assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002763845.1_ASM276384v1	NZ_CP024730	Prevotella intermedia strain KCOM 1933 chromosome 2, complete sequence	1	94695-94801	1	CRISPRCasFinder	no		cas13b,Csx28,DEDDh	Orphan	GCCAGCGAGTGCAAAGAAAGTTTACTTTCAATTTGCCGAG	40	1	1	94735-94761	NZ_CP024729.1_1991749-1991723	NA	1	1	Orphan	DEDDh,cas3,WYL,RT,cas13b,Csx28	NA,NA|143aa|down_0|NZ_CP024730.1_95129_95558_+	NA|329aa|up_9|NZ_CP024730.1_82872_83859_-	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]	NA|496aa|up_8|NZ_CP024730.1_83971_85459_-	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|73aa|up_7|NZ_CP024730.1_85648_85867_+	pfam14899, DUF4492, Domain of unknown function (DUF4492)	NA|512aa|up_6|NZ_CP024730.1_86049_87585_+	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I	NA|381aa|up_5|NZ_CP024730.1_87581_88724_+	pfam02322, Cyt_bd_oxida_II, Cytochrome bd terminal oxidase subunit II	NA|409aa|up_4|NZ_CP024730.1_89314_90541_+	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only]	NA|227aa|up_3|NZ_CP024730.1_90559_91240_+	pfam00160, Pro_isomerase, Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD	NA|582aa|up_2|NZ_CP024730.1_91511_93257_-	cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1)	NA|104aa|up_1|NZ_CP024730.1_93479_93791_+	pfam14898, DUF4491, Domain of unknown function (DUF4491)	NA|157aa|up_0|NZ_CP024730.1_93787_94258_+	pfam02590, SPOUT_MTase, Predicted SPOUT methyltransferase	NA|143aa|down_0|NZ_CP024730.1_95129_95558_+	NA	NA|403aa|down_1|NZ_CP024730.1_95650_96859_-	TIGR00720, hypothetical_protein_NEICINOT_00681, L-serine dehydratase, iron-sulfur-dependent, single chain form	NA|680aa|down_2|NZ_CP024730.1_97127_99167_-	PRK09376, rho, transcription termination factor Rho; Provisional	NA|348aa|down_3|NZ_CP024730.1_99322_100366_-	COG0618, COG0618, Exopolyphosphatase-related proteins [General function prediction only]	NA|304aa|down_4|NZ_CP024730.1_100442_101354_-	cd04181, NTP_transferase, NTP_transferases catalyze the transfer of nucleotides onto phosphosugars	NA|387aa|down_5|NZ_CP024730.1_102226_103387_+	pfam01051, Rep_3, Initiator Replication protein	NA|170aa|down_6|NZ_CP024730.1_103427_103937_+	pfam14300, DUF4375, Domain of unknown function (DUF4375)	NA|160aa|down_7|NZ_CP024730.1_103929_104409_+	pfam01668, SmpB, SmpB protein	NA|592aa|down_8|NZ_CP024730.1_105303_107079_+	PRK06299, rpsA, 30S ribosomal protein S1; Reviewed	NA|310aa|down_9|NZ_CP024730.1_107646_108576_+	smart00047, LYZ2, Lysozyme subfamily 2
GCF_002763845.1_ASM276384v1	NZ_CP024730	Prevotella intermedia strain KCOM 1933 chromosome 2, complete sequence	2	253965-254788	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas13b,Csx28	cas13b,Csx28,DEDDh	Type VI-B1,Type VI-B2	GTTGCATCTGCCTGCTGTTTGCAAGGTAAAAACAAC,CTGTTTGNAAGGTAAAAACAAC,CTGTTTGCAAGGTAAAAACAAC	36,22,22	0	0	NA	NA	VI-B2:NA:VI-B2	12,12,10	12	TypeVI-B1,TypeVI-B2	DEDDh,cas3,WYL,RT,cas13b,Csx28	NA|97aa|up_5|NZ_CP024730.1_241092_241383_+,NA|226aa|up_4|NZ_CP024730.1_241379_242057_+,NA|139aa|up_3|NZ_CP024730.1_248187_248604_-,NA|298aa|up_2|NZ_CP024730.1_248780_249674_+,Csx28|187aa|up_0|NZ_CP024730.1_253335_253896_+,NA|140aa|down_0|NZ_CP024730.1_255033_255453_+,NA|678aa|down_6|NZ_CP024730.1_267107_269141_-,NA|170aa|down_7|NZ_CP024730.1_270038_270548_-	NA|155aa|up_9|NZ_CP024730.1_233965_234430_+	cd03450, NodN, NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit	NA|264aa|up_8|NZ_CP024730.1_234636_235428_-	TIGR02493, PFLA, pyruvate formate-lyase 1-activating enzyme	NA|749aa|up_7|NZ_CP024730.1_235663_237910_-	cd01678, PFL1, Pyruvate formate lyase 1	NA|715aa|up_6|NZ_CP024730.1_238935_241080_+	pfam13175, AAA_15, AAA ATPase domain	NA|97aa|up_5|NZ_CP024730.1_241092_241383_+	NA	NA|226aa|up_4|NZ_CP024730.1_241379_242057_+	NA	NA|139aa|up_3|NZ_CP024730.1_248187_248604_-	NA	NA|298aa|up_2|NZ_CP024730.1_248780_249674_+	NA	cas13b|1126aa|up_1|NZ_CP024730.1_249953_253331_+	cd20477, Cas13b_Pb-like, Class 2 type VI-B CRISPR-associated RNA-guided ribonuclease Cas13b from Prevotella buccae and similar Cas13b proteins	Csx28|187aa|up_0|NZ_CP024730.1_253335_253896_+	NA	NA|140aa|down_0|NZ_CP024730.1_255033_255453_+	NA	NA|1007aa|down_1|NZ_CP024730.1_255606_258627_-	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain	NA|506aa|down_2|NZ_CP024730.1_259465_260983_-	pfam14134, DUF4301, Domain of unknown function (DUF4301)	NA|733aa|down_3|NZ_CP024730.1_261135_263334_+	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription]	NA|206aa|down_4|NZ_CP024730.1_263457_264075_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|763aa|down_5|NZ_CP024730.1_264211_266500_+	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed	NA|678aa|down_6|NZ_CP024730.1_267107_269141_-	NA	NA|170aa|down_7|NZ_CP024730.1_270038_270548_-	NA	NA|652aa|down_8|NZ_CP024730.1_270641_272597_-	PRK02628, nadE, NAD synthetase; Reviewed	NA|397aa|down_9|NZ_CP024730.1_272612_273803_-	pfam09640, DUF2027, Domain of unknown function (DUF2027)
GCF_002763845.1_ASM276384v1	NZ_CP024730	Prevotella intermedia strain KCOM 1933 chromosome 2, complete sequence	3	374814-374903	3	CRISPRCasFinder	no		cas13b,Csx28,DEDDh	Orphan	ACTCATCACATTCCTAAAACAAAA	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,WYL,RT,cas13b,Csx28	NA|346aa|up_8|NZ_CP024730.1_364363_365401_+,NA|144aa|up_6|NZ_CP024730.1_366541_366973_-,NA|116aa|up_5|NZ_CP024730.1_367325_367673_-,NA|196aa|up_0|NZ_CP024730.1_374192_374780_+,NA|405aa|down_0|NZ_CP024730.1_375465_376680_-,NA|537aa|down_1|NZ_CP024730.1_377407_379018_-,NA|113aa|down_8|NZ_CP024730.1_386639_386978_+,NA|31aa|down_9|NZ_CP024730.1_387076_387169_-	NA|154aa|up_9|NZ_CP024730.1_363503_363965_-	pfam18291, HU-HIG, HU domain fused to wHTH, Ig, or Glycine-rich motif	NA|346aa|up_8|NZ_CP024730.1_364363_365401_+	NA	NA|140aa|up_7|NZ_CP024730.1_366099_366519_-	pfam14058, PcfK, PcfK-like protein	NA|144aa|up_6|NZ_CP024730.1_366541_366973_-	NA	NA|116aa|up_5|NZ_CP024730.1_367325_367673_-	NA	NA|156aa|up_4|NZ_CP024730.1_367840_368308_-	pfam08989, DUF1896, Domain of unknown function (DUF1896)	NA|408aa|up_3|NZ_CP024730.1_368342_369566_-	cd01185, INTN1_C_like, Integrase IntN1 of Bacteroides mobilizable transposon NBU1 and similar proteins, C-terminal catalytic domain	NA|264aa|up_2|NZ_CP024730.1_370357_371149_-	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed	NA|550aa|up_1|NZ_CP024730.1_371724_373374_-	cd07477, Peptidases_S8_Subtilisin_subset, Peptidase S8 family domain in Subtilisin proteins	NA|196aa|up_0|NZ_CP024730.1_374192_374780_+	NA	NA|405aa|down_0|NZ_CP024730.1_375465_376680_-	NA	NA|537aa|down_1|NZ_CP024730.1_377407_379018_-	NA	NA|578aa|down_2|NZ_CP024730.1_379990_381724_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|585aa|down_3|NZ_CP024730.1_381749_383504_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|205aa|down_4|NZ_CP024730.1_383536_384151_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|162aa|down_5|NZ_CP024730.1_384859_385345_+	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin	NA|120aa|down_6|NZ_CP024730.1_385364_385724_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|144aa|down_7|NZ_CP024730.1_386014_386446_+	cd07153, Fur_like, Ferric uptake regulator(Fur) and related metalloregulatory proteins; typically iron-dependent, DNA-binding repressors and activators	NA|113aa|down_8|NZ_CP024730.1_386639_386978_+	NA	NA|31aa|down_9|NZ_CP024730.1_387076_387169_-	NA
GCF_002763845.1_ASM276384v1	NZ_CP024729	Prevotella intermedia strain KCOM 1933 chromosome 1, complete sequence	1	1991658-1991748	1	CRISPRCasFinder	no		DEDDh,cas3,WYL,RT	Orphan	TATCTTTGCATAAGATATAGCTGC	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,WYL,RT,cas13b,Csx28	NA,NA|80aa|down_5|NZ_CP024729.1_1999000_1999240_+	NA|705aa|up_9|NZ_CP024729.1_1980500_1982615_+	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA	NA|449aa|up_8|NZ_CP024729.1_1982635_1983982_+	COG0144, Sun, tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]	NA|265aa|up_7|NZ_CP024729.1_1983990_1984785_+	PRK01827, thyA, thymidylate synthase; Reviewed	NA|163aa|up_6|NZ_CP024729.1_1984809_1985298_+	pfam00186, DHFR_1, Dihydrofolate reductase	NA|682aa|up_5|NZ_CP024729.1_1985698_1987744_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|278aa|up_4|NZ_CP024729.1_1987870_1988704_+	TIGR03302, OM_YfiO, outer membrane assembly lipoprotein YfiO	NA|116aa|up_3|NZ_CP024729.1_1988727_1989075_+	pfam01192, RNA_pol_Rpb6, RNA polymerase Rpb6	NA|151aa|up_2|NZ_CP024729.1_1989071_1989524_+	pfam14126, DUF4293, Domain of unknown function (DUF4293)	NA|328aa|up_1|NZ_CP024729.1_1989626_1990610_+	pfam18174, HU-CCDC81_bac_1, CCDC81-like prokaryotic HU domain 1	NA|177aa|up_0|NZ_CP024729.1_1990616_1991147_+	cd00060, FHA, Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins	NA|259aa|down_0|NZ_CP024729.1_1991833_1992610_+	TIGR02673, cell_division_ATP-binding_protein_FtsE, cell division ATP-binding protein FtsE	NA|439aa|down_1|NZ_CP024729.1_1992631_1993948_+	PRK09084, PRK09084, aspartate kinase III; Validated	NA|402aa|down_2|NZ_CP024729.1_1993955_1995161_+	cd04192, GT_2_like_e, Subfamily of Glycosyltransferase Family GT2 of unknown function	NA|388aa|down_3|NZ_CP024729.1_1995160_1996324_+	cd03821, GT4_Bme6-like, Brucella melitensis Bme6 and similar proteins	NA|671aa|down_4|NZ_CP024729.1_1996352_1998365_+	pfam06874, FBPase_2, Firmicute fructose-1,6-bisphosphatase	NA|80aa|down_5|NZ_CP024729.1_1999000_1999240_+	NA	NA|792aa|down_6|NZ_CP024729.1_1999236_2001612_+	pfam14121, Porin_10, Putative porin	NA|319aa|down_7|NZ_CP024729.1_2001624_2002581_+	cd13962, PT_UbiA_UBIAD1, 1,4-Dihydroxy-2-naphthoate octaprenyltransferase	NA|218aa|down_8|NZ_CP024729.1_2002590_2003244_+	smart00471, HDc, Metal dependent phosphohydrolases with conserved 'HD' motif	NA|156aa|down_9|NZ_CP024729.1_2003284_2003752_+	cd01285, nucleoside_deaminase, Nucleoside deaminases include adenosine, guanine and cytosine deaminases
