The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP018838	Streptococcus pneumoniae strain 11A chromosome, complete genome	2079194	8839	47398	2079194	tRNA,bacteriocin,protease,transposase	Streptococcus_phage(25.0%)	42	NA	NA
WP_000530080.1|8839_10096_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	96.9	1.0e-233
WP_001808898.1|10304_10424_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000410533.1|10388_10538_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061760599.1|11234_12272_+	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_000651177.1|12328_13126_+	tyrosine-type DNA invertase PsrA	NA	A0A0H4TI16	Erysipelothrix_phage	28.7	1.3e-21
WP_001813510.1|13136_13742_+	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_000029046.1|15259_16723_-	SAM-dependent DNA methyltransferase	NA	NA	NA	NA	NA
WP_000229097.1|16735_19069_-	DEAD/DEAH box helicase family protein	NA	A0A097BY72	Enterococcus_phage	26.5	2.0e-25
WP_001242576.1|19438_19639_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001088694.1|19673_20183_+	DUF2812 domain-containing protein	NA	NA	NA	NA	NA
WP_000255770.1|20346_21381_+	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA	NA
WP_000046031.1|21407_21932_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_000034662.1|22420_24244_+	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	47.2	1.3e-133
WP_000114433.1|24245_24602_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001810236.1|25003_26140_+	molecular chaperone DnaJ	NA	E3T4P7	Cafeteria_roenbergensis_virus	31.3	3.1e-24
WP_000777760.1|26874_27162_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001278300.1|27171_27582_-	HIT family protein	NA	B5LJ12	Mycobacterium_phage	31.6	3.4e-05
WP_000889925.1|27649_28381_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.6	5.3e-25
WP_000653767.1|28377_29427_+	multidrug ABC transporter permease	NA	NA	NA	NA	NA
WP_000132572.1|29594_29924_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000682135.1|30200_30539_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001219120.1|30543_31281_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001017638.1|31294_32635_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_000358817.1|32676_32832_-	quorum-sensing system pheromone BlpC	NA	NA	NA	NA	NA
WP_001069091.1|32888_34250_-|bacteriocin	bacteriocin secretion accessory protein	bacteriocin	NA	NA	NA	NA
WP_001093259.1|36699_36897_+|bacteriocin	bacteriocin-like peptide BlpI	bacteriocin	NA	NA	NA	NA
WP_001093248.1|37363_37633_+|bacteriocin	bacteriocin-like peptide BlpJ	bacteriocin	NA	NA	NA	NA
WP_000379964.1|37701_37932_+|bacteriocin	bacteriocin-like peptide BlpU	bacteriocin	NA	NA	NA	NA
WP_000346298.1|37934_38054_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000727118.1|38350_38515_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000846944.1|38511_38916_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000379879.1|40067_40322_+|bacteriocin	two-peptide bacteriocin subunit BlpM	bacteriocin	NA	NA	NA	NA
WP_001099492.1|40337_40541_+|bacteriocin	two-peptide bacteriocin subunit BlpN	bacteriocin	NA	NA	NA	NA
WP_001809846.1|40784_40934_+|bacteriocin	bacteriocin-like peptide BlpO	bacteriocin	NA	NA	NA	NA
WP_000346296.1|41037_41157_+	hypothetical protein	NA	NA	NA	NA	NA
WP_078139298.1|41927_42362_+	immunity protein	NA	NA	NA	NA	NA
WP_000760521.1|42376_43066_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_000276498.1|43107_43341_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001838554.1|43671_45018_+|transposase	IS1380-like element ISSpn5 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	40.2	2.6e-78
WP_000638370.1|45199_45811_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_000363002.1|45971_46766_+	phosphotransferase family protein	NA	NA	NA	NA	NA
WP_001266083.1|46762_47398_+|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	tRNA	NA	NA	NA	NA
>prophage 2
NZ_CP018838	Streptococcus pneumoniae strain 11A chromosome, complete genome	2079194	349064	410117	2079194	protease,transposase,integrase,tRNA,bacteriocin	Streptococcus_phage(52.38%)	55	352674:352714	405735:405775
WP_001200062.1|349064_350279_+|tRNA	tRNA 4-thiouridine(8) synthase ThiI	tRNA	NA	NA	NA	NA
WP_001076703.1|350413_351238_+	esterase family protein	NA	NA	NA	NA	NA
WP_001108634.1|351250_352417_+	ATP-grasp domain-containing protein	NA	NA	NA	NA	NA
352674:352714	attL	TCAATGAAAATCAAAGAGCAAACTAGGAAGCTAGCCGCAGG	NA	NA	NA	NA
WP_100910876.1|352924_354418_+	SAM-dependent DNA methyltransferase	NA	A0A2H4UVB0	Bodo_saltans_virus	31.5	1.5e-26
WP_001826876.1|354430_354973_+	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_000756129.1|354969_356025_+	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_000260605.1|356084_356321_+	AbrB family transcriptional regulator	NA	NA	NA	NA	NA
WP_000158366.1|356317_356731_+	type II toxin-antitoxin system death-on-curing family toxin	NA	NA	NA	NA	NA
WP_000444456.1|356848_357814_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2H4JAA2	uncultured_Caudovirales_phage	29.6	1.8e-33
WP_061378071.1|357779_358355_+	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_000526341.1|358384_361735_+	DEAD/DEAH box helicase family protein	NA	A0A2H4P9W3	Gordonia_phage	24.8	2.4e-11
WP_054386074.1|362240_362711_-	arginine repressor	NA	NA	NA	NA	NA
WP_001212037.1|362727_365001_-	Xaa-Pro dipeptidyl-peptidase	NA	NA	NA	NA	NA
WP_010963257.1|365320_368449_+	DNA polymerase III subunit alpha	NA	A0A291AWR1	Streptomyces_phage	32.8	9.0e-114
WP_000820852.1|368530_369538_+	ATP-dependent 6-phosphofructokinase	NA	NA	NA	NA	NA
WP_001042809.1|369596_371102_+	pyruvate kinase	NA	NA	NA	NA	NA
WP_001167984.1|371376_371625_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S5S8R9	Streptococcus_phage	52.1	1.7e-12
WP_000536835.1|372174_372429_-	phage repressor protein	NA	B3GVX0	Streptococcus_phage	61.2	3.3e-19
WP_000749605.1|372864_373737_+	DUF4300 family protein	NA	NA	NA	NA	NA
WP_000420566.1|374369_374681_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000759775.1|374684_375401_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_100910877.1|375523_376780_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	96.9	3.8e-233
WP_000617843.1|376952_377768_-	TIGR03943 family protein	NA	NA	NA	NA	NA
WP_000123614.1|377764_378670_-	permease	NA	NA	NA	NA	NA
WP_000268689.1|378670_378802_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000359149.1|379126_381256_+	RNA-binding transcriptional accessory protein	NA	NA	NA	NA	NA
WP_000778587.1|381242_381692_+	SprT family protein	NA	NA	NA	NA	NA
WP_001844074.1|381720_382023_+	PspC domain-containing protein	NA	NA	NA	NA	NA
WP_000680767.1|382376_382568_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000173358.1|382995_383754_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.3	7.7e-27
WP_000489386.1|383755_385744_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_001153880.1|386454_387450_-|transposase	IS30 family transposase	transposase	H7BVY4	unidentified_phage	35.4	1.5e-35
WP_074186901.1|387682_387865_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000661000.1|388156_389632_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_000366713.1|390567_391428_+	polyamine aminopropyltransferase	NA	NA	NA	NA	NA
WP_000088783.1|391424_392684_+	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_000764369.1|392683_393811_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
WP_000969445.1|393807_394893_+	agmatine deiminase	NA	M1HES8	Acanthocystis_turfacea_Chlorella_virus	47.5	1.6e-89
WP_001246753.1|394902_395778_+	N-carbamoylputrescine amidase	NA	M1H5W0	Paramecium_bursaria_Chlorella_virus	50.0	1.9e-77
WP_000593568.1|395958_396768_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_000602449.1|397039_397261_+|bacteriocin	SP_0924 family bacteriocin-like peptide	bacteriocin	NA	NA	NA	NA
WP_000745380.1|397314_397986_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_001025709.1|398227_399136_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	27.7	3.1e-06
WP_000745389.1|399132_399594_+	signal peptidase II	NA	NA	NA	NA	NA
WP_000403193.1|399583_400471_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_000728291.1|400473_402357_+	MBL fold metallo-hydrolase	NA	Q332B9	Clostridium_botulinum_C_phage	22.9	9.5e-10
WP_075218898.1|402436_403567_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	58.4	1.1e-114
WP_000254687.1|403576_404839_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	64.8	5.0e-140
WP_000689700.1|404842_405640_+	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	50.9	1.1e-60
WP_000033389.1|405861_406500_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	68.1	1.7e-75
405735:405775	attR	CCTGCGGCTAGCTTCCTAGTTTGCTCTTTGATTTTCATTGA	NA	NA	NA	NA
WP_000806716.1|406496_407387_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	51.4	1.4e-72
WP_000358228.1|407426_407744_+	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	60.0	2.9e-28
WP_001166872.1|407746_408616_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	75.7	3.8e-115
WP_001261452.1|408842_409361_+	ClbS/DfsB family four-helix bundle protein	NA	NA	NA	NA	NA
WP_000345254.1|409469_410117_+	replication initiator protein A	NA	A0A2P0VK56	Streptococcus_phage	33.7	7.0e-13
>prophage 3
NZ_CP018838	Streptococcus pneumoniae strain 11A chromosome, complete genome	2079194	630599	640195	2079194	transposase	Bacillus_phage(33.33%)	9	NA	NA
WP_050197910.1|630599_633068_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	35.5	4.6e-105
WP_000204727.1|633261_634248_+	L-lactate dehydrogenase	NA	NA	NA	NA	NA
WP_000731137.1|634584_635280_-	potassium channel family protein	NA	A0A1B0Y2S3	Lactobacillus_phage	44.0	5.4e-19
WP_001061866.1|635326_635590_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_000134770.1|635582_635885_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000530078.1|636018_637275_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	96.7	6.6e-233
WP_001289493.1|637337_638147_-	MBL fold metallo-hydrolase	NA	A0A0C5AFC1	Paenibacillus_phage	39.0	1.8e-34
WP_100910888.1|638148_639498_-	cell wall metabolism sensor histidine kinase VicK	NA	W8CYF6	Bacillus_phage	34.0	5.2e-34
WP_000722076.1|639490_640195_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	39.8	2.8e-39
>prophage 4
NZ_CP018838	Streptococcus pneumoniae strain 11A chromosome, complete genome	2079194	718897	747710	2079194	protease,transposase	Streptococcus_phage(88.0%)	35	NA	NA
WP_000420682.1|718897_719212_+	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
WP_000985015.1|719227_719614_+	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
WP_000813488.1|719642_721028_+	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
WP_000879507.1|721030_721183_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001815707.1|721205_722624_+	helix-turn-helix domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	100.0	1.5e-233
WP_001860874.1|722672_722756_+	23S rRNA methyltransferase attenuator leader peptide ErmL	NA	NA	NA	NA	NA
WP_001038795.1|722880_723618_+	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NA	E4ZFQ0	Streptococcus_phage	99.2	3.1e-134
WP_000085862.1|723622_723754_+	hypothetical protein	NA	E4ZFP9	Streptococcus_phage	100.0	7.9e-17
WP_000019067.1|723874_725122_-|transposase	ISL3 family transposase	transposase	Q6V7R1	Burkholderia_virus	23.9	3.9e-12
WP_001009056.1|725301_725523_+	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
WP_000342539.1|725639_726137_+	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
WP_000506270.1|726111_726618_+	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
WP_000331160.1|726601_729049_+	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
WP_100910889.1|729051_731229_+	hypothetical protein	NA	A0A1S5SF30	Streptococcus_phage	99.9	0.0e+00
WP_000769868.1|731225_732227_+	peptidase P60	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	5.0e-191
WP_100910890.1|732223_733111_+	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	93.9	1.4e-157
WP_012386611.1|733385_733472_+	tetracycline resistance determinant leader peptide	NA	NA	NA	NA	NA
WP_000691744.1|733487_735407_+	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	97.3	0.0e+00
WP_011058338.1|735507_735693_+	conjugal transfer protein	NA	D0R0F6	Streptococcus_phage	67.9	3.9e-17
WP_001814874.1|736306_736390_+	23S rRNA methyltransferase attenuation leader peptide	NA	NA	NA	NA	NA
WP_001038790.1|736514_737252_+	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NA	E4ZFQ0	Streptococcus_phage	99.6	1.4e-134
WP_000085855.1|737256_737388_+	hypothetical protein	NA	E4ZFP9	Streptococcus_phage	90.7	8.2e-14
WP_000576156.1|737606_738161_+	recombinase family protein	NA	A0A0F7LA37	Escherichia_phage	52.1	2.3e-36
WP_001240982.1|738164_741083_+|transposase	Tn3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	36.1	1.1e-169
WP_013670292.1|741582_741654_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000804885.1|741882_742305_+	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
WP_000857133.1|742301_742532_+	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
WP_001845478.1|742757_743009_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000814511.1|742992_743196_+	excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
WP_001291561.1|743277_744495_+|transposase	transposase	transposase	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
WP_000821309.1|744709_745297_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_000840776.1|745299_745533_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000566524.1|745545_745926_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000645887.1|745918_746368_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001210966.1|746351_747710_-	DNA (cytosine-5-)-methyltransferase	NA	A0A141E1L1	Streptococcus_phage	56.3	3.9e-130
>prophage 5
NZ_CP018838	Streptococcus pneumoniae strain 11A chromosome, complete genome	2079194	832294	873787	2079194	tRNA,holin,transposase	Streptococcus_phage(23.08%)	47	NA	NA
WP_000245766.1|832294_832744_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_075218957.1|833038_833407_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_000691853.1|833330_833525_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_001812990.1|833721_834045_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_001136122.1|834025_834211_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100910896.1|834514_836077_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	32.8	1.9e-19
WP_100910897.1|836217_836916_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000071672.1|836958_837855_-	EamA family transporter	NA	NA	NA	NA	NA
WP_000872215.1|837863_838799_-	serine hydrolase	NA	NA	NA	NA	NA
WP_001102211.1|838795_839521_-	proteinase	NA	NA	NA	NA	NA
WP_000290657.1|839604_840240_-|holin	1-alkyl-2-acetylglycerophosphocholine esterase	holin	A0A2K9L661	Tupanvirus	28.7	8.7e-08
WP_000972931.1|840241_841069_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_000526284.1|841090_841426_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001272961.1|842667_843279_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.4	4.9e-16
WP_000855753.1|843323_844052_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_000272294.1|844090_845002_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	51.5	5.9e-90
WP_001206968.1|845067_845304_-	DUF4059 family protein	NA	NA	NA	NA	NA
WP_000590970.1|845369_846113_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.5	4.7e-29
WP_001103449.1|846112_846913_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_000889093.1|847070_847427_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	57.3	1.2e-33
WP_001170346.1|847439_847952_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	55.6	1.3e-46
WP_000405832.1|847951_848446_-	GNAT family N-acetyltransferase	NA	M1PSC3	Streptococcus_phage	52.1	1.9e-42
WP_000858730.1|848580_849027_+	DUF1836 domain-containing protein	NA	NA	NA	NA	NA
WP_001097993.1|849023_849671_+	hemolysin III family protein	NA	NA	NA	NA	NA
WP_000689945.1|849691_850273_-	pyridoxal 5'-phosphate synthase glutaminase subunit PdxT	NA	NA	NA	NA	NA
WP_000138517.1|850273_851149_-	pyridoxal 5'-phosphate synthase lyase subunit PdxS	NA	NA	NA	NA	NA
WP_000036789.1|851300_852680_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_000175407.1|852973_853897_+	FAD:protein FMN transferase	NA	NA	NA	NA	NA
WP_000915944.1|853956_854562_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	54.2	5.9e-54
WP_000673678.1|854579_855824_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	52.7	3.8e-55
WP_000371287.1|855919_856177_-	DUF896 family protein	NA	NA	NA	NA	NA
WP_000164771.1|856218_858255_-|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_000038736.1|858466_859384_-|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_000369583.1|859751_860513_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001099675.1|860785_861628_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	40.2	1.7e-51
WP_001852192.1|861741_863133_-	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_001810003.1|863367_863745_-	hypothetical protein	NA	NA	NA	NA	NA
WP_078139260.1|863911_864973_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_000850564.1|864969_866052_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	31.0	4.4e-36
WP_001040724.1|867534_868731_-	elongation factor Tu	NA	A0A076FFS6	Aureococcus_anophage	29.6	7.3e-32
WP_000348122.1|869652_870522_-	aquaporin family protein	NA	NA	NA	NA	NA
WP_000248996.1|870744_871266_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_001810000.1|871237_872329_-	MucBP domain-containing protein	NA	NA	NA	NA	NA
WP_000935663.1|872439_872694_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000284543.1|872687_872930_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000200307.1|873051_873585_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_001809998.1|873571_873787_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 6
NZ_CP018838	Streptococcus pneumoniae strain 11A chromosome, complete genome	2079194	911946	985487	2079194	terminase,head,protease,integrase,tRNA,portal,tail,holin	Streptococcus_phage(86.15%)	88	919441:919473	992522:992554
WP_000390783.1|911946_912696_-|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	tRNA	NA	NA	NA	NA
WP_000689596.1|912749_913109_-	S1 RNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_000339025.1|913110_914511_-	bifunctional Cof-type HAD-IIB family hydrolase/peptidylprolyl isomerase	NA	A0A1V0S9I2	Catovirus	44.6	2.0e-25
WP_000068664.1|914805_915045_-	30S ribosomal protein S18	NA	NA	NA	NA	NA
WP_000609600.1|915076_915547_-	single-stranded DNA-binding protein	NA	A0A286QQM5	Streptococcus_phage	71.2	9.2e-55
WP_001151785.1|915558_915849_-	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_000167151.1|916001_917345_-|tRNA	asparagine--tRNA ligase	tRNA	A0A2P1EMB4	Moumouvirus	31.2	6.3e-56
WP_000565218.1|917363_917729_-	VOC family protein	NA	NA	NA	NA	NA
WP_000777773.1|917721_918909_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_000153791.1|918905_919337_-	hypothetical protein	NA	NA	NA	NA	NA
919441:919473	attL	AATACTCTTCGAAAATCTCTTCAAACCACGTCA	NA	NA	NA	NA
WP_000039617.1|919714_920263_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_000697785.1|920540_921269_-	peroxide stress protein YaaA	NA	A0A1X9I5I0	Streptococcus_phage	39.0	2.0e-40
WP_001856244.1|921347_921527_-	YczI family protein	NA	NA	NA	NA	NA
WP_000822873.1|921678_923274_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000412218.1|923285_923696_-	peptide deformylase	NA	A0A2I7R224	Vibrio_phage	33.1	1.3e-09
WP_001277411.1|923811_924603_-	glutathione-dependent disulfide-bond oxidoreductase	NA	NA	NA	NA	NA
WP_000032467.1|924615_927312_-	cation-translocating P-type ATPase	NA	M1I547	Acanthocystis_turfacea_Chlorella_virus	28.5	3.1e-70
WP_000813916.1|927615_928800_+	CDF family manganese efflux transporter MntE	NA	NA	NA	NA	NA
WP_001279153.1|928942_930814_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	31.1	1.1e-55
WP_001858603.1|930810_932010_-|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	32.6	6.9e-38
WP_000027897.1|932006_932774_-	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA	NA
WP_000762061.1|933039_933888_-	DegV family protein	NA	NA	NA	NA	NA
WP_001808399.1|933889_934276_-	DUF1149 family protein	NA	NA	NA	NA	NA
WP_000521418.1|934337_935690_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_000742290.1|935713_936493_-	YbbR-like domain-containing protein	NA	NA	NA	NA	NA
WP_001011058.1|936479_937337_-	TIGR00159 family protein	NA	NA	NA	NA	NA
WP_000081003.1|937471_938440_+	NAD(P)/FAD-dependent oxidoreductase	NA	Q9JRK7	Streptococcus_phage	100.0	2.8e-66
WP_000350525.1|938692_939649_-	N-acetylmuramoyl-L-alanine amidase family protein	NA	A0A1S5SBM2	Streptococcus_phage	99.4	1.5e-144
WP_001186239.1|939648_939984_-|holin	phage holin	holin	A0A126GGL9	Streptococcus_phage	99.1	3.4e-51
WP_001810279.1|939987_940287_-	hypothetical protein	NA	A0A1S5SC89	Streptococcus_phage	100.0	1.4e-45
WP_000852249.1|940296_940647_-	hypothetical protein	NA	A0A060QMT7	Streptococcus_phage	100.0	4.7e-64
WP_001091119.1|940649_940853_-	hypothetical protein	NA	X2KU40	Streptococcus_phage	100.0	1.1e-25
WP_000068023.1|947394_947745_-	hypothetical protein	NA	A0A141E0R8	Streptococcus_phage	99.1	9.8e-62
WP_000212166.1|947753_951347_-	hypothetical protein	NA	A0A141E0R9	Streptococcus_phage	98.6	0.0e+00
WP_000478007.1|951333_951684_-	hypothetical protein	NA	A0A060QN56	Streptococcus_phage	100.0	2.1e-56
WP_001185631.1|951722_952103_-	hypothetical protein	NA	A0A1S5SF40	Streptococcus_phage	100.0	9.3e-66
WP_000880665.1|952107_952521_-|tail	tail protein	tail	A0A1S5SF61	Streptococcus_phage	99.3	3.3e-72
WP_000608235.1|952523_952892_-	hypothetical protein	NA	A0A1S5SFB8	Streptococcus_phage	100.0	1.2e-65
WP_000015940.1|952888_953404_-	HK97 gp10 family phage protein	NA	A0A141E0I0	Streptococcus_phage	100.0	9.3e-93
WP_001812940.1|953378_953681_-	hypothetical protein	NA	X2KU30	Streptococcus_phage	100.0	2.0e-42
WP_000021218.1|953697_954009_-	hypothetical protein	NA	A0A1S5S8S7	Streptococcus_phage	99.0	7.2e-48
WP_000669348.1|954010_954199_-	hypothetical protein	NA	A0A141DZN7	Streptococcus_phage	100.0	1.4e-27
WP_000863393.1|954208_955234_-	sugar-binding protein	NA	A0A1S5S8Q2	Streptococcus_phage	99.7	7.3e-190
WP_001288018.1|955256_955781_-	DUF4355 domain-containing protein	NA	E8ZDV2	Streptococcus_phage	98.9	1.7e-73
WP_000565273.1|956262_956676_-	HD domain-containing protein	NA	A0A1S5SBR9	Streptococcus_phage	100.0	5.4e-67
WP_000651746.1|956672_956882_-	hypothetical protein	NA	A0A1S5SB88	Streptococcus_phage	100.0	3.3e-33
WP_000356287.1|956883_958467_-|head	head morphogenesis protein	head	A0A1S5SDJ1	Streptococcus_phage	99.2	5.1e-299
WP_000285392.1|958429_959899_-|portal	phage portal protein	portal	A0A1S5SBD1	Streptococcus_phage	99.2	1.5e-276
WP_000084412.1|959910_961209_-|terminase	PBSX family phage terminase large subunit	terminase	A0A141E1F1	Streptococcus_phage	99.3	7.2e-259
WP_000863690.1|961186_961699_-|terminase	terminase small subunit	terminase	A0A060QNR7	Streptococcus_phage	99.4	1.5e-87
WP_001030244.1|962968_963391_-	DUF1492 domain-containing protein	NA	A0A141E1Y4	Streptococcus_phage	100.0	6.3e-71
WP_001268499.1|963508_963826_-	hypothetical protein	NA	A0A1S5SDY8	Streptococcus_phage	98.1	1.4e-51
WP_001041163.1|963887_964415_-	DUF1642 domain-containing protein	NA	A0A1S5SE80	Streptococcus_phage	96.0	2.4e-96
WP_000391853.1|964416_964731_-	hypothetical protein	NA	A0A1S5SDB3	Streptococcus_phage	98.1	1.5e-56
WP_000119453.1|964881_965220_-	hypothetical protein	NA	A0A1S5SDI1	Streptococcus_phage	100.0	5.6e-62
WP_000580029.1|965664_967008_-	hypothetical protein	NA	A0A1S5SAS5	Streptococcus_phage	99.3	7.7e-256
WP_000097191.1|967010_967832_-	hypothetical protein	NA	A0A1S5SDK7	Streptococcus_phage	99.3	6.5e-157
WP_000054337.1|968004_968508_-	hypothetical protein	NA	A0A126GGP3	Streptococcus_phage	98.8	2.9e-91
WP_000885998.1|968527_969304_-	AAA family ATPase	NA	A0A141DZQ7	Streptococcus_phage	100.0	8.7e-143
WP_001044592.1|969303_969621_-	hypothetical protein	NA	X2KPG0	Streptococcus_phage	100.0	2.0e-53
WP_100910900.1|969639_970833_-	type III restriction endonuclease subunit R	NA	X2KU10	Streptococcus_phage	99.7	5.3e-232
WP_000696057.1|970795_971281_-	hypothetical protein	NA	X2KUD4	Streptococcus_phage	98.8	1.4e-87
WP_000422308.1|971280_971640_-	hypothetical protein	NA	A0A1S5SB89	Streptococcus_phage	99.2	2.3e-58
WP_000157805.1|971639_972122_-	siphovirus Gp157 family protein	NA	A0A1S5S7W2	Streptococcus_phage	100.0	1.4e-79
WP_000544342.1|972114_972837_-	HNH endonuclease	NA	A0A141E0V1	Streptococcus_phage	98.8	3.3e-136
WP_000252078.1|972850_973081_-	hypothetical protein	NA	X2KU06	Streptococcus_phage	100.0	2.2e-33
WP_000189400.1|973081_973423_-	hypothetical protein	NA	A0A1S5S7X8	Streptococcus_phage	100.0	1.4e-57
WP_000970850.1|973434_973626_-	hypothetical protein	NA	A0A1S5SDN5	Streptococcus_phage	100.0	2.3e-28
WP_001050924.1|973622_973817_-	hypothetical protein	NA	X2KSX0	Streptococcus_phage	100.0	1.8e-09
WP_000454230.1|973813_974086_-	hypothetical protein	NA	A0A1S5SDW9	Streptococcus_phage	100.0	8.8e-42
WP_000834564.1|974426_974618_+	hypothetical protein	NA	X2KSW6	Streptococcus_phage	98.4	1.5e-27
WP_001826935.1|974571_974778_-	hypothetical protein	NA	A0A141E1R6	Streptococcus_phage	100.0	4.0e-31
WP_001112859.1|974800_974992_-	DNA-binding protein	NA	A0A141DZR9	Streptococcus_phage	100.0	3.0e-28
WP_000142893.1|975056_975296_+	hypothetical protein	NA	A0A141DZS0	Streptococcus_phage	100.0	4.7e-39
WP_001810072.1|975519_975609_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000970295.1|975831_975924_+	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA	NA
WP_000493111.1|976321_976675_+	helix-turn-helix transcriptional regulator	NA	A0A1S5SEQ8	Streptococcus_phage	99.1	7.1e-60
WP_000156313.1|976676_977771_+	hypothetical protein	NA	A0A1S5SFA1	Streptococcus_phage	100.0	3.5e-206
WP_000151192.1|977993_978374_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A1S5SFH2	Streptococcus_phage	99.2	1.1e-66
WP_000266847.1|978515_979643_+|integrase	site-specific integrase	integrase	A0A1S5SEM0	Streptococcus_phage	100.0	4.5e-209
WP_000011306.1|979730_980642_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	99.7	1.5e-154
WP_001231086.1|980638_981616_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	100.0	1.2e-184
WP_000163035.1|981612_982503_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	29.8	6.7e-06
WP_001140412.1|982554_982935_-	RidA family protein	NA	NA	NA	NA	NA
WP_000422599.1|982945_983533_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
WP_024478652.1|983541_984774_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	59.0	1.4e-131
WP_000442260.1|984810_984981_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000162467.1|984980_985487_-	dihydrofolate reductase	NA	A0A1B2IBQ4	Erwinia_phage	37.4	3.0e-19
992522:992554	attR	TGACGTGGTTTGAAGAGATTTTCGAAGAGTATT	NA	NA	NA	NA
>prophage 7
NZ_CP018838	Streptococcus pneumoniae strain 11A chromosome, complete genome	2079194	1237699	1245031	2079194		uncultured_Mediterranean_phage(33.33%)	9	NA	NA
WP_000167830.1|1237699_1238401_+	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	36.5	1.2e-34
WP_077141275.1|1238808_1239783_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	40.5	5.4e-57
WP_001193668.1|1239772_1240729_+	iron chelate uptake ABC transporter family permease subunit	NA	NA	NA	NA	NA
WP_000764303.1|1240725_1241478_+	ATP-binding cassette domain-containing protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	28.1	5.6e-14
WP_000858263.1|1241573_1242539_+	siderophore ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000821640.1|1242763_1243006_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	59.4	1.3e-17
WP_100910914.1|1243005_1243728_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_000105310.1|1243714_1244284_-	segregation/condensation protein B	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	34.9	5.0e-15
WP_000351907.1|1244302_1245031_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	22.3	5.3e-09
>prophage 8
NZ_CP018838	Streptococcus pneumoniae strain 11A chromosome, complete genome	2079194	1593503	1602256	2079194		Streptococcus_phage(33.33%)	9	NA	NA
WP_000510412.1|1593503_1594343_-	energy-coupling factor transporter ATPase	NA	W8CYL7	Bacillus_phage	32.6	1.1e-15
WP_000835713.1|1594327_1595155_-	energy-coupling factor transporter ATPase	NA	G9BWD6	Planktothrix_phage	32.9	2.1e-22
WP_000712132.1|1595151_1595697_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_001844398.1|1595707_1596538_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_000170191.1|1596570_1597854_-	insulinase family protein	NA	A0A1E1EST3	Acanthamoeba_castellanii_mimivirus	30.0	8.4e-18
WP_000424269.1|1597850_1599101_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	42.1	8.6e-92
WP_000455898.1|1599259_1599628_+	hypothetical protein	NA	A0A1X9I5V8	Streptococcus_phage	56.0	4.5e-17
WP_100910936.1|1599630_1600728_+	DNA replication/repair protein RecF	NA	NA	NA	NA	NA
WP_100910937.1|1600777_1602256_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.5	4.9e-94
>prophage 9
NZ_CP018838	Streptococcus pneumoniae strain 11A chromosome, complete genome	2079194	1625244	1633372	2079194	integrase	Streptococcus_phage(71.43%)	13	1619776:1619790	1633438:1633452
1619776:1619790	attL	TCCCTTTTTGTGTTA	NA	NA	NA	NA
WP_000158204.1|1625244_1626105_-	hypothetical protein	NA	A0A1X9I6L2	Streptococcus_phage	74.5	6.5e-123
WP_000492143.1|1626244_1626520_-	hypothetical protein	NA	A0A1X9I5U9	Streptococcus_phage	56.8	5.6e-20
WP_000058847.1|1626512_1626854_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000122653.1|1626834_1627128_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001003747.1|1627124_1627340_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000171245.1|1627341_1627542_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001812970.1|1627538_1627934_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000424667.1|1628442_1629069_-	Rha family transcriptional regulator	NA	R9QNB1	Lactococcus_phage	40.8	6.1e-30
WP_000438800.1|1629158_1629392_-	helix-turn-helix transcriptional regulator	NA	X2KUC2	Streptococcus_phage	43.9	6.4e-09
WP_001107586.1|1629548_1630505_+	helix-turn-helix transcriptional regulator	NA	A0A060QNS7	Streptococcus_phage	41.0	5.5e-14
WP_000131181.1|1630653_1631658_+	hypothetical protein	NA	A0A0S2SXZ1	Bacillus_phage	29.1	1.2e-11
WP_000357940.1|1631657_1632110_+	type II toxin-antitoxin system death-on-curing family toxin	NA	NA	NA	NA	NA
WP_000704684.1|1632205_1633372_+|integrase	site-specific integrase	integrase	A0A1X9I5Y5	Streptococcus_phage	51.5	5.9e-103
1633438:1633452	attR	TCCCTTTTTGTGTTA	NA	NA	NA	NA
>prophage 10
NZ_CP018838	Streptococcus pneumoniae strain 11A chromosome, complete genome	2079194	1675547	1687003	2079194		Synechococcus_phage(33.33%)	8	NA	NA
WP_000668299.1|1675547_1677701_+	peptide cleavage/export ABC transporter	NA	W8CYL7	Bacillus_phage	28.2	4.2e-46
WP_000801603.1|1677713_1679063_+	HlyD family secretion protein	NA	NA	NA	NA	NA
WP_001843991.1|1679190_1679940_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A1D8KNF0	Synechococcus_phage	39.2	1.4e-41
WP_050167432.1|1679941_1680085_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000361164.1|1680141_1683867_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	25.6	3.6e-37
WP_000220632.1|1683959_1685402_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	35.1	5.7e-55
WP_000182575.1|1685438_1686461_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A1D7SE90	Cyanophage	43.9	1.2e-64
WP_000717506.1|1686457_1687003_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.0	7.4e-24
>prophage 11
NZ_CP018838	Streptococcus pneumoniae strain 11A chromosome, complete genome	2079194	1741090	1773005	2079194	tRNA,bacteriocin	Planktothrix_phage(33.33%)	33	NA	NA
WP_100910945.1|1741090_1741375_+|bacteriocin	lactococcin 972 family bacteriocin	bacteriocin	NA	NA	NA	NA
WP_100910946.1|1741429_1743538_+|bacteriocin	bacteriocin-associated integral membrane family protein	bacteriocin	NA	NA	NA	NA
WP_000571330.1|1743534_1744176_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.8	4.3e-23
WP_001038484.1|1744382_1745189_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_001810177.1|1745205_1746402_+	argininosuccinate synthase	NA	NA	NA	NA	NA
WP_001268171.1|1747538_1748402_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_001818085.1|1748867_1751087_+	peptidase domain-containing ABC transporter	NA	W8CYL7	Bacillus_phage	25.9	5.2e-39
WP_001096141.1|1751079_1751547_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000781019.1|1751543_1752896_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_000420335.1|1753043_1753349_+|bacteriocin	SPAR17_0115 family bacteriocin-like peptide	bacteriocin	NA	NA	NA	NA
WP_000424408.1|1753682_1754036_+	hypothetical protein	NA	NA	NA	NA	NA
WP_078158541.1|1754002_1754761_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000989850.1|1754914_1755127_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000513492.1|1755605_1755851_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001810284.1|1756007_1757066_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001810285.1|1757380_1758358_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000424473.1|1758734_1759109_+|bacteriocin	SPH_0224 family bacteriocin-like peptide	bacteriocin	NA	NA	NA	NA
WP_000511666.1|1759115_1759298_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000619777.1|1759316_1760219_+	hypothetical protein	NA	NA	NA	NA	NA
WP_078135349.1|1760241_1760628_+	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_000539710.1|1760594_1761353_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000680086.1|1761831_1762029_+	hypothetical protein	NA	NA	NA	NA	NA
WP_078102794.1|1762425_1762725_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001810010.1|1762709_1762988_+	hypothetical protein	NA	M1Q0Z8	Streptococcus_phage	50.5	1.1e-20
WP_001035351.1|1763273_1765514_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001282967.1|1765914_1767036_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_078140550.1|1767149_1767632_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_000220946.1|1767641_1769555_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
WP_000331980.1|1769933_1771613_-	ribonuclease J	NA	NA	NA	NA	NA
WP_000639577.1|1771614_1771848_-	DNA-dependent RNA polymerase auxiliary subunit epsilon family protein	NA	NA	NA	NA	NA
WP_001844323.1|1772474_1772672_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000977347.1|1772665_1772818_-|bacteriocin	fratricide two-peptide bacteriocin subunit CibB	bacteriocin	NA	NA	NA	NA
WP_000180803.1|1772819_1773005_-|bacteriocin	fratricide two-peptide bacteriocin subunit CibA	bacteriocin	NA	NA	NA	NA
>prophage 12
NZ_CP018838	Streptococcus pneumoniae strain 11A chromosome, complete genome	2079194	1864232	1933498	2079194	tRNA,transposase,protease	Streptococcus_phage(33.33%)	59	NA	NA
WP_000900660.1|1864232_1865492_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_000814073.1|1865504_1867358_+|tRNA	proline--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	26.8	9.7e-07
WP_000943506.1|1867456_1868836_+	glycoside hydrolase family 1 protein	NA	NA	NA	NA	NA
WP_000334247.1|1869027_1870836_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	A7IW18	Paramecium_bursaria_Chlorella_virus	38.7	1.2e-99
WP_000229754.1|1870955_1872005_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_000530078.1|1872183_1873440_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	96.7	6.6e-233
WP_001232833.1|1873527_1877370_-	LPXTG-anchored pullulanase SpuA	NA	NA	NA	NA	NA
WP_001808847.1|1877707_1877800_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001142332.1|1877786_1878200_+	30S ribosomal protein S12	NA	NA	NA	NA	NA
WP_000087873.1|1878219_1878690_+	30S ribosomal protein S7	NA	NA	NA	NA	NA
WP_000090347.1|1879114_1881196_+	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	29.0	1.7e-63
WP_000530078.1|1881288_1882545_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	96.7	6.6e-233
WP_000071430.1|1882722_1887114_+	PolC-type DNA polymerase III	NA	A0A0K2SUJ2	Clostridium_phage	38.5	2.1e-20
WP_000041497.1|1887215_1887479_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA	NA
WP_000913054.1|1887471_1887750_+	type II toxin-antitoxin system YafQ family toxin	NA	NA	NA	NA	NA
WP_000776632.1|1887770_1887923_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000243919.1|1887944_1889186_+	aminopeptidase	NA	NA	NA	NA	NA
WP_000901567.1|1889195_1889426_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_001234893.1|1889648_1890371_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_000991674.1|1890482_1891817_+	aminopeptidase C	NA	NA	NA	NA	NA
WP_000136861.1|1891872_1892784_-	PTS mannose/fructose/sorbose transporter family subunit IID	NA	NA	NA	NA	NA
WP_000022715.1|1892807_1893611_-	PTS mannose/fructose/sorbose transporter subunit IIC	NA	NA	NA	NA	NA
WP_000021975.1|1893638_1894628_-	PTS mannose transporter subunit IIAB	NA	NA	NA	NA	NA
WP_000649163.1|1894861_1895881_-	alcohol dehydrogenase AdhP	NA	A0A2K9L339	Tupanvirus	25.6	7.9e-27
WP_000162352.1|1896219_1897032_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_000359279.1|1897221_1898640_+	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	31.2	5.8e-44
WP_061823262.1|1898744_1899452_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_078158432.1|1899576_1900527_+	dihydropteroate synthase	NA	NA	NA	NA	NA
WP_000658398.1|1900528_1901851_+	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_000380924.1|1901831_1902386_+	GTP cyclohydrolase I FolE	NA	E7DN69	Pneumococcus_phage	43.8	3.7e-39
WP_000372532.1|1902428_1903265_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_000530081.1|1903271_1904528_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	97.1	4.5e-234
WP_000886031.1|1904812_1905130_-	DUF960 domain-containing protein	NA	NA	NA	NA	NA
WP_001044624.1|1905486_1905933_+	50S ribosomal protein L13	NA	NA	NA	NA	NA
WP_000075973.1|1905951_1906344_+	30S ribosomal protein S9	NA	NA	NA	NA	NA
WP_100910976.1|1906690_1906834_-	hypothetical protein	NA	NA	NA	NA	NA
WP_078139270.1|1908287_1909538_+	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_000203063.1|1909759_1910236_-	glutathione peroxidase	NA	NA	NA	NA	NA
WP_075271548.1|1910425_1913662_+	LPXTG-anchored hyaluronate lyase	NA	NA	NA	NA	NA
WP_000167295.1|1914805_1915435_-	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA	NA
WP_000161480.1|1915444_1916446_-	sugar kinase	NA	NA	NA	NA	NA
WP_000684786.1|1916476_1917118_-	RpiB/LacA/LacB family sugar-phosphate isomerase	NA	NA	NA	NA	NA
WP_000185874.1|1917136_1917952_-	gluconate 5-dehydrogenase	NA	NA	NA	NA	NA
WP_000706826.1|1918223_1918658_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_000592943.1|1918669_1919860_+	unsaturated chondroitin disaccharide hydrolase	NA	NA	NA	NA	NA
WP_000178622.1|1919870_1920362_+	PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB	NA	NA	NA	NA	NA
WP_000026610.1|1920376_1921156_+	PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC	NA	NA	NA	NA	NA
WP_000148012.1|1921142_1921961_+	PTS mannose/fructose/sorbose transporter family subunit IID	NA	NA	NA	NA	NA
WP_000381739.1|1921960_1922254_+	preprotein translocase subunit YajC	NA	NA	NA	NA	NA
WP_000657078.1|1922275_1924177_+	alginate lyase family protein	NA	NA	NA	NA	NA
WP_001844476.1|1924170_1925238_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_000838117.1|1925347_1925683_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000711739.1|1925693_1925936_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001082474.1|1925951_1926146_-	helix-turn-helix transcriptional regulator	NA	I3VYZ1	Thermoanaerobacterium_phage	42.6	7.2e-06
WP_000159418.1|1926311_1927262_+	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	NA	NA	NA	NA	NA
WP_000818547.1|1927273_1927591_+	cell division protein FtsL	NA	NA	NA	NA	NA
WP_100910957.1|1927594_1929847_+	PASTA domain-containing protein	NA	NA	NA	NA	NA
WP_100910958.1|1929848_1930829_+	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA	NA
WP_054376650.1|1931392_1933498_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	H6X3M6	Enterobacteria_phage	37.7	1.0e-116
