin_O_P, Phosphate-selective porin O and P	NA|475aa|up_4|NZ_CP024725.1_1574860_1576285_+	PRK12273, aspA, aspartate ammonia-lyase; Provisional	NA|444aa|up_3|NZ_CP024725.1_1576575_1577907_+	pfam13173, AAA_14, AAA domain	cas9|1381aa|up_2|NZ_CP024725.1_1578760_1582903_+	pfam18541, RuvC_III, RuvC endonuclease subdomain 3	cas1|311aa|up_1|NZ_CP024725.1_1582915_1583848_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|99aa|up_0|NZ_CP024725.1_1583899_1584196_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	NA|616aa|down_0|NZ_CP024725.1_1587343_1589191_+	cd16017, LptA, Lipooligosaccharide Phosphoethanolamine Transferase A (LptA) or Lipid A Phosphoethanolamine Transferase	NA|368aa|down_1|NZ_CP024725.1_1589253_1590357_+	pfam01757, Acyl_transf_3, Acyltransferase family	NA|341aa|down_2|NZ_CP024725.1_1590358_1591381_+	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism]	NA|293aa|down_3|NZ_CP024725.1_1591385_1592264_+	cd13963, PT_UbiA_2, UbiA family of prenyltransferases (PTases), Unknown subgroup	NA|321aa|down_4|NZ_CP024725.1_1592265_1593228_+	pfam12710, HAD, haloacid dehalogenase-like hydrolase	NA|450aa|down_5|NZ_CP024725.1_1593313_1594663_+	NA	NA|479aa|down_6|NZ_CP024725.1_1594659_1596096_+	NA	NA|320aa|down_7|NZ_CP024725.1_1596109_1597069_+	cd04196, GT_2_like_d, Subfamily of Glycosyltransferase Family GT2 of unknown function	NA|482aa|down_8|NZ_CP024725.1_1597130_1598576_-	cd13127, MATE_tuaB_like, Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins	NA|194aa|down_9|NZ_CP024725.1_1598642_1599224_-	PRK00071, nadD, nicotinate-nucleotide adenylyltransferase
