The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP022290	Staphylococcus aureus subsp. aureus strain EDCC5458 chromosome, complete genome	2848525	714974	722794	2848525		Hokovirus(16.67%)	10	NA	NA
WP_000244412.1|714974_716030_-	two-component system sensor histidine kinase SaeS	NA	A0A1V0SGX0	Hokovirus	30.0	2.1e-14
WP_000149344.1|716029_716716_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001037807.1|716690_717164_-	DoxX family protein	NA	NA	NA	NA	NA
WP_001093553.1|717505_717946_-	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_000637687.1|718225_718810_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001062972.1|718908_719622_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000941336.1|719625_720045_-	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_000446724.1|720046_720715_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000604514.1|721065_721659_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
WP_001217785.1|721642_722794_+	anthranilate synthase component I family protein	NA	A0A0B5J984	Pandoravirus	35.7	1.6e-23
>prophage 2
NZ_CP022290	Staphylococcus aureus subsp. aureus strain EDCC5458 chromosome, complete genome	2848525	734766	749553	2848525		uncultured_Caudovirales_phage(50.0%)	14	NA	NA
WP_000663030.1|734766_735825_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	26.7	7.9e-22
WP_000197271.1|736175_736718_+	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000429014.1|737397_738315_-	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	3.7e-07
WP_001790641.1|738405_738507_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000193751.1|738584_740090_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_000930014.1|740430_740931_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_001068497.1|740950_741817_-	DMT family transporter	NA	NA	NA	NA	NA
WP_000692521.1|742617_743016_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_000855505.1|742978_745084_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000562498.1|745201_746173_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000499195.1|746686_746842_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000876318.1|746880_747852_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
WP_001245577.1|747838_748795_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000616842.1|748791_749553_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	8.5e-18
>prophage 3
NZ_CP022290	Staphylococcus aureus subsp. aureus strain EDCC5458 chromosome, complete genome	2848525	994335	1002808	2848525		Synechococcus_phage(33.33%)	9	NA	NA
WP_000861572.1|994335_994818_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
WP_001010412.1|994804_995929_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000174053.1|995932_996637_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
WP_000848350.1|996636_996900_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000666799.1|996901_997573_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000032727.1|997565_999755_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.7	1.0e-140
WP_000483713.1|999733_1001218_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	3.2e-45
WP_100183635.1|1001210_1002239_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.4	4.5e-62
WP_000238664.1|1002241_1002808_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	6.1e-29
>prophage 4
NZ_CP022290	Staphylococcus aureus subsp. aureus strain EDCC5458 chromosome, complete genome	2848525	1054462	1113778	2848525	plate,tail,terminase,head,tRNA,portal,holin,capsid	Staphylococcus_phage(77.94%)	83	NA	NA
WP_000401377.1|1054462_1054945_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	46.2	2.6e-28
WP_000843611.1|1055006_1056146_-	nucleotidyltransferase	NA	NA	NA	NA	NA
WP_000872158.1|1056272_1056830_+	DUF177 domain-containing protein	NA	NA	NA	NA	NA
WP_000290472.1|1056909_1057083_+	50S ribosomal protein L32	NA	NA	NA	NA	NA
WP_000861313.1|1057199_1058585_-	recombinase family protein	NA	I1W625	Staphylococcus_phage	100.0	2.5e-265
WP_000392109.1|1058791_1059472_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A2H4PQQ5	Staphylococcus_phage	100.0	5.1e-123
WP_000358224.1|1059507_1060227_-	helix-turn-helix transcriptional regulator	NA	A0A2H4PQQ2	Staphylococcus_phage	100.0	1.3e-132
WP_001198672.1|1060368_1060587_+	helix-turn-helix transcriptional regulator	NA	A0A2H4PQQ0	Staphylococcus_phage	100.0	1.7e-35
WP_001148566.1|1060602_1061391_+	phage antirepressor KilAC domain-containing protein	NA	A0EWP1	Staphylococcus_virus	100.0	4.2e-145
WP_000390104.1|1061407_1061602_+	hypothetical protein	NA	E9LT75	Staphylococcus_phage	98.4	7.9e-29
WP_000395457.1|1061805_1062036_-	hypothetical protein	NA	R4IG40	Staphylococcus_phage	100.0	2.3e-35
WP_000066026.1|1062215_1062377_+	DUF1270 family protein	NA	C8CGY5	Staphylococcus_phage	100.0	2.5e-20
WP_000291489.1|1062471_1062732_+	DUF1108 family protein	NA	A0A1W6JQ03	Staphylococcus_phage	100.0	7.6e-43
WP_000999048.1|1062744_1063281_+	host-nuclease inhibitor Gam family protein	NA	A0A2I6PD93	Staphylococcus_phage	100.0	1.7e-81
WP_000840496.1|1063281_1063932_+	ERF family protein	NA	A0A0F6N3I5	Staphylococcus_phage	100.0	1.1e-119
WP_100183637.1|1063928_1064372_+	single-stranded DNA-binding protein	NA	A0A2I6PD99	Staphylococcus_phage	99.3	4.0e-76
WP_000057263.1|1064383_1065058_+	hypothetical protein	NA	A1KX69	Staphylococcus_virus	100.0	3.9e-131
WP_001081076.1|1065054_1065204_+	hypothetical protein	NA	A7TWN0	Staphylococcus_phage	100.0	2.4e-17
WP_000414755.1|1065196_1065478_-	hypothetical protein	NA	A0A1W6JPU7	Staphylococcus_phage	100.0	2.6e-49
WP_000190253.1|1065543_1066314_+	conserved phage C-terminal domain-containing protein	NA	A0A1W6JQ00	Staphylococcus_phage	100.0	6.4e-122
WP_031836908.1|1066323_1067103_+	ATP-binding protein	NA	A0A1X9H042	Staphylococcus_phage	98.8	1.6e-144
WP_031836909.1|1067096_1067255_+	hypothetical protein	NA	A0A2I6PDX0	Staphylococcus_phage	94.2	2.2e-21
WP_001123674.1|1067267_1067489_+	DUF3269 family protein	NA	A0A1W6JQ35	Staphylococcus_phage	100.0	1.7e-35
WP_031836910.1|1067498_1067906_+	RusA family crossover junction endodeoxyribonuclease	NA	A9CR74	Staphylococcus_phage	97.8	4.2e-72
WP_031836911.1|1067905_1068091_+	DUF3113 family protein	NA	M9NSS9	Staphylococcus_phage	96.7	1.6e-26
WP_000536051.1|1068091_1068454_+	hypothetical protein	NA	B7T0B4	Staphylococcus_virus	75.8	2.1e-46
WP_000022736.1|1068453_1068708_+	DUF3310 domain-containing protein	NA	Q6R831	Staphylococcus_virus	100.0	1.3e-42
WP_060474161.1|1068707_1068956_+	hypothetical protein	NA	A0A2K9VBX5	Staphylococcus_phage	100.0	1.2e-40
WP_000693989.1|1068969_1069176_+	hypothetical protein	NA	A0A2K9VBT9	Staphylococcus_phage	100.0	3.0e-34
WP_031836912.1|1069178_1069583_+	hypothetical protein	NA	A0A0E3T8H9	Staphylococcus_phage	98.5	1.6e-71
WP_000983953.1|1069579_1069774_+	hypothetical protein	NA	A0A0E3XCV8	Staphylococcus_phage	100.0	2.5e-27
WP_000982706.1|1069770_1070223_+	hypothetical protein	NA	A0A0E3XBJ3	Staphylococcus_phage	100.0	1.4e-81
WP_100183638.1|1070219_1070729_+	hypothetical protein	NA	A0A1X9H0D4	Staphylococcus_phage	98.2	1.3e-91
WP_000197967.1|1070725_1071136_+	hypothetical protein	NA	C8CH13	Staphylococcus_phage	100.0	2.3e-70
WP_001066444.1|1071128_1071665_+	dUTP diphosphatase	NA	A0A1X9H0S5	Staphylococcus_phage	100.0	1.4e-96
WP_100183639.1|1071701_1071989_+	DUF1381 domain-containing protein	NA	Q4ZAB6	Staphylococcus_virus	95.8	7.6e-44
WP_000608276.1|1071981_1072218_+	hypothetical protein	NA	A0A2I6PEM4	Staphylococcus_phage	94.9	2.0e-34
WP_001613443.1|1072207_1072597_+	phage protein	NA	M9QX07	Staphylococcus_phage	93.0	1.6e-60
WP_000595257.1|1072593_1072767_+	transcriptional activator RinB	NA	Q4ZBK0	Staphylococcus_phage	100.0	6.4e-22
WP_033860200.1|1072767_1072914_+	hypothetical protein	NA	A0A059T5A8	Staphylococcus_phage	97.9	6.4e-15
WP_000058632.1|1072928_1073348_+	transcriptional regulator	NA	I1W651	Staphylococcus_phage	100.0	8.1e-71
WP_031883675.1|1073534_1073975_+|terminase	terminase small subunit	terminase	I1W650	Staphylococcus_phage	99.3	1.8e-73
WP_000169946.1|1073961_1075239_+|terminase	PBSX family phage terminase large subunit	terminase	A0EWS5	Staphylococcus_virus	100.0	3.0e-249
WP_100183640.1|1075249_1076785_+|portal	phage portal protein	portal	A1KX25	Staphylococcus_virus	99.2	6.0e-289
WP_025380771.1|1076791_1077787_+|capsid	minor capsid protein	capsid	E0Y3K7	Staphylococcus_virus	97.3	1.3e-180
WP_153095539.1|1077868_1078042_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000354305.1|1078173_1078788_+	DUF4355 domain-containing protein	NA	I1W646	Staphylococcus_phage	100.0	2.9e-40
WP_001609089.1|1078801_1079776_+|capsid	phage major capsid protein	capsid	I1W645	Staphylococcus_phage	98.5	7.7e-181
WP_001609090.1|1079797_1080085_+	hypothetical protein	NA	E9LT47	Staphylococcus_phage	98.9	6.8e-45
WP_000208959.1|1080093_1080426_+|head,tail	phage head-tail connector protein	head,tail	E0Y3L2	Staphylococcus_virus	100.0	7.1e-54
WP_001268304.1|1080422_1080725_+	hypothetical protein	NA	E0Y3L3	Staphylococcus_virus	96.0	2.8e-49
WP_001017811.1|1080724_1081072_+	HK97 gp10 family phage protein	NA	I1W643	Staphylococcus_phage	100.0	5.3e-60
WP_000188652.1|1081083_1081467_+	hypothetical protein	NA	E0Y3L5	Staphylococcus_virus	100.0	2.6e-68
WP_000002583.1|1081485_1082067_+|tail	phage major tail protein, TP901-1 family	tail	Q8SDU0	Staphylococcus_phage	100.0	4.9e-106
WP_001100163.1|1082128_1082494_+	hypothetical protein	NA	Q8SDT9	Staphylococcus_phage	100.0	2.8e-59
WP_100183641.1|1082523_1082868_+	hypothetical protein	NA	A0A0F6N3F7	Staphylococcus_phage	99.1	1.2e-56
WP_033860197.1|1082884_1086349_+	membrane protein	NA	Q4ZDU6	Staphylococcus_virus	91.9	3.9e-251
WP_000350684.1|1086361_1087309_+|tail	phage tail family protein	tail	A0EWU0	Staphylococcus_virus	100.0	3.6e-183
WP_033860195.1|1087317_1089219_+|tail	phage tail protein	tail	Q8SDT5	Staphylococcus_phage	99.8	0.0e+00
WP_033860193.1|1089233_1091144_+	hypothetical protein	NA	A0A0F6N4K2	Staphylococcus_phage	99.2	0.0e+00
WP_000259602.1|1091143_1092967_+|plate	phage baseplate upper protein	plate	A0A0F6N3G2	Staphylococcus_phage	99.7	0.0e+00
WP_031764626.1|1092966_1093344_+	DUF2977 domain-containing protein	NA	W5R9M2	Staphylococcus_phage	98.4	5.8e-60
WP_015990323.1|1093353_1093527_+	XkdX family protein	NA	B2ZZ00	Staphylococcus_phage	100.0	1.0e-27
WP_000466784.1|1093567_1093867_+	DUF2951 domain-containing protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
WP_033860144.1|1094003_1095902_+	glucosaminidase domain-containing protein	NA	B2ZZ02	Staphylococcus_phage	98.6	0.0e+00
WP_033860145.1|1095914_1097087_+|plate	BppU family phage baseplate upper protein	plate	A0A2I6PCW8	Staphylococcus_phage	99.2	4.1e-197
WP_015978410.1|1097092_1097488_+	hypothetical protein	NA	A0A2H4PQP8	Staphylococcus_phage	100.0	2.1e-68
WP_000354132.1|1097543_1097981_+|holin	phage holin	holin	A0A2H4PQP0	Staphylococcus_phage	100.0	4.1e-73
WP_015978404.1|1097961_1099407_+	SH3 domain-containing protein	NA	A0A2H4PQR3	Staphylococcus_phage	100.0	8.2e-296
WP_000344116.1|1099803_1100115_+	DUF3467 domain-containing protein	NA	A0A2H4PQQ9	Staphylococcus_phage	100.0	4.1e-51
WP_001251275.1|1100101_1100485_+	hypothetical protein	NA	A0A2H4PQP6	Staphylococcus_phage	100.0	1.6e-65
WP_001041586.1|1100668_1102606_-	heme uptake protein IsdB	NA	NA	NA	NA	NA
WP_000160859.1|1102808_1103861_-	LPXTG-anchored heme-scavenging protein IsdA	NA	NA	NA	NA	NA
WP_100183642.1|1104069_1104765_+	heme uptake protein IsdC	NA	NA	NA	NA	NA
WP_001246698.1|1104751_1105828_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001220199.1|1105824_1106703_+	heme ABC transporter substrate-binding protein IsdE	NA	NA	NA	NA	NA
WP_001548422.1|1106712_1107681_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_088607912.1|1107742_1108477_+	class B sortase	NA	NA	NA	NA	NA
WP_000670950.1|1108495_1108819_+	staphylobilin-forming heme oxygenase IsdG	NA	NA	NA	NA	NA
WP_001788617.1|1108855_1108963_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000435374.1|1109196_1109937_+	RNA methyltransferase	NA	NA	NA	NA	NA
WP_000003559.1|1110317_1111376_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2I2L4E3	Orpheovirus	35.5	1.9e-31
WP_000908981.1|1111375_1113778_+|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
>prophage 5
NZ_CP022290	Staphylococcus aureus subsp. aureus strain EDCC5458 chromosome, complete genome	2848525	1486634	1553689	2848525	plate,tail,terminase,protease,head,transposase,tRNA,portal,holin,capsid	Staphylococcus_phage(50.0%)	71	NA	NA
WP_000858789.1|1486634_1487927_-|tRNA	asparagine--tRNA ligase	tRNA	A0A2P1EMB4	Moumouvirus	30.0	1.9e-54
WP_000525078.1|1488248_1490942_-	ATP-dependent helicase DinG	NA	A0A1X9I5C8	Streptococcus_phage	34.4	8.2e-47
WP_000049919.1|1490965_1491937_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_000361544.1|1491923_1493126_-|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	42.5	3.2e-35
WP_000690027.1|1493130_1494273_-	N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA	NA	NA	NA	NA	NA
WP_000839926.1|1494513_1494831_-	nucleotide pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_001827022.1|1495167_1495848_-	zinc metallopeptidase	NA	NA	NA	NA	NA
WP_000152734.1|1495919_1496507_-	DUF1405 domain-containing protein	NA	NA	NA	NA	NA
WP_000004947.1|1496496_1497072_-	YpiB family protein	NA	G3MAV7	Bacillus_virus	27.2	2.7e-08
WP_000389524.1|1497085_1498330_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000245895.1|1498336_1499635_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_000776323.1|1499644_1500709_-	3-dehydroquinate synthase	NA	NA	NA	NA	NA
WP_001269929.1|1500734_1501901_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.1	7.6e-34
WP_000789522.1|1502286_1502487_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000442480.1|1502695_1503145_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.8	2.4e-28
WP_001096471.1|1503236_1504196_-	polyprenyl synthetase family protein	NA	A0A1V0SE37	Indivirus	24.4	1.3e-10
WP_000774684.1|1504197_1504923_-	demethylmenaquinone methyltransferase	NA	NA	NA	NA	NA
WP_000450553.1|1504925_1505498_-	heptaprenyl diphosphate synthase component 1	NA	NA	NA	NA	NA
WP_001043863.1|1505928_1506201_-	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	73.3	4.2e-28
WP_000161738.1|1506371_1507370_-	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_000165530.1|1507386_1508697_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_000133954.1|1508918_1510094_-	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_001789944.1|1510350_1510542_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001789945.1|1510658_1510775_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000644391.1|1510805_1511465_-	(d)CMP kinase	NA	NA	NA	NA	NA
WP_000681756.1|1511541_1512510_+	asparaginase	NA	NA	NA	NA	NA
WP_088607938.1|1512624_1513611_-	YpdA family putative bacillithiol disulfide reductase	NA	NA	NA	NA	NA
WP_001789943.1|1513771_1513888_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000069282.1|1514012_1515473_-	elastin-binding protein EbpS	NA	NA	NA	NA	NA
WP_100183650.1|1515625_1517005_-	ATP-dependent DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	33.6	2.9e-56
WP_001163801.1|1516994_1517948_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_054104773.1|1518055_1518304_+	ferredoxin	NA	A0A127AYY7	Bacillus_phage	48.0	1.9e-14
WP_001186912.1|1518409_1518955_-	ECF transporter S component	NA	NA	NA	NA	NA
WP_001789947.1|1519233_1519353_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000913219.1|1519551_1520466_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_001033757.1|1520480_1520687_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000472936.1|1520679_1521618_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_000476873.1|1521675_1522593_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_170267452.1|1522683_1522899_-	hypothetical protein	NA	A0ZS61	Staphylococcus_virus	100.0	1.5e-25
WP_000675478.1|1523275_1524112_-	hypothetical protein	NA	D2JLG6	Staphylococcus_phage	100.0	8.4e-152
WP_000909210.1|1524727_1526182_-	N-acetylmuramoyl-L-alanine amidase	NA	Q8SDN4	Staphylococcus_virus	99.8	7.5e-289
WP_000339144.1|1526192_1526495_-|holin	phage holin	holin	B7T0L0	Staphylococcus_virus	100.0	4.1e-48
WP_000466784.1|1526630_1526930_-	DUF2951 domain-containing protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
WP_000916020.1|1526975_1527140_-	XkdX family protein	NA	A0A2I6PES4	Staphylococcus_phage	100.0	4.9e-24
WP_001166599.1|1527132_1527522_-	DUF2977 domain-containing protein	NA	A0A2I6PER1	Staphylococcus_phage	100.0	2.2e-62
WP_000067148.1|1527521_1528988_-|plate	phage baseplate upper protein	plate	Q8SDN8	Staphylococcus_virus	100.0	3.4e-257
WP_000429551.1|1528987_1530898_-	minor structural protein	NA	A0A2I6PF35	Staphylococcus_phage	100.0	0.0e+00
WP_000179862.1|1530913_1531204_-	hypothetical protein	NA	Q8SDP0	Staphylococcus_virus	100.0	2.1e-49
WP_000384461.1|1531203_1532787_-|tail	phage tail protein	tail	Q8SDP1	Staphylococcus_virus	99.8	1.2e-308
WP_001190533.1|1532795_1533620_-|tail	phage tail family protein	tail	A0A2I6PER3	Staphylococcus_phage	100.0	4.1e-159
WP_001003443.1|1533619_1539820_-|tail	phage tail tape measure protein	tail	Q8SDP3	Staphylococcus_virus	100.0	0.0e+00
WP_000438833.1|1539833_1539992_-	hypothetical protein	NA	A0A2I6PES8	Staphylococcus_phage	100.0	1.2e-19
WP_000589167.1|1540033_1540384_-	hypothetical protein	NA	A0A2I6PEQ2	Staphylococcus_phage	100.0	1.1e-55
WP_000169128.1|1540441_1540897_-	Ig domain-containing protein	NA	A0A2I6PF45	Staphylococcus_phage	100.0	1.3e-77
WP_000807536.1|1540988_1541630_-|tail	tail protein	tail	A0A2I6PEP6	Staphylococcus_phage	100.0	5.9e-121
WP_001023806.1|1541664_1542060_-	DUF3168 domain-containing protein	NA	A0A2I6PEQ4	Staphylococcus_phage	100.0	8.8e-67
WP_000110023.1|1542060_1542462_-	hypothetical protein	NA	A0A2I6PF54	Staphylococcus_phage	100.0	8.1e-68
WP_000395498.1|1542458_1542791_-	hypothetical protein	NA	A0A2I6PES3	Staphylococcus_phage	100.0	4.1e-57
WP_000050973.1|1542802_1543081_-|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2I6PEQ1	Staphylococcus_phage	100.0	2.1e-46
WP_001142734.1|1543149_1544313_-|capsid	phage major capsid protein	capsid	A0A2I6PEQ3	Staphylococcus_phage	100.0	1.2e-217
WP_000061866.1|1544324_1545098_-|protease	Clp protease ClpP	protease	A0A2I6PEQ7	Staphylococcus_phage	100.0	2.4e-137
WP_001100665.1|1545081_1546320_-|portal	phage portal protein	portal	A0A2I6PF26	Staphylococcus_phage	100.0	1.2e-234
WP_100183651.1|1546324_1548016_-|terminase	terminase large subunit	terminase	Q4ZD20	Staphylococcus_virus	99.8	0.0e+00
WP_000778933.1|1548005_1548311_-|terminase	P27 family phage terminase small subunit	terminase	A0A2I6PEQ6	Staphylococcus_phage	100.0	2.9e-49
WP_000160683.1|1548432_1548747_-	HNH endonuclease	NA	Q8SDQ2	Staphylococcus_virus	100.0	1.9e-56
WP_000513703.1|1548903_1549341_-	transcriptional regulator	NA	A0A2K9VBV2	Staphylococcus_phage	99.3	7.9e-77
WP_100183652.1|1550504_1551041_-|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	43.6	5.8e-29
WP_000746375.1|1551021_1551525_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_001255379.1|1551633_1551990_-	cystatin-like fold lipoprotein	NA	NA	NA	NA	NA
WP_000810440.1|1552045_1552636_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000247465.1|1552642_1553689_-	CHAP domain-containing protein	NA	A0A1X9I9L1	Staphylococcus_phage	36.9	8.1e-19
>prophage 6
NZ_CP022290	Staphylococcus aureus subsp. aureus strain EDCC5458 chromosome, complete genome	2848525	1565235	1588227	2848525	integrase	Staphylococcus_phage(79.49%)	40	1569388:1569402	1588616:1588630
WP_000665203.1|1565235_1565526_-	VRR-NUC domain-containing protein	NA	A0A2I6PEN7	Staphylococcus_phage	100.0	6.5e-51
WP_011447017.1|1565659_1565764_+	hypothetical protein	NA	Q4ZCF8	Staphylococcus_virus	100.0	9.4e-13
WP_000884857.1|1565866_1568314_-	virulence-associated E family protein	NA	Q4ZCG0	Staphylococcus_virus	99.9	0.0e+00
WP_000265258.1|1568365_1568566_-	DUF1514 family protein	NA	A0A2I6PF41	Staphylococcus_phage	100.0	2.9e-26
WP_000237866.1|1568633_1568786_-	transcriptional activator RinB	NA	A0A2I6PF16	Staphylococcus_phage	98.0	5.8e-19
WP_001125015.1|1568788_1568989_-	hypothetical protein	NA	A0A2I6PF22	Staphylococcus_phage	100.0	1.8e-28
WP_000195837.1|1568963_1569152_-	DUF1381 domain-containing protein	NA	Q4ZCG4	Staphylococcus_virus	100.0	1.6e-26
WP_000185654.1|1569188_1569731_-	dUTP pyrophosphatase	NA	Q4ZD81	Staphylococcus_virus	100.0	1.5e-96
1569388:1569402	attL	CCATCTTCTAATTCA	NA	NA	NA	NA
WP_001065023.1|1569735_1569972_-	DUF1024 family protein	NA	C8CH04	Staphylococcus_phage	100.0	1.1e-35
WP_000144708.1|1569964_1570273_-	hypothetical protein	NA	Q4ZBK6	Staphylococcus_phage	100.0	8.1e-52
WP_000979209.1|1570269_1570617_-	hypothetical protein	NA	D2JGL4	Staphylococcus_phage	100.0	5.9e-59
WP_000695759.1|1570613_1571015_-	hypothetical protein	NA	A0A0N7E0T5	Staphylococcus_phage	100.0	7.0e-72
WP_000693987.1|1571017_1571224_-	hypothetical protein	NA	A0A0N9BAW9	Staphylococcus_phage	100.0	3.0e-34
WP_015968801.1|1571237_1571486_-	PVL orf 51-like protein	NA	Q8SDR2	Staphylococcus_virus	100.0	1.8e-41
WP_000235381.1|1571494_1571695_-	hypothetical protein	NA	A0A2I6PF32	Staphylococcus_phage	100.0	1.3e-29
WP_000111488.1|1571697_1571955_-	DUF3310 domain-containing protein	NA	A0A2I6PF10	Staphylococcus_phage	100.0	5.7e-43
WP_000113981.1|1571954_1572356_-	PVL family protein	NA	A0A2I6PF14	Staphylococcus_phage	100.0	1.2e-68
WP_001164629.1|1572355_1572541_-	DUF3113 family protein	NA	A0A2I6PEM8	Staphylococcus_phage	100.0	7.0e-27
WP_001796208.1|1572553_1574506_-	DNA polymerase	NA	A0A2I6PF18	Staphylococcus_phage	100.0	0.0e+00
WP_000645042.1|1574574_1575132_-	DUF2815 family protein	NA	A0A2I6PF05	Staphylococcus_phage	100.0	1.8e-97
WP_000762532.1|1575157_1576324_-	DUF2800 domain-containing protein	NA	A0A2I6PDL4	Staphylococcus_phage	100.0	8.3e-222
WP_000279445.1|1576320_1576683_-	hypothetical protein	NA	A0A2K9VBV1	Staphylococcus_phage	100.0	6.4e-56
WP_000175003.1|1576697_1577021_-	hypothetical protein	NA	A7TWG2	Staphylococcus_phage	99.1	2.5e-51
WP_000066008.1|1577099_1577261_-	DUF1270 family protein	NA	A0A2I6PDF7	Staphylococcus_phage	96.2	1.2e-19
WP_001124198.1|1577272_1577536_-	helix-turn-helix domain-containing protein	NA	A0A2I6PEL8	Staphylococcus_phage	100.0	2.5e-46
WP_001036303.1|1577560_1577776_-	hypothetical protein	NA	A0A2I6PDN5	Staphylococcus_phage	95.8	5.5e-31
WP_000549549.1|1577831_1578062_+	hypothetical protein	NA	A0A2I6PE22	Staphylococcus_phage	97.4	1.8e-35
WP_001001358.1|1578058_1578235_-	hypothetical protein	NA	B7T0F9	Staphylococcus_virus	98.3	1.3e-25
WP_001115060.1|1578323_1578515_-	helix-turn-helix transcriptional regulator	NA	A0A2I6PEL6	Staphylococcus_phage	100.0	2.3e-28
WP_000429766.1|1578675_1579005_+	helix-turn-helix transcriptional regulator	NA	A0A2I6PEN2	Staphylococcus_phage	100.0	3.2e-54
WP_000524999.1|1579017_1579479_+	hypothetical protein	NA	A0A2I6PEK4	Staphylococcus_phage	98.7	3.7e-85
WP_000755721.1|1579496_1579931_+	hypothetical protein	NA	A0A2I6PEM0	Staphylococcus_phage	100.0	1.2e-24
WP_000449657.1|1579959_1580355_+	hypothetical protein	NA	A0A2I6PEJ7	Staphylococcus_phage	99.2	1.1e-69
WP_001013104.1|1580444_1580591_+	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	89.6	1.1e-14
WP_000191458.1|1580587_1581202_-	hypothetical protein	NA	A7TW88	Staphylococcus_phage	99.5	8.8e-106
WP_000264751.1|1581327_1582533_+|integrase	site-specific integrase	integrase	A0A2I6PEN0	Staphylococcus_phage	100.0	7.7e-223
WP_001804554.1|1582575_1584603_-	hypothetical protein	NA	B5WZK7	Staphylococcus_phage	97.2	3.4e-114
WP_001548912.1|1584595_1585525_-	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_000987769.1|1585769_1587521_-	two-component system sensor histidine kinase SrrB	NA	A0A1V0SGX0	Hokovirus	33.6	1.7e-21
WP_000064078.1|1587501_1588227_-	two-component system response regulator SrrA	NA	W8CYM9	Bacillus_phage	43.0	3.5e-45
1588616:1588630	attR	CCATCTTCTAATTCA	NA	NA	NA	NA
>prophage 7
NZ_CP022290	Staphylococcus aureus subsp. aureus strain EDCC5458 chromosome, complete genome	2848525	1643351	1651663	2848525	tRNA	Staphylococcus_phage(16.67%)	7	NA	NA
WP_001213908.1|1643351_1644137_-	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
WP_000924214.1|1644262_1645153_-	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	2.0e-26
WP_001062180.1|1645162_1646509_-	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	33.7	5.3e-55
WP_000683931.1|1646622_1647723_-	Nif3-like dinuclear metal center hexameric protein	NA	A0A1S5V250	Saudi_moumouvirus	29.6	5.2e-08
WP_000624584.1|1647725_1648403_-|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_001283055.1|1648533_1649640_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_100183656.1|1649863_1651663_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	35.8	1.3e-53
>prophage 8
NZ_CP022290	Staphylococcus aureus subsp. aureus strain EDCC5458 chromosome, complete genome	2848525	1720801	1729844	2848525	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
WP_000364542.1|1720801_1721320_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
WP_000594993.1|1721341_1723615_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.8	1.2e-62
WP_000749795.1|1723817_1726097_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_001160682.1|1726371_1726632_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_001112045.1|1726650_1727790_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_001019172.1|1727812_1728838_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001005767.1|1728839_1729844_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 9
NZ_CP022290	Staphylococcus aureus subsp. aureus strain EDCC5458 chromosome, complete genome	2848525	1855278	1935006	2848525	protease,transposase,tRNA	Staphylococcus_phage(93.22%)	74	NA	NA
WP_100183664.1|1855278_1861839_-	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	98.1	2.0e-304
WP_000836465.1|1862164_1862476_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	100.0	1.6e-52
WP_088607888.1|1862497_1864915_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.1	0.0e+00
WP_001025061.1|1865202_1866384_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	100.0	5.6e-218
WP_000526539.1|1866493_1867447_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
WP_000764419.1|1867443_1868007_+	class I SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
WP_000757543.1|1868126_1868528_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000266096.1|1870106_1870934_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_001790712.1|1870936_1871056_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001196354.1|1871167_1872169_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.7	9.0e-185
WP_001008551.1|1872290_1872755_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	99.4	5.8e-70
WP_001159022.1|1872767_1873949_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	99.7	6.6e-227
WP_000493892.1|1873959_1874592_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	99.5	1.7e-112
WP_000077344.1|1874598_1875642_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	99.4	6.3e-197
WP_001261677.1|1876122_1877625_-	FAD/NAD(P)-binding protein	NA	A0A2H4PQX2	Staphylococcus_phage	100.0	2.3e-30
WP_054104810.1|1878147_1878462_+	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	99.0	4.4e-53
WP_000989121.1|1878461_1879754_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	99.5	5.0e-228
WP_000163235.1|1879771_1880167_+	arsenate reductase (thioredoxin)	NA	A0A2H4PQT9	Staphylococcus_phage	100.0	6.3e-73
WP_001032833.1|1880461_1881316_-	glucosaminidase domain-containing protein	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_000384171.1|1881591_1881816_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000671052.1|1882014_1882485_+	RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	99.4	1.0e-82
WP_001153742.1|1882597_1883041_+	competence protein ComK	NA	NA	NA	NA	NA
WP_001030465.1|1883027_1883471_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	85.0	3.0e-55
WP_001168904.1|1883766_1884402_+|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_001096494.1|1884841_1885555_-	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_000091445.1|1885814_1886117_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001200542.1|1886372_1886738_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
WP_000623471.1|1886734_1887088_+	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	99.1	1.0e-21
WP_000453320.1|1889170_1890004_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	98.6	9.6e-156
WP_000366154.1|1890215_1891124_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	98.7	3.2e-136
WP_000933822.1|1891248_1892442_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.7	1.9e-218
WP_000109906.1|1892812_1894405_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
WP_000093392.1|1894540_1895026_-|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	35.4	4.9e-19
WP_002868962.1|1895400_1896147_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.4	7.1e-142
WP_000672014.1|1896151_1896625_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.1	4.7e-83
WP_000718107.1|1896690_1896948_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000778523.1|1896944_1897946_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.6	4.8e-186
WP_000348360.1|1897950_1899429_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.0	2.0e-281
WP_011443643.1|1899587_1900043_-	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	98.6	3.0e-79
WP_001795535.1|1900345_1900996_+	excalibur calcium-binding domain-containing protein	NA	A0A2H4PQM8	Staphylococcus_phage	88.4	2.7e-44
WP_000070653.1|1901076_1902072_+	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	96.4	7.1e-73
WP_000669046.1|1902147_1902774_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	82.7	7.1e-79
WP_000627551.1|1902814_1903159_+	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	92.0	6.3e-53
WP_000414205.1|1903256_1903808_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	94.1	1.0e-20
WP_000494956.1|1904025_1904667_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4PQN8	Staphylococcus_phage	93.2	2.6e-76
WP_000809857.1|1904780_1904966_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000375476.1|1904967_1905144_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000070811.1|1905154_1905538_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001549059.1|1906141_1906285_-|transposase	transposase	transposase	A0A2H4PQU1	Staphylococcus_phage	100.0	6.4e-20
WP_001801861.1|1906487_1906583_+	type I toxin-antitoxin system Fst family toxin PepA1	NA	NA	NA	NA	NA
WP_001791893.1|1906705_1906807_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001037045.1|1907154_1907532_-	DUF1433 domain-containing protein	NA	NA	NA	NA	NA
WP_000831218.1|1908052_1912165_-	ATP-binding protein	NA	A0A2H4PQT3	Staphylococcus_phage	100.0	0.0e+00
WP_000072576.1|1913014_1914214_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	99.7	5.5e-229
WP_000028659.1|1914206_1915763_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	99.4	2.3e-288
WP_001791797.1|1915926_1916061_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100183665.1|1916125_1916845_-|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	97.9	1.5e-128
WP_001038867.1|1916965_1917685_-|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	99.2	1.2e-130
WP_001039447.1|1917742_1918465_-|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	99.6	2.4e-131
WP_001039435.1|1918589_1919297_-|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	100.0	2.6e-130
WP_001092763.1|1920260_1920827_+	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	100.0	3.3e-99
WP_000586140.1|1921300_1921999_-	hypothetical protein	NA	A0A2H4PQH0	Staphylococcus_phage	94.4	3.8e-113
WP_000581552.1|1921995_1922757_-	lantibiotic immunity ABC transporter MutE/EpiE family permease subunit	NA	A0A2H4PQH2	Staphylococcus_phage	100.0	4.4e-131
WP_001096791.1|1922753_1923446_-	lantibiotic protection ABC transporter ATP-binding subunit	NA	A0A2H4PQG7	Staphylococcus_phage	100.0	6.2e-124
WP_000691541.1|1923468_1924842_-	S8 family serine peptidase	NA	A0A2H4PQH1	Staphylococcus_phage	100.0	2.9e-258
WP_000504439.1|1924851_1925370_-	flavoprotein	NA	A0A2H4PQG9	Staphylococcus_phage	100.0	2.0e-95
WP_000566596.1|1925385_1926630_-	lanthionine synthetase C family protein	NA	A0A2H4PQH9	Staphylococcus_phage	100.0	5.1e-238
WP_001092605.1|1926622_1929616_-	lantibiotic dehydratase	NA	A0A2H4PQG8	Staphylococcus_phage	97.3	0.0e+00
WP_000416756.1|1929680_1929824_-	gallidermin/nisin family lantibiotic	NA	A0A2H4PQH4	Staphylococcus_phage	80.9	5.3e-14
WP_000416759.1|1930560_1930704_-	gallidermin/nisin family lantibiotic	NA	NA	NA	NA	NA
WP_000782464.1|1930945_1931929_-	bi-component leukocidin LukED subunit D	NA	A0A2H4PQH7	Staphylococcus_phage	99.1	2.3e-185
WP_000473596.1|1931930_1932866_-	bi-component leukocidin LukED subunit E	NA	A0A2H4PQI5	Staphylococcus_phage	100.0	1.4e-174
WP_001790220.1|1933665_1934205_+	hypothetical protein	NA	Q4ZCB9	Staphylococcus_virus	76.8	2.0e-61
WP_000206350.1|1934217_1935006_+	DUF1828 domain-containing protein	NA	A0A2H4PQI0	Staphylococcus_phage	95.8	5.3e-140
>prophage 10
NZ_CP022290	Staphylococcus aureus subsp. aureus strain EDCC5458 chromosome, complete genome	2848525	2016622	2117982	2848525	tail,terminase,protease,head,integrase,tRNA,portal,holin,capsid	Staphylococcus_phage(88.46%)	118	2078770:2078787	2104098:2104115
WP_000545370.1|2016622_2018050_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	tRNA	NA	NA	NA	NA
WP_000027928.1|2018062_2019520_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	tRNA	NA	NA	NA	NA
WP_000170162.1|2019521_2019824_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_000957015.1|2020190_2021729_+	sodium/proline symporter PutP	NA	NA	NA	NA	NA
WP_000831698.1|2021817_2023017_-	CamS family sex pheromone protein	NA	NA	NA	NA	NA
WP_000774565.1|2023029_2025033_-	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	36.1	5.8e-114
WP_000992921.1|2025036_2027229_-	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	42.2	1.0e-135
WP_000272070.1|2027225_2027918_-	heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA	NA
WP_001165363.1|2028089_2028392_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000572878.1|2028500_2029796_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.9	1.6e-16
WP_000827748.1|2030656_2031823_+|protease	cysteine protease staphopain A	protease	NA	NA	NA	NA
WP_000434933.1|2031853_2032180_+	staphostatin A	NA	NA	NA	NA	NA
WP_000669862.1|2032471_2032645_-	NETI motif-containing protein	NA	NA	NA	NA	NA
WP_000011542.1|2032625_2033228_-	DUF2179 domain-containing protein	NA	NA	NA	NA	NA
WP_000040873.1|2033498_2034320_-	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.7	1.8e-69
WP_000284431.1|2034312_2035782_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	45.1	4.5e-108
WP_000897635.1|2035965_2037042_+	nitric oxide synthase oxygenase	NA	NA	NA	NA	NA
WP_001177817.1|2037061_2037856_+	prephenate dehydratase	NA	NA	NA	NA	NA
WP_001802312.1|2037927_2038035_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000323161.1|2038045_2039608_-	SLC13 family permease	NA	NA	NA	NA	NA
WP_000275730.1|2039812_2040910_-	pectate lyase	NA	U5PWM6	Bacillus_phage	34.6	1.9e-47
WP_000149686.1|2041281_2041842_+	cysteine hydrolase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
WP_001140871.1|2041894_2042824_+	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA	NA
WP_001790680.1|2043018_2043192_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001021214.1|2043243_2044623_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_000181322.1|2044742_2045771_-	lactonase family protein	NA	NA	NA	NA	NA
WP_000205106.1|2046040_2046442_+	YolD-like family protein	NA	U3PG23	Staphylococcus_phage	42.9	6.0e-23
WP_000267034.1|2047014_2047188_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001188077.1|2047638_2048679_+	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_000713072.1|2048735_2049578_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_001033971.1|2049574_2050132_-	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_000966288.1|2050191_2050716_-	membrane protein	NA	NA	NA	NA	NA
WP_000182842.1|2050836_2051400_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_001221651.1|2051465_2052206_-	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA	NA
WP_000763048.1|2052205_2053078_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	35.2	6.1e-28
WP_000645727.1|2053074_2053755_-	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
WP_000991302.1|2053755_2054652_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	1.1e-16
WP_000691584.1|2054648_2055029_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000681968.1|2055292_2055469_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000990056.1|2055711_2055810_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001068542.1|2056009_2057296_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_054104836.1|2057920_2059675_-	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_000669789.1|2060632_2060812_+	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	100.0	2.2e-25
WP_001791826.1|2061122_2061383_+	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000702263.1|2061434_2061785_-	complement inhibitor SCIN-A	NA	A0A1P8L6B0	Staphylococcus_phage	100.0	7.5e-54
WP_031865878.1|2063281_2063773_-	staphylokinase	NA	A0A1X9H028	Staphylococcus_phage	99.4	1.6e-86
WP_000861038.1|2063963_2064719_-	CHAP domain-containing protein	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
WP_000611512.1|2064730_2064985_-|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
WP_001791821.1|2065036_2065144_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011447039.1|2065196_2065373_-|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	98.3	2.2e-22
WP_000539688.1|2065522_2065819_-	DUF2951 domain-containing protein	NA	D2JLG2	Staphylococcus_phage	100.0	2.9e-46
WP_100183668.1|2065876_2066164_-	hypothetical protein	NA	D2JLG1	Staphylococcus_phage	98.9	6.4e-43
WP_001153681.1|2066210_2066363_-	hypothetical protein	NA	D2JLG0	Staphylococcus_phage	100.0	5.2e-20
WP_000582158.1|2066352_2070138_-	hypothetical protein	NA	A0A1X9H0H3	Staphylococcus_phage	98.4	0.0e+00
WP_000567408.1|2070153_2071638_-|tail	phage tail family protein	tail	A0A2I6PDJ0	Staphylococcus_phage	100.0	1.2e-297
WP_100183669.1|2071634_2076164_-|tail	phage tail tape measure protein	tail	A0A1X9H084	Staphylococcus_phage	99.9	0.0e+00
WP_001549167.1|2076220_2076358_-	hypothetical protein	NA	A0A2I6PDX7	Staphylococcus_phage	100.0	3.4e-18
WP_001096355.1|2076408_2076759_-	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
WP_072050172.1|2076808_2077033_-	Ig-like domain-containing protein	NA	A0A075LYE8	Staphylococcus_phage	98.6	8.8e-32
WP_000268741.1|2077074_2077719_-|tail	phage tail protein	tail	W5R9H4	Staphylococcus_phage	100.0	6.5e-120
WP_000565498.1|2077719_2078127_-	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
WP_000114225.1|2078123_2078528_-	HK97 gp10 family phage protein	NA	A0A2I6PDJ6	Staphylococcus_phage	100.0	4.3e-69
WP_000755150.1|2078524_2078887_-|head,tail	head-tail adaptor protein	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
2078770:2078787	attL	ATAATTTTTCTTCTTTTT	NA	NA	NA	NA
WP_000150936.1|2078870_2079155_-|head,tail	phage head-tail adapter protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
WP_000238236.1|2079144_2079429_-	hypothetical protein	NA	A0A2I6PDJ3	Staphylococcus_phage	100.0	1.8e-45
WP_000154555.1|2079448_2080594_-|capsid	phage major capsid protein	capsid	A0A1X9H072	Staphylococcus_phage	100.0	5.6e-215
WP_000861914.1|2080617_2081355_-|protease	Clp protease ClpP	protease	C8CH20	Staphylococcus_phage	100.0	2.3e-129
WP_054104817.1|2081338_2082526_-|portal	phage portal protein	portal	A0A2I6PDI1	Staphylococcus_phage	99.7	3.0e-219
WP_000625088.1|2082541_2084203_-|terminase	terminase large subunit	terminase	A0A2I6PDJ8	Staphylococcus_phage	100.0	0.0e+00
WP_000402904.1|2084199_2084544_-	hypothetical protein	NA	G4KNP9	Staphylococcus_phage	100.0	9.4e-57
WP_000988336.1|2084674_2084974_-	HNH endonuclease	NA	A0EWY8	Staphylococcus_phage	100.0	4.6e-52
WP_000590126.1|2085205_2085622_-	hypothetical protein	NA	A0A1X9H0U8	Staphylococcus_phage	100.0	2.9e-76
WP_000265041.1|2085649_2085850_-	DUF1514 family protein	NA	R9QT57	Staphylococcus_phage	100.0	1.1e-28
WP_000595265.1|2085849_2085999_-	transcriptional activator RinB	NA	A0A1W6JPZ2	Staphylococcus_phage	100.0	4.8e-18
WP_000195820.1|2085995_2086202_-	DUF1381 domain-containing protein	NA	A0A1X9H0C2	Staphylococcus_phage	100.0	1.3e-21
WP_001066444.1|2086238_2086775_-	dUTP diphosphatase	NA	A0A1X9H0S5	Staphylococcus_phage	100.0	1.4e-96
WP_000197967.1|2086767_2087178_-	hypothetical protein	NA	C8CH13	Staphylococcus_phage	100.0	2.3e-70
WP_001105598.1|2087174_2087684_-	hypothetical protein	NA	A0A1X9H0D4	Staphylococcus_phage	100.0	3.2e-93
WP_000982711.1|2087680_2088130_-	hypothetical protein	NA	A0A2I6PDH2	Staphylococcus_phage	99.3	2.1e-80
WP_000131366.1|2088194_2088437_-	hypothetical protein	NA	A0EWX8	Staphylococcus_phage	100.0	3.9e-41
WP_000101274.1|2088440_2088809_-	hypothetical protein	NA	W5RAK8	Staphylococcus_phage	100.0	8.2e-51
WP_000401964.1|2088821_2089226_-	RusA family crossover junction endodeoxyribonuclease	NA	A0A0E3XBN4	Staphylococcus_phage	100.0	1.4e-72
WP_000338528.1|2089234_2089453_-	hypothetical protein	NA	A0A1P8L6E4	Staphylococcus_phage	100.0	1.4e-37
WP_016047539.1|2089459_2090344_-	DnaD domain protein	NA	I1W658	Staphylococcus_phage	100.0	1.1e-138
WP_024937184.1|2090373_2090844_-	single-stranded DNA-binding protein	NA	A0A1P8L6D9	Staphylococcus_phage	95.5	1.3e-77
WP_071621397.1|2090844_2091462_-	MBL fold metallo-hydrolase	NA	S4SWA4	Staphylococcus_phage	100.0	9.1e-87
WP_000138481.1|2091542_2092463_-	recombinase RecT	NA	A0A1V0E5D7	Staphylococcus_phage	100.0	1.0e-166
WP_000700562.1|2092464_2094408_-	AAA family ATPase	NA	A0A2I6PDH3	Staphylococcus_phage	99.2	0.0e+00
WP_001205732.1|2094416_2094680_-	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
WP_031824013.1|2094688_2094949_-	DUF1108 family protein	NA	A0A1P8L6F5	Staphylococcus_phage	98.8	1.2e-43
WP_000165371.1|2094953_2095256_-	DUF2482 family protein	NA	A0A1P8L6F8	Staphylococcus_phage	100.0	7.0e-48
WP_000066020.1|2095350_2095512_-	DUF1270 domain-containing protein	NA	A0A2I6PDF7	Staphylococcus_phage	100.0	1.9e-20
WP_001120197.1|2095508_2095829_-	DUF771 domain-containing protein	NA	A0A2I6PDH6	Staphylococcus_phage	100.0	1.5e-56
WP_000762521.1|2095883_2096264_+	DUF2513 domain-containing protein	NA	Q9T1Z5	Staphylococcus_phage	100.0	1.2e-68
WP_001148862.1|2096250_2096448_-	hypothetical protein	NA	O80075	Staphylococcus_phage	87.7	3.5e-24
WP_001148342.1|2096463_2097219_-	phage antirepressor KilAC domain-containing protein	NA	A0A0H4J326	Staphylococcus_phage	99.6	7.4e-139
WP_000435341.1|2097837_2098098_-	transcriptional regulator	NA	A7TW91	Staphylococcus_phage	100.0	2.7e-40
WP_000639926.1|2098110_2098353_-	DUF739 family protein	NA	A0A075LZJ3	Staphylococcus_phage	100.0	2.8e-39
WP_001083975.1|2098516_2099233_+	helix-turn-helix domain-containing protein	NA	A0A1X9H038	Staphylococcus_phage	100.0	5.4e-131
WP_001557601.1|2099244_2100099_+	restriction endonuclease	NA	A0A1X9H037	Staphylococcus_phage	100.0	7.3e-151
WP_000345949.1|2100172_2100319_+	hypothetical protein	NA	A0A1X9H032	Staphylococcus_phage	100.0	3.3e-19
WP_000100503.1|2100315_2100501_+	hypothetical protein	NA	A0A1X9H0K5	Staphylococcus_phage	100.0	1.1e-24
WP_000705240.1|2100700_2100883_+	hypothetical protein	NA	A0A2I6PDR4	Staphylococcus_phage	100.0	5.3e-27
WP_001549185.1|2100960_2101674_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A1X9H026	Staphylococcus_phage	100.0	5.0e-129
WP_000857198.1|2101864_2102902_+|integrase	site-specific integrase	integrase	A0A1X9H022	Staphylococcus_phage	100.0	2.6e-179
WP_000595324.1|2104020_2105037_-	bi-component leukocidin LukGH subunit G	NA	A0A2I6PER8	Staphylococcus_phage	29.0	1.1e-25
2104098:2104115	attR	ATAATTTTTCTTCTTTTT	NA	NA	NA	NA
WP_000791407.1|2105058_2106114_-	bi-component leukocidin LukGH subunit H	NA	A0A1X9IGW5	Staphylococcus_phage	34.3	2.8e-35
WP_000206638.1|2106548_2107772_+	ArgE/DapE family deacylase	NA	NA	NA	NA	NA
WP_000812008.1|2108143_2108989_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_000825510.1|2109050_2109962_-	iron-hydroxamate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_001045079.1|2110122_2111430_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000022887.1|2112282_2112726_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_011447041.1|2112831_2113269_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001293058.1|2113586_2114177_-|terminase	terminase small subunit	terminase	Q4ZE85	Staphylococcus_phage	95.8	1.1e-97
WP_000128898.1|2114173_2114386_-	hypothetical protein	NA	Q4ZE86	Staphylococcus_phage	74.3	1.1e-23
WP_000240645.1|2115087_2116704_-	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.7	3.4e-157
WP_000917289.1|2116779_2117064_-	co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
WP_000197635.1|2117238_2117982_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
