assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002831665.1_ASM283166v1	NZ_CP025118	Lacinutrix sp. Bg11-31 chromosome, complete genome	1	1437417-1437511	1	CRISPRCasFinder	no	WYL,RT	RT,DEDDh,cas3,WYL,cas1,cas2,cas9	Unclear	ATGAGATTGCTTCGTTCCTCGCAATGAC	28	0	0	NA	NA	NA	1	1	Orphan	RT,DEDDh,cas3,WYL,cas1,cas2,cas9	NA|448aa|up_9|NZ_CP025118.1_1418817_1420161_-,NA|128aa|up_6|NZ_CP025118.1_1426638_1427022_-,NA|255aa|up_5|NZ_CP025118.1_1427528_1428293_-,NA|120aa|up_4|NZ_CP025118.1_1428461_1428821_-,NA|202aa|down_6|NZ_CP025118.1_1446987_1447593_-,NA|95aa|down_8|NZ_CP025118.1_1448641_1448926_-,NA|106aa|down_9|NZ_CP025118.1_1449056_1449374_-	NA|448aa|up_9|NZ_CP025118.1_1418817_1420161_-	NA	NA|1048aa|up_8|NZ_CP025118.1_1420231_1423375_-	pfam02836, Glyco_hydro_2_C, Glycosyl hydrolases family 2, TIM barrel domain	NA|937aa|up_7|NZ_CP025118.1_1423660_1426471_-	pfam00196, GerE, Bacterial regulatory proteins, luxR family	NA|128aa|up_6|NZ_CP025118.1_1426638_1427022_-	NA	NA|255aa|up_5|NZ_CP025118.1_1427528_1428293_-	NA	NA|120aa|up_4|NZ_CP025118.1_1428461_1428821_-	NA	NA|654aa|up_3|NZ_CP025118.1_1428828_1430790_-	pfam11074, DUF2779, Domain of unknown function(DUF2779)	NA|96aa|up_2|NZ_CP025118.1_1430999_1431287_-	cd10448, GIY-YIG_unchar_3, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria	NA|957aa|up_1|NZ_CP025118.1_1431465_1434336_-	COG0610, COG0610, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms]	NA|513aa|up_0|NZ_CP025118.1_1434328_1435867_-	pfam02661, Fic, Fic/DOC family	NA|559aa|down_0|NZ_CP025118.1_1437554_1439231_-	TIGR00497, hsdM, type I restriction system adenine methylase (hsdM)	NA|376aa|down_1|NZ_CP025118.1_1439484_1440612_-	COG3177, COG3177, Fic family protein [Function unknown]	NA|995aa|down_2|NZ_CP025118.1_1440985_1443970_-	COG0587, DnaE, DNA polymerase III, alpha subunit [DNA replication, recombination, and repair]	NA|405aa|down_3|NZ_CP025118.1_1443969_1445184_-	cd03586, PolY_Pol_IV_kappa, DNA Polymerase IV/Kappa	NA|258aa|down_4|NZ_CP025118.1_1445236_1446010_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	WYL|302aa|down_5|NZ_CP025118.1_1446072_1446978_-	pfam13280, WYL, WYL domain	NA|202aa|down_6|NZ_CP025118.1_1446987_1447593_-	NA	NA|320aa|down_7|NZ_CP025118.1_1447609_1448569_-	pfam14281, PDDEXK_4, PD-(D/E)XK nuclease superfamily	NA|95aa|down_8|NZ_CP025118.1_1448641_1448926_-	NA	NA|106aa|down_9|NZ_CP025118.1_1449056_1449374_-	NA
GCF_002831665.1_ASM283166v1	NZ_CP025118	Lacinutrix sp. Bg11-31 chromosome, complete genome	2	1934453-1938308	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas1,cas2,cas9	RT,DEDDh,cas3,WYL,cas1,cas2,cas9	Type II-C,Type II-B, or Type II-C?,Type II-A, Type II-B	AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC,AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC,AATATCGTGTTTTCTAATCTTTAATCAAACCACAAC	36,36,36	0	0	NA	NA	NA:NA:NA	58,58,56	58	TypeII-C,TypeII-B,TypeII-A,TypeII-B,orTypeII-C?	RT,DEDDh,cas3,WYL,cas1,cas2,cas9	NA|692aa|up_8|NZ_CP025118.1_1925536_1927612_-,NA|238aa|down_8|NZ_CP025118.1_1952950_1953664_-	NA|341aa|up_9|NZ_CP025118.1_1924439_1925462_+	cd07818, SRPBCC_1, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins	NA|692aa|up_8|NZ_CP025118.1_1925536_1927612_-	NA	NA|124aa|up_7|NZ_CP025118.1_1927834_1928206_+	COG0239, CrcB, Integral membrane protein possibly involved in chromosome condensation [Cell division and chromosome partitioning]	NA|202aa|up_6|NZ_CP025118.1_1928202_1928808_-	pfam07920, DUF1684, Protein of unknown function (DUF1684)	NA|181aa|up_5|NZ_CP025118.1_1928830_1929373_-	pfam14060, DUF4252, Domain of unknown function (DUF4252)	NA|402aa|up_4|NZ_CP025118.1_1929648_1930854_+	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|157aa|up_3|NZ_CP025118.1_1931298_1931769_-	pfam08808, RES, RES domain	NA|168aa|up_2|NZ_CP025118.1_1931772_1932276_-	TIGR02293, conserved_protein_of_unknown_function, putative toxin-antitoxin system antitoxin component, TIGR02293 family	cas1|294aa|up_1|NZ_CP025118.1_1933144_1934026_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|110aa|up_0|NZ_CP025118.1_1934016_1934346_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas9|1435aa|down_0|NZ_CP025118.1_1938662_1942967_-	cd09643, Csn1, CRISPR/Cas system-associated protein Cas9	NA|158aa|down_1|NZ_CP025118.1_1943176_1943650_-	COG1764, osmC, Organic hydroperoxide reductase [Secondary metabolites biosynthesis, transport and catabolism]	NA|1146aa|down_2|NZ_CP025118.1_1943952_1947390_-	cd03678, MM_CoA_mutase_1, Coenzyme B12-dependent-methylmalonyl coenzyme A (CoA) mutase (MCM) family, unknown subfamily 1; composed of uncharacterized bacterial proteins containing a C-terminal MCM domain	NA|283aa|down_3|NZ_CP025118.1_1947570_1948419_+	PRK06027, purU, formyltetrahydrofolate deformylase; Reviewed	NA|235aa|down_4|NZ_CP025118.1_1948591_1949296_+	pfam13852, DUF4197, Protein of unknown function (DUF4197)	NA|264aa|down_5|NZ_CP025118.1_1949932_1950724_-	cd01144, BtuF, Cobalamin binding protein BtuF	NA|272aa|down_6|NZ_CP025118.1_1950903_1951719_-	PRK00125, pyrF, orotidine 5'-phosphate decarboxylase; Reviewed	NA|359aa|down_7|NZ_CP025118.1_1951835_1952912_-	PRK00591, prfA, peptide chain release factor 1; Validated	NA|238aa|down_8|NZ_CP025118.1_1952950_1953664_-	NA	NA|314aa|down_9|NZ_CP025118.1_1954465_1955407_-	pfam11276, DUF3078, Protein of unknown function (DUF3078)
GCF_002831665.1_ASM283166v1	NZ_CP025118	Lacinutrix sp. Bg11-31 chromosome, complete genome	3	2866078-2866178	3	CRISPRCasFinder	no		RT,DEDDh,cas3,WYL,cas1,cas2,cas9	Orphan	TTAATTGTTCCACGTGAAACATT	23	0	0	NA	NA	NA	1	1	Orphan	RT,DEDDh,cas3,WYL,cas1,cas2,cas9	NA|526aa|up_5|NZ_CP025118.1_2857216_2858794_-,NA|630aa|up_3|NZ_CP025118.1_2860143_2862033_-,NA|229aa|down_4|NZ_CP025118.1_2873852_2874539_-,NA|299aa|down_6|NZ_CP025118.1_2875650_2876547_-	NA|62aa|up_9|NZ_CP025118.1_2853106_2853292_+	COG1826, TatA, Sec-independent protein secretion pathway components [Intracellular trafficking and secretion]	NA|329aa|up_8|NZ_CP025118.1_2853364_2854351_-	pfam16125, DUF4837, Domain of unknown function (DUF4837)	NA|528aa|up_7|NZ_CP025118.1_2854373_2855957_-	PRK10783, mltD, membrane-bound lytic murein transglycosylase D; Provisional	NA|396aa|up_6|NZ_CP025118.1_2856011_2857199_-	PRK00073, pgk, phosphoglycerate kinase; Provisional	NA|526aa|up_5|NZ_CP025118.1_2857216_2858794_-	NA	NA|385aa|up_4|NZ_CP025118.1_2858963_2860118_+	TIGR00678, DNA_polymerase_III_subunit_delta', DNA polymerase III, delta' subunit	NA|630aa|up_3|NZ_CP025118.1_2860143_2862033_-	NA	NA|171aa|up_2|NZ_CP025118.1_2862173_2862686_-	smart00935, OmpH, Outer membrane protein (OmpH-like)	NA|287aa|up_1|NZ_CP025118.1_2862910_2863771_-	pfam13489, Methyltransf_23, Methyltransferase domain	NA|624aa|up_0|NZ_CP025118.1_2864199_2866071_-	PRK05192, PRK05192, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA|137aa|down_0|NZ_CP025118.1_2866226_2866637_-	pfam02130, UPF0054, Uncharacterized protein family UPF0054	NA|1170aa|down_1|NZ_CP025118.1_2866629_2870139_-	COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]	NA|503aa|down_2|NZ_CP025118.1_2870385_2871894_+	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed	NA|609aa|down_3|NZ_CP025118.1_2871969_2873796_-	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain	NA|229aa|down_4|NZ_CP025118.1_2873852_2874539_-	NA	NA|312aa|down_5|NZ_CP025118.1_2874644_2875580_+	cd03407, SPFH_like_u4, Uncharacterized family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily	NA|299aa|down_6|NZ_CP025118.1_2875650_2876547_-	NA	NA|387aa|down_7|NZ_CP025118.1_2876631_2877792_-	pfam13480, Acetyltransf_6, Acetyltransferase (GNAT) domain	NA|160aa|down_8|NZ_CP025118.1_2877850_2878330_-	pfam08570, DUF1761, Protein of unknown function (DUF1761)	NA|1207aa|down_9|NZ_CP025118.1_2878446_2882067_-	cd04842, Peptidases_S8_Kp43_protease, Peptidase S8 family domain in Kp43 proteases
GCF_002831665.1_ASM283166v1	NZ_CP025118	Lacinutrix sp. Bg11-31 chromosome, complete genome	4	2971610-2972049	4,2	CRISPRCasFinder,PILER-CR	no		RT,DEDDh,cas3,WYL,cas1,cas2,cas9	Orphan	CCATCACCATCAGCATCAGGACAACCGTT,CCATCACCATCAGTATCAGGACAACCGTT	29,29	0	0	NA	NA	NA:NA	5,2	5	Orphan	RT,DEDDh,cas3,WYL,cas1,cas2,cas9	NA|232aa|up_6|NZ_CP025118.1_2963093_2963789_+,NA|119aa|down_4|NZ_CP025118.1_2978812_2979169_+,NA|132aa|down_6|NZ_CP025118.1_2980583_2980979_+,NA|317aa|down_9|NZ_CP025118.1_2983785_2984736_+	NA|425aa|up_9|NZ_CP025118.1_2959552_2960827_+	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|440aa|up_8|NZ_CP025118.1_2960829_2962149_-	cd16154, sulfatase_like, uncharacterized sulfatase subfamily	NA|220aa|up_7|NZ_CP025118.1_2962352_2963012_+	pfam01471, PG_binding_1, Putative peptidoglycan binding domain	NA|232aa|up_6|NZ_CP025118.1_2963093_2963789_+	NA	NA|251aa|up_5|NZ_CP025118.1_2963785_2964538_-	cd07398, MPP_YbbF-LpxH, Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain	NA|151aa|up_4|NZ_CP025118.1_2964751_2965204_-	pfam01242, PTPS, 6-pyruvoyl tetrahydropterin synthase	NA|445aa|up_3|NZ_CP025118.1_2965342_2966677_-	cd13136, MATE_DinF_like, DinF and similar proteins, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins	NA|266aa|up_2|NZ_CP025118.1_2966767_2967565_+	cd00293, USP_Like, Usp: Universal stress protein family	NA|280aa|up_1|NZ_CP025118.1_2967579_2968419_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|918aa|up_0|NZ_CP025118.1_2968418_2971172_-	pfam12705, PDDEXK_1, PD-(D/E)XK nuclease superfamily	NA|399aa|down_0|NZ_CP025118.1_2972820_2974017_-	PRK06939, PRK06939, 2-amino-3-ketobutyrate coenzyme A ligase; Provisional	NA|1053aa|down_1|NZ_CP025118.1_2974062_2977221_-	COG1074, RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair]	NA|203aa|down_2|NZ_CP025118.1_2977424_2978033_+	COG0605, SodA, Superoxide dismutase [Inorganic ion transport and metabolism]	NA|174aa|down_3|NZ_CP025118.1_2978120_2978642_-	pfam02674, Colicin_V, Colicin V production protein	NA|119aa|down_4|NZ_CP025118.1_2978812_2979169_+	NA	NA|340aa|down_5|NZ_CP025118.1_2979394_2980414_+	PRK00488, pheS, phenylalanyl-tRNA synthetase subunit alpha; Validated	NA|132aa|down_6|NZ_CP025118.1_2980583_2980979_+	NA	NA|490aa|down_7|NZ_CP025118.1_2980984_2982454_-	pfam00144, Beta-lactamase, Beta-lactamase	NA|334aa|down_8|NZ_CP025118.1_2982649_2983651_-	COG0240, GpsA, Glycerol-3-phosphate dehydrogenase [Energy production and conversion]	NA|317aa|down_9|NZ_CP025118.1_2983785_2984736_+	NA
