assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002850235.1_ASM285023v1	NZ_CP019600	Brachyspira hyodysenteriae strain BH718 chromosome, complete genome	1	287082-287174	1	CRISPRCasFinder	no		WYL,DinG,cas4,csa3,RT	Orphan	GAGGAAGTATCAAATAAAGATTCAGAG	27	0	0	NA	NA	NA	1	1	Orphan	WYL,DinG,cas4,csa3,RT	NA|204aa|up_5|NZ_CP019600.1_260106_260718_-,NA|677aa|up_0|NZ_CP019600.1_265454_267485_-,NA|247aa|down_0|NZ_CP019600.1_291766_292507_-,NA|274aa|down_1|NZ_CP019600.1_292509_293331_-	NA|233aa|up_9|NZ_CP019600.1_255177_255876_+	TIGR03725, T6A_YeaZ, tRNA threonylcarbamoyl adenosine modification protein YeaZ	NA|704aa|up_8|NZ_CP019600.1_256024_258136_+	PRK15041, PRK15041, methyl-accepting chemotaxis protein	NA|343aa|up_7|NZ_CP019600.1_258210_259239_-	PRK11784, PRK11784, tRNA 2-selenouridine synthase; Provisional	NA|225aa|up_6|NZ_CP019600.1_259299_259974_-	COG1272, COG1272, Predicted membrane protein, hemolysin III homolog [General function prediction only]	NA|204aa|up_5|NZ_CP019600.1_260106_260718_-	NA	NA|330aa|up_4|NZ_CP019600.1_260922_261912_+	COG1774, COG1774, Uncharacterized homolog of PSP1 [Function unknown]	NA|333aa|up_3|NZ_CP019600.1_262016_263015_+	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed	NA|336aa|up_2|NZ_CP019600.1_263092_264100_-	pfam02618, YceG, YceG-like family	NA|417aa|up_1|NZ_CP019600.1_264177_265428_-	PRK00037, hisS, histidyl-tRNA synthetase; Reviewed	NA|677aa|up_0|NZ_CP019600.1_265454_267485_-	NA	NA|247aa|down_0|NZ_CP019600.1_291766_292507_-	NA	NA|274aa|down_1|NZ_CP019600.1_292509_293331_-	NA	NA|145aa|down_2|NZ_CP019600.1_293377_293812_-	PRK00601, dut, dUTP diphosphatase	NA|461aa|down_3|NZ_CP019600.1_293860_295243_-	pfam02447, GntP_permease, GntP family permease	NA|104aa|down_4|NZ_CP019600.1_295282_295594_-	pfam00381, PTS-HPr, PTS HPr component phosphorylation site	NA|302aa|down_5|NZ_CP019600.1_295753_296659_-	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial	NA|340aa|down_6|NZ_CP019600.1_296842_297862_-	TIGR01444, 2-O-methyltransferase_NoeI, methyltransferase, FkbM family	NA|1939aa|down_7|NZ_CP019600.1_298223_304040_+	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|380aa|down_8|NZ_CP019600.1_304226_305366_-	pfam11738, DUF3298, Protein of unknown function (DUF3298)	NA|606aa|down_9|NZ_CP019600.1_305488_307306_-	PRK15041, PRK15041, methyl-accepting chemotaxis protein
GCF_002850235.1_ASM285023v1	NZ_CP019600	Brachyspira hyodysenteriae strain BH718 chromosome, complete genome	2	647316-647939	2	CRISPRCasFinder	no		WYL,DinG,cas4,csa3,RT	Orphan	CCAATTATTTAAAGGCTGATTAAA	24	0	0	NA	NA	NA	8	8	Orphan	WYL,DinG,cas4,csa3,RT	NA|184aa|up_8|NZ_CP019600.1_632551_633103_+,NA|343aa|up_3|NZ_CP019600.1_639171_640200_-,NA|214aa|down_8|NZ_CP019600.1_664537_665179_-	NA|391aa|up_9|NZ_CP019600.1_631352_632525_+	sd00006, TPR, Tetratricopeptide repeat	NA|184aa|up_8|NZ_CP019600.1_632551_633103_+	NA	NA|301aa|up_7|NZ_CP019600.1_633105_634008_-	cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate	NA|635aa|up_6|NZ_CP019600.1_634025_635930_-	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane]	NA|542aa|up_5|NZ_CP019600.1_636330_637956_-	cd08504, PBP2_OppA, The substrate-binding component of an ABC-type oligopetide import system contains the type 2 periplasmic binding fold	NA|332aa|up_4|NZ_CP019600.1_638052_639048_-	cd12185, HGDH_LDH_like, Putative Lactate dehydrogenase and (R)-2-Hydroxyglutarate Dehydrogenase-like proteins, NAD-binding and catalytic domains	NA|343aa|up_3|NZ_CP019600.1_639171_640200_-	NA	NA|231aa|up_2|NZ_CP019600.1_640387_641080_+	sd00006, TPR, Tetratricopeptide repeat	NA|565aa|up_1|NZ_CP019600.1_641117_642812_+	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair]	NA|864aa|up_0|NZ_CP019600.1_642882_645474_-	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	NA|796aa|down_0|NZ_CP019600.1_648567_650955_-	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	NA|289aa|down_1|NZ_CP019600.1_651189_652056_-	pfam12784, PDDEXK_2, PD-(D/E)XK nuclease family transposase	NA|805aa|down_2|NZ_CP019600.1_652163_654578_-	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	NA|858aa|down_3|NZ_CP019600.1_654937_657511_-	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	NA|452aa|down_4|NZ_CP019600.1_657752_659108_-	pfam03358, FMN_red, NADPH-dependent FMN reductase	NA|221aa|down_5|NZ_CP019600.1_659248_659911_-	PRK08087, PRK08087, L-fuculose-phosphate aldolase	NA|540aa|down_6|NZ_CP019600.1_660173_661793_-	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism]	NA|685aa|down_7|NZ_CP019600.1_662324_664379_-	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|214aa|down_8|NZ_CP019600.1_664537_665179_-	NA	NA|51aa|down_9|NZ_CP019600.1_665180_665333_-	COG1397, DraG, ADP-ribosylglycohydrolase [Posttranslational modification, protein turnover, chaperones]
GCF_002850235.1_ASM285023v1	NZ_CP019600	Brachyspira hyodysenteriae strain BH718 chromosome, complete genome	3	1173753-1174085	3	CRISPRCasFinder	no		WYL,DinG,cas4,csa3,RT	Orphan	AAAGCTGAGGCAGATGCAAAAGCT	24	0	0	NA	NA	NA	5	5	Orphan	WYL,DinG,cas4,csa3,RT	NA|72aa|up_9|NZ_CP019600.1_1162986_1163202_+,NA|178aa|up_6|NZ_CP019600.1_1165730_1166264_-,NA|207aa|up_0|NZ_CP019600.1_1172503_1173124_+,NA|110aa|down_2|NZ_CP019600.1_1178674_1179004_-	NA|72aa|up_9|NZ_CP019600.1_1162986_1163202_+	NA	NA|104aa|up_8|NZ_CP019600.1_1163445_1163757_+	COG3937, COG3937, Uncharacterized conserved protein [Function unknown]	NA|560aa|up_7|NZ_CP019600.1_1163863_1165543_+	COG0661, AarF, Predicted unusual protein kinase [General function prediction only]	NA|178aa|up_6|NZ_CP019600.1_1165730_1166264_-	NA	NA|267aa|up_5|NZ_CP019600.1_1166423_1167224_+	pfam16258, DUF4912, Domain of unknown function (DUF4912)	NA|582aa|up_4|NZ_CP019600.1_1167297_1169043_-	cd13944, lytB_ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase	NA|64aa|up_3|NZ_CP019600.1_1169074_1169266_-	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed	NA|305aa|up_2|NZ_CP019600.1_1169663_1170578_+	cd00954, NAL, N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL)	NA|467aa|up_1|NZ_CP019600.1_1170822_1172223_+	PRK12831, PRK12831, putative oxidoreductase; Provisional	NA|207aa|up_0|NZ_CP019600.1_1172503_1173124_+	NA	NA|188aa|down_0|NZ_CP019600.1_1175377_1175941_+	pfam13930, Endonuclea_NS_2, DNA/RNA non-specific endonuclease	NA|829aa|down_1|NZ_CP019600.1_1176034_1178521_-	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones]	NA|110aa|down_2|NZ_CP019600.1_1178674_1179004_-	NA	NA|191aa|down_3|NZ_CP019600.1_1179000_1179573_-	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription]	NA|615aa|down_4|NZ_CP019600.1_1179653_1181498_-	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX	NA|441aa|down_5|NZ_CP019600.1_1181514_1182837_-	TIGR01125, Ribosomal_protein_S12_methylthiotransferase_RimO, ribosomal protein S12 methylthiotransferase RimO	NA|456aa|down_6|NZ_CP019600.1_1182902_1184270_-	pfam13413, HTH_25, Helix-turn-helix domain	NA|241aa|down_7|NZ_CP019600.1_1184284_1185007_-	COG2834, LolA, Outer membrane lipoprotein-sorting protein [Cell envelope biogenesis, outer membrane]	NA|79aa|down_8|NZ_CP019600.1_1185319_1185556_+	pfam11950, DUF3467, Protein of unknown function (DUF3467)	NA|124aa|down_9|NZ_CP019600.1_1185581_1185953_+	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation
GCF_002850235.1_ASM285023v1	NZ_CP019600	Brachyspira hyodysenteriae strain BH718 chromosome, complete genome	4	1376082-1376257	1	PILER-CR	no		WYL,DinG,cas4,csa3,RT	Orphan	ATGAAGATAATGATGAAGATGAAAAAATAAAATTAGAAAAT	41	0	0	NA	NA	NA	2	2	Orphan	WYL,DinG,cas4,csa3,RT	NA|111aa|up_6|NZ_CP019600.1_1366667_1367000_+,NA|338aa|up_4|NZ_CP019600.1_1368257_1369271_-,NA|119aa|up_3|NZ_CP019600.1_1369552_1369909_+,NA|88aa|down_0|NZ_CP019600.1_1378461_1378725_+	NA|2928aa|up_9|NZ_CP019600.1_1356882_1365666_-	COG5271, MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only]	NA|106aa|up_8|NZ_CP019600.1_1365668_1365986_-	pfam10531, SLBB, SLBB domain	NA|158aa|up_7|NZ_CP019600.1_1366189_1366663_+	cd17906, CheX, chemotaxis phosphatase CheX	NA|111aa|up_6|NZ_CP019600.1_1366667_1367000_+	NA	NA|380aa|up_5|NZ_CP019600.1_1367001_1368141_-	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms]	NA|338aa|up_4|NZ_CP019600.1_1368257_1369271_-	NA	NA|119aa|up_3|NZ_CP019600.1_1369552_1369909_+	NA	NA|597aa|up_2|NZ_CP019600.1_1369903_1371694_-	COG5000, NtrY, Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms]	NA|201aa|up_1|NZ_CP019600.1_1371704_1372307_-	cd02603, HAD_sEH-N_like, N-terminal lipase phosphatase domain of human soluble epoxide hydrolase, Escherichia coli YihX/HAD4 alpha-D-glucose 1-phosphate phosphatase, and related domains, may be inactive	NA|701aa|up_0|NZ_CP019600.1_1372819_1374922_+	PTZ00341, PTZ00341, Ring-infected erythrocyte surface antigen; Provisional	NA|88aa|down_0|NZ_CP019600.1_1378461_1378725_+	NA	NA|266aa|down_1|NZ_CP019600.1_1378737_1379535_+	cd01086, MetAP1, Methionine Aminopeptidase 1	NA|370aa|down_2|NZ_CP019600.1_1379656_1380766_+	pfam01264, Chorismate_synt, Chorismate synthase	NA|465aa|down_3|NZ_CP019600.1_1380850_1382245_+	TIGR02692, putative_tRNA_nucleotidyltransferase, tRNA adenylyltransferase	NA|261aa|down_4|NZ_CP019600.1_1382247_1383030_+	pfam03309, Pan_kinase, Type III pantothenate kinase	NA|89aa|down_5|NZ_CP019600.1_1383221_1383488_+	pfam00381, PTS-HPr, PTS HPr component phosphorylation site	NA|582aa|down_6|NZ_CP019600.1_1383519_1385265_+	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]	NA|291aa|down_7|NZ_CP019600.1_1385330_1386203_-	COG1092, COG1092, Predicted SAM-dependent methyltransferases [General function prediction only]	NA|267aa|down_8|NZ_CP019600.1_1386218_1387019_-	PRK06667, motB, flagellar motor protein MotB; Validated	NA|264aa|down_9|NZ_CP019600.1_1387037_1387829_-	COG1291, MotA, Flagellar motor component [Cell motility and secretion]
GCF_002850235.1_ASM285023v1	NZ_CP019600	Brachyspira hyodysenteriae strain BH718 chromosome, complete genome	5	1598348-1598465	4	CRISPRCasFinder	no		WYL,DinG,cas4,csa3,RT	Orphan	AATAAAGATCCTCTAAATCCTTATTATTC	29	0	0	NA	NA	NA	1	1	Orphan	WYL,DinG,cas4,csa3,RT	NA|107aa|up_8|NZ_CP019600.1_1587689_1588010_+,NA|142aa|down_7|NZ_CP019600.1_1608286_1608712_+,NA|180aa|down_8|NZ_CP019600.1_1608799_1609339_-	NA|111aa|up_9|NZ_CP019600.1_1587342_1587675_+	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation	NA|107aa|up_8|NZ_CP019600.1_1587689_1588010_+	NA	NA|713aa|up_7|NZ_CP019600.1_1588018_1590157_+	sd00006, TPR, Tetratricopeptide repeat	NA|70aa|up_6|NZ_CP019600.1_1590214_1590424_+	TIGR03980, conserved_hypothetical_protein, hybrid cluster protein-associated redox disulfide domain	NA|249aa|up_5|NZ_CP019600.1_1590486_1591233_-	pfam11306, DUF3108, Protein of unknown function (DUF3108)	NA|290aa|up_4|NZ_CP019600.1_1591765_1592635_+	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|373aa|up_3|NZ_CP019600.1_1592665_1593784_+	pfam07728, AAA_5, AAA domain (dynein-related subfamily)	NA|387aa|up_2|NZ_CP019600.1_1594114_1595275_+	pfam05540, Serpulina_VSP, Serpulina hyodysenteriae variable surface protein	NA|381aa|up_1|NZ_CP019600.1_1595645_1596788_+	pfam05540, Serpulina_VSP, Serpulina hyodysenteriae variable surface protein	NA|362aa|up_0|NZ_CP019600.1_1596997_1598083_+	pfam05540, Serpulina_VSP, Serpulina hyodysenteriae variable surface protein	NA|393aa|down_0|NZ_CP019600.1_1598615_1599794_+	pfam05540, Serpulina_VSP, Serpulina hyodysenteriae variable surface protein	NA|334aa|down_1|NZ_CP019600.1_1600001_1601003_+	pfam12784, PDDEXK_2, PD-(D/E)XK nuclease family transposase	NA|720aa|down_2|NZ_CP019600.1_1601008_1603168_-	TIGR00644, recJ, single-stranded-DNA-specific exonuclease RecJ	NA|393aa|down_3|NZ_CP019600.1_1603332_1604511_+	TIGR00990, Mitochondrial_import_receptor_subunit_TOM70, mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70)	NA|169aa|down_4|NZ_CP019600.1_1604882_1605389_-	cd04692, Nudix_Hydrolase_33, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|269aa|down_5|NZ_CP019600.1_1605500_1606307_-	cd08770, DAP_dppA_3, Peptidase M55, D-aminopeptidase dipeptide-binding protein family	NA|402aa|down_6|NZ_CP019600.1_1606752_1607958_-	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|142aa|down_7|NZ_CP019600.1_1608286_1608712_+	NA	NA|180aa|down_8|NZ_CP019600.1_1608799_1609339_-	NA	NA|329aa|down_9|NZ_CP019600.1_1609494_1610481_+	cd19089, AKR_AKR14A1_2, AKR14A family of aldo-keto reductase (AKR)
GCF_002850235.1_ASM285023v1	NZ_CP019600	Brachyspira hyodysenteriae strain BH718 chromosome, complete genome	6	1848541-1848629	5	CRISPRCasFinder	no		WYL,DinG,cas4,csa3,RT	Orphan	ATTATGATGACTATGAAGATGATTAT	26	0	0	NA	NA	NA	1	1	Orphan	WYL,DinG,cas4,csa3,RT	NA|167aa|up_8|NZ_CP019600.1_1838100_1838601_-,NA|373aa|up_7|NZ_CP019600.1_1838839_1839958_+,NA|106aa|up_2|NZ_CP019600.1_1845668_1845986_-,NA|67aa|up_0|NZ_CP019600.1_1848060_1848261_+,NA|171aa|down_0|NZ_CP019600.1_1848864_1849377_+,NA|58aa|down_3|NZ_CP019600.1_1851666_1851840_-,NA|532aa|down_8|NZ_CP019600.1_1858270_1859866_-,NA|265aa|down_9|NZ_CP019600.1_1859880_1860675_-	NA|181aa|up_9|NZ_CP019600.1_1837565_1838108_-	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only]	NA|167aa|up_8|NZ_CP019600.1_1838100_1838601_-	NA	NA|373aa|up_7|NZ_CP019600.1_1838839_1839958_+	NA	NA|299aa|up_6|NZ_CP019600.1_1840246_1841143_-	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|660aa|up_5|NZ_CP019600.1_1841362_1843342_+	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA	NA|219aa|up_4|NZ_CP019600.1_1843685_1844342_+	COG0266, Nei, Formamidopyrimidine-DNA glycosylase [DNA replication, recombination, and repair]	NA|276aa|up_3|NZ_CP019600.1_1844411_1845239_-	COG2221, DsrA, Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits [Energy production and conversion]	NA|106aa|up_2|NZ_CP019600.1_1845668_1845986_-	NA	NA|538aa|up_1|NZ_CP019600.1_1846148_1847762_-	cd08504, PBP2_OppA, The substrate-binding component of an ABC-type oligopetide import system contains the type 2 periplasmic binding fold	NA|67aa|up_0|NZ_CP019600.1_1848060_1848261_+	NA	NA|171aa|down_0|NZ_CP019600.1_1848864_1849377_+	NA	NA|428aa|down_1|NZ_CP019600.1_1849943_1851227_-	PRK01117, PRK01117, adenylosuccinate synthetase; Provisional	NA|87aa|down_2|NZ_CP019600.1_1851409_1851670_-	pfam06769, YoeB_toxin, YoeB-like toxin of bacterial type II toxin-antitoxin system	NA|58aa|down_3|NZ_CP019600.1_1851666_1851840_-	NA	NA|772aa|down_4|NZ_CP019600.1_1852119_1854435_+	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|435aa|down_5|NZ_CP019600.1_1854495_1855800_+	PRK11331, PRK11331, 5-methylcytosine-specific restriction enzyme subunit McrB; Provisional	NA|352aa|down_6|NZ_CP019600.1_1855994_1857050_+	PRK09736, PRK09736, 5-methylcytosine-specific restriction enzyme subunit McrC; Provisional	NA|388aa|down_7|NZ_CP019600.1_1857070_1858234_-	COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]	NA|532aa|down_8|NZ_CP019600.1_1858270_1859866_-	NA	NA|265aa|down_9|NZ_CP019600.1_1859880_1860675_-	NA
GCF_002850235.1_ASM285023v1	NZ_CP019600	Brachyspira hyodysenteriae strain BH718 chromosome, complete genome	7	2254717-2254813	6	CRISPRCasFinder	no		WYL,DinG,cas4,csa3,RT	Orphan	CAATTTTTATTAGCAACAATATAAAA	26	0	0	NA	NA	NA	1	1	Orphan	WYL,DinG,cas4,csa3,RT	NA,NA	NA|243aa|up_9|NZ_CP019600.1_2246209_2246938_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|112aa|up_8|NZ_CP019600.1_2247233_2247569_+	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation	NA|304aa|up_7|NZ_CP019600.1_2247712_2248624_+	pfam00119, ATP-synt_A, ATP synthase A chain	NA|74aa|up_6|NZ_CP019600.1_2248660_2248882_+	cd18121, ATP-synt_Fo_c, membrane-bound Fo complex of F-ATP synthase, subunit c	NA|168aa|up_5|NZ_CP019600.1_2248917_2249421_+	cd06503, ATP-synt_Fo_b, F-type ATP synthase, membrane subunit b	NA|183aa|up_4|NZ_CP019600.1_2249457_2250006_+	pfam00213, OSCP, ATP synthase delta (OSCP) subunit	NA|214aa|up_3|NZ_CP019600.1_2250031_2250673_+	pfam00213, OSCP, ATP synthase delta (OSCP) subunit	NA|500aa|up_2|NZ_CP019600.1_2250699_2252199_+	PRK09281, PRK09281, F0F1 ATP synthase subunit alpha; Validated	NA|293aa|up_1|NZ_CP019600.1_2252262_2253141_+	pfam00231, ATP-synt, ATP synthase	NA|247aa|up_0|NZ_CP019600.1_2253783_2254524_+	sd00045, ANK, ankyrin repeats	NA|255aa|down_0|NZ_CP019600.1_2254871_2255636_+	sd00045, ANK, ankyrin repeats	NA|254aa|down_1|NZ_CP019600.1_2255863_2256625_+	sd00045, ANK, ankyrin repeats	NA|237aa|down_2|NZ_CP019600.1_2256858_2257569_+	sd00045, ANK, ankyrin repeats	NA|303aa|down_3|NZ_CP019600.1_2257958_2258867_-	TIGR04470, hypothetical_protein_ALIPUT_00462, radical SAM mobile pair protein B	NA|393aa|down_4|NZ_CP019600.1_2259073_2260252_+	pfam01139, RtcB, tRNA-splicing ligase RtcB	NA|720aa|down_5|NZ_CP019600.1_2260534_2262694_+	TIGR02002, PTS_system_glucose-specific_IIABC_component, PTS system, glucose-specific IIBC component	NA|602aa|down_6|NZ_CP019600.1_2262851_2264657_+	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|180aa|down_7|NZ_CP019600.1_2264711_2265251_-	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|123aa|down_8|NZ_CP019600.1_2265940_2266309_+	pfam04342, DMT_6, Putative member of DMT superfamily (DUF486)	NA|492aa|down_9|NZ_CP019600.1_2266397_2267873_-	pfam13623, SurA_N_2, SurA N-terminal domain
GCF_002850235.1_ASM285023v1	NZ_CP019600	Brachyspira hyodysenteriae strain BH718 chromosome, complete genome	8	2681510-2681609	7	CRISPRCasFinder	no		WYL,DinG,cas4,csa3,RT	Orphan	TTAATAAAAATATATCATTATAA	23	0	0	NA	NA	NA	1	1	Orphan	WYL,DinG,cas4,csa3,RT	NA,NA|68aa|down_7|NZ_CP019600.1_2690902_2691106_-	NA|965aa|up_9|NZ_CP019600.1_2666916_2669811_+	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|128aa|up_8|NZ_CP019600.1_2669923_2670307_+	pfam10135, Rod-binding, Rod binding protein	NA|150aa|up_7|NZ_CP019600.1_2670343_2670793_+	pfam10825, DUF2752, Protein of unknown function (DUF2752)	NA|447aa|up_6|NZ_CP019600.1_2670893_2672234_+	pfam00593, TonB_dep_Rec, TonB dependent receptor	NA|921aa|up_5|NZ_CP019600.1_2672289_2675052_+	PRK05755, PRK05755, DNA polymerase I; Provisional	NA|159aa|up_4|NZ_CP019600.1_2675727_2676204_+	pfam04229, GrpB, GrpB protein	NA|316aa|up_3|NZ_CP019600.1_2676376_2677324_-	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3	NA|717aa|up_2|NZ_CP019600.1_2677269_2679420_-	PRK05582, PRK05582, type I DNA topoisomerase	NA|425aa|up_1|NZ_CP019600.1_2679462_2680737_-	pfam02481, DNA_processg_A, DNA recombination-mediator protein A	NA|238aa|up_0|NZ_CP019600.1_2680733_2681447_-	sd00006, TPR, Tetratricopeptide repeat	NA|373aa|down_0|NZ_CP019600.1_2685117_2686236_+	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|330aa|down_1|NZ_CP019600.1_2686265_2687255_+	COG0859, RfaF, ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]	NA|217aa|down_2|NZ_CP019600.1_2687314_2687965_+	pfam00302, CAT, Chloramphenicol acetyltransferase	NA|414aa|down_3|NZ_CP019600.1_2688092_2689334_+	NF033164, lipo_LipL46, lipoprotein LipL46	NA|182aa|down_4|NZ_CP019600.1_2689344_2689890_+	pfam02677, DUF208, Uncharacterized BCR, COG1636	NA|121aa|down_5|NZ_CP019600.1_2689899_2690262_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|63aa|down_6|NZ_CP019600.1_2690465_2690654_-	pfam14070, YjfB_motility, Putative motility protein	NA|68aa|down_7|NZ_CP019600.1_2690902_2691106_-	NA	NA|563aa|down_8|NZ_CP019600.1_2691360_2693049_+	TIGR03385, Coenzyme_A_disulfide_reductase, CoA-disulfide reductase	NA|202aa|down_9|NZ_CP019600.1_2693236_2693842_+	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein
