assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002846155.1_ASM284615v1	NZ_CP025400	Streptococcus thermophilus strain EPS chromosome, complete genome	1	896474-896575	1	CRISPRCasFinder	no	csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,cas2	cas3,DEDDh,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,cas2,DinG,csn2,cas1,cas9	Type III-B,Type III-C,Type III-D,Type III-A	GTCCCCTCTCGAGGTAATTAGGTTTATATC	30	0	0	NA	NA	NA	1	1	TypeIII-B,TypeIII-C,TypeIII-D,TypeIII-A	cas3,DEDDh,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,cas2,DinG,csn2,cas1,cas9	NA,NA|70aa|down_5|NZ_CP025400.1_903881_904091_-,NA|151aa|down_8|NZ_CP025400.1_908221_908674_-	NA|148aa|up_9|NZ_CP025400.1_886733_887177_-	PRK06529, PRK06529, amidase; Provisional	NA|210aa|up_8|NZ_CP025400.1_887381_888011_-	PRK00455, pyrE, orotate phosphoribosyltransferase; Validated	NA|232aa|up_7|NZ_CP025400.1_888099_888795_-	PRK00230, PRK00230, orotidine-5'-phosphate decarboxylase	csm6|392aa|up_6|NZ_CP025400.1_888994_890170_-	cd09699, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	csm5gr7|358aa|up_5|NZ_CP025400.1_890325_891399_-	COG1332, COG1332, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csm4gr5|300aa|up_4|NZ_CP025400.1_891401_892301_-	pfam17953, Csm4_C, CRISPR Csm4 C-terminal domain	csm3gr7|221aa|up_3|NZ_CP025400.1_892302_892965_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|127aa|up_2|NZ_CP025400.1_892964_893345_-	pfam03750, Csm2_III-A, Csm2 Type III-A	cas10|759aa|up_1|NZ_CP025400.1_893348_895625_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	cas6|244aa|up_0|NZ_CP025400.1_895605_896337_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	cas2|110aa|down_0|NZ_CP025400.1_896675_897005_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|316aa|down_1|NZ_CP025400.1_898146_899094_-	PRK07259, PRK07259, dihydroorotate dehydrogenase	NA|268aa|down_2|NZ_CP025400.1_899112_899916_-	PRK00054, PRK00054, dihydroorotate dehydrogenase electron transfer subunit; Reviewed	NA|183aa|down_3|NZ_CP025400.1_900157_900706_-	cd03135, GATase1_DJ-1, Type 1 glutamine amidotransferase (GATase1)-like domain found in Human DJ-1	NA|553aa|down_4|NZ_CP025400.1_901847_903506_+	pfam05833, FbpA, Fibronectin-binding protein A N-terminus (FbpA)	NA|70aa|down_5|NZ_CP025400.1_903881_904091_-	NA	NA|212aa|down_6|NZ_CP025400.1_906414_907050_+	cd04302, HAD_5NT, haloacid dehalogenase (HAD)-like 5'-nucleotidases similar to the Pseudomonas aeruginosa PA0065	NA|255aa|down_7|NZ_CP025400.1_907111_907876_-	cd09007, NP-I_spr0068, uncharacterized subfamily of the nucleoside phosphorylase-I family	NA|151aa|down_8|NZ_CP025400.1_908221_908674_-	NA	NA|346aa|down_9|NZ_CP025400.1_910256_911294_-	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like
GCF_002846155.1_ASM284615v1	NZ_CP025400	Streptococcus thermophilus strain EPS chromosome, complete genome	2	1136592-1137352	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	csn2,cas2,cas1,cas9	cas3,DEDDh,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,cas2,DinG,csn2,cas1,cas9	Type II-A,Type II-B,Type II-C	GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC,GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC,GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC	36,36,36	0	0	NA	NA	NA:NA:NA	11,11,11	11	TypeII-A,TypeII-B,TypeII-C	cas3,DEDDh,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6,cas2,DinG,csn2,cas1,cas9	NA,NA	NA|99aa|up_9|NZ_CP025400.1_1128439_1128736_+	pfam11674, DUF3270, Protein of unknown function (DUF3270)	NA|145aa|up_8|NZ_CP025400.1_1128762_1129197_-	pfam12732, YtxH, YtxH-like protein	NA|133aa|up_7|NZ_CP025400.1_1129209_1129608_-	COG4768, COG4768, Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain [General function prediction only]	NA|264aa|up_6|NZ_CP025400.1_1129730_1130522_-	PRK12437, PRK12437, prolipoprotein diacylglyceryl transferase; Reviewed	NA|310aa|up_5|NZ_CP025400.1_1130521_1131451_-	PRK05428, PRK05428, HPr kinase/phosphorylase; Provisional	NA|88aa|up_4|NZ_CP025400.1_1131579_1131843_-	COG1983, PspC, Putative stress-responsive transcriptional regulator [Transcription / Signal transduction mechanisms]	NA|147aa|up_3|NZ_CP025400.1_1131909_1132350_-	PRK04351, PRK04351, SprT family protein	NA|711aa|up_2|NZ_CP025400.1_1132336_1134469_-	COG2183, Tex, Transcriptional accessory protein [Transcription]	NA|301aa|up_1|NZ_CP025400.1_1134832_1135735_+	COG0701, COG0701, Predicted permeases [General function prediction only]	NA|272aa|up_0|NZ_CP025400.1_1135734_1136550_+	COG3689, COG3689, Predicted membrane protein [Function unknown]	csn2|351aa|down_0|NZ_CP025400.1_1137414_1138467_-	pfam16813, Cas_St_Csn2, CRISPR-associated protein Csn2 subfamily St	cas2|108aa|down_1|NZ_CP025400.1_1138463_1138787_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|304aa|down_2|NZ_CP025400.1_1138788_1139700_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas9|1129aa|down_3|NZ_CP025400.1_1139877_1143264_-	cd09643, Csn1, CRISPR/Cas system-associated protein Cas9	NA|204aa|down_4|NZ_CP025400.1_1143520_1144132_-	pfam09911, DUF2140, Uncharacterized protein conserved in bacteria (DUF2140)	NA|153aa|down_5|NZ_CP025400.1_1144727_1145186_-	COG3392, COG3392, Adenine-specific DNA methylase [DNA replication, recombination, and repair]	NA|74aa|down_6|NZ_CP025400.1_1145185_1145407_-	COG3655, COG3655, Predicted transcriptional regulator [Transcription]	NA|454aa|down_7|NZ_CP025400.1_1146614_1147976_-	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]	NA|183aa|down_8|NZ_CP025400.1_1148191_1148740_+	COG2128, COG2128, Uncharacterized conserved protein [Function unknown]	NA|355aa|down_9|NZ_CP025400.1_1148779_1149844_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]
