assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002847385.1_ASM284738v1	NZ_CP025298	Stenotrophomonas maltophilia strain CSM2 chromosome, complete genome	1	543463-543563	1	CRISPRCasFinder	no		cas3,DEDDh,csa3,WYL,Cas9_archaeal,DinG	Orphan	CCATCCACGCATGGCGTGGATCT	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,WYL,Cas9_archaeal,DinG	NA|61aa|up_6|NZ_CP025298.1_536966_537149_+,NA|88aa|down_0|NZ_CP025298.1_543606_543870_-,NA|185aa|down_7|NZ_CP025298.1_549579_550134_-	NA|285aa|up_9|NZ_CP025298.1_534893_535748_-	PRK09110, PRK09110, flagellar motor stator protein MotA	NA|156aa|up_8|NZ_CP025298.1_535839_536307_-	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|125aa|up_7|NZ_CP025298.1_536447_536822_+	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|61aa|up_6|NZ_CP025298.1_536966_537149_+	NA	NA|160aa|up_5|NZ_CP025298.1_537206_537686_-	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|435aa|up_4|NZ_CP025298.1_537835_539140_+	PRK00711, PRK00711, D-amino acid dehydrogenase	NA|356aa|up_3|NZ_CP025298.1_539118_540186_+	cd06827, PLPDE_III_AR_proteobact, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, Proteobacterial Alanine Racemases	NA|189aa|up_2|NZ_CP025298.1_540312_540879_-	pfam11454, DUF3016, Protein of unknown function (DUF3016)	NA|663aa|up_1|NZ_CP025298.1_541123_543112_+	PRK11091, PRK11091, aerobic respiration control sensor protein ArcB; Provisional	NA|97aa|up_0|NZ_CP025298.1_543155_543446_+	pfam11607, DUF3247, Protein of unknown function (DUF3247)	NA|88aa|down_0|NZ_CP025298.1_543606_543870_-	NA	NA|355aa|down_1|NZ_CP025298.1_544027_545092_+	pfam05175, MTS, Methyltransferase small domain	NA|234aa|down_2|NZ_CP025298.1_545088_545790_+	cd02553, PseudoU_synth_RsuA, Pseudouridine synthase, Escherichia coli RsuA like	NA|228aa|down_3|NZ_CP025298.1_545786_546470_+	COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only]	NA|403aa|down_4|NZ_CP025298.1_546506_547715_-	PRK07967, PRK07967, beta-ketoacyl-ACP synthase I	NA|172aa|down_5|NZ_CP025298.1_547714_548230_-	PRK05174, PRK05174, bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA|365aa|down_6|NZ_CP025298.1_548420_549515_+	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|185aa|down_7|NZ_CP025298.1_549579_550134_-	NA	NA|304aa|down_8|NZ_CP025298.1_550285_551197_-	cd07739, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|213aa|down_9|NZ_CP025298.1_551288_551927_-	COG2910, COG2910, Putative NADH-flavin reductase [General function prediction only]
GCF_002847385.1_ASM284738v1	NZ_CP025298	Stenotrophomonas maltophilia strain CSM2 chromosome, complete genome	2	754209-754303	2	CRISPRCasFinder	no		cas3,DEDDh,csa3,WYL,Cas9_archaeal,DinG	Orphan	GCCATCCACGCGTGGCGTGGATCTAC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,WYL,Cas9_archaeal,DinG	NA,NA|162aa|down_0|NZ_CP025298.1_754344_754830_-	NA|911aa|up_9|NZ_CP025298.1_743020_745753_+	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed	NA|318aa|up_8|NZ_CP025298.1_745866_746820_+	PRK08999, PRK08999, Nudix family hydrolase	NA|195aa|up_7|NZ_CP025298.1_746892_747477_-	pfam13511, DUF4124, Domain of unknown function (DUF4124)	NA|276aa|up_6|NZ_CP025298.1_747517_748345_-	TIGR00676, 510-methylenetetrahydrofolate_reductase	NA|309aa|up_5|NZ_CP025298.1_748548_749475_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|349aa|up_4|NZ_CP025298.1_749501_750548_+	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms]	NA|244aa|up_3|NZ_CP025298.1_750544_751276_+	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms]	NA|506aa|up_2|NZ_CP025298.1_751282_752800_-	cd01299, Met_dep_hydrolase_A, Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site	NA|186aa|up_1|NZ_CP025298.1_752936_753494_+	pfam11539, DUF3228, Protein of unknown function (DUF3228)	NA|212aa|up_0|NZ_CP025298.1_753570_754206_+	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal	NA|162aa|down_0|NZ_CP025298.1_754344_754830_-	NA	NA|158aa|down_1|NZ_CP025298.1_754829_755303_-	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins	NA|482aa|down_2|NZ_CP025298.1_755582_757028_-	pfam05221, AdoHcyase, S-adenosyl-L-homocysteine hydrolase	NA|839aa|down_3|NZ_CP025298.1_757268_759785_+	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]	NA|904aa|down_4|NZ_CP025298.1_759957_762669_+	PRK00009, PRK00009, phosphoenolpyruvate carboxylase; Reviewed	NA|169aa|down_5|NZ_CP025298.1_762736_763243_-	COG1607, COG1607, Acyl-CoA hydrolase [Lipid metabolism]	NA|404aa|down_6|NZ_CP025298.1_763382_764594_-	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|572aa|down_7|NZ_CP025298.1_764931_766647_+	cd07986, LPLAT_ACT14924-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: Unknown ACT14924	NA|267aa|down_8|NZ_CP025298.1_766643_767444_+	cd07398, MPP_YbbF-LpxH, Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain	NA|353aa|down_9|NZ_CP025298.1_767600_768659_+	pfam04307, YdjM, LexA-binding, inner membrane-associated putative hydrolase
GCF_002847385.1_ASM284738v1	NZ_CP025298	Stenotrophomonas maltophilia strain CSM2 chromosome, complete genome	3	2587738-2587855	3	CRISPRCasFinder	no		cas3,DEDDh,csa3,WYL,Cas9_archaeal,DinG	Orphan	GCGTGCCAACCAAGGTTGGCACCTACCAAG	30	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,WYL,Cas9_archaeal,DinG	NA,NA|61aa|down_1|NZ_CP025298.1_2590400_2590583_-,NA|206aa|down_6|NZ_CP025298.1_2596348_2596966_-	NA|295aa|up_9|NZ_CP025298.1_2575184_2576069_+	COG1276, PcoD, Putative copper export protein [Inorganic ion transport and metabolism]	NA|233aa|up_8|NZ_CP025298.1_2576114_2576813_+	TIGR01387, Transcriptional_regulatory_protein_PcoR, heavy metal response regulator	NA|456aa|up_7|NZ_CP025298.1_2576809_2578177_+	TIGR01386, Probable_sensor_protein_PcoS, heavy metal sensor kinase	NA|314aa|up_6|NZ_CP025298.1_2578196_2579138_-	cd08472, PBP2_CrgA_like_3, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold	NA|248aa|up_5|NZ_CP025298.1_2579243_2579987_+	cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs	NA|1026aa|up_4|NZ_CP025298.1_2580128_2583206_-	COG3696, COG3696, Putative silver efflux pump [Inorganic ion transport and metabolism]	NA|391aa|up_3|NZ_CP025298.1_2583202_2584375_-	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|416aa|up_2|NZ_CP025298.1_2584371_2585619_-	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|225aa|up_1|NZ_CP025298.1_2585681_2586356_+	PRK10643, PRK10643, two-component system response regulator PmrA	NA|461aa|up_0|NZ_CP025298.1_2586348_2587731_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|784aa|down_0|NZ_CP025298.1_2587894_2590246_-	pfam07971, Glyco_hydro_92, Glycosyl hydrolase family 92	NA|61aa|down_1|NZ_CP025298.1_2590400_2590583_-	NA	NA|774aa|down_2|NZ_CP025298.1_2590595_2592917_+	PRK15313, PRK15313, intestinal colonization autotransporter adhesin MisL	NA|81aa|down_3|NZ_CP025298.1_2593332_2593575_+	cd05360, SDR_c3, classical (c) SDR, subgroup 3	NA|139aa|down_4|NZ_CP025298.1_2593788_2594205_-	pfam18856, baeRF_family12, Bacterial archaeo-eukaryotic release factor family 12	NA|496aa|down_5|NZ_CP025298.1_2594776_2596264_+	PRK10642, PRK10642, proline/glycine betaine transporter ProP	NA|206aa|down_6|NZ_CP025298.1_2596348_2596966_-	NA	NA|209aa|down_7|NZ_CP025298.1_2597075_2597702_-	COG4185, COG4185, Uncharacterized protein conserved in bacteria [Function unknown]	NA|114aa|down_8|NZ_CP025298.1_2597705_2598047_-	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system	NA|528aa|down_9|NZ_CP025298.1_2598117_2599701_-	COG3920, COG3920, Signal transduction histidine kinase [Signal transduction mechanisms]
GCF_002847385.1_ASM284738v1	NZ_CP025298	Stenotrophomonas maltophilia strain CSM2 chromosome, complete genome	4	2669883-2669989	4	CRISPRCasFinder	no	csa3	cas3,DEDDh,csa3,WYL,Cas9_archaeal,DinG	Type I-A	GTAGAGCCACGCCATGCGTGGCTGCA	26	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,WYL,Cas9_archaeal,DinG	NA|122aa|up_1|NZ_CP025298.1_2668868_2669234_-,NA|135aa|down_5|NZ_CP025298.1_2674191_2674596_+,NA|110aa|down_6|NZ_CP025298.1_2674589_2674919_-,NA|125aa|down_7|NZ_CP025298.1_2675487_2675862_+,NA|112aa|down_8|NZ_CP025298.1_2675907_2676243_-,NA|126aa|down_9|NZ_CP025298.1_2676451_2676829_-	NA|405aa|up_9|NZ_CP025298.1_2656934_2658149_-	PRK09249, PRK09249, coproporphyrinogen dehydrogenase	NA|444aa|up_8|NZ_CP025298.1_2658290_2659622_-	COG2223, NarK, Nitrate/nitrite transporter [Inorganic ion transport and metabolism]	NA|300aa|up_7|NZ_CP025298.1_2659645_2660545_-	TIGR02933, Putative_peptidyl-prolyl_cis-trans_isomerase_NifM, nitrogen fixation protein NifM	NA|236aa|up_6|NZ_CP025298.1_2660548_2661256_-	pfam02665, Nitrate_red_gam, Nitrate reductase gamma subunit	NA|227aa|up_5|NZ_CP025298.1_2661252_2661933_-	PRK15054, PRK15054, nitrate reductase molybdenum cofactor assembly chaperone	NA|515aa|up_4|NZ_CP025298.1_2661932_2663477_-	COG1140, NarY, Nitrate reductase beta subunit [Energy production and conversion]	NA|1252aa|up_3|NZ_CP025298.1_2663476_2667232_-	COG5013, NarG, Nitrate reductase alpha subunit [Energy production and conversion]	NA|473aa|up_2|NZ_CP025298.1_2667304_2668723_-	PRK15034, PRK15034, nitrate/nitrite transport protein NarU; Provisional	NA|122aa|up_1|NZ_CP025298.1_2668868_2669234_-	NA	NA|181aa|up_0|NZ_CP025298.1_2669230_2669773_-	cd02503, MobA, MobA catalyzes the formation of molybdopterin guanine dinucleotide	NA|167aa|down_0|NZ_CP025298.1_2669995_2670496_-	cd00756, MoaE, MoaE family	NA|87aa|down_1|NZ_CP025298.1_2670499_2670760_-	COG1977, MoaD, Molybdopterin converting factor, small subunit [Coenzyme metabolism]	NA|418aa|down_2|NZ_CP025298.1_2670759_2672013_-	cd00887, MoeA, MoeA family	NA|332aa|down_3|NZ_CP025298.1_2672012_2673008_-	PRK03604, moaC, bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA; Provisional	NA|327aa|down_4|NZ_CP025298.1_2673016_2673997_-	PRK00164, moaA, GTP 3',8-cyclase MoaA	NA|135aa|down_5|NZ_CP025298.1_2674191_2674596_+	NA	NA|110aa|down_6|NZ_CP025298.1_2674589_2674919_-	NA	NA|125aa|down_7|NZ_CP025298.1_2675487_2675862_+	NA	NA|112aa|down_8|NZ_CP025298.1_2675907_2676243_-	NA	NA|126aa|down_9|NZ_CP025298.1_2676451_2676829_-	NA
GCF_002847385.1_ASM284738v1	NZ_CP025298	Stenotrophomonas maltophilia strain CSM2 chromosome, complete genome	5	3092945-3093051	5	CRISPRCasFinder	no		cas3,DEDDh,csa3,WYL,Cas9_archaeal,DinG	Orphan	CATCCACGCACGGCGTGGATCTAC	24	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,WYL,Cas9_archaeal,DinG	NA|112aa|up_7|NZ_CP025298.1_3083586_3083922_-,NA	NA|114aa|up_9|NZ_CP025298.1_3082478_3082820_+	cd03034, ArsC_ArsC, Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli	NA|212aa|up_8|NZ_CP025298.1_3082893_3083529_-	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|112aa|up_7|NZ_CP025298.1_3083586_3083922_-	NA	NA|506aa|up_6|NZ_CP025298.1_3084046_3085564_-	COG1951, TtdA, Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain [Energy production and conversion]	NA|299aa|up_5|NZ_CP025298.1_3085711_3086608_+	TIGR02957, putative_sigma_factor, RNA polymerase sigma-70 factor, TIGR02957 family	NA|150aa|up_4|NZ_CP025298.1_3086644_3087094_+	COG2128, COG2128, Uncharacterized conserved protein [Function unknown]	NA|624aa|up_3|NZ_CP025298.1_3087331_3089203_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|260aa|up_2|NZ_CP025298.1_3089282_3090062_+	cd06195, FNR1, Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin	NA|160aa|up_1|NZ_CP025298.1_3090105_3090585_-	COG0386, BtuE, Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones]	NA|723aa|up_0|NZ_CP025298.1_3090715_3092884_+	cd06456, M3A_DCP, Peptidase family M3, dipeptidyl carboxypeptidase (DCP)	NA|372aa|down_0|NZ_CP025298.1_3093057_3094173_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|294aa|down_1|NZ_CP025298.1_3094192_3095074_-	pfam13739, DUF4163, Domain of unknown function (DUF4163)	NA|101aa|down_2|NZ_CP025298.1_3095111_3095414_-	pfam14542, Acetyltransf_CG, GCN5-related N-acetyl-transferase	NA|209aa|down_3|NZ_CP025298.1_3095828_3096455_-	COG0705, COG0705, Membrane associated serine protease [Amino acid transport and metabolism]	NA|522aa|down_4|NZ_CP025298.1_3096462_3098028_-	cd17347, MFS_SLC15A1_2_like, Solute carrier family 15 members 1 and 2, and similar Major Facilitator Superfamily transporters	NA|283aa|down_5|NZ_CP025298.1_3098190_3099039_+	pfam03372, Exo_endo_phos, Endonuclease/Exonuclease/phosphatase family	NA|204aa|down_6|NZ_CP025298.1_3099142_3099754_-	COG0605, SodA, Superoxide dismutase [Inorganic ion transport and metabolism]	NA|151aa|down_7|NZ_CP025298.1_3099973_3100426_+	cd00607, RNase_Sa, RNase_Sa	NA|138aa|down_8|NZ_CP025298.1_3100425_3100839_+	cd05141, Barstar_evA4336-like, Barstar_evA4336-like contains uncharacterized sequences similar to the uncharacterized, predicted RNAase inhibitor evA4336 found in Azoarcus sp	NA|587aa|down_9|NZ_CP025298.1_3100971_3102732_-	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated
GCF_002847385.1_ASM284738v1	NZ_CP025298	Stenotrophomonas maltophilia strain CSM2 chromosome, complete genome	6	3353125-3353211	6	CRISPRCasFinder	no		cas3,DEDDh,csa3,WYL,Cas9_archaeal,DinG	Orphan	GCCATCCACGCATGGCGTGGATC	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,WYL,Cas9_archaeal,DinG	NA,NA	NA|528aa|up_9|NZ_CP025298.1_3343180_3344764_+	COG1233, COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]	NA|225aa|up_8|NZ_CP025298.1_3344813_3345488_-	COG0705, COG0705, Membrane associated serine protease [Amino acid transport and metabolism]	NA|103aa|up_7|NZ_CP025298.1_3345581_3345890_-	COG3695, COG3695, Predicted methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair]	NA|307aa|up_6|NZ_CP025298.1_3345916_3346837_-	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|453aa|up_5|NZ_CP025298.1_3347021_3348380_-	PRK06116, PRK06116, glutathione reductase; Validated	NA|417aa|up_4|NZ_CP025298.1_3348376_3349627_-	PRK00711, PRK00711, D-amino acid dehydrogenase	NA|415aa|up_3|NZ_CP025298.1_3349630_3350875_-	COG2311, COG2311, Predicted membrane protein [Function unknown]	NA|161aa|up_2|NZ_CP025298.1_3350974_3351457_-	COG1047, SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 [Posttranslational modification, protein turnover, chaperones]	NA|180aa|up_1|NZ_CP025298.1_3351568_3352108_+	COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane]	NA|258aa|up_0|NZ_CP025298.1_3352239_3353013_+	COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane]	NA|445aa|down_0|NZ_CP025298.1_3353302_3354637_-	pfam00375, SDF, Sodium:dicarboxylate symporter family	NA|569aa|down_1|NZ_CP025298.1_3354791_3356498_+	smart00098, alkPPc, Alkaline phosphatase homologues	NA|182aa|down_2|NZ_CP025298.1_3356494_3357040_+	pfam14903, WG_beta_rep, WG containing repeat	NA|35aa|down_3|NZ_CP025298.1_3357358_3357463_-	pfam00665, rve, Integrase core domain	NA|111aa|down_4|NZ_CP025298.1_3357596_3357929_-	pfam13276, HTH_21, HTH-like domain	NA|443aa|down_5|NZ_CP025298.1_3358773_3360102_+	PRK10660, tilS, tRNA(Ile)-lysidine synthetase; Provisional	NA|87aa|down_6|NZ_CP025298.1_3360138_3360399_+	PRK00977, PRK00977, exodeoxyribonuclease VII small subunit; Provisional	NA|293aa|down_7|NZ_CP025298.1_3360388_3361267_+	PRK10581, PRK10581, (2E,6E)-farnesyl diphosphate synthase	NA|124aa|down_8|NZ_CP025298.1_3361354_3361726_-	pfam09685, DUF4870, Domain of unknown function (DUF4870)	NA|456aa|down_9|NZ_CP025298.1_3361813_3363181_-	PRK11040, PRK11040, peptidase PmbA; Provisional
GCF_002847385.1_ASM284738v1	NZ_CP025298	Stenotrophomonas maltophilia strain CSM2 chromosome, complete genome	7	3779066-3779142	7	CRISPRCasFinder	no	cas3	cas3,DEDDh,csa3,WYL,Cas9_archaeal,DinG	Unclear	GAAGAGCGTGCCAACCAAGGTTGGCA	26	0	0	NA	NA	NA	1	1	Unclear	cas3,DEDDh,csa3,WYL,Cas9_archaeal,DinG	NA|215aa|up_8|NZ_CP025298.1_3766312_3766957_+,NA|248aa|up_7|NZ_CP025298.1_3767301_3768045_-,NA	NA|808aa|up_9|NZ_CP025298.1_3763633_3766057_+	COG5009, MrcA, Membrane carboxypeptidase/penicillin-binding protein [Cell envelope biogenesis, outer membrane]	NA|215aa|up_8|NZ_CP025298.1_3766312_3766957_+	NA	NA|248aa|up_7|NZ_CP025298.1_3767301_3768045_-	NA	NA|1174aa|up_6|NZ_CP025298.1_3768114_3771636_-	cd12820, LbR_YadA-like, YadA-like, left-handed beta-roll	NA|236aa|up_5|NZ_CP025298.1_3771694_3772402_-	PRK15308, PRK15308, fimbrial protein TcfA	NA|378aa|up_4|NZ_CP025298.1_3772420_3773554_-	pfam07434, CblD, CblD like pilus biogenesis initiator	NA|897aa|up_3|NZ_CP025298.1_3773594_3776285_-	PRK15310, PRK15310, fimbrial outer membrane usher protein TcfC; Provisional	NA|170aa|up_2|NZ_CP025298.1_3776336_3776846_-	pfam04449, Fimbrial_CS1, CS1 type fimbrial major subunit	NA|121aa|up_1|NZ_CP025298.1_3777182_3777545_-	COG3111, COG3111, Periplasmic protein with OB-fold [Function unknown]	NA|357aa|up_0|NZ_CP025298.1_3777887_3778958_-	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|426aa|down_0|NZ_CP025298.1_3779213_3780491_-	PRK05614, gltA, citrate synthase	NA|81aa|down_1|NZ_CP025298.1_3780787_3781030_-	PRK01678, rpmE2, type B 50S ribosomal protein L31	NA|313aa|down_2|NZ_CP025298.1_3781118_3782057_-	cd02649, nuc_hydro_CeIAG, nuc_hydro_CeIAG: Nucleoside hydrolases similar to the inosine-adenosine-guanosine-preferring nucleoside hydrolase from Caenorhabditis elegans	cas3|704aa|down_3|NZ_CP025298.1_3782520_3784632_-	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional	NA|129aa|down_4|NZ_CP025298.1_3784639_3785026_-	TIGR00004, RutC_family_protein, reactive intermediate/imine deaminase	NA|721aa|down_5|NZ_CP025298.1_3785315_3787478_-	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription]	NA|100aa|down_6|NZ_CP025298.1_3787584_3787884_-	PRK00392, rpoZ, DNA-directed RNA polymerase subunit omega; Reviewed	NA|222aa|down_7|NZ_CP025298.1_3787994_3788660_-	PRK00300, gmk, guanylate kinase; Provisional	NA|1023aa|down_8|NZ_CP025298.1_3788950_3792019_+	TIGR01553, Formate_dehydrogenase_major_subunit, formate dehydrogenase-N alpha subunit	NA|306aa|down_9|NZ_CP025298.1_3792029_3792947_+	TIGR01582, Formate_dehydrogenase_iron-sulfur_subunit, formate dehydrogenase, beta subunit, Fe-S containing
GCF_002847385.1_ASM284738v1	NZ_CP025298	Stenotrophomonas maltophilia strain CSM2 chromosome, complete genome	8	3914455-3914537	8	CRISPRCasFinder	no		cas3,DEDDh,csa3,WYL,Cas9_archaeal,DinG	Orphan	GGTTGGCACCTACCATGAGCAGGCA	25	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,WYL,Cas9_archaeal,DinG	NA,NA	NA|881aa|up_9|NZ_CP025298.1_3899614_3902257_+	COG4191, COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms]	NA|217aa|up_8|NZ_CP025298.1_3902816_3903467_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|352aa|up_7|NZ_CP025298.1_3903495_3904551_-	COG1840, AfuA, ABC-type Fe3+ transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|464aa|up_6|NZ_CP025298.1_3904547_3905939_-	PRK10337, PRK10337, sensor protein QseC; Provisional	NA|230aa|up_5|NZ_CP025298.1_3905931_3906621_-	PRK15479, PRK15479, transcriptional regulator TctD	NA|380aa|up_4|NZ_CP025298.1_3906863_3908003_+	COG3746, OprP, Phosphate-selective porin [Inorganic ion transport and metabolism]	NA|443aa|up_3|NZ_CP025298.1_3908078_3909407_+	COG2851, CitM, H+/citrate symporter [Energy production and conversion]	NA|247aa|up_2|NZ_CP025298.1_3909431_3910172_+	PRK12938, PRK12938, 3-ketoacyl-ACP reductase	NA|766aa|up_1|NZ_CP025298.1_3910400_3912698_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|418aa|up_0|NZ_CP025298.1_3913136_3914390_-	pfam08014, DUF1704, Domain of unknown function (DUF1704)	NA|370aa|down_0|NZ_CP025298.1_3914627_3915737_-	PRK01889, PRK01889, GTPase RsgA; Reviewed	NA|425aa|down_1|NZ_CP025298.1_3915851_3917126_+	PRK09265, PRK09265, aminotransferase AlaT; Validated	NA|206aa|down_2|NZ_CP025298.1_3917129_3917747_+	cd01832, SGNH_hydrolase_like_1, Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases	NA|240aa|down_3|NZ_CP025298.1_3917751_3918471_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|260aa|down_4|NZ_CP025298.1_3918515_3919295_-	cd10917, CE4_NodB_like_6s_7s, Catalytic NodB homology domain of rhizobial NodB-like proteins	NA|309aa|down_5|NZ_CP025298.1_3919354_3920281_+	TIGR00365, TIGR00365, monothiol glutaredoxin, Grx4 family	NA|180aa|down_6|NZ_CP025298.1_3920355_3920895_-	COG3803, COG3803, Uncharacterized protein conserved in bacteria [Function unknown]	NA|259aa|down_7|NZ_CP025298.1_3920938_3921715_-	PRK07115, PRK07115, AMP nucleosidase; Provisional	NA|470aa|down_8|NZ_CP025298.1_3921873_3923283_+	cd01309, Met_dep_hydrolase_C, Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site	NA|421aa|down_9|NZ_CP025298.1_3923282_3924545_+	cd01309, Met_dep_hydrolase_C, Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site
