assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002838345.1_ASM283834v1	NZ_CP021389	Bifidobacterium breve strain NRBB57 chromosome, complete genome	1	153277-153613	1	CRISPRCasFinder	no		DEDDh,cas3,WYL,cas14j,c2c9_V-U4,c2c10_CAS-V-U3,cas14k	Orphan	TACTGGTGGTTTTGCCCCGCTGAGG	25	0	0	NA	NA	NA	6	6	Orphan	DEDDh,cas3,WYL,cas14j,c2c9_V-U4,c2c10_CAS-V-U3,cas14k	NA,NA|262aa|down_3|NZ_CP021389.1_158630_159416_-	NA|312aa|up_9|NZ_CP021389.1_139686_140622_+	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|356aa|up_8|NZ_CP021389.1_140684_141752_+	PRK09197, PRK09197, fructose-bisphosphate aldolase; Provisional	NA|429aa|up_7|NZ_CP021389.1_141905_143192_+	PRK01117, PRK01117, adenylosuccinate synthetase; Provisional	NA|528aa|up_6|NZ_CP021389.1_143215_144799_+	cd01031, EriC, ClC chloride channel EriC	NA|364aa|up_5|NZ_CP021389.1_144935_146027_+	COG0239, CrcB, Integral membrane protein possibly involved in chromosome condensation [Cell division and chromosome partitioning]	NA|356aa|up_4|NZ_CP021389.1_145354_146422_+	pfam02537, CRCB, CrcB-like protein, Camphor Resistance (CrcB)	NA|362aa|up_3|NZ_CP021389.1_147051_148137_+	cd06291, PBP1_Qymf-like, ligand binding domain of the lacI-like transcription regulator from a novel metal-reducing bacterium Alkaliphilus Metalliredigens (strain Qymf) and its close homologs	NA|509aa|up_2|NZ_CP021389.1_148563_150090_+	PRK13840, PRK13840, sucrose phosphorylase; Provisional	NA|545aa|up_1|NZ_CP021389.1_150294_151929_+	cd06174, MFS, Major Facilitator Superfamily	NA|351aa|up_0|NZ_CP021389.1_151998_153051_+	cd06291, PBP1_Qymf-like, ligand binding domain of the lacI-like transcription regulator from a novel metal-reducing bacterium Alkaliphilus Metalliredigens (strain Qymf) and its close homologs	NA|456aa|down_0|NZ_CP021389.1_154034_155402_+	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily	NA|351aa|down_1|NZ_CP021389.1_155796_156849_+	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional	NA|351aa|down_2|NZ_CP021389.1_157276_158329_+	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional	NA|262aa|down_3|NZ_CP021389.1_158630_159416_-	NA	NA|343aa|down_4|NZ_CP021389.1_159412_160441_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|605aa|down_5|NZ_CP021389.1_160647_162462_-	cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), trehalose synthase (also called maltose alpha-D-glucosyltransferase), and related proteins	NA|344aa|down_6|NZ_CP021389.1_162733_163765_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|1471aa|down_7|NZ_CP021389.1_164675_169088_+	pfam17802, SpaA, Prealbumin-like fold domain	NA|612aa|down_8|NZ_CP021389.1_169192_171028_+	pfam16569, GramPos_pilinBB, Gram-positive pilin backbone subunit 2, Cna-B-like domain	NA|320aa|down_9|NZ_CP021389.1_171284_172244_+	cd05827, Sortase_C, Sortase domain found in class C sortases
GCF_002838345.1_ASM283834v1	NZ_CP021389	Bifidobacterium breve strain NRBB57 chromosome, complete genome	2	2262522-2262668	2	CRISPRCasFinder	no		DEDDh,cas3,WYL,cas14j,c2c9_V-U4,c2c10_CAS-V-U3,cas14k	Orphan	AATCTCCTAAAATCCTGTCACTAAG	25	1	1	2262547-2262582	NZ_CP021389.1_2263884-2263919	NA	2	2	Orphan	DEDDh,cas3,WYL,cas14j,c2c9_V-U4,c2c10_CAS-V-U3,cas14k	NA|702aa|up_3|NZ_CP021389.1_2257711_2259817_+,NA|318aa|down_0|NZ_CP021389.1_2262782_2263736_+	NA|75aa|up_9|NZ_CP021389.1_2240883_2241108_-	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|3146aa|up_8|NZ_CP021389.1_2242506_2251944_-	COG4982, COG4982, 3-oxoacyl-[acyl-carrier protein]	NA|541aa|up_7|NZ_CP021389.1_2251983_2253606_-	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]	NA|623aa|up_6|NZ_CP021389.1_2253598_2255467_-	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism]	NA|200aa|up_5|NZ_CP021389.1_2255979_2256579_+	pfam02632, BioY, BioY family	NA|320aa|up_4|NZ_CP021389.1_2256580_2257540_-	COG0340, BirA, Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme metabolism]	NA|702aa|up_3|NZ_CP021389.1_2257711_2259817_+	NA	NA|286aa|up_2|NZ_CP021389.1_2259895_2260753_+	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]	NA|231aa|up_1|NZ_CP021389.1_2261026_2261719_-	PRK05424, rplA, 50S ribosomal protein L1; Validated	NA|144aa|up_0|NZ_CP021389.1_2261734_2262166_-	PRK00140, rplK, 50S ribosomal protein L11; Validated	NA|318aa|down_0|NZ_CP021389.1_2262782_2263736_+	NA	NA|276aa|down_1|NZ_CP021389.1_2264091_2264919_-	PRK05609, nusG, transcription antitermination protein NusG; Validated	NA|76aa|down_2|NZ_CP021389.1_2264951_2265179_-	PRK07597, secE, preprotein translocase subunit SecE; Reviewed	NA|402aa|down_3|NZ_CP021389.1_2265508_2266714_-	PRK05764, PRK05764, aspartate aminotransferase; Provisional	NA|421aa|down_4|NZ_CP021389.1_2266855_2268118_+	cd10966, CE4_yadE_5s, Putative catalytic polysaccharide deacetylase domain of uncharacterized protein yadE and similar proteins	NA|378aa|down_5|NZ_CP021389.1_2268213_2269347_-	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional	NA|564aa|down_6|NZ_CP021389.1_2269452_2271144_-	PRK12296, obgE, GTPase CgtA; Reviewed	NA|84aa|down_7|NZ_CP021389.1_2271210_2271462_-	PRK05435, rpmA, 50S ribosomal protein L27; Validated	NA|103aa|down_8|NZ_CP021389.1_2271484_2271793_-	PRK05573, rplU, 50S ribosomal protein L21; Validated	NA|1024aa|down_9|NZ_CP021389.1_2271979_2275051_-	TIGR00757, Ribonuclease_E/G-like_protein, ribonuclease, Rne/Rng family
GCF_002838345.1_ASM283834v1	NZ_CP021389	Bifidobacterium breve strain NRBB57 chromosome, complete genome	3	2404071-2404147	3	CRISPRCasFinder	no		DEDDh,cas3,WYL,cas14j,c2c9_V-U4,c2c10_CAS-V-U3,cas14k	Orphan	GCAAATCCCCCAACCAATCGAAGAA	25	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,WYL,cas14j,c2c9_V-U4,c2c10_CAS-V-U3,cas14k	NA|116aa|up_9|NZ_CP021389.1_2387470_2387818_+,NA	NA|116aa|up_9|NZ_CP021389.1_2387470_2387818_+	NA	NA|350aa|up_8|NZ_CP021389.1_2387937_2388987_-	COG0313, COG0313, Predicted methyltransferases [General function prediction only]	NA|473aa|up_7|NZ_CP021389.1_2389616_2391035_-	cd17332, MFS_MelB_like, Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily	NA|314aa|up_6|NZ_CP021389.1_2391139_2392081_+	pfam02424, ApbE, ApbE family	NA|610aa|up_5|NZ_CP021389.1_2392089_2393919_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|623aa|up_4|NZ_CP021389.1_2394050_2395919_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|174aa|up_3|NZ_CP021389.1_2396102_2396624_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|508aa|up_2|NZ_CP021389.1_2397549_2399073_-	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism]	NA|1253aa|up_1|NZ_CP021389.1_2399325_2403084_-	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|234aa|up_0|NZ_CP021389.1_2403093_2403795_-	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|491aa|down_0|NZ_CP021389.1_2404277_2405750_+	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism]	NA|202aa|down_1|NZ_CP021389.1_2405801_2406407_-	pfam04854, DUF624, Protein of unknown function, DUF624	NA|281aa|down_2|NZ_CP021389.1_2406557_2407400_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|285aa|down_3|NZ_CP021389.1_2407399_2408254_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|339aa|down_4|NZ_CP021389.1_2408624_2409641_+	COG1609, PurR, Transcriptional regulators [Transcription]	NA|443aa|down_5|NZ_CP021389.1_2409848_2411177_-	pfam13416, SBP_bac_8, Bacterial extracellular solute-binding protein	NA|233aa|down_6|NZ_CP021389.1_2411589_2412288_-	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1)	NA|126aa|down_7|NZ_CP021389.1_2412374_2412752_+	pfam14019, DUF4235, Protein of unknown function (DUF4235)	NA|256aa|down_8|NZ_CP021389.1_2412847_2413615_+	cd02146, NfsA-like, nitroreductase similar to Escherichia coli NfsA	NA|916aa|down_9|NZ_CP021389.1_2413782_2416530_+	COG1511, COG1511, Predicted membrane protein [Function unknown]
