bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NZ_CP024998	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	1.1|234138|28|NZ_CP024998|CRISPRCasFinder	NZ_CP024998.1	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	100.00	28	0	0	1	28	224648	224675	234111-234192|453304-453394|1226264-1226347|1487118-1487206|1665323-1665418|1925681-1925763|2196169-2196420	2e-07	46.0	1.0	CGGGGCCCCAACACAGAGAATTTCGAAA	224648-224675	CGGGGCCCCAACACAGAGAATTTCGAAA	0
NZ_CP024998	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	1.1|234138|28|NZ_CP024998|CRISPRCasFinder	NZ_CP024998.1	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	100.00	28	0	0	1	28	265602	265575	234111-234192|453304-453394|1226264-1226347|1487118-1487206|1665323-1665418|1925681-1925763|2196169-2196420	2e-07	46.0	1.0	CGGGGCCCCAACACAGAGAATTTCGAAA	265575-265602	TTTCGAAATTCTCTGTGTTGGGGCCCCG	0
NZ_CP024998	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	1.1|234138|28|NZ_CP024998|CRISPRCasFinder	NZ_CP024998.1	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	100.00	28	0	0	1	28	387675	387648	234111-234192|453304-453394|1226264-1226347|1487118-1487206|1665323-1665418|1925681-1925763|2196169-2196420	2e-07	46.0	1.0	CGGGGCCCCAACACAGAGAATTTCGAAA	387648-387675	TTTCGAAATTCTCTGTGTTGGGGCCCCG	0
NZ_CP024998	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	1.1|234138|28|NZ_CP024998|CRISPRCasFinder	NZ_CP024998.1	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	96.43	28	1	0	1	28	1102529	1102502	234111-234192|453304-453394|1226264-1226347|1487118-1487206|1665323-1665418|1925681-1925763|2196169-2196420	1e-06	42.8	1.0	CGGGGCCCCAACACAGAGAATTTCGAAA	1102502-1102529	TTTTGAAATTCTCTGTGTTGGGGCCCCG	1
NZ_CP024998	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	1.1|234138|28|NZ_CP024998|CRISPRCasFinder	NZ_CP024998.1	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	96.43	28	1	0	1	28	1102584	1102557	234111-234192|453304-453394|1226264-1226347|1487118-1487206|1665323-1665418|1925681-1925763|2196169-2196420	1e-06	42.8	1.0	CGGGGCCCCAACACAGAGAATTTCGAAA	1102557-1102584	TTTTGAAATTCTCTGTGTTGGGGCCCCG	1
NZ_CP024998	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	1.1|234138|28|NZ_CP024998|CRISPRCasFinder	NZ_CP024998.1	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	96.43	28	1	0	1	28	2171467	2171440	234111-234192|453304-453394|1226264-1226347|1487118-1487206|1665323-1665418|1925681-1925763|2196169-2196420	1e-06	42.8	1.0	CGGGGCCCCAACACAGAGAATTTCGAAA	2171440-2171467	TTTCGAAATTCTCTATGTTGGGGCCCCG	1
NZ_CP024998	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	1.1|234138|28|NZ_CP024998|CRISPRCasFinder	NZ_CP024998.1	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	92.86	28	2	0	1	28	1475971	1475944	234111-234192|453304-453394|1226264-1226347|1487118-1487206|1665323-1665418|1925681-1925763|2196169-2196420	1e-05	39.6	1.0	CGGGGCCCCAACACAGAGAATTTCGAAA	1475944-1475971	TTTTGAAATTCTCTATGTTGGGGCCCCG	2
NZ_CP024998	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	1.1|234138|28|NZ_CP024998|CRISPRCasFinder	NZ_CP024998.1	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	92.86	28	2	0	1	28	1476142	1476115	234111-234192|453304-453394|1226264-1226347|1487118-1487206|1665323-1665418|1925681-1925763|2196169-2196420	1e-05	39.6	1.0	CGGGGCCCCAACACAGAGAATTTCGAAA	1476115-1476142	TTTTGAAATTCTCTGTGTTGGGTCCCCG	2
NZ_CP024998	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	1.1|234138|28|NZ_CP024998|CRISPRCasFinder	NZ_CP024998.1	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	92.86	28	2	0	1	28	2530984	2531011	234111-234192|453304-453394|1226264-1226347|1487118-1487206|1665323-1665418|1925681-1925763|2196169-2196420	1e-05	39.6	1.0	CGGGGCCCCAACACAGAGAATTTCGAAA	2530984-2531011	CGGGGCCCCAATACAGAGAAATTCGAAA	2
NZ_CP024998	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	4.1|1487149|27|NZ_CP024998|CRISPRCasFinder	NZ_CP024998.1	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	96.30	27	1	0	1	27	1434713	1434687	234111-234192|453304-453394|1226264-1226347|1487118-1487206|1665323-1665418|1925681-1925763|2196169-2196420	4e-06	41.2	1.0	CCAACTTACATTGCTTGTAGAAATTGG	1434687-1434713	CCAATTTCTACAAACAATGTAAGTTGG	1
NZ_CP024998	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	4.1|1487149|27|NZ_CP024998|CRISPRCasFinder	NZ_CP024998.1	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	92.59	27	2	0	1	27	1102585	1102611	234111-234192|453304-453394|1226264-1226347|1487118-1487206|1665323-1665418|1925681-1925763|2196169-2196420	4e-05	38.0	1.0	CCAACTTACATTGCTTGTAGAAATTGG	1102585-1102611	CCAACTTGCATTGTTTGTAGAAATTGG	2
NZ_CP024998	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	4.1|1487149|27|NZ_CP024998|CRISPRCasFinder	NZ_CP024998.1	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	92.59	27	2	0	1	27	1476201	1476227	234111-234192|453304-453394|1226264-1226347|1487118-1487206|1665323-1665418|1925681-1925763|2196169-2196420	4e-05	38.0	1.0	CCAACTTACATTGCTTGTAGAAATTGG	1476201-1476227	CCAACTTGCATTGCCTGTAGAAATTGG	2
NZ_CP024998	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	4.1|1487149|27|NZ_CP024998|CRISPRCasFinder	NZ_CP024998.1	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	92.59	27	2	0	1	27	1476259	1476285	234111-234192|453304-453394|1226264-1226347|1487118-1487206|1665323-1665418|1925681-1925763|2196169-2196420	4e-05	38.0	1.0	CCAACTTACATTGCTTGTAGAAATTGG	1476259-1476285	CCAACTTGCATTGCCTGTAGAAATTGG	2
NZ_CP024998	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	4.1|1487149|27|NZ_CP024998|CRISPRCasFinder	NZ_CP024998.1	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	92.59	27	2	0	1	27	2428525	2428551	234111-234192|453304-453394|1226264-1226347|1487118-1487206|1665323-1665418|1925681-1925763|2196169-2196420	4e-05	38.0	1.0	CCAACTTACATTGCTTGTAGAAATTGG	2428525-2428551	CCAACTTGCATTGTTTGTAGAAATTGG	2
NZ_CP024998	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	4.1|1487149|27|NZ_CP024998|CRISPRCasFinder	NZ_CP024998.1	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	92.59	27	2	0	1	27	2609974	2609948	234111-234192|453304-453394|1226264-1226347|1487118-1487206|1665323-1665418|1925681-1925763|2196169-2196420	4e-05	38.0	1.0	CCAACTTACATTGCTTGTAGAAATTGG	2609948-2609974	CCAATTTCAACAAGCAATGCAAGTTGG	2
NZ_CP024998	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	4.1|1487149|27|NZ_CP024998|CRISPRCasFinder	NZ_CP024998.1	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	92.59	27	2	0	1	27	2610030	2610004	234111-234192|453304-453394|1226264-1226347|1487118-1487206|1665323-1665418|1925681-1925763|2196169-2196420	4e-05	38.0	1.0	CCAACTTACATTGCTTGTAGAAATTGG	2610004-2610030	CCAATTTCAACAAGCAATGCAAGTTGG	2
NZ_CP024998	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	7.4|2196325|18|NZ_CP024998|CRT	NZ_CP024998.1	Staphylococcus aureus strain 55-99-44 chromosome, complete genome	88.89	18	2	0	1	18	1586003	1586020	234111-234192|453304-453394|1226264-1226347|1487118-1487206|1665323-1665418|1925681-1925763|2196169-2196420	0.77	23.8	1.0	TCACTGATAGAAGTTGAA	1586003-1586020	TCACTGATTGAAGGTGAA	2
