The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	0	4987	2630073		Bacillus_virus(50.0%)	4	NA	NA
WP_002288364.1|331_2278_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	43.6	2.7e-140
WP_002288363.1|2274_3399_-	DNA replication/repair protein RecF	NA	NA	NA	NA	NA
WP_002295251.1|3385_3628_-	S4 domain-containing protein YaaA	NA	NA	NA	NA	NA
WP_002288361.1|3856_4987_-	DNA polymerase III subunit beta	NA	A0A0A8IL17	Aurantimonas_phage	25.3	1.9e-29
>prophage 2
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	13477	21718	2630073	integrase,transposase	Streptococcus_phage(33.33%)	8	13359:13392	23752:23785
13359:13392	attL	GGTCTATATCGAACAAGGGAAGATTGCGAAAGTC	NA	NA	NA	NA
WP_025478175.1|13477_14641_-|integrase	site-specific integrase	integrase	A0A1S5S7K9	Streptococcus_phage	37.2	1.1e-61
WP_010734571.1|15068_15326_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_086284099.1|15411_16830_+	DNA primase	NA	NA	NA	NA	NA
WP_002376335.1|16991_17327_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_086284098.1|17457_17670_+	helix-turn-helix transcriptional regulator	NA	A0A0F6WBJ9	Vibrio_phage	40.0	7.9e-06
WP_029682094.1|18106_18433_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002376328.1|18691_19405_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002323245.1|20545_21718_-|transposase	IS256-like element IS1542 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	88.8	1.3e-121
23752:23785	attR	GGTCTATATCGAACAAGGGAAGATTGCGAAAGTC	NA	NA	NA	NA
>prophage 3
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	24756	34613	2630073	tRNA	Bacillus_phage(33.33%)	9	NA	NA
WP_002288805.1|24756_25524_+	ParA family protein	NA	Q8JL10	Natrialba_phage	33.6	2.8e-29
WP_100970361.1|25510_26401_+	ParB/RepB/Spo0J family partition protein	NA	I3NLC2	Bifidobacterium_phage	33.5	8.4e-17
WP_002293106.1|26421_26613_+	DUF951 domain-containing protein	NA	NA	NA	NA	NA
WP_002325956.1|26621_27722_+	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_002299780.1|27811_28507_+	DUF1129 domain-containing protein	NA	NA	NA	NA	NA
WP_002295264.1|29010_30495_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.8	5.6e-98
WP_002307286.1|31163_32435_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	53.4	1.5e-88
WP_002295267.1|32728_33937_-	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	27.3	2.7e-26
WP_002295268.1|33923_34613_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	38.1	1.8e-38
>prophage 4
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	41827	46723	2630073	protease	Klebsiella_phage(50.0%)	3	NA	NA
WP_098188859.1|41827_44320_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A0A8J958	Klebsiella_phage	38.3	9.0e-125
WP_002289033.1|44540_45464_+	U32 family peptidase	NA	NA	NA	NA	NA
WP_033582018.1|45481_46723_+	U32 family peptidase	NA	Q6DW11	Phage_TP	32.9	7.3e-43
>prophage 5
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	61063	71835	2630073		Anomala_cuprea_entomopoxvirus(33.33%)	5	NA	NA
WP_002318033.1|61063_61870_-	ATP-binding cassette domain-containing protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	25.1	3.8e-08
WP_002289390.1|61866_62772_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_002324442.1|62789_63758_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002320801.1|64476_68103_+	DNA-directed RNA polymerase subunit beta	NA	A0A1B1ISA9	uncultured_Mediterranean_phage	24.7	1.5e-48
WP_100970363.1|68181_71835_+	DNA-directed RNA polymerase subunit beta'	NA	R4TQM7	Phaeocystis_globosa_virus	24.9	1.4e-62
>prophage 6
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	83643	84774	2630073		Streptococcus_phage(100.0%)	1	NA	NA
WP_098188852.1|83643_84774_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	49.5	1.4e-69
>prophage 7
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	91467	98104	2630073		Staphylococcus_phage(33.33%)	5	NA	NA
WP_098188850.1|91467_92385_+	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	43.3	3.0e-41
WP_098188849.1|92377_93160_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_098188848.1|93833_94730_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_002287495.1|94925_96575_+	DNA mismatch repair protein MutS	NA	F2QAF9	Pyramimonas_orientalis_virus	25.7	4.9e-18
WP_002287494.1|97168_98104_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	35.1	6.1e-26
>prophage 8
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	104895	105759	2630073		Streptococcus_phage(100.0%)	1	NA	NA
WP_002331281.1|104895_105759_+	AraC family transcriptional regulator	NA	D0R0F8	Streptococcus_phage	26.9	4.5e-23
>prophage 9
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	114149	118997	2630073		Brevibacillus_phage(50.0%)	4	NA	NA
WP_002287463.1|114149_115418_+	mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	NA	A0A0K2CP65	Brevibacillus_phage	37.6	1.6e-16
WP_002287461.1|116087_116552_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002287459.1|116535_117165_+	nitroreductase family protein	NA	NA	NA	NA	NA
WP_002326097.1|117518_118997_+	Msr family ABC-F type ribosomal protection protein	NA	A0A1B0RXA0	Streptococcus_phage	41.8	5.8e-87
>prophage 10
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	124227	127035	2630073		Streptococcus_phage(66.67%)	3	NA	NA
WP_002298218.1|124227_125475_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	57.7	9.4e-115
WP_002287451.1|125471_126278_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	40.4	3.0e-45
WP_002287450.1|126507_127035_+	dUTP diphosphatase	NA	J9PV85	Bacillus_phage	55.2	2.1e-44
>prophage 11
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	132143	133556	2630073	tRNA	Catovirus(100.0%)	1	NA	NA
WP_002322772.1|132143_133556_+|tRNA	cysteine--tRNA ligase	tRNA	A0A1V0SAQ2	Catovirus	31.7	2.0e-52
>prophage 12
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	137661	140209	2630073		Streptococcus_phage(50.0%)	2	NA	NA
WP_002287428.1|137661_138930_+	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	37.6	1.8e-65
WP_002287425.1|138922_140209_+	insulinase family protein	NA	A0A2H4UVM3	Bodo_saltans_virus	27.5	3.9e-07
>prophage 13
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	144244	148143	2630073		Bacillus_phage(50.0%)	3	NA	NA
WP_002298208.1|144244_145291_+	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	67.3	2.6e-126
WP_098188842.1|145701_147258_+	ribonuclease Y	NA	NA	NA	NA	NA
WP_002298207.1|147336_148143_-	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	34.1	1.5e-33
>prophage 14
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	153067	158471	2630073		Planktothrix_phage(25.0%)	5	NA	NA
WP_002287343.1|153067_153748_+	metal ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.5	5.5e-16
WP_002287344.1|153720_154545_+	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_002287345.1|154711_155530_+	pur operon repressor	NA	A0A1V0SKE5	Klosneuvirus	27.1	2.1e-06
WP_002298200.1|156032_157406_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A2K9L277	Tupanvirus	35.8	3.4e-33
WP_002287347.1|157499_158471_+	ribose-phosphate diphosphokinase	NA	A0A1V0SHF7	Hokovirus	32.6	4.9e-42
>prophage 15
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	163921	173121	2630073	tRNA	Abalone_herpesvirus(25.0%)	8	NA	NA
WP_002287358.1|163921_164536_+	guanylate kinase	NA	A0A143DIC6	Abalone_herpesvirus	34.6	2.2e-24
WP_002287365.1|164540_164846_+	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_002298190.1|165098_167507_+	primosomal protein N'	NA	NA	NA	NA	NA
WP_002287369.1|167521_168013_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	43.2	7.9e-17
WP_002298189.1|168005_168944_+|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	30.3	1.8e-09
WP_002298188.1|168943_170302_+	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA	NA
WP_002287376.1|170314_171055_+	Stp1/IreP family PP2C-type Ser/Thr phosphatase	NA	NA	NA	NA	NA
WP_002298187.1|171051_173121_+	Stk1 family PASTA domain-containing Ser/Thr kinase	NA	A0A1V0SDC3	Indivirus	30.3	3.5e-21
>prophage 16
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	177263	178829	2630073		Mycobacterium_phage(100.0%)	1	NA	NA
WP_002298183.1|177263_178829_+	hypothetical protein	NA	B5LJD6	Mycobacterium_phage	50.5	2.3e-17
>prophage 17
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	192216	200124	2630073	protease,tRNA	Cafeteria_roenbergensis_virus(25.0%)	6	NA	NA
WP_002317470.1|192216_193662_+|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	E3T4I1	Cafeteria_roenbergensis_virus	24.5	6.8e-08
WP_002287415.1|193661_194207_+	hypoxanthine phosphoribosyltransferase	NA	A0A1V0SEQ1	Hokovirus	25.3	4.1e-06
WP_002287418.1|194296_196408_+|protease	ATP-dependent zinc metalloprotease FtsH	protease	C7U047	Ostreococcus_tauri_virus	50.3	9.1e-110
WP_100970372.1|196624_197512_+	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA	NA
WP_002298173.1|197512_198508_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_002296055.1|198627_200124_+|tRNA	lysine--tRNA ligase	tRNA	A0A2K9KZX5	Tupanvirus	40.9	8.7e-91
>prophage 18
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	208435	209629	2630073		Staphylococcus_phage(100.0%)	1	NA	NA
WP_002289731.1|208435_209629_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	72.0	1.3e-150
>prophage 19
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	212951	229850	2630073	tRNA	Bacillus_phage(50.0%)	10	NA	NA
WP_100970373.1|212951_214664_+	ABC transporter ATP-binding protein	NA	F2Y302	Organic_Lake_phycodnavirus	25.4	1.2e-14
WP_002318388.1|214666_216436_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.1	3.5e-54
WP_098188837.1|216640_217207_-	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	42.8	1.3e-34
WP_002285909.1|217206_218163_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	57.4	3.3e-43
WP_002297384.1|218162_218819_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_002297383.1|219188_221207_+	LysM peptidoglycan-binding domain-containing protein	NA	Q9ZXE4	Bacillus_phage	39.6	5.8e-13
WP_002285916.1|221633_224048_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	72.8	0.0e+00
WP_002324598.1|224395_225949_+	glycosyl hydrolase	NA	NA	NA	NA	NA
WP_100970374.1|226329_228114_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.0	1.0e-45
WP_100970375.1|228128_229850_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.6	9.2e-36
>prophage 20
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	263475	265848	2630073		Streptococcus_phage(50.0%)	2	NA	NA
WP_002285994.1|263475_263817_+	YlbF family regulator	NA	A0A1X9I5Y8	Streptococcus_phage	34.9	1.3e-10
WP_002324612.1|264093_265848_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.7	6.9e-39
>prophage 21
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	287232	288542	2630073		Streptomyces_phage(50.0%)	2	NA	NA
WP_002286201.1|287232_287667_-	HIT family protein	NA	D7NW73	Streptomyces_phage	34.1	1.2e-08
WP_002297572.1|287804_288542_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.7	1.8e-25
>prophage 22
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	299965	304958	2630073	portal	Tupanvirus(50.0%)	5	NA	NA
WP_100970380.1|299965_301549_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	30.9	4.9e-52
WP_080032559.1|302124_302268_-|portal	portal protein	portal	NA	NA	NA	NA
WP_002293649.1|302491_302971_-	universal stress protein	NA	NA	NA	NA	NA
WP_002293648.1|303043_303328_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100970381.1|303671_304958_-	replication-associated recombination protein A	NA	A0A127AWE7	Bacillus_phage	49.8	6.1e-109
>prophage 23
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	308178	310392	2630073		Orpheovirus(100.0%)	1	NA	NA
WP_002289096.1|308178_310392_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A2I2L310	Orpheovirus	35.8	2.3e-10
>prophage 24
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	313707	319916	2630073	tRNA	Orpheovirus(33.33%)	4	NA	NA
WP_100970382.1|313707_315000_+|tRNA	histidine--tRNA ligase	tRNA	A0A2I2L577	Orpheovirus	26.0	2.5e-25
WP_002289105.1|315013_316783_+|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SJ84	Klosneuvirus	25.3	1.1e-12
WP_002293644.1|316891_317767_+	YitT family protein	NA	NA	NA	NA	NA
WP_002303199.1|318032_319916_+	acetyltransferase	NA	B5WZU0	Pseudomonas_phage	29.9	4.5e-28
>prophage 25
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	326205	329400	2630073		Gordonia_phage(100.0%)	1	NA	NA
WP_100970384.1|326205_329400_+	DEAD/DEAH box helicase family protein	NA	A0A2L1IWL4	Gordonia_phage	28.6	3.1e-37
>prophage 26
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	342848	404645	2630073	protease,transposase,tRNA	Bacillus_phage(15.0%)	58	NA	NA
WP_002304784.1|342848_343355_+|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	tRNA	NA	NA	NA	NA
WP_098188820.1|343403_344063_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_002301298.1|344082_346671_+	ATP-dependent RecD-like DNA helicase	NA	A0A218KCE8	Bacillus_phage	29.2	8.6e-62
WP_002289596.1|346773_347001_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002289597.1|347110_347740_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_098188819.1|348934_349867_+	ABC transporter ATP-binding protein	NA	A0A285PWH2	Cedratvirus	33.2	5.9e-21
WP_002324226.1|349880_351011_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_002324225.1|350997_352191_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_002324224.1|352264_353230_-	lipid kinase	NA	NA	NA	NA	NA
WP_002294548.1|353825_354329_+	QueT transporter family protein	NA	E7DN70	Pneumococcus_phage	34.3	3.4e-07
WP_002324223.1|354384_355029_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_002294578.1|355190_355343_+	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_002294579.1|355366_355537_+	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
WP_002294580.1|355637_356183_+	transcription termination/antitermination protein NusG	NA	NA	NA	NA	NA
WP_002324222.1|356259_357147_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_002325971.1|357238_358339_+	L-lactate oxidase	NA	NA	NA	NA	NA
WP_002294584.1|358429_359302_-	L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha	NA	NA	NA	NA	NA
WP_002294585.1|359314_359983_-	L-serine ammonia-lyase, iron-sulfur-dependent, subunit beta	NA	NA	NA	NA	NA
WP_002291638.1|360325_360748_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
WP_002294587.1|360851_361541_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
WP_002291634.1|361866_362370_+	50S ribosomal protein L10	NA	NA	NA	NA	NA
WP_002294588.1|362422_362791_+	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
WP_002324219.1|362896_363586_+	TVP38/TMEM64 family protein	NA	NA	NA	NA	NA
WP_002301341.1|363667_364870_+	MFS transporter	NA	NA	NA	NA	NA
WP_002290558.1|365060_366593_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	28.0	3.3e-45
WP_002287787.1|366826_367528_+	glucosamine-6-phosphate deaminase	NA	NA	NA	NA	NA
WP_002287788.1|367782_368496_+	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	43.7	6.5e-20
WP_002298514.1|368805_369945_+	AI-2E family transporter	NA	NA	NA	NA	NA
WP_002287792.1|370033_370999_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A096XT60	Enterococcus_phage	70.4	3.4e-128
WP_100970385.1|371048_373208_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	62.5	4.4e-261
WP_002287795.1|373366_373591_-	glutaredoxin-like protein NrdH	NA	A0A0M7REK7	Lactobacillus_phage	42.7	1.7e-11
WP_002298509.1|373991_374465_+	ferrous iron transport protein A	NA	NA	NA	NA	NA
WP_002325976.1|374461_376594_+	ferrous iron transport protein B	NA	NA	NA	NA	NA
WP_002290587.1|376595_376730_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002287801.1|376823_377468_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002287805.1|377654_378848_+	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	37.0	1.2e-29
WP_002298506.1|378840_380568_+	ABC transporter permease/substrate binding protein	NA	NA	NA	NA	NA
WP_098188814.1|380927_382106_-|transposase	IS256-like element ISEf1 family transposase	transposase	NA	NA	NA	NA
WP_002293041.1|382707_382905_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	78.5	3.9e-23
WP_002295273.1|383769_384027_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002323245.1|384134_385307_+|transposase	IS256-like element IS1542 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	88.8	1.3e-121
WP_002295271.1|385521_386496_+	choloylglycine hydrolase family protein	NA	M1HVK5	Paramecium_bursaria_Chlorella_virus	31.8	5.4e-25
WP_002299784.1|387034_387337_-	hypothetical protein	NA	NA	NA	NA	NA
WP_098188817.1|387423_388585_+|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	50.9	4.6e-79
WP_002322652.1|389459_390029_+	DUF1836 domain-containing protein	NA	NA	NA	NA	NA
WP_002299785.1|390015_390876_+	DegV family protein	NA	A0A1X9I5J4	Streptococcus_phage	24.4	4.6e-12
WP_002288850.1|391066_391771_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	41.6	5.8e-45
WP_002294131.1|391775_393611_+	cell wall metabolism sensor histidine kinase WalK	NA	W8CYF6	Bacillus_phage	37.7	5.2e-37
WP_002318504.1|393607_394924_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002288853.1|394924_395794_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002288854.1|395848_396658_+	MBL fold metallo-hydrolase	NA	A0A0C5AJ83	Bacteriophage	33.6	3.1e-34
WP_002288856.1|396760_397390_-	flavin reductase	NA	NA	NA	NA	NA
WP_002324211.1|397559_398852_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_002299792.1|398927_399590_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_002288862.1|399814_400099_+	co-chaperone GroES	NA	A0A221S4M3	uncultured_virus	40.2	2.0e-12
WP_002290607.1|400149_401775_+	chaperonin GroEL	NA	A0A219YK78	uncultured_virus	56.8	4.9e-156
WP_002323245.1|402141_403314_-|transposase	IS256-like element IS1542 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	88.8	1.3e-121
WP_098188814.1|403466_404645_-|transposase	IS256-like element ISEf1 family transposase	transposase	NA	NA	NA	NA
>prophage 27
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	408258	410567	2630073		Bacillus_virus(100.0%)	2	NA	NA
WP_002297685.1|408258_409731_+	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	45.0	1.6e-108
WP_002307174.1|409742_410567_+	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	56.8	7.9e-78
>prophage 28
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	426622	427783	2630073		Streptococcus_phage(100.0%)	1	NA	NA
WP_002287280.1|426622_427783_+	D-3-phosphoglycerate dehydrogenase	NA	M1NSB9	Streptococcus_phage	36.1	1.9e-61
>prophage 29
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	435493	441914	2630073		Bacillus_phage(66.67%)	4	NA	NA
WP_002287267.1|435493_437221_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	5.6e-49
WP_002287265.1|437217_439110_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	31.5	1.6e-60
WP_002324201.1|439810_440680_+	glyoxalase	NA	NA	NA	NA	NA
WP_002324200.1|440888_441914_+	serine hydrolase	NA	A0A076YS03	Mycobacterium_phage	28.0	5.0e-05
>prophage 30
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	461013	467244	2630073		Lactococcus_phage(25.0%)	7	NA	NA
WP_002289675.1|461013_461598_+	thymidine kinase	NA	A0A1W6JJU6	Lactococcus_phage	52.1	1.0e-47
WP_002289676.1|461600_462674_+	peptide chain release factor 1	NA	NA	NA	NA	NA
WP_002324194.1|462666_463506_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_002300130.1|463498_463678_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002318664.1|463699_464725_+	threonylcarbamoyl-AMP synthase	NA	S4VW33	Pandoravirus	43.0	4.6e-59
WP_002324193.1|464899_466144_+	serine hydroxymethyltransferase	NA	A0A219Y950	Aeromonas_phage	55.1	6.7e-105
WP_002324192.1|466296_467244_+	alpha/beta hydrolase	NA	A0A2P1EM31	Moumouvirus	42.3	7.2e-67
>prophage 31
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	476420	482647	2630073		Planktothrix_phage(33.33%)	4	NA	NA
WP_002299692.1|476420_477056_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.4	1.1e-26
WP_002289242.1|477073_477889_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_098188806.1|478574_480011_+	glycoside hydrolase family 1 protein	NA	A0A0B5JD41	Pandoravirus	29.2	8.8e-48
WP_100970389.1|480199_482647_+	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	50.7	8.1e-86
>prophage 32
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	492396	499190	2630073	tRNA	Planktothrix_phage(40.0%)	6	NA	NA
WP_002289332.1|492396_493467_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.5e-20
WP_002289330.1|493456_494410_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	33.2	3.0e-20
WP_098188804.1|494421_495432_+	helix-turn-helix domain-containing protein	NA	A0A288TXV8	Enterococcus_phage	40.8	2.8e-56
WP_002293995.1|495716_496538_-	NUDIX hydrolase	NA	G3MA14	Bacillus_virus	32.8	2.7e-25
WP_002289337.1|496634_496913_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002289325.1|497180_499190_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	38.3	1.4e-96
>prophage 33
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	505327	511448	2630073		Bacillus_phage(66.67%)	5	NA	NA
WP_002289507.1|505327_506437_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	Q6GZ03	Mycoplasma_phage	33.0	1.2e-20
WP_002289508.1|506645_507068_+	methylglyoxal synthase	NA	NA	NA	NA	NA
WP_002289509.1|507390_507927_+	folate family ECF transporter S component	NA	NA	NA	NA	NA
WP_100970391.1|507966_509730_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.2	1.5e-44
WP_002294013.1|509732_511448_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.3	1.7e-50
>prophage 34
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	521782	598472	2630073	transposase,tRNA	Bacillus_phage(13.33%)	63	NA	NA
WP_002287122.1|521782_522664_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	50.3	1.3e-73
WP_002294021.1|522963_523341_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000997695.1|523670_524849_+|transposase	IS256-like element ISEf1 family transposase	transposase	NA	NA	NA	NA
WP_100970394.1|525292_525907_+	SIS domain-containing protein	NA	NA	NA	NA	NA
WP_002294022.1|526679_528419_+	putative basic amino acid antiporter YfcC	NA	NA	NA	NA	NA
WP_002287126.1|528575_529760_+	beta-aspartyl-peptidase	NA	NA	NA	NA	NA
WP_100970395.1|529870_530074_+	CsbD family protein	NA	NA	NA	NA	NA
WP_002287128.1|530174_530837_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.7	2.5e-21
WP_002287129.1|530849_532352_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_002287130.1|532899_534579_+	ribonuclease J	NA	NA	NA	NA	NA
WP_002287132.1|534705_535185_+|tRNA	aminoacyl-tRNA deacylase	tRNA	NA	NA	NA	NA
WP_002287133.1|535403_536084_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_002287134.1|536091_537423_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_002287135.1|537437_538400_+	bifunctional oligoribonuclease/PAP phosphatase NrnA	NA	NA	NA	NA	NA
WP_002287137.1|538510_538849_+	alkylphosphonate utilization protein	NA	NA	NA	NA	NA
WP_002287139.1|538927_539635_+	zinc metallopeptidase	NA	NA	NA	NA	NA
WP_002287143.1|541526_542063_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_100970396.1|542140_543511_+	NOL1/NOP2/sun family putative RNA methylase	NA	NA	NA	NA	NA
WP_002287147.1|543577_543913_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002287150.1|543993_544851_-	Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_002287154.1|544957_545473_+|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	NA	NA	NA	NA
WP_002307275.1|545789_547175_+	multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase	NA	NA	NA	NA	NA
WP_002287156.1|547211_547889_+	YutD family protein	NA	NA	NA	NA	NA
WP_002287159.1|547896_548661_+	TIGR01457 family HAD-type hydrolase	NA	NA	NA	NA	NA
WP_002287161.1|548662_549322_+	TIGR01906 family membrane protein	NA	NA	NA	NA	NA
WP_002287163.1|549350_549860_-	phosphatidylglycerophosphatase A	NA	G3MBC5	Bacillus_virus	56.1	1.5e-39
WP_002296073.1|549971_550970_-	NAD(P)/FAD-dependent oxidoreductase	NA	Q9JRK7	Streptococcus_phage	54.1	2.6e-30
WP_002287167.1|551170_551755_+	peptidylprolyl isomerase	NA	A0A1V0S9I2	Catovirus	43.4	2.0e-27
WP_002296072.1|551831_553007_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_002287231.1|553088_553469_+	S1 RNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_002287172.1|553542_553905_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002301184.1|560093_560255_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002295312.1|560280_560475_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100970397.1|561239_562277_+	putrescine carbamoyltransferase	NA	M1I6M4	Paramecium_bursaria_Chlorella_virus	28.5	2.1e-14
WP_002301313.1|562388_563777_+	APC family permease	NA	NA	NA	NA	NA
WP_100970398.1|563763_564870_+	agmatine deiminase	NA	M1HCB6	Acanthocystis_turfacea_Chlorella_virus	52.9	7.8e-113
WP_087043335.1|565004_566167_-|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	51.3	1.2e-79
WP_100970400.1|566633_568406_+	AAA domain-containing protein	NA	K4I1H4	Acidithiobacillus_phage	26.7	1.9e-20
WP_098188799.1|568380_569673_+	guanosine 5'-monophosphate oxidoreductase	NA	NA	NA	NA	NA
WP_002292290.1|569852_570101_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_002338598.1|570300_570705_+	organic hydroperoxide resistance protein	NA	NA	NA	NA	NA
WP_002292292.1|570852_571896_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002301446.1|571910_572474_+	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_098188798.1|572790_573300_+	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	34.8	2.8e-17
WP_002298023.1|573399_574050_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002291914.1|574500_575439_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
WP_002291912.1|575451_576504_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_002292418.1|579890_580763_-	ROK family protein	NA	NA	NA	NA	NA
WP_002293868.1|581026_582973_-	PTS beta-glucoside transporter subunit IIBCA	NA	NA	NA	NA	NA
WP_002302078.1|583157_584597_+	sucrose-6-phosphate hydrolase	NA	NA	NA	NA	NA
WP_002302077.1|584598_585561_+	LacI family transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	25.8	2.3e-20
WP_098188796.1|585730_587157_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	40.2	7.9e-49
WP_002295182.1|587399_587855_+|transposase	IS200/IS605 family transposase	transposase	A0A0H3UZM0	Geobacillus_virus	38.2	4.3e-17
WP_002289255.1|588440_588671_-	resolvase	NA	NA	NA	NA	NA
WP_002289254.1|588900_589719_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002289253.1|589879_590569_+	N-acetylmannosamine-6-phosphate 2-epimerase	NA	NA	NA	NA	NA
WP_002295185.1|590582_592085_+	PTS transporter subunit EIIC	NA	NA	NA	NA	NA
WP_002295186.1|592097_592574_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA	NA
WP_100970401.1|592732_593572_-|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
WP_087043335.1|593642_594804_+|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	51.3	1.2e-79
WP_002287966.1|595022_595397_+	iron-sulfur cluster biosynthesis family protein	NA	NA	NA	NA	NA
WP_002287965.1|595510_596140_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_002294080.1|597143_598472_+	aminopeptidase C	NA	R4TV59	Phaeocystis_globosa_virus	38.1	7.3e-73
>prophage 35
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	603346	603907	2630073		Geobacillus_virus(100.0%)	1	NA	NA
WP_002287958.1|603346_603907_+	haloacid dehalogenase	NA	A0A0H3UZF4	Geobacillus_virus	45.1	2.3e-28
>prophage 36
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	607150	648027	2630073	integrase,transposase,tRNA	Bacillus_phage(25.0%)	35	598947:598963	635119:635135
598947:598963	attL	GATCAACGAGATCTTGC	NA	NA	NA	NA
WP_002287955.1|607150_608362_+|tRNA	tRNA 4-thiouridine(8) synthase ThiI	tRNA	NA	NA	NA	NA
WP_002287954.1|608811_609459_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
WP_002326024.1|609851_612497_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	43.1	1.4e-163
WP_100970402.1|612806_614120_+	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_002287951.1|614109_614763_+	HAD family phosphatase	NA	NA	NA	NA	NA
WP_000868132.1|615499_616585_+|transposase	transposase	transposase	A0A0A8WIF9	Clostridium_phage	28.3	4.5e-12
WP_001557544.1|616581_618474_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_000361059.1|618480_618858_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_000067268.1|619008_619791_+	aminoglycoside nucleotidyltransferase ANT(9)-Ia	NA	NA	NA	NA	NA
WP_001072201.1|619916_620648_-	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(A)	NA	E4ZFQ0	Streptococcus_phage	47.5	1.9e-51
WP_157809738.1|620705_620825_-	ErmCL family antibiotic resistance leader peptide	NA	NA	NA	NA	NA
WP_000195429.1|620887_622060_+|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_001028144.1|622189_623629_-	aminoglycoside O-phosphotransferase APH(2'')-Ia	NA	A0A1X9I6C2	Streptococcus_phage	100.0	3.8e-285
WP_000393259.1|623629_624022_-	GNAT family N-acetyltransferase	NA	A0A0N7GFH7	Staphylococcus_phage	100.0	6.9e-72
WP_000195429.1|624078_625251_-|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
WP_001092058.1|625730_626393_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_002294067.1|626920_627121_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	71.2	3.7e-21
WP_002287948.1|627374_629054_-	ribonuclease J	NA	NA	NA	NA	NA
WP_002287947.1|629055_629268_-	DNA-dependent RNA polymerase auxiliary subunit epsilon family protein	NA	NA	NA	NA	NA
WP_002296290.1|629660_631391_+	multidrug efflux ABC transporter subunit EfrA	NA	W8CYL7	Bacillus_phage	27.6	2.1e-43
WP_002299665.1|631387_633148_+	multidrug efflux ABC transporter subunit EfrB	NA	W8CYL7	Bacillus_phage	28.8	2.2e-53
WP_002296291.1|633242_633440_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002289401.1|633592_634078_+	gamma carbonic anhydrase family protein	NA	NA	NA	NA	NA
WP_002289402.1|634181_634775_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	55.6	8.9e-55
WP_002289403.1|634954_635482_+	hypothetical protein	NA	NA	NA	NA	NA
635119:635135	attR	GATCAACGAGATCTTGC	NA	NA	NA	NA
WP_002289404.1|635572_636310_+	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	40.0	2.3e-12
WP_002289405.1|636313_637231_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_002326506.1|637232_638462_+	GTPase HflX	NA	NA	NA	NA	NA
WP_100970403.1|638691_639072_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002287001.1|639111_640452_+	type I glutamate--ammonia ligase	NA	A0A1V0SJ53	Klosneuvirus	25.6	9.1e-07
WP_100970404.1|641644_643255_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	48.4	1.7e-145
WP_002294057.1|643546_644416_+	fructose-bisphosphate aldolase	NA	NA	NA	NA	NA
WP_002287941.1|644698_645877_-|transposase	IS256-like element ISEfm2 family transposase	transposase	NA	NA	NA	NA
WP_002325445.1|646217_646919_+	VanR-ABDEGLN family DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	37.8	4.7e-39
WP_100970405.1|646911_648027_+	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	26.6	2.6e-23
>prophage 37
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	662969	675546	2630073		Streptococcus_phage(50.0%)	13	NA	NA
WP_002294042.1|662969_664715_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	36.3	1.9e-49
WP_002292337.1|664734_665049_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_002296223.1|665073_665670_+	recombination protein RecR	NA	NA	NA	NA	NA
WP_002294039.1|665733_666378_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	52.6	4.2e-58
WP_002292340.1|666392_666722_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002300512.1|666735_667674_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	34.1	5.5e-35
WP_002298875.1|667709_668534_+	stage 0 sporulation family protein	NA	NA	NA	NA	NA
WP_002288076.1|668526_668874_+	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	41.1	5.1e-18
WP_002298874.1|668942_669815_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	60.4	4.0e-88
WP_002294035.1|669923_671045_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_002288081.1|671098_671701_-	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A288TZV3	Enterococcus_phage	58.6	1.7e-53
WP_002288083.1|672263_674453_-	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	66.6	1.8e-286
WP_002304285.1|674778_675546_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.2	8.0e-32
>prophage 38
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	679086	681803	2630073		Tupanvirus(50.0%)	2	NA	NA
WP_002317605.1|679086_680601_+	D-alanine--poly(phosphoribitol) ligase subunit DltA	NA	A0A2K9KZV5	Tupanvirus	28.7	4.0e-43
WP_002288090.1|680597_681803_+	D-alanyl-lipoteichoic acid biosynthesis protein DltB	NA	A0A125RNP0	Pseudomonas_phage	30.7	1.4e-19
>prophage 39
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	685447	686188	2630073		Pandoravirus(100.0%)	1	NA	NA
WP_002299607.1|685447_686188_+	MBL fold metallo-hydrolase	NA	S4VYV9	Pandoravirus	26.3	5.0e-07
>prophage 40
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	706131	708324	2630073		Enterococcus_phage(50.0%)	2	NA	NA
WP_002298006.1|706131_706986_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	A0A249XZQ2	Enterococcus_phage	38.7	8.9e-40
WP_002301369.1|706986_708324_+	exodeoxyribonuclease VII large subunit	NA	L7RDW5	Acanthamoeba_polyphaga_moumouvirus	29.5	8.8e-26
>prophage 41
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	729333	733707	2630073	tRNA	Bodo_saltans_virus(50.0%)	2	NA	NA
WP_002286621.1|729333_732132_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A2H4UVG0	Bodo_saltans_virus	26.4	1.6e-74
WP_002286618.1|732180_733707_-	glucose-6-phosphate dehydrogenase	NA	H6WFS4	Cyanophage	35.3	8.9e-75
>prophage 42
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	736815	738093	2630073		Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)	1	NA	NA
WP_002337652.1|736815_738093_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	28.8	5.8e-35
>prophage 43
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	745994	746270	2630073	integrase	Lactococcus_phage(100.0%)	1	745528:745541	748883:748896
745528:745541	attL	GAAAATGTTAAAGT	NA	NA	NA	NA
WP_002391754.1|745994_746270_-|integrase	tyrosine-type recombinase/integrase	integrase	Q9AZR0	Lactococcus_phage	63.8	2.7e-14
WP_002391754.1|745994_746270_-|integrase	tyrosine-type recombinase/integrase	integrase	Q9AZR0	Lactococcus_phage	63.8	2.7e-14
748883:748896	attR	ACTTTAACATTTTC	NA	NA	NA	NA
>prophage 44
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	754773	758225	2630073		Enterobacteria_phage(50.0%)	4	NA	NA
WP_002286449.1|754773_755640_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	62.5	3.7e-102
WP_002286442.1|755653_756226_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	49.2	8.3e-42
WP_002294532.1|756247_757276_+	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	42.9	6.4e-69
WP_002324414.1|757373_758225_+	dTDP-4-dehydrorhamnose reductase	NA	I7HXC9	Enterobacteria_phage	39.0	4.9e-38
>prophage 45
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	762643	763864	2630073		Staphylococcus_phage(100.0%)	1	NA	NA
WP_002289079.1|762643_763864_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.9	1.1e-11
>prophage 46
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	773179	781332	2630073		uncultured_marine_virus(25.0%)	7	NA	NA
WP_002295420.1|773179_774151_+	glycosyltransferase	NA	A0A0F7L2F7	uncultured_marine_virus	35.5	6.6e-07
WP_002330257.1|774217_775651_+	O-antigen ligase family protein	NA	NA	NA	NA	NA
WP_002295416.1|775686_776511_+	LicD family protein	NA	NA	NA	NA	NA
WP_002295415.1|776576_777548_+	glycosyltransferase	NA	A0A1V0SAH6	Catovirus	29.1	2.1e-05
WP_002295413.1|777558_778983_+	membrane protein	NA	NA	NA	NA	NA
WP_002295412.1|779184_780132_+	NAD-dependent epimerase/dehydratase family protein	NA	A0A1V0SKV4	Klosneuvirus	38.1	1.5e-51
WP_010777078.1|780171_781332_-	serine hydrolase	NA	A0A2R4AS58	Mycobacterium_phage	25.2	1.9e-08
>prophage 47
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	789157	796632	2630073		Indivirus(20.0%)	8	NA	NA
WP_033624212.1|789157_790072_+	cation transporter	NA	A0A1V0SED0	Indivirus	31.5	2.1e-10
WP_002292862.1|790119_790590_+	GtrA family protein	NA	NA	NA	NA	NA
WP_002298541.1|790674_791283_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	60.6	2.6e-70
WP_002292860.1|791416_791617_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	67.7	7.6e-19
WP_002295400.1|792371_793598_+	LytR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010722490.1|793705_794176_-	tryptophan-rich sensory protein	NA	NA	NA	NA	NA
WP_002292856.1|794497_795076_+	chitin-binding protein	NA	A0A0K1Y848	Apis_mellifera_filamentous_virus	34.4	9.7e-14
WP_002295399.1|795249_796632_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	37.4	3.5e-86
>prophage 48
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	802997	810378	2630073	protease	Streptococcus_phage(33.33%)	6	NA	NA
WP_002298237.1|802997_804578_+	peptide chain release factor 3	NA	A0A1B0RXH7	Streptococcus_phage	28.4	5.1e-33
WP_002287661.1|804774_804999_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002290825.1|805203_805524_-	DUF1827 family protein	NA	NA	NA	NA	NA
WP_002287598.1|805671_807906_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A223W0B1	Agrobacterium_phage	39.1	5.1e-127
WP_002287602.1|808384_808651_+	phosphocarrier protein HPr	NA	NA	NA	NA	NA
WP_100970409.1|808650_810378_+	phosphoenolpyruvate--protein phosphotransferase	NA	A0A1V0SGR7	Hokovirus	35.9	9.3e-20
>prophage 49
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	818172	818910	2630073		Trichoplusia_ni_ascovirus(100.0%)	1	NA	NA
WP_002287617.1|818172_818910_+	3-oxoacyl-[acyl-carrier-protein] reductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	29.7	4.1e-17
>prophage 50
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	826322	826970	2630073		Bacillus_virus(100.0%)	1	NA	NA
WP_008264585.1|826322_826970_+	nicotinate-nucleotide adenylyltransferase	NA	G3MA22	Bacillus_virus	33.2	2.8e-22
>prophage 51
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	834364	838691	2630073	tRNA	Streptococcus_phage(50.0%)	3	NA	NA
WP_002339670.1|834364_836188_+	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	29.1	3.8e-64
WP_002287649.1|836234_836414_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
WP_002287651.1|836750_838691_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	35.2	3.3e-114
>prophage 52
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	843498	850093	2630073		Moraxella_phage(50.0%)	4	NA	NA
WP_010726397.1|843498_844935_+	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	29.0	2.9e-43
WP_002290958.1|845104_846301_+	multidrug efflux MFS transporter	NA	NA	NA	NA	NA
WP_002295359.1|846362_846548_-	YjzD family protein	NA	NA	NA	NA	NA
WP_100970413.1|846778_850093_+	DNA polymerase III subunit alpha	NA	A0A291AWR1	Streptomyces_phage	32.6	2.8e-150
>prophage 53
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	855179	858982	2630073		Synechococcus_phage(33.33%)	3	NA	NA
WP_002298263.1|855179_856601_+	NADP-dependent phosphogluconate dehydrogenase	NA	A0A1D8KPW3	Synechococcus_phage	31.1	4.2e-34
WP_002290973.1|856793_857480_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	31.2	4.8e-28
WP_002336942.1|857476_858982_+	HAMP domain-containing histidine kinase	NA	Q8QNA2	Ectocarpus_siliculosus_virus	25.1	3.9e-06
>prophage 54
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	888028	890286	2630073	transposase	Paramecium_bursaria_Chlorella_virus(50.0%)	2	NA	NA
WP_002295271.1|888028_889003_+	choloylglycine hydrolase family protein	NA	M1HVK5	Paramecium_bursaria_Chlorella_virus	31.8	5.4e-25
WP_002323245.1|889113_890286_-|transposase	IS256-like element IS1542 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	88.8	1.3e-121
>prophage 55
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	894082	899094	2630073		Bacillus_phage(66.67%)	3	NA	NA
WP_002319273.1|894082_896554_+	cation-translocating P-type ATPase	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	29.2	5.4e-45
WP_002297195.1|896656_898393_-	two-component sensor histidine kinase	NA	W8CYF6	Bacillus_phage	34.1	1.2e-27
WP_002293705.1|898389_899094_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	36.2	1.4e-38
>prophage 56
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	902758	903313	2630073		Lactobacillus_phage(100.0%)	1	NA	NA
WP_002293714.1|902758_903313_-	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	29.3	2.3e-12
>prophage 57
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	909653	918537	2630073	transposase	Streptococcus_phage(75.0%)	6	NA	NA
WP_010718207.1|909653_911777_+|transposase	transposase	transposase	A0A1S5SF30	Streptococcus_phage	58.9	1.6e-175
WP_100970417.1|911773_912781_+	peptidase P60	NA	A0A1S5SEZ8	Streptococcus_phage	64.0	1.0e-119
WP_100970418.1|914176_915317_+|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	57.7	2.2e-78
WP_100970419.1|916125_916512_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100970420.1|916493_917003_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100970421.1|917832_918537_+	CpsD/CapB family tyrosine-protein kinase	NA	A0A1X9I5D6	Streptococcus_phage	36.4	3.1e-22
>prophage 58
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	925026	934420	2630073		Streptococcus_phage(60.0%)	10	NA	NA
WP_100970428.1|925026_926142_+	UDP-galactopyranose mutase	NA	E4ZFQ1	Streptococcus_phage	77.1	7.3e-167
WP_100970429.1|926128_927553_+	flippase	NA	NA	NA	NA	NA
WP_100970430.1|927611_928892_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157809741.1|928990_930139_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	27.1	1.4e-24
WP_100970431.1|930220_931093_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	50.0	8.1e-73
WP_100970432.1|931287_932208_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_100970433.1|932272_932848_+	VanZ family protein	NA	NA	NA	NA	NA
WP_010721264.1|932967_933549_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010718184.1|933759_934182_+	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	26.6	4.7e-10
WP_010718183.1|934174_934420_+	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	44.4	6.3e-07
>prophage 59
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	949625	959441	2630073	tRNA	Streptococcus_phage(50.0%)	9	NA	NA
WP_002293942.1|949625_950342_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.7	1.0e-33
WP_002288588.1|950341_951790_+	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	29.3	1.7e-19
WP_002288586.1|951859_952369_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002297641.1|952358_953084_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002297640.1|953306_955427_-	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	58.3	3.7e-220
WP_002322842.1|955656_956835_+	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	48.9	5.1e-102
WP_002293935.1|956850_957609_+	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	36.9	8.5e-26
WP_002288577.1|957631_958117_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_002288576.1|958187_959441_-	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	55.3	7.7e-24
>prophage 60
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	965494	968014	2630073		Staphylococcus_phage(50.0%)	2	NA	NA
WP_100970436.1|965494_967294_-	glycerophosphodiester phosphodiesterase	NA	I6XE30	Staphylococcus_phage	26.5	5.3e-10
WP_002287776.1|967417_968014_-	TVP38/TMEM64 family protein	NA	M1Q152	Streptococcus_phage	41.7	8.7e-34
>prophage 61
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	972255	979079	2630073		Paramecium_bursaria_Chlorella_virus(25.0%)	7	NA	NA
WP_002301324.1|972255_973230_+	choloylglycine hydrolase family protein	NA	M1H001	Paramecium_bursaria_Chlorella_virus	29.7	6.6e-23
WP_002293915.1|973554_975450_+	asparagine synthase (glutamine-hydrolyzing)	NA	F2Y2L7	Organic_Lake_phycodnavirus	26.2	6.0e-20
WP_002288531.1|975644_976091_-	DUF2188 domain-containing protein	NA	NA	NA	NA	NA
WP_002296119.1|976318_976468_+	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_002296121.1|976555_977074_+	dihydrofolate reductase	NA	G3MBI7	Bacillus_virus	39.1	7.1e-24
WP_002293906.1|977150_978107_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002325771.1|978272_979079_+	ABC transporter ATP-binding protein	NA	A0A1V0SJ29	Klosneuvirus	32.1	1.3e-13
>prophage 62
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	986878	993291	2630073	tRNA	Hokovirus(33.33%)	7	NA	NA
WP_002288452.1|986878_987868_+	UDP-glucose 4-epimerase GalE	NA	A0A1V0SG19	Hokovirus	36.8	2.1e-48
WP_002288451.1|987879_989364_+	UDP-glucose--hexose-1-phosphate uridylyltransferase	NA	NA	NA	NA	NA
WP_002288449.1|989387_990368_+	LacI family DNA-binding transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	28.9	5.8e-19
WP_002288447.1|990456_991281_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	tRNA	NA	NA	NA	NA
WP_002288446.1|991264_991807_+	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA	NA
WP_002288445.1|991813_992278_+	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA	NA
WP_002293887.1|992274_993291_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	41.4	5.4e-60
>prophage 63
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	998882	1000574	2630073	tRNA	Orpheovirus(100.0%)	1	NA	NA
WP_002288432.1|998882_1000574_+|tRNA	arginine--tRNA ligase	tRNA	A0A2I2L3K1	Orpheovirus	32.6	2.9e-74
>prophage 64
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1007216	1008029	2630073		Flavobacterium_phage(100.0%)	1	NA	NA
WP_002294134.1|1007216_1008029_+	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	46.8	2.0e-25
>prophage 65
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1012243	1021353	2630073		Clostridium_phage(50.0%)	6	NA	NA
WP_002319369.1|1012243_1016596_+	PolC-type DNA polymerase III	NA	A0A0K2SUJ2	Clostridium_phage	41.4	3.9e-22
WP_002326917.1|1016739_1017213_+	ribosome maturation factor RimP	NA	NA	NA	NA	NA
WP_002319370.1|1017235_1018411_+	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
WP_002288501.1|1018432_1018726_+	YlxR family protein	NA	NA	NA	NA	NA
WP_002288509.1|1018722_1019034_+	YlxQ-related RNA-binding protein	NA	NA	NA	NA	NA
WP_002294141.1|1019046_1021353_+	translation initiation factor IF-2	NA	A0A2H4UTS4	Bodo_saltans_virus	23.7	3.6e-19
>prophage 66
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1038998	1046402	2630073		Chrysochromulina_ericina_virus(50.0%)	6	NA	NA
WP_010718131.1|1038998_1040165_+	oxygen-independent coproporphyrinogen III oxidase	NA	A0A0N7G7K6	Chrysochromulina_ericina_virus	33.6	5.0e-09
WP_002339984.1|1040399_1041443_+	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA	NA
WP_002296525.1|1041536_1042100_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_002292134.1|1042150_1043980_+	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	48.8	2.2e-136
WP_002289374.1|1044130_1045297_+	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	25.7	1.9e-24
WP_002292113.1|1045664_1046402_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	44.7	2.8e-34
>prophage 67
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1050168	1058231	2630073		Streptococcus_phage(50.0%)	6	NA	NA
WP_002319652.1|1050168_1052985_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	57.4	4.7e-311
WP_002294441.1|1053247_1054513_+	D-aspartate ligase	NA	NA	NA	NA	NA
WP_002294440.1|1054516_1055248_+	aspartate racemase	NA	NA	NA	NA	NA
WP_002289695.1|1055382_1056267_+	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	31.4	5.4e-08
WP_002306471.1|1056263_1057262_+	YvcK family protein	NA	A1IMD5	Streptococcus_phage	62.9	4.4e-115
WP_002289698.1|1057295_1058231_+	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	39.1	2.0e-53
>prophage 68
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1069002	1072533	2630073		Paramecium_bursaria_Chlorella_virus(50.0%)	3	NA	NA
WP_098188981.1|1069002_1070808_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	A7IW18	Paramecium_bursaria_Chlorella_virus	38.5	8.3e-96
WP_098188982.1|1071216_1071495_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002324980.1|1071507_1072533_+	signal peptide peptidase SppA	NA	A0A2I6UH21	Salinibacter_virus	33.1	3.2e-20
>prophage 69
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1075973	1077224	2630073	protease	Bacillus_virus(100.0%)	1	NA	NA
WP_002294425.1|1075973_1077224_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	62.5	5.5e-147
>prophage 70
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1085401	1089689	2630073		Bacillus_phage(50.0%)	2	NA	NA
WP_100970442.1|1085401_1087636_+	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	40.1	2.1e-125
WP_002323115.1|1087652_1089689_+	NAD-dependent DNA ligase LigA	NA	A0A289ZTZ3	Serratia_phage	37.1	4.8e-100
>prophage 71
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1093008	1097401	2630073		Catovirus(33.33%)	4	NA	NA
WP_002326946.1|1093008_1094064_+	diacylglycerol kinase	NA	A0A1V0SBJ0	Catovirus	27.7	8.5e-16
WP_002323988.1|1094174_1095548_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	D0R096	Streptococcus_phage	55.9	2.5e-140
WP_002295229.1|1095550_1095679_+	30S ribosomal protein S9	NA	NA	NA	NA	NA
WP_100970443.1|1096387_1097401_+	alpha/beta hydrolase	NA	M1PGN2	Moumouvirus	24.7	1.6e-11
>prophage 72
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1100859	1102743	2630073		Herpes_simplex_virus(100.0%)	1	NA	NA
WP_002323992.1|1100859_1102743_+	beta-galactosidase large subunit	NA	L0N6M2	Herpes_simplex_virus	34.6	3.8e-99
>prophage 73
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1106477	1107644	2630073		Pandoravirus(100.0%)	1	NA	NA
WP_002323995.1|1106477_1107644_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	35.3	2.1e-39
>prophage 74
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1111457	1113194	2630073		Enterobacteria_phage(100.0%)	1	NA	NA
WP_100970444.1|1111457_1113194_-	ATP-binding protein	NA	Q9EYF3	Enterobacteria_phage	30.6	5.0e-21
>prophage 75
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1126754	1127486	2630073		Bacillus_phage(100.0%)	1	NA	NA
WP_002319128.1|1126754_1127486_+	serine/threonine protein phosphatase	NA	A7KV25	Bacillus_phage	29.2	1.3e-15
>prophage 76
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1134147	1137674	2630073		Bacillus_phage(100.0%)	2	NA	NA
WP_002319133.1|1134147_1136793_+	DNA polymerase I	NA	F8WQ35	Bacillus_phage	35.7	3.0e-54
WP_100970447.1|1136837_1137674_+	DNA-formamidopyrimidine glycosylase	NA	A0A127AWE5	Bacillus_phage	29.8	8.7e-24
>prophage 77
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1140860	1220396	2630073	capsid,transposase,terminase,integrase,portal,protease,tRNA,holin,plate,tail	Bacillus_phage(22.22%)	91	1157307:1157324	1202341:1202358
WP_002288331.1|1140860_1141787_+	primosomal protein DnaI	NA	S5MU12	Brevibacillus_phage	41.3	5.1e-33
WP_002319138.1|1141915_1142356_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002319139.1|1142499_1143201_+|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_002288338.1|1143197_1144319_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_002288340.1|1144333_1145566_+	peptidase T	NA	NA	NA	NA	NA
WP_002327863.1|1145697_1146606_+	YegS/Rv2252/BmrU family lipid kinase	NA	NA	NA	NA	NA
WP_002288344.1|1146640_1146913_+	DUF1294 domain-containing protein	NA	NA	NA	NA	NA
WP_002319142.1|1146923_1147970_+	flippase-like domain-containing protein	NA	NA	NA	NA	NA
WP_002319145.1|1149552_1149972_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002325739.1|1149985_1150558_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002319148.1|1150573_1150789_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002297271.1|1150981_1151941_-|transposase	IS30-like element IS6770 family transposase	transposase	NA	NA	NA	NA
WP_100970448.1|1152171_1154781_+	ATP-dependent chaperone ClpB	NA	A0A2I7SAX5	Vibrio_phage	35.0	7.2e-133
WP_002319150.1|1154927_1155599_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002301556.1|1155591_1156086_-	nucleoside 2-deoxyribosyltransferase	NA	A0A1W6JK28	Lactococcus_phage	56.5	3.2e-42
WP_100970449.1|1156105_1157326_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
1157307:1157324	attL	CTAAAATCTTTTTGATCC	NA	NA	NA	NA
WP_002319153.1|1157472_1159308_+	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	24.4	4.4e-20
WP_100970450.1|1159400_1160537_-|integrase	site-specific integrase	integrase	A0A2I7SCV1	Paenibacillus_phage	55.1	1.3e-115
WP_043902436.1|1160714_1161659_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002324932.1|1161781_1162348_-	DUF5067 domain-containing protein	NA	NA	NA	NA	NA
WP_002324931.1|1162412_1162841_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
WP_002309074.1|1162847_1163240_-	helix-turn-helix transcriptional regulator	NA	O03970	Lactobacillus_phage	38.6	1.6e-15
WP_002309076.1|1163378_1163633_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_100970451.1|1163845_1164391_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002326982.1|1164396_1164675_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100970452.1|1164993_1165935_+	endonuclease	NA	D2IZK1	Enterococcus_phage	77.6	1.1e-142
WP_123837723.1|1165934_1166042_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002303277.1|1166028_1166919_+	hypothetical protein	NA	D2IYT9	Enterococcus_phage	84.5	6.2e-137
WP_100970453.1|1166967_1167858_+	DnaD domain protein	NA	NA	NA	NA	NA
WP_002331685.1|1167850_1168210_+	DUF1064 domain-containing protein	NA	Q4ZDX8	Staphylococcus_virus	47.1	2.0e-17
WP_002313600.1|1168224_1168386_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100970454.1|1168382_1168709_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100970455.1|1168705_1168909_+	toxin PIN	NA	NA	NA	NA	NA
WP_060812766.1|1168905_1169205_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002309101.1|1169226_1169454_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_010776806.1|1169600_1169780_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002309105.1|1169882_1170470_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100970456.1|1170815_1171646_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100970457.1|1171706_1171931_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100970458.1|1171973_1172678_+	hypothetical protein	NA	A0A2P1JTW4	Anoxybacillus_phage	49.8	1.4e-43
WP_100970459.1|1172661_1173951_+|terminase	PBSX family phage terminase large subunit	terminase	A0A0B5CYJ6	Listeria_phage	58.4	4.6e-149
WP_100970460.1|1173966_1175466_+|portal	phage portal protein	portal	A0A1S5SAH6	Streptococcus_phage	44.5	8.4e-110
WP_100970461.1|1175465_1176629_+|capsid	capsid protein	capsid	Q5YA73	Bacillus_phage	59.2	2.1e-132
WP_100970462.1|1176739_1177297_+|capsid	capsid protein	capsid	M1HNV6	Streptococcus_phage	32.4	3.2e-14
WP_100970463.1|1177310_1178198_+|capsid	phage capsid protein	capsid	Q5YA70	Bacillus_phage	67.9	1.0e-110
WP_100970608.1|1178215_1178464_+	Ig domain-containing protein	NA	A5GYM0	Lactococcus_phage	71.8	4.3e-19
WP_010732313.1|1178496_1178901_+	hypothetical protein	NA	Q5YA68	Bacillus_phage	62.7	6.5e-41
WP_038398697.1|1178894_1179236_+	phage Gp9 family protein	NA	Q5YA67	Bacillus_phage	60.2	3.1e-36
WP_038398699.1|1179235_1179562_+|capsid	phage capsid protein	capsid	Q5YA66	Bacillus_phage	54.4	1.1e-27
WP_038398701.1|1179561_1179963_+|capsid	phage capsid protein	capsid	Q5YA65	Bacillus_phage	55.0	1.7e-38
WP_010732317.1|1179959_1180418_+	hypothetical protein	NA	Q5YA64	Bacillus_phage	49.0	2.9e-29
WP_100970464.1|1180398_1180758_+	fibronectin type III domain-containing protein	NA	NA	NA	NA	NA
WP_002313620.1|1180798_1181248_+	hypothetical protein	NA	B3GW11	Streptococcus_phage	31.5	2.7e-11
WP_100970465.1|1181256_1181838_+	hypothetical protein	NA	Q5YA62	Bacillus_phage	49.0	7.9e-40
WP_100970466.1|1181830_1185313_+	tape measure protein	NA	Q938K3	Temperate_phage	53.9	1.6e-10
WP_002345707.1|1185317_1186151_+|tail	phage tail family protein	tail	Q9T1A6	Listeria_phage	46.5	2.0e-60
WP_002345706.1|1186159_1187203_+	hypothetical protein	NA	Q9T1A5	Listeria_phage	53.8	4.8e-104
WP_100970467.1|1187202_1188249_+	hypothetical protein	NA	A0A059T661	Listeria_phage	31.9	5.8e-17
WP_100970468.1|1188248_1190327_+|plate	BppU family phage baseplate upper protein	plate	A0A0M4RT83	Enterococcus_phage	32.7	5.3e-30
WP_100970469.1|1190338_1190785_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002298029.1|1190786_1190924_+	XkdX family protein	NA	NA	NA	NA	NA
WP_100970470.1|1190959_1191202_+|holin	holin	holin	D2J075	Enterococcus_phage	62.0	9.9e-21
WP_002302122.1|1191217_1191415_+|holin	holin	holin	A0A0S2MYF6	Enterococcus_phage	85.9	7.8e-24
WP_100970471.1|1191425_1192703_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A0S2MYF3	Enterococcus_phage	69.2	8.9e-169
WP_002323017.1|1193085_1194258_+|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	99.2	5.0e-134
WP_034866830.1|1194335_1194845_+	DUF4065 domain-containing protein	NA	Q9AZD6	Lactococcus_phage	40.0	1.4e-19
WP_034866832.1|1194819_1195476_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100970472.1|1195869_1196133_+	hypothetical protein	NA	NA	NA	NA	NA
WP_100970473.1|1196379_1196682_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002326201.1|1198478_1198781_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002322938.1|1199201_1199381_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002298666.1|1201052_1201268_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002293041.1|1201530_1201728_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	78.5	3.9e-23
WP_002319174.1|1202119_1202911_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
1202341:1202358	attR	CTAAAATCTTTTTGATCC	NA	NA	NA	NA
WP_002327868.1|1203037_1204537_+	PTS transporter subunit EIIC	NA	NA	NA	NA	NA
WP_002298661.1|1204555_1205008_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_002327869.1|1205010_1207617_+	hypothetical protein	NA	NA	NA	NA	NA
WP_079995587.1|1207772_1208771_+	MFS transporter	NA	NA	NA	NA	NA
WP_002327871.1|1208751_1209480_+	ROK family protein	NA	NA	NA	NA	NA
WP_079995586.1|1209405_1209648_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002322258.1|1209765_1210026_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002299276.1|1210162_1210576_-	Hsp20/alpha crystallin family protein	NA	A0A1B2LRT2	Wolbachia_phage	31.5	2.1e-07
WP_098188714.1|1211031_1211517_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002289418.1|1211655_1211871_-	DUF378 domain-containing protein	NA	NA	NA	NA	NA
WP_002299273.1|1212094_1212895_+	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	26.2	2.0e-09
WP_002299268.1|1214771_1215263_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_100970476.1|1215250_1215805_+	PTS glucitol/sorbitol transporter subunit IIC	NA	NA	NA	NA	NA
WP_002326991.1|1215822_1216818_+	PTS glucitol/sorbitol transporter subunit IIB	NA	NA	NA	NA	NA
WP_002319298.1|1216835_1217234_+	PTS glucitol/sorbitol transporter subunit IIA	NA	NA	NA	NA	NA
WP_002299262.1|1218484_1219372_-	rotamase	NA	NA	NA	NA	NA
WP_002296628.1|1219556_1220396_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
>prophage 78
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1224625	1225627	2630073		Moumouvirus(100.0%)	1	NA	NA
WP_002322798.1|1224625_1225627_+	alpha/beta hydrolase	NA	M1PGN2	Moumouvirus	31.8	4.3e-09
>prophage 79
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1232434	1232635	2630073		Lactococcus_phage(100.0%)	1	NA	NA
WP_002293303.1|1232434_1232635_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	77.3	3.9e-23
>prophage 80
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1239013	1243091	2630073		Archaeal_BJ1_virus(50.0%)	5	NA	NA
WP_002298675.1|1239013_1239871_+	glycosyltransferase family 8 protein	NA	A0ZYL4	Archaeal_BJ1_virus	27.1	1.0e-19
WP_100970478.1|1239863_1240766_+	glycosyltransferase family 8 protein	NA	NA	NA	NA	NA
WP_002298673.1|1240797_1241148_+	iron-sulfur cluster biosynthesis family protein	NA	NA	NA	NA	NA
WP_002318987.1|1241181_1242120_+	magnesium transporter CorA family protein	NA	NA	NA	NA	NA
WP_002324048.1|1242197_1243091_+	SDR family oxidoreductase	NA	A0A2N9QUX2	Trichoplusia_ni_ascovirus	46.4	2.8e-60
>prophage 81
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1268556	1270086	2630073		Enterococcus_phage(100.0%)	1	NA	NA
WP_002288179.1|1268556_1270086_-	alkyl hydroperoxide reductase subunit F	NA	A0A249XZT7	Enterococcus_phage	33.0	3.9e-38
>prophage 82
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1288966	1292038	2630073		Tupanvirus(50.0%)	3	NA	NA
WP_002324076.1|1288966_1290133_+	class I SAM-dependent methyltransferase	NA	A0A2K9L4K8	Tupanvirus	39.3	1.6e-47
WP_002298449.1|1290362_1291010_+	lipoprotein	NA	NA	NA	NA	NA
WP_002295918.1|1291093_1292038_+	dihydroorotate oxidase	NA	A0A1V0SH91	Hokovirus	44.4	5.2e-65
>prophage 83
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1295265	1298277	2630073		Bacillus_phage(50.0%)	4	NA	NA
WP_002298443.1|1295265_1295955_+	hypothetical protein	NA	U5PU21	Bacillus_phage	33.2	1.1e-19
WP_002295913.1|1295960_1296917_+	sce7725 family protein	NA	NA	NA	NA	NA
WP_002318361.1|1296960_1297473_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002295911.1|1297728_1298277_-	AAA family ATPase	NA	S4W1R9	Pandoravirus	29.4	3.3e-11
>prophage 84
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1310454	1311303	2630073		Staphylococcus_phage(100.0%)	1	NA	NA
WP_002298432.1|1310454_1311303_+	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	37.4	9.8e-15
>prophage 85
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1322701	1328224	2630073	transposase	Bacillus_phage(66.67%)	5	NA	NA
WP_100970485.1|1322701_1324128_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	40.2	1.0e-48
WP_002297809.1|1324216_1325557_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_002286063.1|1325561_1326236_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.3	1.1e-29
WP_002300612.1|1326458_1327532_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_002286060.1|1327537_1328224_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.0	1.9e-29
>prophage 86
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1344534	1346763	2630073		Streptococcus_phage(100.0%)	1	NA	NA
WP_002324101.1|1344534_1346763_-	type IA DNA topoisomerase	NA	A0A1X9I6W8	Streptococcus_phage	52.3	8.6e-127
>prophage 87
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1349937	1350708	2630073		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_002289629.1|1349937_1350708_-	ATP-binding cassette domain-containing protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	27.3	9.6e-09
>prophage 88
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1364674	1370976	2630073		Halovirus(25.0%)	6	NA	NA
WP_002299712.1|1364674_1365751_-	carbamoyl phosphate synthase small subunit	NA	R4TGJ8	Halovirus	36.2	2.6e-60
WP_002288875.1|1365755_1367036_-	dihydroorotase	NA	NA	NA	NA	NA
WP_002288872.1|1367054_1367981_-	aspartate carbamoyltransferase catalytic subunit	NA	M1HWF9	Paramecium_bursaria_Chlorella_virus	33.0	3.6e-26
WP_002288870.1|1367993_1369277_-	uracil transporter	NA	Q9KX94	Enterobacteria_phage	37.3	3.2e-65
WP_002295862.1|1369290_1369830_-	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA	NA	NA	NA	NA
WP_100970489.1|1370064_1370976_-	RluA family pseudouridine synthase	NA	A0A2H4UV25	Bodo_saltans_virus	31.0	2.2e-12
>prophage 89
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1374537	1374771	2630073		Lactococcus_phage(100.0%)	1	NA	NA
WP_002303804.1|1374537_1374771_+	cold shock domain-containing protein	NA	Q9AZD3	Lactococcus_phage	49.2	5.6e-13
>prophage 90
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1377896	1382752	2630073	tRNA	Tupanvirus(50.0%)	3	NA	NA
WP_002299704.1|1377896_1380539_-|tRNA	alanine--tRNA ligase	tRNA	A0A2K9L3D8	Tupanvirus	34.4	7.4e-69
WP_002295842.1|1380926_1381358_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002289190.1|1381402_1382752_-	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	31.7	3.6e-51
>prophage 91
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1387092	1390943	2630073	transposase	Emiliania_huxleyi_virus(33.33%)	3	NA	NA
WP_002299697.1|1387092_1388283_-	glycine C-acetyltransferase	NA	D2TEZ5	Emiliania_huxleyi_virus	33.3	8.3e-52
WP_002323245.1|1388544_1389717_+|transposase	IS256-like element IS1542 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	88.8	1.3e-121
WP_002289185.1|1390259_1390943_-	HD domain-containing protein	NA	A0A1D6Y7U0	Golden_Marseillevirus	29.9	2.5e-13
>prophage 92
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1395441	1396089	2630073		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_002289604.1|1395441_1396089_+	Holliday junction resolvase RecU	NA	A0A2H4J3A4	uncultured_Caudovirales_phage	37.5	1.7e-22
>prophage 93
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1400099	1400798	2630073		Bacillus_phage(100.0%)	1	NA	NA
WP_002289610.1|1400099_1400798_-	DnaD domain protein	NA	A0A0N7AE27	Bacillus_phage	42.5	4.9e-12
>prophage 94
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1405689	1415851	2630073	transposase	Streptococcus_phage(16.67%)	9	NA	NA
WP_002296093.1|1405689_1406616_-	cysteine synthase A	NA	A0A1X9I5K7	Streptococcus_phage	57.2	2.7e-98
WP_002295819.1|1406755_1407643_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A0K2CP65	Brevibacillus_phage	43.2	4.5e-18
WP_002323017.1|1407849_1409022_+|transposase	IS256-like element IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	99.2	5.0e-134
WP_002295818.1|1409220_1411218_-	transketolase	NA	NA	NA	NA	NA
WP_002295816.1|1411319_1411571_-	DUF896 family protein	NA	NA	NA	NA	NA
WP_002322319.1|1411708_1412341_+	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	59.4	2.3e-16
WP_002297436.1|1412520_1412739_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002295813.1|1413027_1413540_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.6	2.4e-32
WP_002297438.1|1413553_1415851_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	34.1	4.3e-81
>prophage 95
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1421843	1426054	2630073		Pithovirus(50.0%)	3	NA	NA
WP_100970494.1|1421843_1422779_-	alpha/beta hydrolase	NA	W5S4D8	Pithovirus	25.4	2.0e-05
WP_002295800.1|1424009_1425104_-	DUF871 domain-containing protein	NA	NA	NA	NA	NA
WP_002295798.1|1425292_1426054_+	peptidylprolyl isomerase	NA	A0A1V0S9I2	Catovirus	38.0	4.0e-23
>prophage 96
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1431197	1432553	2630073		Ugandan_cassava_brown_streak_virus(100.0%)	1	NA	NA
WP_002296875.1|1431197_1432553_-	ribonuclease PH	NA	A0A0P0A2M4	Ugandan_cassava_brown_streak_virus	30.8	9.2e-15
>prophage 97
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1435699	1436437	2630073		Planktothrix_phage(100.0%)	1	NA	NA
WP_002288042.1|1435699_1436437_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.6	1.3e-31
>prophage 98
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1440295	1445780	2630073	tRNA	Orpheovirus(50.0%)	3	NA	NA
WP_002295783.1|1440295_1441339_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2I2L4E3	Orpheovirus	33.6	1.9e-31
WP_002295781.1|1441647_1441989_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002301088.1|1442057_1445780_-	helicase-exonuclease AddAB subunit AddA	NA	S5MMD7	Bacillus_phage	23.5	7.1e-25
>prophage 99
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1449482	1450949	2630073		Acinetobacter_phage(100.0%)	1	NA	NA
WP_002288052.1|1449482_1450949_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	38.6	3.4e-87
>prophage 100
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1457842	1461508	2630073		Enterococcus_phage(50.0%)	4	NA	NA
WP_002299583.1|1457842_1458466_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A249XZV3	Enterococcus_phage	60.4	2.5e-36
WP_002300172.1|1459399_1459900_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002289113.1|1460089_1460434_-	metal-sulfur cluster assembly factor	NA	NA	NA	NA	NA
WP_002289114.1|1460587_1461508_-	YitT family protein	NA	M1Q1P6	Streptococcus_phage	30.0	1.3e-23
>prophage 101
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1464910	1469414	2630073		Streptococcus_phage(100.0%)	4	NA	NA
WP_002289118.1|1464910_1465537_+	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	50.5	5.3e-50
WP_002289120.1|1465559_1466264_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_002298973.1|1466455_1467289_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA	NA
WP_002289122.1|1467485_1469414_+	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	38.5	4.2e-106
>prophage 102
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1472572	1475378	2630073		Clostridium_botulinum_C_phage(50.0%)	2	NA	NA
WP_100970496.1|1472572_1474846_-	DNA internalization-related competence protein ComEC/Rec2	NA	Q332C0	Clostridium_botulinum_C_phage	31.3	1.3e-32
WP_002295503.1|1474838_1475378_-	ComE operon protein 2	NA	A7KUY9	Bacillus_phage	58.3	5.4e-35
>prophage 103
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1486117	1487890	2630073		Acanthamoeba_polyphaga_mimivirus(100.0%)	1	NA	NA
WP_002288736.1|1486117_1487890_-	DNA helicase RecQ	NA	A0A0G2Y8K9	Acanthamoeba_polyphaga_mimivirus	37.3	3.6e-83
>prophage 104
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1491356	1492763	2630073		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_002289686.1|1491356_1492763_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.5	2.8e-46
>prophage 105
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1496988	1506487	2630073		Streptococcus_phage(25.0%)	7	NA	NA
WP_002323380.1|1496988_1498413_-	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	24.1	8.5e-19
WP_002287992.1|1498676_1499654_-	GMP reductase	NA	G3MBI2	Bacillus_virus	80.4	2.7e-149
WP_002298996.1|1499910_1501116_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_002323445.1|1501117_1502644_-	sugar ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	30.1	8.2e-12
WP_002298998.1|1502697_1503786_-	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002287999.1|1504005_1505022_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002295478.1|1505035_1506487_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	29.1	4.1e-21
>prophage 106
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1510503	1522711	2630073		Prochlorococcus_phage(25.0%)	12	NA	NA
WP_002302313.1|1510503_1512039_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	49.1	5.3e-75
WP_002299006.1|1512035_1512614_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	38.8	5.8e-27
WP_100970609.1|1512610_1513651_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A1D7SE90	Cyanophage	43.8	1.6e-62
WP_002299010.1|1513682_1515122_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.9	2.4e-53
WP_002299012.1|1515106_1517329_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	41.4	1.1e-150
WP_002302316.1|1517329_1518001_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_002295474.1|1518002_1518257_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_002288021.1|1518256_1518985_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	E3SPA9	Prochlorococcus_phage	41.4	4.6e-45
WP_002297115.1|1519240_1519618_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002288023.1|1519797_1521093_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	33.1	4.5e-19
WP_002302886.1|1521105_1522239_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_002303771.1|1522222_1522711_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.7	1.9e-23
>prophage 107
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1531821	1536241	2630073	transposase	Clostridium_botulinum_C_phage(50.0%)	5	NA	NA
WP_002298743.1|1531821_1532439_-	glycoside hydrolase family 73 protein	NA	Q332B8	Clostridium_botulinum_C_phage	41.1	2.6e-25
WP_038809631.1|1532448_1533273_-	M15 family metallopeptidase	NA	NA	NA	NA	NA
WP_002295457.1|1533265_1533826_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002298741.1|1533999_1534956_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_002323245.1|1535068_1536241_-|transposase	IS256-like element IS1542 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	88.8	1.3e-121
>prophage 108
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1543116	1544136	2630073		Brazilian_cedratvirus(100.0%)	1	NA	NA
WP_002299757.1|1543116_1544136_-	lactate dehydrogenase	NA	A0A2R8FDS8	Brazilian_cedratvirus	34.3	1.1e-23
>prophage 109
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1549601	1553843	2630073		Oenococcus_phage(50.0%)	6	NA	NA
WP_002333533.1|1549601_1550972_-	hypothetical protein	NA	V9QKK6	Oenococcus_phage	22.1	4.2e-07
WP_002317672.1|1551064_1551415_+	fosmidomycin resistance protein	NA	NA	NA	NA	NA
WP_100970501.1|1551614_1551926_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002299840.1|1552132_1552336_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002299838.1|1552432_1552825_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002299583.1|1553219_1553843_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A249XZV3	Enterococcus_phage	60.4	2.5e-36
>prophage 110
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1558687	1559653	2630073		Planktothrix_phage(100.0%)	1	NA	NA
WP_002299396.1|1558687_1559653_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.7	1.5e-27
>prophage 111
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1571032	1578048	2630073		Bacillus_virus(66.67%)	3	NA	NA
WP_002289265.1|1571032_1573264_-	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	42.5	2.4e-169
WP_100970505.1|1573540_1575991_-	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	31.6	1.6e-97
WP_002317668.1|1576002_1578048_-	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	41.4	1.4e-115
>prophage 112
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1581310	1589637	2630073	protease,tRNA	Erwinia_phage(25.0%)	7	NA	NA
WP_002298110.1|1581310_1582711_-|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A173GFL6	Erwinia_phage	29.0	9.8e-44
WP_002288419.1|1582724_1583273_-	HslU--HslV peptidase proteolytic subunit	NA	NA	NA	NA	NA
WP_002288415.1|1583309_1584215_-	tyrosine recombinase XerC	NA	A0A0K2CP59	Brevibacillus_phage	29.4	9.4e-32
WP_045135963.1|1584412_1585789_-|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	tRNA	NA	NA	NA	NA
WP_002298115.1|1585757_1587836_-	type I DNA topoisomerase	NA	A0A167R9A0	Powai_lake_megavirus	38.5	1.2e-101
WP_002323421.1|1587956_1588814_-	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_002296990.1|1588869_1589637_-	ribonuclease HII	NA	D2TEQ2	Emiliania_huxleyi_virus	39.5	2.7e-27
>prophage 113
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1595244	1600327	2630073		Staphylococcus_phage(50.0%)	5	NA	NA
WP_002298122.1|1595244_1596087_-	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	40.2	6.5e-19
WP_002288393.1|1596218_1596872_+	hemolysin III family protein	NA	NA	NA	NA	NA
WP_100970507.1|1596934_1597462_-	dihydrofolate reductase	NA	A0A1D6X864	Bacillus_phage	37.1	1.1e-21
WP_002298126.1|1597481_1598429_-	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	64.6	7.1e-123
WP_002298128.1|1598440_1600327_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	29.8	2.0e-52
>prophage 114
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1603822	1606498	2630073	tRNA	unidentified_phage(50.0%)	3	NA	NA
WP_002323415.1|1603822_1605031_-|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	51.7	1.5e-45
WP_002290045.1|1605142_1605475_-	nucleotide pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_002294412.1|1605622_1606498_+	YitT family protein	NA	M1Q1P6	Streptococcus_phage	45.3	5.9e-63
>prophage 115
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1609708	1609984	2630073		Geobacillus_virus(100.0%)	1	NA	NA
WP_002290178.1|1609708_1609984_-	HU family DNA-binding protein	NA	A0A0H3UZA0	Geobacillus_virus	69.7	1.8e-26
>prophage 116
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1614512	1615916	2630073		Acanthamoeba_polyphaga_mimivirus(100.0%)	1	NA	NA
WP_002323412.1|1614512_1615916_-	ATP-dependent DNA helicase RecQ	NA	A0A0G2Y8K9	Acanthamoeba_polyphaga_mimivirus	35.7	1.5e-63
>prophage 117
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1623381	1625979	2630073		uncultured_Mediterranean_phage(66.67%)	4	NA	NA
WP_002296975.1|1623381_1623951_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	32.7	1.5e-14
WP_002296973.1|1623934_1624732_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	25.0	1.1e-07
WP_002298147.1|1624701_1625073_-	protein RibT	NA	NA	NA	NA	NA
WP_002294386.1|1625091_1625979_-	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	29.7	1.2e-31
>prophage 118
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1630051	1637259	2630073		Synechococcus_phage(25.0%)	5	NA	NA
WP_002289498.1|1630051_1631161_-	RNA polymerase sigma factor RpoD	NA	F4YCU2	Synechococcus_phage	38.9	9.8e-39
WP_087663872.1|1631184_1633026_-	DNA primase	NA	A0A1S5RH70	Helicobacter_phage	32.1	1.2e-49
WP_042959752.1|1633207_1635601_-	cation-translocating P-type ATPase	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	26.2	9.5e-39
WP_002298152.1|1635707_1636568_-	DUF368 domain-containing protein	NA	NA	NA	NA	NA
WP_002289460.1|1636626_1637259_-	transglycosylase SLT domain-containing protein	NA	A0A0N9SIT8	Bacillus_phage	38.1	5.6e-15
>prophage 119
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1640991	1645220	2630073		Aureococcus_anophage(50.0%)	4	NA	NA
WP_002289463.1|1640991_1642179_-	elongation factor Tu	NA	A0A076FFS6	Aureococcus_anophage	28.5	1.3e-33
WP_100970511.1|1642547_1642907_+	YxeA family protein	NA	NA	NA	NA	NA
WP_002294378.1|1643198_1644203_-	nucleoid-associated protein	NA	NA	NA	NA	NA
WP_002319269.1|1644368_1645220_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	41.4	1.4e-53
>prophage 120
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1651620	1654287	2630073		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_002294372.1|1651620_1654287_-	cation-translocating P-type ATPase	NA	M1HJQ2	Paramecium_bursaria_Chlorella_virus	30.1	1.6e-82
>prophage 121
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1676906	1678346	2630073		Pandoravirus(100.0%)	1	NA	NA
WP_002305084.1|1676906_1678346_-	glycoside hydrolase family 1 protein	NA	A0A0B5JD41	Pandoravirus	31.5	1.7e-51
>prophage 122
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1687704	1706697	2630073	tRNA	uncultured_virus(28.57%)	15	NA	NA
WP_002327341.1|1687704_1689876_-	copper/silver-translocating P-type ATPase CopB	NA	A0A218MNH6	uncultured_virus	32.3	5.0e-71
WP_016631313.1|1689895_1692082_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	38.7	4.1e-121
WP_002337817.1|1692081_1692291_-	copper chaperone CopZ	NA	NA	NA	NA	NA
WP_002294855.1|1692303_1692744_-	CopY/TcrY family copper transport repressor	NA	NA	NA	NA	NA
WP_100970514.1|1692817_1693357_-	topology modulation protein	NA	A0A097BYE2	Leuconostoc_phage	33.3	1.2e-18
WP_002288779.1|1693848_1695315_-	amino acid permease	NA	NA	NA	NA	NA
WP_002318936.1|1695625_1697707_-	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	35.7	1.1e-115
WP_002318937.1|1698230_1698590_-	YccF domain-containing protein	NA	NA	NA	NA	NA
WP_002323072.1|1698619_1698961_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002299532.1|1698957_1699632_-	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA	NA
WP_002291771.1|1700437_1701736_-|tRNA	asparagine--tRNA ligase	tRNA	A0A2P1EMB4	Moumouvirus	30.3	9.0e-60
WP_002305679.1|1701775_1702966_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_002321579.1|1702986_1703514_-	peptidase	NA	NA	NA	NA	NA
WP_100970515.1|1703560_1706350_-	DEAD/DEAH box helicase family protein	NA	A0A1X9I5C8	Streptococcus_phage	30.8	4.0e-89
WP_002288762.1|1706496_1706697_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	74.2	2.5e-22
>prophage 123
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1711968	1715845	2630073		Streptococcus_phage(50.0%)	4	NA	NA
WP_100970518.1|1711968_1713237_-	voltage-gated chloride channel family protein	NA	A0A1X9I5Z9	Streptococcus_phage	31.1	4.9e-42
WP_002323864.1|1713399_1714047_-	elongation factor G-binding protein	NA	NA	NA	NA	NA
WP_002289559.1|1714454_1714958_-	HD domain-containing protein	NA	NA	NA	NA	NA
WP_002323863.1|1715080_1715845_-	RNA methyltransferase	NA	A0A2D1A6G0	Rhodococcus_phage	26.1	4.9e-05
>prophage 124
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1722461	1723160	2630073		Streptococcus_phage(100.0%)	1	NA	NA
WP_087663853.1|1722461_1723160_-	CpsD/CapB family tyrosine-protein kinase	NA	A0A1X9I5D6	Streptococcus_phage	38.0	4.1e-27
>prophage 125
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1734469	1743201	2630073		Erwinia_phage(25.0%)	9	NA	NA
WP_002291698.1|1734469_1735441_-	PhoH family protein	NA	W8D063	Erwinia_phage	49.8	3.5e-48
WP_002303427.1|1736146_1737526_+	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA	NA
WP_002291695.1|1737681_1738128_-	GatB/YqeY domain-containing protein	NA	A0A292GL36	Xanthomonas_phage	38.8	1.6e-19
WP_002287321.1|1738154_1738331_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_002287322.1|1738492_1738921_-	transcriptional repressor	NA	NA	NA	NA	NA
WP_002291694.1|1739012_1739873_+	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
WP_002291691.1|1739967_1740261_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002305596.1|1740333_1742061_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	63.0	1.4e-209
WP_002291688.1|1742274_1743201_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	52.8	2.3e-89
>prophage 126
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1750646	1754182	2630073		Bacillus_phage(100.0%)	2	NA	NA
WP_002322632.1|1750646_1752431_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	4.6e-46
WP_002304603.1|1752430_1754182_-	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	31.2	4.8e-56
>prophage 127
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1758438	1759341	2630073		Bodo_saltans_virus(100.0%)	1	NA	NA
WP_002294962.1|1758438_1759341_-	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	30.7	3.4e-21
>prophage 128
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1765847	1766786	2630073		Bacillus_phage(100.0%)	1	NA	NA
WP_002289574.1|1765847_1766786_-	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	51.2	4.2e-75
>prophage 129
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1775161	1776742	2630073		Planktothrix_phage(50.0%)	2	NA	NA
WP_002289489.1|1775161_1775920_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.3	1.2e-19
WP_002289486.1|1775935_1776742_-	phosphate ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.4	1.8e-13
>prophage 130
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1782346	1783033	2630073		Planktothrix_phage(100.0%)	1	NA	NA
WP_002292768.1|1782346_1783033_-	cell division ATP-binding protein FtsE	NA	G9BWD6	Planktothrix_phage	34.7	2.5e-29
>prophage 131
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1788515	1791397	2630073		Streptococcus_phage(100.0%)	4	NA	NA
WP_002300484.1|1788515_1789829_-	DEAD/DEAH box helicase family protein	NA	A0A1X9I5S6	Streptococcus_phage	37.4	4.2e-65
WP_002292778.1|1789910_1790231_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_002292779.1|1790338_1790626_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002292780.1|1790752_1791397_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	52.3	1.0e-48
>prophage 132
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1794766	1795063	2630073		Staphylococcus_phage(100.0%)	1	NA	NA
WP_002329491.1|1794766_1795063_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	58.0	3.0e-19
>prophage 133
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1804209	1807053	2630073		Staphylococcus_phage(50.0%)	2	NA	NA
WP_002292799.1|1804209_1804674_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	58.5	1.0e-45
WP_002336813.1|1804695_1807053_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	41.9	5.2e-98
>prophage 134
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1813994	1815293	2630073		Streptococcus_phage(100.0%)	1	NA	NA
WP_002292812.1|1813994_1815293_-	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	81.5	3.6e-194
>prophage 135
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1822021	1822948	2630073		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_089030371.1|1822021_1822948_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	27.5	7.7e-13
>prophage 136
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1831008	1832376	2630073		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_002292830.1|1831008_1832376_+	HD domain-containing protein	NA	A0A1B1ISR1	uncultured_Mediterranean_phage	32.7	8.1e-27
>prophage 137
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1852535	1863534	2630073		Staphylococcus_phage(20.0%)	9	NA	NA
WP_002295091.1|1852535_1853435_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.3	2.1e-23
WP_002317903.1|1853579_1855358_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_002290803.1|1855539_1855854_-	thioredoxin	NA	A0A1J0GW78	Streptomyces_phage	40.8	3.6e-15
WP_100970530.1|1855940_1858301_-	endonuclease MutS2	NA	Q94M10	Lactobacillus_phage	50.4	1.7e-24
WP_002295088.1|1858415_1858964_-	CvpA family protein	NA	NA	NA	NA	NA
WP_002295087.1|1859021_1859459_-	cell division protein ZapA	NA	NA	NA	NA	NA
WP_002295084.1|1860954_1861866_-	N-acetylmuramoyl-L-alanine amidase	NA	C8CHK8	Thermus_virus	41.1	5.3e-06
WP_002306167.1|1862267_1862846_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_100970531.1|1862865_1863534_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.9	1.8e-35
>prophage 138
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1887888	1905204	2630073		Mycoplasma_phage(33.33%)	14	NA	NA
WP_002314624.1|1887888_1889823_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	31.5	4.8e-57
WP_002287014.1|1892282_1893413_-	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	A0A218MNE0	uncultured_virus	45.3	6.0e-84
WP_002293464.1|1893972_1895046_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002287036.1|1895042_1895870_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_002287038.1|1895870_1896677_-	ABC transporter permease	NA	Q6GZ02	Mycoplasma_phage	27.6	7.9e-14
WP_002287039.1|1896688_1897774_-	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	45.0	4.0e-37
WP_002287040.1|1897790_1898333_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_100970533.1|1898590_1899580_+	oxidoreductase	NA	NA	NA	NA	NA
WP_100970534.1|1899576_1900314_+	phosphopantothenate--cysteine ligase	NA	NA	NA	NA	NA
WP_002287045.1|1900310_1900862_+	phosphopantothenoylcysteine decarboxylase	NA	A0A1V0S7W6	Shearwaterpox_virus	41.2	3.2e-30
WP_002287046.1|1900877_1901510_+	ECF transporter S component	NA	NA	NA	NA	NA
WP_002319004.1|1901594_1902242_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_002287048.1|1902246_1903230_+	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
WP_086274682.1|1903689_1905204_-	flavocytochrome c	NA	A0A2P0ZL82	Lactobacillus_phage	29.9	1.4e-48
>prophage 139
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1913131	1918452	2630073	tRNA	Cafeteria_roenbergensis_virus(33.33%)	6	NA	NA
WP_002293820.1|1913131_1913884_+	exodeoxyribonuclease III	NA	E3T4M6	Cafeteria_roenbergensis_virus	47.1	1.3e-58
WP_100970536.1|1914503_1915037_+	3'-5' exonuclease	NA	A0A1S5SFA9	Streptococcus_phage	43.4	5.9e-26
WP_100970537.1|1915525_1916050_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002287066.1|1916042_1916516_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_002291445.1|1916638_1917619_-	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_002299915.1|1917771_1918452_-	uracil-DNA glycosylase	NA	A0A0B5IW78	Pandoravirus	43.3	4.3e-45
>prophage 140
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1924139	1924889	2630073		Lactobacillus_phage(100.0%)	1	NA	NA
WP_002299958.1|1924139_1924889_+	nicotinamide mononucleotide transporter	NA	A0A2H4PB74	Lactobacillus_phage	70.3	1.5e-91
>prophage 141
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1929849	1930755	2630073		Staphylococcus_phage(100.0%)	1	NA	NA
WP_100970540.1|1929849_1930755_+	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	39.4	1.2e-37
>prophage 142
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1938612	1941494	2630073		Streptococcus_phage(100.0%)	2	NA	NA
WP_100970542.1|1938612_1940115_-	Lsa family ABC-F type ribosomal protection protein	NA	A0A1B0RXA0	Streptococcus_phage	25.6	9.9e-26
WP_002291594.1|1940372_1941494_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	31.3	5.8e-23
>prophage 143
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1950989	1960383	2630073		Planktothrix_phage(25.0%)	6	NA	NA
WP_002333785.1|1950989_1952063_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	35.5	5.8e-28
WP_002321117.1|1952708_1953380_-	HAD family phosphatase	NA	NA	NA	NA	NA
WP_002304253.1|1953466_1956145_-	magnesium-translocating P-type ATPase	NA	M1HXH2	Paramecium_bursaria_Chlorella_virus	25.6	1.1e-48
WP_002293327.1|1956803_1957241_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	46.2	4.1e-25
WP_002293329.1|1957262_1958129_-	Rgg/GadR/MutR family transcriptional regulator	NA	NA	NA	NA	NA
WP_012197812.1|1958289_1960383_-	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	47.1	5.9e-162
>prophage 144
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1969070	1974540	2630073		Lactobacillus_virus(25.0%)	5	NA	NA
WP_002340345.1|1969070_1969772_-	deoxynucleoside kinase	NA	C1KFI3	Lactobacillus_virus	48.6	4.6e-50
WP_002293607.1|1969787_1970228_-	nucleoside deoxyribosyltransferase	NA	A0A2P0ZL88	Lactobacillus_phage	50.7	8.9e-36
WP_002293608.1|1970227_1970803_-	TIGR00730 family Rossman fold protein	NA	A0A1D3SNB7	Enterococcus_phage	44.9	1.5e-35
WP_002346739.1|1972288_1972990_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002313403.1|1973097_1974540_-	glycoside hydrolase family 1 protein	NA	A0A0B5JD41	Pandoravirus	27.4	2.1e-33
>prophage 145
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	1989735	1993205	2630073		Brazilian_cedratvirus(50.0%)	2	NA	NA
WP_002291166.1|1989735_1990374_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	28.8	5.9e-12
WP_002291169.1|1992539_1993205_+	helix-turn-helix domain-containing protein	NA	A0A2I7SCV6	Paenibacillus_phage	47.1	2.2e-06
>prophage 146
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2003753	2004926	2630073	transposase	Staphylococcus_phage(100.0%)	1	NA	NA
WP_002323245.1|2003753_2004926_-|transposase	IS256-like element IS1542 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	88.8	1.3e-121
>prophage 147
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2008137	2009457	2630073	transposase	Streptococcus_phage(100.0%)	1	NA	NA
WP_002338419.1|2008137_2009457_+|transposase	IS1380-like element ISSsu5 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	100.0	1.3e-252
>prophage 148
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2018817	2019465	2630073		Cyanophage(100.0%)	1	NA	NA
WP_002380569.1|2018817_2019465_-	fructose-6-phosphate aldolase	NA	A0A0C5AMY8	Cyanophage	44.7	1.1e-47
>prophage 149
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2026786	2027932	2630073		Oenococcus_phage(100.0%)	1	NA	NA
WP_002362832.1|2026786_2027932_-	galactonate dehydratase	NA	Q6A202	Oenococcus_phage	33.7	1.6e-52
>prophage 150
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2033817	2039242	2630073		Staphylococcus_phage(66.67%)	5	NA	NA
WP_002392002.1|2033817_2034036_-	hypothetical protein	NA	A0A2H4PQP5	Staphylococcus_phage	53.1	1.1e-07
WP_078131146.1|2034028_2035621_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	51.1	2.3e-126
WP_049060439.1|2036131_2036914_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002298387.1|2036978_2037815_-	PRD domain-containing protein	NA	NA	NA	NA	NA
WP_002298389.1|2037832_2039242_-	glycoside hydrolase family 1 protein	NA	A0A0B5JD41	Pandoravirus	27.6	3.2e-42
>prophage 151
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2042692	2050297	2630073	integrase	Bacillus_phage(50.0%)	7	2035883:2035897	2049748:2049762
2035883:2035897	attL	AGTAGTATAAAATAT	NA	NA	NA	NA
WP_002298398.1|2042692_2042908_-	helix-turn-helix transcriptional regulator	NA	A0A139ZPI6	Marinitoga_camini_virus	41.8	6.1e-06
WP_002301912.1|2043035_2043371_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002298401.1|2043446_2045444_-	hypothetical protein	NA	A0A1Z1LZK7	Bacillus_phage	24.1	2.7e-23
WP_002287723.1|2045541_2045817_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002287709.1|2046048_2046783_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002287705.1|2046821_2047964_+|integrase	site-specific integrase	integrase	A0A1S5S7K9	Streptococcus_phage	34.8	3.3e-58
WP_100970552.1|2048482_2050297_-	ATP-dependent helicase	NA	A7KV33	Bacillus_phage	27.0	6.3e-43
2049748:2049762	attR	AGTAGTATAAAATAT	NA	NA	NA	NA
>prophage 152
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2060387	2073155	2630073	integrase	Streptococcus_phage(33.33%)	14	2059511:2059527	2070307:2070323
2059511:2059527	attL	TCCAAAAATTTTCTTTT	NA	NA	NA	NA
WP_025480856.1|2060387_2061263_-	hypothetical protein	NA	M4ZS60	Bacillus_phage	38.3	5.6e-13
WP_002313373.1|2061532_2061835_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010778236.1|2062036_2062834_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002337874.1|2062884_2064027_+|integrase	site-specific integrase	integrase	A0A1S5S7K9	Streptococcus_phage	36.3	3.6e-60
WP_002287686.1|2064124_2065516_-	Fe-S cluster assembly protein SufB	NA	NA	NA	NA	NA
WP_002287684.1|2065520_2065991_-	SUF system NifU family Fe-S cluster assembly protein	NA	NA	NA	NA	NA
WP_002298402.1|2065977_2067213_-	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	48.0	3.5e-114
WP_002287681.1|2067209_2068496_-	Fe-S cluster assembly protein SufD	NA	NA	NA	NA	NA
WP_002287679.1|2068508_2069282_-	Fe-S cluster assembly ATPase SufC	NA	A0A2R8FG22	Brazilian_cedratvirus	28.8	2.1e-08
WP_002287678.1|2069478_2070327_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
2070307:2070323	attR	TCCAAAAATTTTCTTTT	NA	NA	NA	NA
WP_002287674.1|2070350_2071037_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_002304234.1|2071029_2072064_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	35.1	4.2e-28
WP_002291179.1|2072458_2072797_-	glycine cleavage system protein H	NA	NA	NA	NA	NA
WP_002295166.1|2072798_2073155_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	42.3	2.7e-22
>prophage 153
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2078187	2079845	2630073		Acanthamoeba_polyphaga_mimivirus(50.0%)	2	NA	NA
WP_002298278.1|2078187_2078652_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	A0A0G2Y1B6	Acanthamoeba_polyphaga_mimivirus	38.7	1.5e-17
WP_100970560.1|2078897_2079845_+	glycosyltransferase family 2 protein	NA	V5USA4	Oenococcus_phage	50.7	6.5e-84
>prophage 154
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2088952	2097018	2630073		Enterococcus_phage(25.0%)	7	NA	NA
WP_002291205.1|2088952_2089552_+	metallophosphatase	NA	A0A288TXW7	Enterococcus_phage	40.0	5.6e-33
WP_002291207.1|2089689_2090976_-	multidrug efflux MFS transporter EfmA	NA	A0A1B0RXG2	Streptococcus_phage	36.7	4.0e-68
WP_002286736.1|2091246_2091591_-	DUF1831 domain-containing protein	NA	NA	NA	NA	NA
WP_002323744.1|2091727_2092864_-	cysteine desulfurase	NA	NA	NA	NA	NA
WP_002286741.1|2093051_2094026_-	ribose-phosphate diphosphokinase	NA	A0A1V0SHF7	Hokovirus	32.2	2.0e-40
WP_002286745.1|2094105_2094981_-	dihydrolipoamide dehydrogenase	NA	NA	NA	NA	NA
WP_002301660.1|2095110_2097018_+	peptidase M13	NA	E3T4I7	Cafeteria_roenbergensis_virus	31.1	6.1e-81
>prophage 155
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2100985	2105324	2630073		Bacillus_virus(50.0%)	6	NA	NA
WP_002298881.1|2100985_2101531_-	cysteine hydrolase	NA	G3MA16	Bacillus_virus	37.4	1.3e-23
WP_002291218.1|2101542_2102235_-	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA	NA	NA	NA	NA
WP_002286760.1|2102253_2102538_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002323741.1|2102550_2103114_-	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_002286764.1|2103341_2104004_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002286766.1|2104127_2105324_+	toxic anion resistance protein	NA	A0A2K9VCT6	Lactobacillus_phage	29.1	3.9e-33
>prophage 156
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2116496	2123726	2630073	transposase	Paenibacillus_phage(25.0%)	8	NA	NA
WP_098188817.1|2116496_2117658_+|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	50.9	4.6e-79
WP_002302307.1|2118631_2118973_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A1S5SEX8	Streptococcus_phage	43.5	2.9e-18
WP_002323011.1|2118972_2119203_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100970561.1|2119490_2119829_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002302305.1|2120033_2120609_-	DUF159 family protein	NA	A0A1P8CX02	Bacillus_phage	32.3	1.0e-07
WP_002300332.1|2120972_2121554_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002300333.1|2121746_2122373_-	cysteine hydrolase	NA	NA	NA	NA	NA
WP_002300334.1|2122394_2123726_-	FAD-containing oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	57.6	1.8e-140
>prophage 157
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2132015	2132624	2630073		Enterococcus_phage(100.0%)	1	NA	NA
WP_002297905.1|2132015_2132624_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A249XZV3	Enterococcus_phage	54.1	6.1e-35
>prophage 158
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2136857	2137604	2630073		Staphylococcus_phage(100.0%)	1	NA	NA
WP_002293686.1|2136857_2137604_-	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	25.2	7.3e-14
>prophage 159
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2146142	2147525	2630073		Streptococcus_phage(100.0%)	1	NA	NA
WP_002323727.1|2146142_2147525_+	Y-family DNA polymerase	NA	M1Q231	Streptococcus_phage	40.2	1.8e-90
>prophage 160
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2162020	2165354	2630073		Lactococcus_phage(50.0%)	4	NA	NA
WP_100970562.1|2162020_2162938_+	cysteine synthase family protein	NA	A0A1W6JHY1	Lactococcus_phage	40.9	6.1e-63
WP_100970563.1|2162950_2164096_+	cystathionine gamma-synthase	NA	NA	NA	NA	NA
WP_002289439.1|2164266_2164725_+	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
WP_002289440.1|2164883_2165354_+	glutathione peroxidase	NA	A0A1S7DM81	Molluscum_contagiosum_virus	26.8	2.7e-06
>prophage 161
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2172233	2176121	2630073		Bacillus_virus(50.0%)	3	NA	NA
WP_002317494.1|2172233_2174420_-	ATP-dependent helicase	NA	G3MA40	Bacillus_virus	26.4	2.3e-39
WP_002286265.1|2174637_2175321_+	DUF1275 domain-containing protein	NA	NA	NA	NA	NA
WP_002321450.1|2175401_2176121_-	deoxynucleoside kinase	NA	C1KFI3	Lactobacillus_virus	47.7	1.8e-49
>prophage 162
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2187619	2188321	2630073		Planktothrix_phage(100.0%)	1	NA	NA
WP_002296067.1|2187619_2188321_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	1.6e-34
>prophage 163
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2193383	2195528	2630073		Clostridium_phage(100.0%)	1	NA	NA
WP_100970566.1|2193383_2195528_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A0A8WF62	Clostridium_phage	44.7	7.5e-19
>prophage 164
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2198712	2199465	2630073		Planktothrix_phage(100.0%)	1	NA	NA
WP_002286304.1|2198712_2199465_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.6	4.9e-34
>prophage 165
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2205480	2209673	2630073		Bacillus_phage(66.67%)	3	NA	NA
WP_002294614.1|2205480_2206524_-	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	41.1	1.3e-53
WP_002297412.1|2206526_2207195_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	44.5	5.3e-48
WP_049060593.1|2207336_2209673_+	ABC transporter ATP-binding protein/permease	NA	G9BWD6	Planktothrix_phage	38.4	3.1e-34
>prophage 166
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2223280	2228658	2630073		Vibrio_phage(50.0%)	3	NA	NA
WP_002286368.1|2223280_2225446_-	PTS transporter subunit EIIC	NA	A0A2I7SAJ6	Vibrio_phage	32.7	1.9e-06
WP_002286373.1|2225705_2228000_+	glycoside hydrolase family 65 protein	NA	NA	NA	NA	NA
WP_100970569.1|2227992_2228658_+	beta-phosphoglucomutase	NA	M1H9H9	Acanthocystis_turfacea_Chlorella_virus	27.9	3.6e-12
>prophage 167
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2236290	2241231	2630073	tRNA	Pectobacterium_phage(50.0%)	4	NA	NA
WP_002297419.1|2236290_2237547_-|tRNA	tyrosine--tRNA ligase	tRNA	A0A1L2CUL7	Pectobacterium_phage	42.7	3.1e-81
WP_002296829.1|2238126_2239428_+	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_002294634.1|2239496_2240096_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002294635.1|2240349_2241231_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	31.4	3.3e-21
>prophage 168
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2252548	2257737	2630073		Ostreococcus_tauri_virus(33.33%)	6	NA	NA
WP_002294651.1|2252548_2252863_-	rhodanese-like domain-containing protein	NA	E4WM79	Ostreococcus_tauri_virus	39.1	3.4e-05
WP_002294653.1|2253032_2253293_+	metal-sensitive transcriptional regulator	NA	NA	NA	NA	NA
WP_002321527.1|2253306_2253621_+	sulfur reduction protein DsrE	NA	NA	NA	NA	NA
WP_002294657.1|2254106_2254661_-	CDP-alcohol phosphatidyltransferase family protein	NA	NA	NA	NA	NA
WP_002294659.1|2254786_2256715_-	mannonate oxidoreductase	NA	F2Y0V3	Organic_Lake_phycodnavirus	27.3	7.2e-21
WP_002292560.1|2257020_2257737_-	aquaporin family protein	NA	M1HVL5	Acanthocystis_turfacea_Chlorella_virus	36.9	1.6e-29
>prophage 169
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2272432	2277508	2630073		Pandoravirus(50.0%)	3	NA	NA
WP_002298167.1|2272432_2273929_-	glycoside hydrolase family 1 protein	NA	A0A0B5JD41	Pandoravirus	22.4	3.4e-26
WP_002294685.1|2274122_2275745_-	alpha-glucosidase	NA	NA	NA	NA	NA
WP_002301172.1|2276194_2277508_-	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	32.1	2.6e-46
>prophage 170
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2301839	2302973	2630073		Synechococcus_phage(100.0%)	1	NA	NA
WP_002299903.1|2301839_2302973_+	alcohol dehydrogenase catalytic domain-containing protein	NA	E3SJ82	Synechococcus_phage	24.8	1.5e-13
>prophage 171
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2314934	2373013	2630073	transposase,tRNA	Staphylococcus_phage(26.67%)	49	NA	NA
WP_002323245.1|2314934_2316107_+|transposase	IS256-like element IS1542 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	88.8	1.3e-121
WP_002297448.1|2316257_2317895_+	membrane protein	NA	NA	NA	NA	NA
WP_002294728.1|2318039_2318780_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_002294730.1|2318971_2319607_-	DUF998 domain-containing protein	NA	NA	NA	NA	NA
WP_002297446.1|2319753_2320995_-	serine/threonine transporter SstT	NA	NA	NA	NA	NA
WP_100970612.1|2322203_2324222_+	alkaline phosphatase family protein	NA	NA	NA	NA	NA
WP_100970580.1|2324281_2324986_-	DUF4767 domain-containing protein	NA	NA	NA	NA	NA
WP_002298699.1|2325227_2325770_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_002294740.1|2325774_2326002_-	copper chaperone	NA	NA	NA	NA	NA
WP_002298700.1|2326080_2327961_-	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	34.2	9.9e-100
WP_002324335.1|2328150_2328765_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_100970581.1|2330013_2331666_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002312639.1|2332103_2332973_-	ROK family protein	NA	NA	NA	NA	NA
WP_002317128.1|2332992_2334114_-	DUF2961 domain-containing protein	NA	NA	NA	NA	NA
WP_002312636.1|2334115_2334511_-	PTS fructose transporter subunit IIA	NA	NA	NA	NA	NA
WP_002349742.1|2334529_2335336_-	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA	NA
WP_002312633.1|2335328_2336117_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_002312631.1|2336130_2336607_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_002323457.1|2336678_2339336_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_002317125.1|2339354_2339759_-	restriction endonuclease subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	41.4	4.7e-15
WP_002313258.1|2339990_2340248_-	GTP pyrophosphokinase	NA	NA	NA	NA	NA
WP_002324517.1|2340372_2340705_-	hypothetical protein	NA	NA	NA	NA	NA
WP_098188817.1|2341237_2342400_-|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	50.9	4.6e-79
WP_010706118.1|2342468_2342675_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100970582.1|2342837_2344475_-	recombinase family protein	NA	A0A2P1JU08	Anoxybacillus_phage	27.9	9.0e-41
WP_002351308.1|2344478_2345852_-	recombinase family protein	NA	A0A2P1JU08	Anoxybacillus_phage	23.6	9.3e-15
WP_043951862.1|2345868_2346108_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100970583.1|2346539_2347955_-	peptidase	NA	A0A1B2AQ05	Phage_Wrath	23.7	1.1e-21
WP_043951863.1|2347947_2348319_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000997695.1|2348878_2350057_+|transposase	IS256-like element ISEf1 family transposase	transposase	NA	NA	NA	NA
WP_002287844.1|2351048_2351741_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002351288.1|2352045_2353215_-|transposase	IS256 family transposase	transposase	NA	NA	NA	NA
WP_002299296.1|2353285_2353837_-	PD-(D/E)XK nuclease family protein	NA	NA	NA	NA	NA
WP_100970584.1|2354291_2355089_+	MvaI/BcnI restriction endonuclease family protein	NA	NA	NA	NA	NA
WP_100970613.1|2355106_2355895_-	site-specific DNA-methyltransferase	NA	A0A0N9PB81	Sulfolobus_monocaudavirus	46.8	1.8e-15
WP_100970585.1|2355997_2356894_-	site-specific DNA-methyltransferase	NA	M1PWW9	Cyanophage	37.6	9.6e-45
WP_100970586.1|2357086_2358724_-	recombinase family protein	NA	A0A2P1JU08	Anoxybacillus_phage	27.9	9.0e-41
WP_100970587.1|2358727_2360101_-	recombinase family protein	NA	A0A2P1JU08	Anoxybacillus_phage	24.1	1.9e-15
WP_002334089.1|2360116_2360356_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100970588.1|2360537_2363213_-	DUF927 domain-containing protein	NA	A0A2H4J8K1	uncultured_Caudovirales_phage	28.0	2.5e-24
WP_002323245.1|2364060_2365233_-|transposase	IS256-like element IS1542 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	88.8	1.3e-121
WP_100970589.1|2366171_2367176_-	DUF4767 domain-containing protein	NA	NA	NA	NA	NA
WP_002304106.1|2367250_2367547_-	peptidase	NA	NA	NA	NA	NA
WP_002328685.1|2367539_2367833_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002322883.1|2367978_2368530_-	DUF1643 domain-containing protein	NA	NA	NA	NA	NA
WP_100970590.1|2368703_2369003_-	4'-phosphopantetheinyl transferase	NA	NA	NA	NA	NA
WP_002317115.1|2369029_2369338_-	DUF960 domain-containing protein	NA	NA	NA	NA	NA
WP_002323245.1|2369552_2370725_-|transposase	IS256-like element IS1542 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	88.8	1.3e-121
WP_000868795.1|2372515_2373013_+	trimethoprim-resistant dihydrofolate reductase DfrG	NA	G3MBI7	Bacillus_virus	49.1	4.0e-40
>prophage 172
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2378790	2380077	2630073		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_002325236.1|2378790_2380077_+	PDZ domain-containing protein	NA	A0A1B1IT49	uncultured_Mediterranean_phage	30.2	5.7e-22
>prophage 173
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2389243	2389990	2630073	transposase	Bacillus_phage(100.0%)	1	NA	NA
WP_061573546.1|2389243_2389990_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	42.1	2.3e-44
>prophage 174
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2395864	2398986	2630073		Agrobacterium_phage(50.0%)	4	NA	NA
WP_002293357.1|2395864_2396389_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	33.3	1.4e-14
WP_100970593.1|2396708_2397341_+	pentapeptide repeat-containing protein	NA	NA	NA	NA	NA
WP_002294163.1|2397342_2398248_-	magnesium transporter CorA family protein	NA	NA	NA	NA	NA
WP_002317095.1|2398332_2398986_-	deoxynucleoside kinase	NA	C1KFI3	Lactobacillus_virus	52.3	5.0e-59
>prophage 175
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2423673	2431560	2630073	tRNA,holin	uncultured_Mediterranean_phage(33.33%)	5	NA	NA
WP_002294183.1|2423673_2424819_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	40.9	2.5e-82
WP_010777016.1|2425036_2425735_+	DUF975 family protein	NA	NA	NA	NA	NA
WP_002289743.1|2425902_2428542_-	cation-translocating P-type ATPase	NA	A0A1J0FA34	Only_Syngen_Nebraska_virus	31.2	1.6e-84
WP_002296565.1|2429160_2430192_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_002294192.1|2430384_2431560_+|holin	betaine/proline/choline family ABC transporter ATP-binding protein	holin	Q6GZ03	Mycoplasma_phage	32.9	1.0e-17
>prophage 176
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2453592	2457100	2630073		Lactobacillus_phage(50.0%)	4	NA	NA
WP_002289874.1|2453592_2453955_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A291I9M9	Lactobacillus_phage	37.8	7.6e-09
WP_002294207.1|2453965_2455087_-	alanine racemase	NA	NA	NA	NA	NA
WP_002296554.1|2455102_2455453_-	holo-ACP synthase	NA	NA	NA	NA	NA
WP_086272912.1|2455582_2457100_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	36.2	1.3e-62
>prophage 177
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2460192	2466578	2630073		Ostreococcus_lucimarinus_virus(33.33%)	6	NA	NA
WP_002317554.1|2460192_2461938_+	AarF/ABC1/UbiB kinase family protein	NA	M4R0M8	Ostreococcus_lucimarinus_virus	28.1	1.3e-40
WP_100970597.1|2462186_2462654_-	YaiI/YqxD family protein	NA	NA	NA	NA	NA
WP_002294217.1|2462637_2464011_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002296548.1|2464332_2464821_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002294220.1|2464842_2465445_-	TVP38/TMEM64 family protein	NA	M1Q152	Streptococcus_phage	30.6	3.6e-19
WP_002289751.1|2465948_2466578_-	uridine kinase	NA	A0A1V0SAA3	Catovirus	40.2	3.1e-34
>prophage 178
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2473008	2475000	2630073		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
WP_002289279.1|2473008_2475000_-	potassium transporter Kup	NA	M1HZV6	Acanthocystis_turfacea_Chlorella_virus	33.9	8.4e-65
>prophage 179
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2478753	2479317	2630073		Synechococcus_phage(100.0%)	1	NA	NA
WP_002289284.1|2478753_2479317_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	37.1	2.3e-12
>prophage 180
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2484298	2485039	2630073		Planktothrix_phage(100.0%)	1	NA	NA
WP_002294240.1|2484298_2485039_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	5.5e-30
>prophage 181
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2491204	2501792	2630073		Bacillus_phage(25.0%)	8	NA	NA
WP_002289812.1|2491204_2492206_-	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.8	2.3e-07
WP_002290528.1|2492218_2492821_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_002294252.1|2492990_2493437_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_002294254.1|2493513_2494227_-	trehalose operon repressor	NA	A0A291LID1	Streptomyces_phage	39.7	1.2e-05
WP_002297133.1|2494449_2496438_+	PTS system trehalose-specific EIIBC component	NA	NA	NA	NA	NA
WP_002294256.1|2496522_2497083_-	septum formation inhibitor Maf	NA	NA	NA	NA	NA
WP_100970599.1|2497104_2499129_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	30.5	1.2e-63
WP_002297135.1|2499146_2501792_-	DNA mismatch repair protein MutS	NA	A0A1V0SC35	Catovirus	26.1	3.6e-39
>prophage 182
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2507300	2509170	2630073		Pneumococcus_phage(33.33%)	3	NA	NA
WP_002294268.1|2507300_2507810_-	QueT transporter family protein	NA	E7DN70	Pneumococcus_phage	31.8	7.5e-10
WP_002297929.1|2508190_2508952_-	3-oxoacyl-ACP reductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	31.7	1.2e-16
WP_002290506.1|2508948_2509170_-	DUF2829 domain-containing protein	NA	A0A0S2MV93	Bacillus_phage	33.3	1.1e-05
>prophage 183
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2512203	2512938	2630073		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_002290500.1|2512203_2512938_+	aquaporin family protein	NA	M1HWZ0	Paramecium_bursaria_Chlorella_virus	31.4	1.4e-25
>prophage 184
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2524192	2526847	2630073		Brazilian_cedratvirus(50.0%)	3	NA	NA
WP_002297790.1|2524192_2524948_-	ATP-binding cassette domain-containing protein	NA	A0A2R8FG22	Brazilian_cedratvirus	28.1	2.2e-13
WP_002297789.1|2524944_2525904_-	iron chelate uptake ABC transporter family permease subunit	NA	NA	NA	NA	NA
WP_100970601.1|2525896_2526847_-	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4IY97	uncultured_Caudovirales_phage	40.5	9.5e-67
>prophage 185
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2535420	2536107	2630073		Megavirus(100.0%)	1	NA	NA
WP_002287896.1|2535420_2536107_-	ribonuclease III	NA	K7YH73	Megavirus	32.3	9.1e-27
>prophage 186
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2540164	2545833	2630073		Bacillus_virus(33.33%)	5	NA	NA
WP_002297777.1|2540164_2541109_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.1	3.9e-20
WP_002287889.1|2541109_2542114_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.2	5.1e-18
WP_002294295.1|2542382_2542625_-	acyl carrier protein	NA	NA	NA	NA	NA
WP_002289721.1|2542746_2543748_-	phosphate acyltransferase PlsX	NA	NA	NA	NA	NA
WP_002294296.1|2543796_2545833_-	ATP-dependent DNA helicase RecG	NA	A0A2H4JBQ0	uncultured_Caudovirales_phage	23.1	3.1e-06
>prophage 187
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2557519	2559204	2630073		Staphylococcus_phage(50.0%)	2	NA	NA
WP_002298564.1|2557519_2558389_-	energy-coupling factor ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.8	5.0e-14
WP_002288720.1|2558364_2559204_-	energy-coupling factor ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.3	1.3e-19
>prophage 188
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2573977	2582899	2630073		Klosneuvirus(25.0%)	9	NA	NA
WP_002290442.1|2573977_2575165_-	elongation factor Tu	NA	A0A1V0SLW6	Klosneuvirus	24.4	6.4e-12
WP_002294317.1|2575336_2577424_-	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	28.9	2.6e-64
WP_002290440.1|2577517_2577988_-	30S ribosomal protein S7	NA	NA	NA	NA	NA
WP_002294318.1|2578071_2578485_-	30S ribosomal protein S12	NA	NA	NA	NA	NA
WP_002294319.1|2578803_2579487_+	ribose-5-phosphate isomerase RpiA	NA	NA	NA	NA	NA
WP_002294320.1|2579619_2580201_+	recombinase family protein	NA	A0A219Y9V9	Aeromonas_phage	34.6	2.2e-18
WP_002294321.1|2580372_2581059_+	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA	NA
WP_002289197.1|2581356_2582064_-	purine-nucleoside phosphorylase	NA	NA	NA	NA	NA
WP_002289198.1|2582080_2582899_-	purine-nucleoside phosphorylase	NA	Q5YBA4	Grouper_iridovirus	45.8	6.9e-58
>prophage 189
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2586269	2591620	2630073		Staphylococcus_phage(33.33%)	5	NA	NA
WP_002289202.1|2586269_2587832_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	32.4	1.7e-20
WP_002289203.1|2588043_2589126_-	BMP family ABC transporter substrate-binding protein	NA	A0A0A7DN02	Lactobacillus_phage	41.5	9.2e-58
WP_002298572.1|2589191_2589590_-	cytidine deaminase	NA	NA	NA	NA	NA
WP_002289206.1|2589610_2590273_-	deoxyribose-phosphate aldolase	NA	NA	NA	NA	NA
WP_098188864.1|2590318_2591620_-	pyrimidine-nucleoside phosphorylase	NA	A0A0H3UZD4	Geobacillus_virus	58.0	2.0e-123
>prophage 190
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2594871	2596437	2630073		Hokovirus(100.0%)	1	NA	NA
WP_002298578.1|2594871_2596437_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	30.6	3.5e-18
>prophage 191
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2600600	2605849	2630073	transposase	Pandoravirus(50.0%)	5	NA	NA
WP_002297376.1|2600600_2602001_-	6-phospho-beta-galactosidase	NA	A0A0B5JD41	Pandoravirus	30.5	1.0e-45
WP_002288637.1|2602237_2603023_+	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA	NA
WP_002288638.1|2603025_2603718_+	HAD family phosphatase	NA	NA	NA	NA	NA
WP_002288640.1|2603991_2604363_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002323245.1|2604676_2605849_-|transposase	IS256-like element IS1542 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	88.8	1.3e-121
>prophage 192
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2617111	2623707	2630073		Tupanvirus(25.0%)	4	NA	NA
WP_002297801.1|2617111_2618734_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	26.5	1.5e-48
WP_002297799.1|2618862_2619726_-	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	29.9	8.8e-11
WP_002288375.1|2620266_2621559_-	adenylosuccinate synthase	NA	G5CQQ4	Megavirus	36.0	8.1e-69
WP_002288373.1|2622339_2623707_-	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	54.8	3.0e-130
>prophage 193
NZ_CP025077	Enterococcus faecium strain LS170308 chromosome, complete genome	2630073	2626816	2627329	2630073		Temperate_phage(100.0%)	1	NA	NA
WP_002299768.1|2626816_2627329_-	single-stranded DNA-binding protein	NA	Q938M7	Temperate_phage	60.0	1.3e-46
>prophage 1
NZ_CP025078	Enterococcus faecium strain LS170308 plasmid unnamed, complete sequence	56373	1046	20079	56373	transposase	Streptococcus_phage(76.92%)	19	NA	NA
WP_002294513.1|1046_2531_+	ABC-F type ribosomal protection protein Lsa(E)	NA	A0A2H4UUX5	Bodo_saltans_virus	26.0	2.6e-26
WP_002294514.1|2584_3388_+	lincosamide nucleotidyltransferase Lnu(B)	NA	NA	NA	NA	NA
WP_002303393.1|5039_5264_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002303392.1|5278_6148_+	hypothetical protein	NA	A0A1X9I6C9	Streptococcus_phage	90.3	5.7e-151
WP_000662263.1|6128_6863_+	class I SAM-dependent methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	100.0	1.5e-141
WP_002294505.1|6895_7759_+	aminoglycoside nucleotidyltransferase ANT(6)-Ia	NA	A0A1X9I6F2	Streptococcus_phage	100.0	8.7e-168
WP_002294507.1|7802_8330_+	adenine phosphoribosyltransferase	NA	A0A1X9I6E2	Streptococcus_phage	100.0	1.9e-93
WP_002338419.1|8557_9877_+|transposase	IS1380-like element ISSsu5 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	100.0	1.3e-252
WP_010725963.1|11657_12554_+	ParA family protein	NA	A0A1X9I765	Streptococcus_phage	99.6	1.1e-154
WP_001835296.1|12617_12833_+	peptide-binding protein	NA	A0A1X9I6D5	Streptococcus_phage	97.1	4.2e-31
WP_000301765.1|12849_13122_+	antitoxin	NA	A0A1X9I6E5	Streptococcus_phage	100.0	5.0e-05
WP_024417198.1|13123_13987_+	toxin zeta	NA	NA	NA	NA	NA
WP_096710545.1|14108_14606_+	molecular chaperone DnaJ	NA	A0A0S2MWN4	Cellulophaga_phage	30.8	4.4e-07
WP_002326773.1|14690_15287_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_098379806.1|15597_16479_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	2.3e-22
WP_098379807.1|16502_18116_+	tetronasin resistance protein	NA	NA	NA	NA	NA
WP_098379808.1|18962_19079_+	zeta-toxin	NA	NA	NA	NA	NA
WP_023843711.1|19256_19397_-	hypothetical protein	NA	E4ZFP9	Streptococcus_phage	93.0	8.0e-15
WP_002292226.1|19341_20079_-	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NA	E4ZFQ0	Streptococcus_phage	99.6	1.4e-134
>prophage 2
NZ_CP025078	Enterococcus faecium strain LS170308 plasmid unnamed, complete sequence	56373	24993	34752	56373	transposase	Streptococcus_phage(57.14%)	10	NA	NA
WP_000429439.1|24993_25947_+	ParA family protein	NA	F0PIG8	Enterococcus_phage	26.1	7.7e-16
WP_001196543.1|25918_26194_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002354485.1|26415_27102_+|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	99.6	2.0e-127
WP_000222577.1|27229_28189_+|transposase	IS30-like element IS1252 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.1	2.4e-33
WP_000170424.1|28621_29194_-	recombinase family protein	NA	A0A1J1J8Z4	Escherichia_phage	46.0	6.8e-36
WP_000599739.1|29209_29815_-	cell filamentation protein	NA	NA	NA	NA	NA
WP_002354485.1|30058_30745_-|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	99.6	2.0e-127
WP_001224319.1|31523_32456_+	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	100.0	1.1e-171
WP_011058339.1|32730_32817_+	tetracycline resistance determinant leader peptide	NA	NA	NA	NA	NA
WP_001574275.1|32832_34752_+	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	95.0	0.0e+00
