assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002803885.1_ASM280388v1	NZ_CP024998	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	1	234111-234192	1	CRISPRCasFinder	no	cas3	cas3,DEDDh,DinG,csa3,WYL	Unclear	TGAAATTCTACAGACAATGCAAGTTGG	27	1	9	234138-234165|234138-234165|234138-234165|234138-234165|234138-234165|234138-234165|234138-234165|234138-234165|234138-234165	NZ_CP024998.1_224648-224675|NZ_CP024998.1_265602-265575|NZ_CP024998.1_387675-387648|NZ_CP024998.1_1102529-1102502|NZ_CP024998.1_1102584-1102557|NZ_CP024998.1_2171467-2171440|NZ_CP024998.1_1475971-1475944|NZ_CP024998.1_1476142-1476115|NZ_CP024998.1_2530984-2531011	NA	1	1	Unclear	cas3,DEDDh,DinG,csa3,WYL	NA,NA	NA|505aa|up_9|NZ_CP024998.1_221020_222535_+	cd13610, PBP2_ChoS, Substrate-binding domain ChoS of an osmoregulated ABC-type transporter and related proteins; type 2 periplasmic-binding protein fold	NA|353aa|up_8|NZ_CP024998.1_222774_223833_+	PRK03158, PRK03158, histidinol-phosphate aminotransferase; Provisional	NA|181aa|up_7|NZ_CP024998.1_223990_224533_+	COG4502, COG4502, 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]	NA|306aa|up_6|NZ_CP024998.1_225083_226001_-	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]	NA|502aa|up_5|NZ_CP024998.1_226282_227788_-	COG3104, PTR2, Dipeptide/tripeptide permease [Amino acid transport and metabolism]	NA|167aa|up_4|NZ_CP024998.1_228128_228629_-	COG0780, COG0780, Enzyme related to GTP cyclohydrolase I [General function prediction only]	NA|289aa|up_3|NZ_CP024998.1_228648_229515_-	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|133aa|up_2|NZ_CP024998.1_230315_230714_+	COG1780, NrdI, Protein involved in ribonucleotide reduction [Nucleotide transport and metabolism]	NA|702aa|up_1|NZ_CP024998.1_230676_232782_+	PRK07632, PRK07632, ribonucleotide-diphosphate reductase subunit alpha; Validated	NA|324aa|up_0|NZ_CP024998.1_232899_233871_+	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit	NA|324aa|down_0|NZ_CP024998.1_234544_235516_+	COG4606, CeuB, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism]	NA|319aa|down_1|NZ_CP024998.1_235502_236459_+	COG4605, CeuC, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism]	NA|254aa|down_2|NZ_CP024998.1_236455_237217_+	COG4604, CeuD, ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]	NA|343aa|down_3|NZ_CP024998.1_237335_238364_+	COG4607, CeuA, ABC-type enterochelin transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|105aa|down_4|NZ_CP024998.1_238624_238939_-	COG4357, COG4357, Zinc finger domain containing protein (CHY type) [Function unknown]	NA|308aa|down_5|NZ_CP024998.1_238956_239880_-	PRK13906, murB, UDP-N-acetylmuramate dehydrogenase	NA|173aa|down_6|NZ_CP024998.1_240006_240525_-	pfam04229, GrpB, GrpB protein	NA|293aa|down_7|NZ_CP024998.1_240644_241523_+	NF033194, lipo_EMYY, EMYY motif lipoprotein	NA|107aa|down_8|NZ_CP024998.1_241676_241997_+	pfam11009, DUF2847, Protein of unknown function (DUF2847)	NA|375aa|down_9|NZ_CP024998.1_242421_243546_+	COG1929, COG1929, Glycerate kinase [Carbohydrate transport and metabolism]
GCF_002803885.1_ASM280388v1	NZ_CP024998	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	2	453304-453394	2	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	ATAATGTGCAAGTTGGGGTGTGGGCCCCAACA	32	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|201aa|up_7|NZ_CP024998.1_447627_448230_+,NA|26aa|up_6|NZ_CP024998.1_448529_448607_+,NA|97aa|up_1|NZ_CP024998.1_452585_452876_-,NA|44aa|down_2|NZ_CP024998.1_455502_455634_-,NA|26aa|down_6|NZ_CP024998.1_457768_457846_+	NA|329aa|up_9|NZ_CP024998.1_446251_447238_-	TIGR00545, Probable_lipoate-protein_ligase_A, lipoyltransferase and lipoate-protein ligase	NA|59aa|up_8|NZ_CP024998.1_447436_447613_+	COG4873, COG4873, Uncharacterized protein conserved in bacteria [Function unknown]	NA|201aa|up_7|NZ_CP024998.1_447627_448230_+	NA	NA|26aa|up_6|NZ_CP024998.1_448529_448607_+	NA	NA|95aa|up_5|NZ_CP024998.1_449244_449529_+	pfam09683, Lactococcin_972, Bacteriocin (Lactococcin_972)	NA|655aa|up_4|NZ_CP024998.1_449572_451537_+	COG4652, COG4652, Uncharacterized protein conserved in bacteria [Function unknown]	NA|107aa|up_3|NZ_CP024998.1_451539_451860_+	COG5294, COG5294, Uncharacterized protein conserved in bacteria [Function unknown]	NA|214aa|up_2|NZ_CP024998.1_451856_452498_+	TIGR03608, L_ocin_972_ABC, putative bacteriocin export ABC transporter, lactococcin 972 group	NA|97aa|up_1|NZ_CP024998.1_452585_452876_-	NA	NA|46aa|up_0|NZ_CP024998.1_453016_453154_+	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|119aa|down_0|NZ_CP024998.1_453653_454010_-	COG2259, COG2259, Predicted membrane protein [Function unknown]	NA|320aa|down_1|NZ_CP024998.1_454497_455457_+	COG4594, FecB, ABC-type Fe3+-citrate transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|44aa|down_2|NZ_CP024998.1_455502_455634_-	NA	NA|97aa|down_3|NZ_CP024998.1_455697_455988_-	COG2314, XynA, Predicted membrane protein [Function unknown]	NA|184aa|down_4|NZ_CP024998.1_456077_456629_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|313aa|down_5|NZ_CP024998.1_456679_457618_-	PRK06080, PRK06080, 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Validated	NA|26aa|down_6|NZ_CP024998.1_457768_457846_+	NA	NA|404aa|down_7|NZ_CP024998.1_457949_459161_+	TIGR00543, Salicylate_biosynthesis_isochorismate_synthase, isochorismate synthases	NA|558aa|down_8|NZ_CP024998.1_459147_460821_+	COG1165, MenD, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [Coenzyme metabolism]	NA|268aa|down_9|NZ_CP024998.1_460807_461611_+	TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
GCF_002803885.1_ASM280388v1	NZ_CP024998	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	3	1226264-1226347	3	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	TTCTACAGACAATGCAAGTTGGGGTGGG	28	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA,NA|38aa|down_2|NZ_CP024998.1_1228478_1228592_-	NA|454aa|up_9|NZ_CP024998.1_1211108_1212470_+	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism]	NA|586aa|up_8|NZ_CP024998.1_1212817_1214575_-	PRK06354, PRK06354, pyruvate kinase; Provisional	NA|323aa|up_7|NZ_CP024998.1_1214596_1215565_-	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase	NA|315aa|up_6|NZ_CP024998.1_1215833_1216778_-	PRK05724, PRK05724, acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated	NA|286aa|up_5|NZ_CP024998.1_1216777_1217635_-	PRK05654, PRK05654, acetyl-CoA carboxylase carboxyltransferase subunit beta	NA|410aa|up_4|NZ_CP024998.1_1217829_1219059_-	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed	NA|1066aa|up_3|NZ_CP024998.1_1219508_1222706_-	COG0587, DnaE, DNA polymerase III, alpha subunit [DNA replication, recombination, and repair]	NA|314aa|up_2|NZ_CP024998.1_1222726_1223668_-	COG0618, COG0618, Exopolyphosphatase-related proteins [General function prediction only]	NA|433aa|up_1|NZ_CP024998.1_1224119_1225418_-	COG4109, COG4109, Predicted transcriptional regulator containing CBS domains [Transcription]	NA|138aa|up_0|NZ_CP024998.1_1225622_1226036_+	pfam00582, Usp, Universal stress protein family	NA|230aa|down_0|NZ_CP024998.1_1226480_1227170_-	PRK00685, PRK00685, metal-dependent hydrolase; Provisional	NA|352aa|down_1|NZ_CP024998.1_1227344_1228400_+	COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism]	NA|38aa|down_2|NZ_CP024998.1_1228478_1228592_-	NA	NA|373aa|down_3|NZ_CP024998.1_1228715_1229834_-	cd05305, L-AlaDH, Alanine dehydrogenase NAD-binding and catalytic domains	NA|167aa|down_4|NZ_CP024998.1_1229974_1230475_+	pfam00582, Usp, Universal stress protein family	NA|401aa|down_5|NZ_CP024998.1_1230720_1231923_-	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed	NA|316aa|down_6|NZ_CP024998.1_1232010_1232958_-	COG0827, COG0827, Adenine-specific DNA methylase [DNA replication, recombination, and repair]	NA|165aa|down_7|NZ_CP024998.1_1233080_1233575_-	PRK00522, tpx, thiol peroxidase	NA|257aa|down_8|NZ_CP024998.1_1233672_1234443_-	PRK10621, PRK10621, hypothetical protein; Provisional	NA|408aa|down_9|NZ_CP024998.1_1234486_1235710_-	PRK01565, PRK01565, thiamine biosynthesis protein ThiI; Provisional
GCF_002803885.1_ASM280388v1	NZ_CP024998	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	4	1487118-1487206	4	CRISPRCasFinder	no	DEDDh	cas3,DEDDh,DinG,csa3,WYL	Unclear	CAATCCAATTTCTCTATGTTGGGGCCCCACC	31	1	7	1487149-1487175|1487149-1487175|1487149-1487175|1487149-1487175|1487149-1487175|1487149-1487175|1487149-1487175	NZ_CP024998.1_1434713-1434687|NZ_CP024998.1_1102585-1102611|NZ_CP024998.1_1476201-1476227|NZ_CP024998.1_1476259-1476285|NZ_CP024998.1_2428525-2428551|NZ_CP024998.1_2609974-2609948|NZ_CP024998.1_2610030-2610004	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|37aa|up_9|NZ_CP024998.1_1478530_1478641_-,NA|31aa|up_5|NZ_CP024998.1_1481648_1481741_-,NA	NA|37aa|up_9|NZ_CP024998.1_1478530_1478641_-	NA	NA|244aa|up_8|NZ_CP024998.1_1478728_1479460_-	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only]	NA|438aa|up_7|NZ_CP024998.1_1479461_1480775_-	COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane]	NA|167aa|up_6|NZ_CP024998.1_1481066_1481567_+	COG1528, Ftn, Ferritin-like protein [Inorganic ion transport and metabolism]	NA|31aa|up_5|NZ_CP024998.1_1481648_1481741_-	NA	DEDDh|185aa|up_4|NZ_CP024998.1_1481957_1482512_+	cd06130, DNA_pol_III_epsilon_like, an uncharacterized bacterial subgroup of the DEDDh 3'-5' exonuclease domain family with similarity to the epsilon subunit of DNA polymerase III	NA|357aa|up_3|NZ_CP024998.1_1482578_1483649_-	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|177aa|up_2|NZ_CP024998.1_1483895_1484426_-	pfam11667, DUF3267, Putative zincin peptidase	NA|454aa|up_1|NZ_CP024998.1_1484595_1485957_-	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]	NA|316aa|up_0|NZ_CP024998.1_1486037_1486985_-	PRK13337, PRK13337, putative lipid kinase; Reviewed	NA|476aa|down_0|NZ_CP024998.1_1487643_1489071_-	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA|486aa|down_1|NZ_CP024998.1_1489083_1490541_-	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA|101aa|down_2|NZ_CP024998.1_1490542_1490845_-	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA|513aa|down_3|NZ_CP024998.1_1491211_1492750_+	TIGR02121, Osmoregulated_proline_transporter, sodium/proline symporter	NA|400aa|down_4|NZ_CP024998.1_1493289_1494489_-	COG4851, CamS, Protein involved in sex pheromone biosynthesis [General function prediction only]	NA|668aa|down_5|NZ_CP024998.1_1494501_1496505_-	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated	NA|731aa|down_6|NZ_CP024998.1_1496508_1498701_-	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA	NA|231aa|down_7|NZ_CP024998.1_1498697_1499390_-	COG1646, COG1646, Predicted phosphate-binding enzymes, TIM-barrel fold [General function prediction only]	NA|101aa|down_8|NZ_CP024998.1_1499561_1499864_-	COG4496, COG4496, Uncharacterized protein conserved in bacteria [Function unknown]	NA|432aa|down_9|NZ_CP024998.1_1499971_1501267_-	cd01360, Adenylsuccinate_lyase_1, Adenylsuccinate lyase (ASL)_subgroup 1
GCF_002803885.1_ASM280388v1	NZ_CP024998	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	5	1665323-1665418	5	CRISPRCasFinder	no	csa3	cas3,DEDDh,DinG,csa3,WYL	Type I-A	CAACTTTAGTTGTTAGGGGCTCTTATGCAG	30	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|77aa|up_5|NZ_CP024998.1_1659998_1660229_-,NA|364aa|up_0|NZ_CP024998.1_1664215_1665307_+,NA|31aa|down_0|NZ_CP024998.1_1665514_1665607_+	NA|237aa|up_9|NZ_CP024998.1_1655624_1656335_+	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase	NA|148aa|up_8|NZ_CP024998.1_1656454_1656898_-	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]	NA|138aa|up_7|NZ_CP024998.1_1657097_1657511_-	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function    prediction only]	NA|458aa|up_6|NZ_CP024998.1_1657952_1659326_-	pfam01878, EVE, EVE domain	NA|77aa|up_5|NZ_CP024998.1_1659998_1660229_-	NA	NA|313aa|up_4|NZ_CP024998.1_1660259_1661198_-	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism]	NA|222aa|up_3|NZ_CP024998.1_1661634_1662300_-	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	csa3|107aa|up_2|NZ_CP024998.1_1662451_1662772_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|327aa|up_1|NZ_CP024998.1_1662773_1663754_+	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|364aa|up_0|NZ_CP024998.1_1664215_1665307_+	NA	NA|31aa|down_0|NZ_CP024998.1_1665514_1665607_+	NA	NA|286aa|down_1|NZ_CP024998.1_1665754_1666612_-	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|261aa|down_2|NZ_CP024998.1_1666679_1667462_-	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|602aa|down_3|NZ_CP024998.1_1667692_1669498_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|513aa|down_4|NZ_CP024998.1_1670178_1671717_+	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism]	NA|711aa|down_5|NZ_CP024998.1_1671751_1673884_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|145aa|down_6|NZ_CP024998.1_1673895_1674330_+	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]	NA|369aa|down_7|NZ_CP024998.1_1674329_1675436_+	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional	NA|2446aa|down_8|NZ_CP024998.1_1675754_1683092_-	TIGR04263, cell_wall_surface_anchor_family_protein, SasC/Mrp/FmtB intercellular aggregation domain	NA|452aa|down_9|NZ_CP024998.1_1683368_1684724_-	PRK14316, glmM, phosphoglucosamine mutase; Provisional
GCF_002803885.1_ASM280388v1	NZ_CP024998	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	6	1925681-1925763	6	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	GGGCCCCAACACAGAAGCTGGCGGCAG	27	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA,NA|61aa|down_1|NZ_CP024998.1_1926884_1927067_-	NA|151aa|up_9|NZ_CP024998.1_1912879_1913332_-	pfam01590, GAF, GAF domain	NA|226aa|up_8|NZ_CP024998.1_1913351_1914029_-	pfam02665, Nitrate_red_gam, Nitrate reductase gamma subunit	NA|197aa|up_7|NZ_CP024998.1_1914021_1914612_-	COG2180, NarJ, Nitrate reductase delta subunit [Energy production and conversion]	NA|520aa|up_6|NZ_CP024998.1_1914589_1916149_-	COG1140, NarY, Nitrate reductase beta subunit [Energy production and conversion]	NA|1230aa|up_5|NZ_CP024998.1_1916138_1919828_-	COG5013, NarG, Nitrate reductase alpha subunit [Energy production and conversion]	NA|326aa|up_4|NZ_CP024998.1_1920137_1921115_-	TIGR01469, Uroporphyrinogen-III_C-methyltransferase, uroporphyrin-III C-methyltransferase	NA|105aa|up_3|NZ_CP024998.1_1921105_1921420_-	cd03530, Rieske_NirD_small_Bacillus, Small subunit of nitrite reductase (NirD) family, Rieske domain; composed of proteins similar to the Bacillus subtilis small subunit of assimilatory nitrite reductase containing a Rieske domain	NA|802aa|up_2|NZ_CP024998.1_1921423_1923829_-	COG1251, NirB, NAD(P)H-nitrite reductase [Energy production and conversion]	NA|256aa|up_1|NZ_CP024998.1_1923856_1924624_-	COG2138, COG2138, Sirohydrochlorin ferrochelatase [Inorganic ion transport and metabolism]	NA|179aa|up_0|NZ_CP024998.1_1924852_1925389_-	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain	NA|275aa|down_0|NZ_CP024998.1_1925857_1926682_-	COG2116, FocA, Formate/nitrite family of transporters [Inorganic ion transport and metabolism]	NA|61aa|down_1|NZ_CP024998.1_1926884_1927067_-	NA	NA|156aa|down_2|NZ_CP024998.1_1927153_1927621_-	COG3832, COG3832, Uncharacterized conserved protein [Function unknown]	NA|516aa|down_3|NZ_CP024998.1_1927806_1929354_-	pfam09223, ZinT, ZinT (YodA) periplasmic lipocalin-like zinc-recruitment	NA|89aa|down_4|NZ_CP024998.1_1929647_1929914_-	pfam06769, YoeB_toxin, YoeB-like toxin of bacterial type II toxin-antitoxin system	NA|84aa|down_5|NZ_CP024998.1_1929913_1930165_-	COG2161, StbD, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|200aa|down_6|NZ_CP024998.1_1930437_1931037_-	COG1651, DsbG, Protein-disulfide isomerase [Posttranslational modification, protein turnover, chaperones]	NA|121aa|down_7|NZ_CP024998.1_1931055_1931418_-	pfam14729, DUF4467, Domain of unknown function with cystatin-like fold (DUF4467)	NA|417aa|down_8|NZ_CP024998.1_1931673_1932924_+	pfam02388, FemAB, FemAB family	NA|244aa|down_9|NZ_CP024998.1_1933018_1933750_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
GCF_002803885.1_ASM280388v1	NZ_CP024998	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	7	2196169-2196420	1	CRT	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	NNACTNANNGATTCTGAT	18	1	1	2196325-2196342	NZ_CP024998.1_1586003-1586020	NA	5	5	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|632aa|up_7|NZ_CP024998.1_2182838_2184734_-,NA|315aa|down_1|NZ_CP024998.1_2204923_2205868_+,NA|95aa|down_2|NZ_CP024998.1_2207662_2207947_+,NA|120aa|down_3|NZ_CP024998.1_2208095_2208455_+	NA|620aa|up_9|NZ_CP024998.1_2179995_2181855_+	PRK08581, PRK08581, amidase domain-containing protein	NA|187aa|up_8|NZ_CP024998.1_2182109_2182670_-	cd00431, cysteine_hydrolases, Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle	NA|632aa|up_7|NZ_CP024998.1_2182838_2184734_-	NA	NA|453aa|up_6|NZ_CP024998.1_2184975_2186334_-	TIGR02919, conserved_hypothetical_protein, accessory Sec system glycosyltransferase GtfB	NA|503aa|up_5|NZ_CP024998.1_2186326_2187835_-	TIGR02918, lipopolysaccharide_biosynthesis_protein, accessory Sec system glycosylation protein GtfA	NA|797aa|up_4|NZ_CP024998.1_2187852_2190243_-	TIGR03714, Protein_translocase_subunit_SecA_2, accessory Sec system translocase SecA2	NA|320aa|up_3|NZ_CP024998.1_2190232_2191192_-	TIGR03711, acc_sec_asp3, accessory Sec system protein Asp3	NA|523aa|up_2|NZ_CP024998.1_2191169_2192738_-	TIGR03712, acc_sec_asp2, accessory Sec system protein Asp2	NA|518aa|up_1|NZ_CP024998.1_2192727_2194281_-	TIGR03713, acc_sec_asp1, accessory Sec system protein Asp1	NA|404aa|up_0|NZ_CP024998.1_2194291_2195503_-	PRK12417, secY, preprotein translocase subunit SecY; Reviewed	NA|231aa|down_0|NZ_CP024998.1_2202859_2203552_-	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only]	NA|315aa|down_1|NZ_CP024998.1_2204923_2205868_+	NA	NA|95aa|down_2|NZ_CP024998.1_2207662_2207947_+	NA	NA|120aa|down_3|NZ_CP024998.1_2208095_2208455_+	NA	NA|204aa|down_4|NZ_CP024998.1_2208539_2209151_-	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only]	NA|159aa|down_5|NZ_CP024998.1_2209229_2209706_-	PRK05528, PRK05528, peptide-methionine (S)-S-oxide reductase	NA|167aa|down_6|NZ_CP024998.1_2209708_2210209_-	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain	NA|256aa|down_7|NZ_CP024998.1_2210583_2211351_-	COG4464, CapC, Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|231aa|down_8|NZ_CP024998.1_2211347_2212040_-	cd05387, BY-kinase, bacterial tyrosine-kinase	NA|221aa|down_9|NZ_CP024998.1_2212056_2212719_-	COG3944, COG3944, Capsular polysaccharide biosynthesis protein [Cell envelope biogenesis, outer membrane]
