assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002796525.1_ASM279652v1	NZ_CP024885	Klebsiella aerogenes strain AR_0009 chromosome, complete genome	1	656117-656247	1	CRISPRCasFinder	no		cas3,csa3,DEDDh,WYL,DinG	Orphan	AACATACGGGTTTTTCCTGTATAT	24	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,DEDDh,WYL,DinG	NA|93aa|up_9|NZ_CP024885.1_647673_647952_-,NA|67aa|up_7|NZ_CP024885.1_650136_650337_-,NA|123aa|up_5|NZ_CP024885.1_651525_651894_-,NA|74aa|up_4|NZ_CP024885.1_651890_652112_-,NA|106aa|up_3|NZ_CP024885.1_652779_653097_-,NA|74aa|up_2|NZ_CP024885.1_653093_653315_-,NA|80aa|up_1|NZ_CP024885.1_653314_653554_-,NA|149aa|down_1|NZ_CP024885.1_657774_658221_-,NA|143aa|down_2|NZ_CP024885.1_658281_658710_-	NA|93aa|up_9|NZ_CP024885.1_647673_647952_-	NA	NA|622aa|up_8|NZ_CP024885.1_648278_650144_-	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed	NA|67aa|up_7|NZ_CP024885.1_650136_650337_-	NA	NA|345aa|up_6|NZ_CP024885.1_650469_651504_-	pfam03864, Phage_cap_E, Phage major capsid protein E	NA|123aa|up_5|NZ_CP024885.1_651525_651894_-	NA	NA|74aa|up_4|NZ_CP024885.1_651890_652112_-	NA	NA|106aa|up_3|NZ_CP024885.1_652779_653097_-	NA	NA|74aa|up_2|NZ_CP024885.1_653093_653315_-	NA	NA|80aa|up_1|NZ_CP024885.1_653314_653554_-	NA	NA|277aa|up_0|NZ_CP024885.1_654000_654831_-	PRK10819, PRK10819, transport protein TonB; Provisional	NA|206aa|down_0|NZ_CP024885.1_657112_657730_+	cd01192, INT_C_like_3, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain	NA|149aa|down_1|NZ_CP024885.1_657774_658221_-	NA	NA|143aa|down_2|NZ_CP024885.1_658281_658710_-	NA	NA|242aa|down_3|NZ_CP024885.1_658835_659561_-	pfam01844, HNH, HNH endonuclease	NA|240aa|down_4|NZ_CP024885.1_660249_660969_-	PRK10871, nlpD, murein hydrolase activator NlpD	NA|305aa|down_5|NZ_CP024885.1_661056_661971_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|498aa|down_6|NZ_CP024885.1_662182_663676_+	pfam01977, UbiD, 3-octaprenyl-4-hydroxybenzoate carboxy-lyase	NA|193aa|down_7|NZ_CP024885.1_663687_664266_+	COG0163, UbiX family flavin prenyltransferase [Coenzyme transport and metabolism]	NA|239aa|down_8|NZ_CP024885.1_664278_664995_+	pfam04474, DUF554, Protein of unknown function (DUF554)	NA|185aa|down_9|NZ_CP024885.1_665048_665603_+	PRK03759, PRK03759, isopentenyl-diphosphate Delta-isomerase
GCF_002796525.1_ASM279652v1	NZ_CP024885	Klebsiella aerogenes strain AR_0009 chromosome, complete genome	2	681526-681640	2	CRISPRCasFinder	no		cas3,csa3,DEDDh,WYL,DinG	Orphan	GTTGGGTAGCCCGGATAAGGCGTAACCGC	29	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,WYL,DinG	NA|120aa|up_3|NZ_CP024885.1_677976_678336_+,NA	NA|89aa|up_9|NZ_CP024885.1_672812_673079_-	PRK10878, PRK10878, FAD assembly factor SdhE	NA|328aa|up_8|NZ_CP024885.1_673302_674286_+	PRK09559, PRK09559, putative global regulator; Reviewed	NA|220aa|up_7|NZ_CP024885.1_674384_675044_-	PRK15087, PRK15087, hemolysin; Provisional	NA|104aa|up_6|NZ_CP024885.1_675208_675520_-	PRK04980, PRK04980, hypothetical protein; Provisional	NA|243aa|up_5|NZ_CP024885.1_675570_676299_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|478aa|up_4|NZ_CP024885.1_676418_677852_+	PRK15014, PRK15014, 6-phospho-beta-glucosidase BglA; Provisional	NA|120aa|up_3|NZ_CP024885.1_677976_678336_+	NA	NA|670aa|up_2|NZ_CP024885.1_678385_680395_+	COG4232, COG4232, Thiol:disulfide interchange protein [Posttranslational modification, protein turnover, chaperones / Energy production and conversion]	NA|204aa|up_1|NZ_CP024885.1_680396_681008_+	cd03023, DsbA_Com1_like, DsbA family, Com1-like subfamily; composed of proteins similar to Com1, a 27-kDa outer membrane-associated immunoreactive protein originally found in both acute and chronic disease strains of the pathogenic bacteria Coxiella burnetti	NA|168aa|up_0|NZ_CP024885.1_680997_681501_+	cd03011, TlpA_like_ScsD_MtbDsbE, TlpA-like family, suppressor for copper sensitivity D protein (ScsD) and actinobacterial DsbE homolog subfamily; composed of ScsD, the DsbE homolog of Mycobacterium tuberculosis (MtbDsbE) and similar proteins, all containing a redox-active CXXC motif	NA|248aa|down_0|NZ_CP024885.1_681696_682440_-	PRK09730, PRK09730, SDR family oxidoreductase	NA|958aa|down_1|NZ_CP024885.1_682500_685374_-	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase	NA|130aa|down_2|NZ_CP024885.1_685504_685894_-	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|365aa|down_3|NZ_CP024885.1_685918_687013_-	PRK00389, gcvT, glycine cleavage system aminomethyltransferase GcvT	NA|401aa|down_4|NZ_CP024885.1_687435_688638_-	PRK08013, PRK08013, oxidoreductase; Provisional	NA|393aa|down_5|NZ_CP024885.1_688648_689827_-	PRK05732, PRK05732, 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated	NA|439aa|down_6|NZ_CP024885.1_689823_691140_-	PRK10879, PRK10879, proline aminopeptidase P II; Provisional	NA|193aa|down_7|NZ_CP024885.1_691165_691744_-	PRK01736, PRK01736, hypothetical protein; Reviewed	NA|110aa|down_8|NZ_CP024885.1_691910_692240_+	PRK10972, PRK10972, cell division protein ZapA	NA|199aa|down_9|NZ_CP024885.1_692564_693161_+	PRK10333, PRK10333, 5-formyltetrahydrofolate cyclo-ligase family protein; Provisional
GCF_002796525.1_ASM279652v1	NZ_CP024885	Klebsiella aerogenes strain AR_0009 chromosome, complete genome	3	883746-883884	3	CRISPRCasFinder	no		cas3,csa3,DEDDh,WYL,DinG	Orphan	TAAGGCGAAGCCGCTACCCGCATCCTGTTACCCGGCGGCGCTGCGC	46	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,WYL,DinG	NA,NA|353aa|down_3|NZ_CP024885.1_890798_891857_+	NA|366aa|up_9|NZ_CP024885.1_872317_873415_-	PRK09423, gldA, glycerol dehydrogenase; Provisional	NA|357aa|up_8|NZ_CP024885.1_873971_875042_+	PRK11468, PRK11468, dihydroxyacetone kinase subunit DhaK; Provisional	NA|211aa|up_7|NZ_CP024885.1_875052_875685_+	PRK10005, PRK10005, dihydroxyacetone kinase ADP-binding subunit DhaL	NA|473aa|up_6|NZ_CP024885.1_875695_877114_+	PRK11377, PRK11377, dihydroxyacetone kinase subunit M; Provisional	NA|550aa|up_5|NZ_CP024885.1_877188_878838_+	TIGR02361, Dihydroxyacetone_kinase_1, dihydroxyacetone kinase, ATP-dependent	NA|258aa|up_4|NZ_CP024885.1_878941_879715_-	COG2375, ViuB, Siderophore-interacting protein [Inorganic ion transport and metabolism]	NA|173aa|up_3|NZ_CP024885.1_879943_880462_+	COG1695, COG1695, Predicted transcriptional regulators [Transcription]	NA|460aa|up_2|NZ_CP024885.1_880725_882105_+	PRK11522, PRK11522, putrescine--2-oxoglutarate aminotransferase; Provisional	NA|111aa|up_1|NZ_CP024885.1_882147_882480_-	PRK10089, PRK10089, chaperone CsaA	NA|328aa|up_0|NZ_CP024885.1_882687_883671_+	PRK10339, PRK10339, DNA-binding transcriptional repressor EbgR; Provisional	NA|150aa|down_0|NZ_CP024885.1_887144_887594_+	PRK10202, ebgC, beta-galactosidase subunit beta	NA|478aa|down_1|NZ_CP024885.1_887688_889122_+	PRK15238, PRK15238, inner membrane transporter YjeM; Provisional	NA|478aa|down_2|NZ_CP024885.1_889351_890785_+	PRK15238, PRK15238, inner membrane transporter YjeM; Provisional	NA|353aa|down_3|NZ_CP024885.1_890798_891857_+	NA	NA|784aa|down_4|NZ_CP024885.1_891874_894226_+	PRK10137, PRK10137, alpha-glucosidase; Provisional	NA|99aa|down_5|NZ_CP024885.1_894266_894563_-	PRK10486, PRK10486, (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase	NA|296aa|down_6|NZ_CP024885.1_894559_895447_-	PRK08227, PRK08227, 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase	NA|334aa|down_7|NZ_CP024885.1_895458_896460_-	PRK15408, PRK15408, autoinducer 2 ABC transporter substrate-binding protein LsrB	NA|333aa|down_8|NZ_CP024885.1_896461_897460_-	PRK15038, PRK15038, autoinducer 2 ABC transporter permease LsrD	NA|345aa|down_9|NZ_CP024885.1_897460_898495_-	PRK15432, PRK15432, autoinducer 2 ABC transporter permease LsrC; Provisional
GCF_002796525.1_ASM279652v1	NZ_CP024885	Klebsiella aerogenes strain AR_0009 chromosome, complete genome	4	3179219-3179333	4	CRISPRCasFinder	no		cas3,csa3,DEDDh,WYL,DinG	Orphan	CTACGCCTGGCAGGGCTACAGGTTTGAGCGGTT	33	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,WYL,DinG	NA,NA	NA|272aa|up_9|NZ_CP024885.1_3166279_3167095_-	TIGR00099, Uncharacterized_protein_MCAP_0867, Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily	NA|811aa|up_8|NZ_CP024885.1_3167245_3169678_-	TIGR01774, Putative_formate_acetyltransferase_3, glycyl radical enzyme, PFL2/glycerol dehydratase family	NA|300aa|up_7|NZ_CP024885.1_3169681_3170581_-	TIGR02494, PFLE_PFLC, glycyl-radical enzyme activating protein	NA|252aa|up_6|NZ_CP024885.1_3170736_3171492_-	PRK05690, PRK05690, molybdopterin biosynthesis protein MoeB; Provisional	NA|412aa|up_5|NZ_CP024885.1_3171491_3172727_-	PRK10680, PRK10680, molybdopterin biosynthesis protein MoeA; Provisional	NA|314aa|up_4|NZ_CP024885.1_3172906_3173848_+	PRK10226, PRK10226, isoaspartyl peptidase; Provisional	NA|618aa|up_3|NZ_CP024885.1_3173862_3175716_+	PRK10261, PRK10261, glutathione transporter ATP-binding protein; Provisional	NA|514aa|up_2|NZ_CP024885.1_3175749_3177291_+	PRK15413, PRK15413, glutathione ABC transporter substrate-binding protein GsiB; Provisional	NA|307aa|up_1|NZ_CP024885.1_3177337_3178258_+	PRK15081, PRK15081, glutathione ABC transporter permease GsiC; Provisional	NA|304aa|up_0|NZ_CP024885.1_3178259_3179171_+	PRK15082, PRK15082, glutathione ABC transporter permease GsiD; Provisional	NA|442aa|down_0|NZ_CP024885.1_3179376_3180702_-	PRK14862, rimO, 30S ribosomal protein S12 methylthiotransferase RimO	NA|128aa|down_1|NZ_CP024885.1_3180959_3181343_+	PRK12302, bssR, biofilm formation regulator BssR	NA|368aa|down_2|NZ_CP024885.1_3181447_3182551_+	pfam07995, GSDH, Glucose / Sorbosone dehydrogenase	NA|209aa|down_3|NZ_CP024885.1_3182556_3183183_-	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|401aa|down_4|NZ_CP024885.1_3183439_3184642_+	PRK10001, PRK10001, serine-type D-Ala-D-Ala carboxypeptidase	NA|253aa|down_5|NZ_CP024885.1_3184670_3185429_-	PRK10681, PRK10681, DNA-binding transcriptional repressor DeoR; Provisional	NA|198aa|down_6|NZ_CP024885.1_3185515_3186109_-	PRK11837, PRK11837, undecaprenyl pyrophosphate phosphatase; Provisional	NA|411aa|down_7|NZ_CP024885.1_3186412_3187645_+	PRK15402, PRK15402, MdfA family multidrug efflux MFS transporter	NA|271aa|down_8|NZ_CP024885.1_3187686_3188499_-	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|401aa|down_9|NZ_CP024885.1_3188498_3189701_-	cd17393, MFS_MosC_like, Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of transporters
