assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002838165.1_ASM283816v1	NZ_CP015194	Shewanella sp. Pdp11 chromosome, complete genome	1	1578313-1578414	1	CRISPRCasFinder	no	cas3	csa3,PrimPol,RT,cas3,PD-DExK,WYL,DinG,DEDDh	Unclear	AATCAACAGATCAAGCATGGATGTGGAATTAACT	34	0	0	NA	NA	NA	1	1	Unclear	csa3,PrimPol,RT,cas3,PD-DExK,WYL,DinG,DEDDh	NA|176aa|up_9|NZ_CP015194.1_1568934_1569462_-,NA|169aa|down_3|NZ_CP015194.1_1581062_1581569_+,NA|89aa|down_9|NZ_CP015194.1_1587552_1587819_+	NA|176aa|up_9|NZ_CP015194.1_1568934_1569462_-	NA	NA|282aa|up_8|NZ_CP015194.1_1569869_1570715_-	PRK00380, panC, pantoate--beta-alanine ligase; Reviewed	NA|265aa|up_7|NZ_CP015194.1_1570742_1571537_-	PRK00311, panB, 3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed	NA|163aa|up_6|NZ_CP015194.1_1571593_1572082_-	COG0801, FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]	NA|494aa|up_5|NZ_CP015194.1_1572081_1573563_-	TIGR01942, pcnB, poly(A) polymerase	NA|305aa|up_4|NZ_CP015194.1_1573642_1574557_-	PRK05710, PRK05710, tRNA glutamyl-Q(34) synthetase GluQRS	NA|148aa|up_3|NZ_CP015194.1_1574726_1575170_-	PRK10778, dksA, RNA polymerase-binding protein DksA	NA|235aa|up_2|NZ_CP015194.1_1575333_1576038_-	PRK00347, PRK00347, DNA/RNA nuclease SfsA	NA|431aa|up_1|NZ_CP015194.1_1576215_1577508_+	PRK05015, PRK05015, aminopeptidase B; Provisional	NA|171aa|up_0|NZ_CP015194.1_1577710_1578223_+	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain	NA|296aa|down_0|NZ_CP015194.1_1578623_1579511_-	PRK15453, PRK15453, phosphoribulokinase; Provisional	NA|82aa|down_1|NZ_CP015194.1_1579601_1579847_-	pfam06794, UPF0270, Uncharacterized protein family (UPF0270)	NA|348aa|down_2|NZ_CP015194.1_1579830_1580874_-	PRK10985, PRK10985, putative hydrolase; Provisional	NA|169aa|down_3|NZ_CP015194.1_1581062_1581569_+	NA	NA|532aa|down_4|NZ_CP015194.1_1581638_1583234_+	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]	NA|137aa|down_5|NZ_CP015194.1_1583285_1583696_+	COG3791, COG3791, Uncharacterized conserved protein [Function unknown]	NA|154aa|down_6|NZ_CP015194.1_1583773_1584235_-	pfam09523, DUF2390, Protein of unknown function (DUF2390)	NA|638aa|down_7|NZ_CP015194.1_1584289_1586203_-	PRK10636, PRK10636, putative ABC transporter ATP-binding protein; Provisional	NA|68aa|down_8|NZ_CP015194.1_1586456_1586660_+	TIGR02443, Hypothetical_protein_yheV	NA|89aa|down_9|NZ_CP015194.1_1587552_1587819_+	NA
GCF_002838165.1_ASM283816v1	NZ_CP015194	Shewanella sp. Pdp11 chromosome, complete genome	2	3567554-3567667	2	CRISPRCasFinder	no		csa3,PrimPol,RT,cas3,PD-DExK,WYL,DinG,DEDDh	Orphan	GGAGGTTAATTACCATGCCATTAAGACTGGATGTCCATTTTTC	43	0	0	NA	NA	NA	1	1	Orphan	csa3,PrimPol,RT,cas3,PD-DExK,WYL,DinG,DEDDh	NA|115aa|up_9|NZ_CP015194.1_3552504_3552849_+,NA|326aa|up_0|NZ_CP015194.1_3566537_3567515_-,NA|160aa|down_2|NZ_CP015194.1_3572695_3573175_+	NA|115aa|up_9|NZ_CP015194.1_3552504_3552849_+	NA	NA|265aa|up_8|NZ_CP015194.1_3554771_3555566_-	pfam01987, AIM24, Mitochondrial biogenesis AIM24	NA|305aa|up_7|NZ_CP015194.1_3555823_3556738_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|387aa|up_6|NZ_CP015194.1_3556952_3558113_+	COG3508, HmgA, Homogentisate 1,2-dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|347aa|up_5|NZ_CP015194.1_3558210_3559251_+	TIGR01263, 4-hydroxyphenylpyruvate_dioxygenase, 4-hydroxyphenylpyruvate dioxygenase	NA|195aa|up_4|NZ_CP015194.1_3559372_3559957_-	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates	NA|208aa|up_3|NZ_CP015194.1_3560305_3560929_+	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]	NA|475aa|up_2|NZ_CP015194.1_3561062_3562487_-	pfam04339, FemAB_like, Peptidogalycan biosysnthesis/recognition	NA|580aa|up_1|NZ_CP015194.1_3562595_3564335_+	PRK09615, ggt, gamma-glutamyltranspeptidase; Reviewed	NA|326aa|up_0|NZ_CP015194.1_3566537_3567515_-	NA	NA|550aa|down_0|NZ_CP015194.1_3567952_3569602_-	PRK06156, PRK06156, dipeptidase	NA|735aa|down_1|NZ_CP015194.1_3570013_3572218_+	cd06456, M3A_DCP, Peptidase family M3, dipeptidyl carboxypeptidase (DCP)	NA|160aa|down_2|NZ_CP015194.1_3572695_3573175_+	NA	NA|150aa|down_3|NZ_CP015194.1_3573292_3573742_+	PRK10514, PRK10514, putative acetyltransferase; Provisional	NA|715aa|down_4|NZ_CP015194.1_3573883_3576028_-	cd06456, M3A_DCP, Peptidase family M3, dipeptidyl carboxypeptidase (DCP)	NA|682aa|down_5|NZ_CP015194.1_3576735_3578781_+	PRK09420, cpdB, bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase	NA|253aa|down_6|NZ_CP015194.1_3578986_3579745_+	pfam09829, DUF2057, Uncharacterized protein conserved in bacteria (DUF2057)	NA|346aa|down_7|NZ_CP015194.1_3580091_3581130_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|183aa|down_8|NZ_CP015194.1_3587652_3588201_-	PRK08942, PRK08942, D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA|224aa|down_9|NZ_CP015194.1_3588666_3589338_+	COG1802, GntR, Transcriptional regulators [Transcription]
GCF_002838165.1_ASM283816v1	NZ_CP015194	Shewanella sp. Pdp11 chromosome, complete genome	3	3768370-3768484	3	CRISPRCasFinder	no	cas3	csa3,PrimPol,RT,cas3,PD-DExK,WYL,DinG,DEDDh	Unclear	ACGAAGGGGACCCGGACATATTAATTTGAACT	32	0	0	NA	NA	NA	1	1	Unclear	csa3,PrimPol,RT,cas3,PD-DExK,WYL,DinG,DEDDh	NA,NA|77aa|down_1|NZ_CP015194.1_3773234_3773465_+	NA|139aa|up_9|NZ_CP015194.1_3755798_3756215_-	pfam14106, DUF4279, Domain of unknown function (DUF4279)	NA|460aa|up_8|NZ_CP015194.1_3756882_3758262_+	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|175aa|up_7|NZ_CP015194.1_3758455_3758980_-	pfam08547, CIA30, Complex I intermediate-associated protein 30 (CIA30)	NA|409aa|up_6|NZ_CP015194.1_3759055_3760282_-	PRK13628, PRK13628, serine/threonine transporter SstT; Provisional	NA|299aa|up_5|NZ_CP015194.1_3760456_3761353_-	cd19924, REC_CheV-like, phosphoacceptor receiver (REC) domain of chemotaxis protein CheV and similar proteins	NA|157aa|up_4|NZ_CP015194.1_3761493_3761964_-	cd14504, DUSP23, dual specificity phosphatase 23	cas3|428aa|up_3|NZ_CP015194.1_3762036_3763320_-	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis]	NA|186aa|up_2|NZ_CP015194.1_3763367_3763925_-	PRK00901, PRK00901, methylated-DNA--protein-cysteine methyltransferase; Provisional	NA|564aa|up_1|NZ_CP015194.1_3764017_3765709_-	COG2169, Ada, Adenosine deaminase [Nucleotide transport and metabolism]	NA|610aa|up_0|NZ_CP015194.1_3765880_3767710_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|470aa|down_0|NZ_CP015194.1_3770147_3771557_-	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed	NA|77aa|down_1|NZ_CP015194.1_3773234_3773465_+	NA	NA|340aa|down_2|NZ_CP015194.1_3773931_3774951_+	cd13674, PBP2_TRAP_SBP_like_1, Uncharacterized substrate-binding protein of the Tripartite ATP-independent  Periplasmic transporter family; the type 2 periplasmic-binding protein fold	NA|244aa|down_3|NZ_CP015194.1_3775016_3775748_+	COG3090, DctM, TRAP-type C4-dicarboxylate transport system, small permease component [Carbohydrate transport and metabolism]	NA|466aa|down_4|NZ_CP015194.1_3775747_3777145_+	TIGR00786, TRAP_transporter_permease_protein_SiaT, TRAP transporter, DctM subunit	NA|599aa|down_5|NZ_CP015194.1_3777274_3779071_+	COG4191, COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms]	NA|460aa|down_6|NZ_CP015194.1_3779075_3780455_+	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|150aa|down_7|NZ_CP015194.1_3780536_3780986_-	pfam04657, DMT_YdcZ, Putative inner membrane exporter, YdcZ	NA|145aa|down_8|NZ_CP015194.1_3780995_3781430_-	pfam04657, DMT_YdcZ, Putative inner membrane exporter, YdcZ	NA|313aa|down_9|NZ_CP015194.1_3781526_3782465_+	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain
