The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP020714	Staphylococcus aureus strain K18 chromosome, complete genome	2731897	143077	184793	2731897	head,portal,tRNA,tail,terminase	Staphylococcus_phage(50.0%)	51	NA	NA
WP_001001521.1|143077_144622_+|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_000282386.1|144622_144988_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000842277.1|145014_145506_+	energy coupling factor transporter S component ThiW	NA	NA	NA	NA	NA
WP_000073352.1|145808_148427_+	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	23.7	8.5e-41
WP_000516264.1|148439_150449_+	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	30.7	2.8e-60
WP_001077635.1|150454_150997_+	glycerol-3-phosphate responsive antiterminator	NA	NA	NA	NA	NA
WP_001103743.1|151471_152290_+	aquaporin family protein	NA	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	35.1	2.4e-26
WP_000417369.1|152418_153915_+	glycerol kinase GlpK	NA	NA	NA	NA	NA
WP_001218596.1|154072_155746_+	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA	NA
WP_000136950.1|155895_156810_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_001548613.1|156827_157763_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_000561358.1|157777_158011_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_000448078.1|158232_158709_-	glutathione peroxidase	NA	Q70H87	Fowlpox_virus	38.0	1.2e-22
WP_101766551.1|158820_160059_+	GTPase HflX	NA	NA	NA	NA	NA
WP_000652047.1|160077_161316_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_000624945.1|161558_161927_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_001126603.1|161945_163286_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_001183750.1|164604_165300_-	hypothetical protein	NA	A0A2H4J5B8	uncultured_Caudovirales_phage	50.3	3.6e-07
WP_000554410.1|165311_165695_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000664917.1|165841_166234_-	helix-turn-helix domain-containing protein	NA	A0A2I6PE55	Staphylococcus_phage	53.6	1.6e-28
WP_001209962.1|166401_166620_+	DUF739 family protein	NA	A0A2I6PE94	Staphylococcus_phage	62.5	4.9e-19
WP_000932238.1|166646_166922_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000800341.1|167345_167552_-	hypothetical protein	NA	A1BTY8	Staphylococcus_virus	75.0	3.3e-25
WP_070977043.1|167612_168296_+	phage repressor protein	NA	A9CR56	Staphylococcus_phage	85.2	2.0e-106
WP_000072840.1|168394_168556_+	DUF1270 family protein	NA	R4IH12	Staphylococcus_phage	69.8	1.1e-12
WP_000786993.1|168642_168960_+	DUF2482 family protein	NA	W5RAK4	Staphylococcus_phage	80.6	1.6e-39
WP_000786634.1|168949_169216_+	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	53.6	3.0e-18
WP_001004327.1|169220_169757_+	hypothetical protein	NA	A0A0H3U480	Staphylococcus_phage	82.5	1.7e-76
WP_000907597.1|169757_170537_+	ATP-binding protein	NA	A0A1W6JPW0	Staphylococcus_phage	88.0	2.3e-127
WP_072433566.1|170617_171112_+	single-stranded DNA-binding protein	NA	A7TWM8	Staphylococcus_phage	94.0	6.4e-83
WP_000946005.1|172026_172317_+	hypothetical protein	NA	A0A223LIA9	Staphylococcus_phage	58.1	7.2e-18
WP_000714411.1|172331_172490_+	hypothetical protein	NA	A0A0E3T9L7	Staphylococcus_phage	90.4	6.7e-18
WP_000860978.1|172495_172807_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031587073.1|172799_173330_+	nucleotide pyrophosphohydrolase	NA	A0A1P8VVP1	Streptococcus_phage	39.1	2.3e-22
WP_106905708.1|173460_173568_+	DUF1381 domain-containing protein	NA	C8CH06	Staphylococcus_phage	87.5	1.2e-07
WP_101766550.1|173564_174029_+	hypothetical protein	NA	C9E2P0	Enterococcus_phage	42.4	6.1e-19
WP_000653931.1|174305_174794_+	hypothetical protein	NA	R9TMH4	Paenibacillus_phage	28.3	8.7e-08
WP_000090969.1|174946_175375_+	helix-turn-helix domain-containing protein	NA	A1EAE0	Streptococcus_phage	45.1	1.1e-25
WP_000207538.1|175361_176636_+|terminase	PBSX family phage terminase large subunit	terminase	Q4ZE37	Staphylococcus_virus	76.2	3.2e-195
WP_000158570.1|176648_178097_+|portal	phage portal protein	portal	Q4ZE36	Staphylococcus_virus	69.4	3.7e-195
WP_101766549.1|178086_178605_+	hypothetical protein	NA	A0A1J0MFV1	Staphylococcus_phage	55.3	4.7e-44
WP_078064796.1|178626_179616_+|head	head morphogenesis protein	head	Q4ZE35	Staphylococcus_virus	68.9	3.8e-50
WP_031811279.1|179815_179944_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000429653.1|179910_180489_+	DUF4355 domain-containing protein	NA	Q4ZE34	Staphylococcus_virus	50.8	1.9e-09
WP_000104116.1|181495_181969_+	hypothetical protein	NA	A0A2H4J9T3	uncultured_Caudovirales_phage	31.6	9.7e-12
WP_001010139.1|181984_182311_+|head,tail	phage head-tail connector protein	head,tail	Q4ZE31	Staphylococcus_virus	56.4	2.1e-26
WP_001198140.1|182616_182967_+	hypothetical protein	NA	H9A0N6	Staphylococcus_phage	60.0	9.3e-36
WP_000680037.1|182976_183372_+	hypothetical protein	NA	H9A0N7	Staphylococcus_phage	42.3	1.9e-21
WP_000276225.1|183383_183983_+|tail	phage major tail protein, TP901-1 family	tail	H9A0N8	Staphylococcus_phage	47.5	7.4e-17
WP_101766548.1|184044_184389_+|tail	phage tail protein	tail	A0A1J0MFH0	Staphylococcus_phage	58.9	2.9e-34
WP_001808026.1|184439_184793_+	hypothetical protein	NA	Q4ZE25	Staphylococcus_virus	72.3	1.7e-37
>prophage 2
NZ_CP020714	Staphylococcus aureus strain K18 chromosome, complete genome	2731897	188932	199370	2731897	holin,head	Staphylococcus_phage(75.0%)	8	NA	NA
WP_101766547.1|188932_190618_+	hypothetical protein	NA	Q4ZE19	Staphylococcus_virus	46.5	1.4e-108
WP_000700623.1|190635_191649_+	SGNH/GDSL hydrolase family protein	NA	A0A1J0MFI8	Staphylococcus_phage	52.6	6.5e-98
WP_101766546.1|193076_193466_+|holin	phage holin family protein	holin	A0A1S6L1J2	Staphylococcus_phage	38.2	6.9e-16
WP_101766545.1|193530_194436_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A1W6JQL2	Staphylococcus_phage	50.4	1.0e-65
WP_001808024.1|194905_195103_+	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	48.4	3.7e-10
WP_001808025.1|195323_196259_+	Abi family protein	NA	A0A059NT88	Lactococcus_phage	44.0	5.3e-70
WP_076692498.1|197550_197775_+	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	75.4	1.6e-20
WP_101766544.1|198029_199370_+|head	phage head morphogenesis protein	head	A0A1J0MF61	Staphylococcus_phage	58.7	5.3e-140
>prophage 3
NZ_CP020714	Staphylococcus aureus strain K18 chromosome, complete genome	2731897	471476	479806	2731897	tRNA	Staphylococcus_phage(16.67%)	7	NA	NA
WP_031775221.1|471476_472262_-	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	1.0e-18
WP_000924220.1|472387_473278_-	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	36.0	3.4e-26
WP_001062177.1|473287_474634_-	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	34.0	2.4e-55
WP_000683936.1|474747_475848_-	Nif3-like dinuclear metal center hexameric protein	NA	A0A1S5V250	Saudi_moumouvirus	29.6	5.2e-08
WP_023914705.1|475850_476528_-|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_001283055.1|476658_477765_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_001217244.1|477988_479806_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	3.6e-54
>prophage 4
NZ_CP020714	Staphylococcus aureus strain K18 chromosome, complete genome	2731897	751085	759558	2731897		Synechococcus_phage(33.33%)	9	NA	NA
WP_000238669.1|751085_751652_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	6.1e-29
WP_000030811.1|751654_752683_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.7	3.4e-62
WP_000483713.1|752675_754160_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	3.2e-45
WP_101766637.1|754138_756328_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.7	1.3e-140
WP_000666806.1|756320_756992_-	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000848350.1|756993_757257_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000174053.1|757256_757961_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
WP_001010413.1|757964_759089_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000861572.1|759075_759558_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
>prophage 5
NZ_CP020714	Staphylococcus aureus strain K18 chromosome, complete genome	2731897	1575094	1584137	2731897	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
WP_001005767.1|1575094_1576099_+	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
WP_001019174.1|1576100_1577126_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001112045.1|1577148_1578288_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_001160682.1|1578306_1578567_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_101766578.1|1578841_1581121_+	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	36.6	1.4e-31
WP_000594985.1|1581323_1583597_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.1	1.1e-63
WP_000364542.1|1583618_1584137_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
>prophage 6
NZ_CP020714	Staphylococcus aureus strain K18 chromosome, complete genome	2731897	1656488	1690991	2731897	protease	Staphylococcus_phage(90.62%)	39	NA	NA
WP_000764922.1|1656488_1657241_-	hypothetical protein	NA	A0A097PAT7	Streptococcus_pyogenes_phage	47.2	4.4e-51
WP_158294611.1|1657267_1657951_-	exotoxin	NA	A0EX09	Staphylococcus_phage	33.5	3.8e-25
WP_000669028.1|1658037_1658664_-	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	93.8	3.9e-93
WP_000070649.1|1658737_1659733_-	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	97.2	4.2e-73
WP_001793444.1|1659813_1660464_-	calcium-binding protein	NA	A0A2H4PQM8	Staphylococcus_phage	99.1	3.0e-56
WP_076692541.1|1660766_1661222_+	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	98.6	1.2e-78
WP_000348379.1|1661380_1662859_+	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	100.0	1.5e-289
WP_000778516.1|1662863_1663865_+	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	98.2	9.7e-187
WP_000718110.1|1663861_1664119_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	98.8	3.6e-45
WP_000672014.1|1664184_1664658_+	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.1	4.7e-83
WP_016169057.1|1664662_1665409_+	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	99.2	2.2e-143
WP_000109906.1|1665786_1667379_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
WP_000933822.1|1667750_1668944_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.7	1.9e-218
WP_000366163.1|1669068_1669977_+	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	100.0	3.4e-138
WP_000453298.1|1670188_1671022_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	99.3	7.8e-158
WP_000623478.1|1671404_1671758_-	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	100.0	2.6e-22
WP_001200542.1|1671754_1672120_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
WP_000091445.1|1672375_1672678_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001096494.1|1672937_1673651_+	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_101766565.1|1674090_1674726_-|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_001030469.1|1675021_1675465_+	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	98.6	2.4e-57
WP_001153742.1|1675451_1675895_-	competence protein ComK	NA	NA	NA	NA	NA
WP_000671052.1|1676007_1676478_-	RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	99.4	1.0e-82
WP_000384171.1|1676676_1676901_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001032833.1|1677176_1678031_+	autolysin	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_000163235.1|1678325_1678721_-	arsenate reductase (thioredoxin)	NA	A0A2H4PQT9	Staphylococcus_phage	100.0	6.3e-73
WP_000989121.1|1678738_1680031_-	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	99.5	5.0e-228
WP_000221177.1|1680030_1680345_-	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	98.1	9.8e-53
WP_001261669.1|1680867_1682370_+	FAD-dependent oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	100.0	2.3e-30
WP_025174259.1|1682862_1683894_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.8	2.0e-195
WP_000493888.1|1683900_1684533_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	100.0	3.4e-113
WP_001159035.1|1684543_1685725_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	100.0	1.7e-227
WP_001008549.1|1685737_1686202_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	100.0	4.5e-70
WP_001196345.1|1686323_1687325_-	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	100.0	3.1e-185
WP_001790712.1|1687436_1687556_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000266096.1|1687558_1688386_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_000757543.1|1688956_1689358_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000764419.1|1689477_1690041_-	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
WP_000526539.1|1690037_1690991_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
>prophage 7
NZ_CP020714	Staphylococcus aureus strain K18 chromosome, complete genome	2731897	1993785	2050223	2731897	capsid,head,plate,integrase,portal,holin,terminase,tail	Staphylococcus_phage(84.42%)	83	2043060:2043076	2055366:2055382
WP_001121760.1|1993785_1995090_+	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	80.7	6.7e-196
WP_000785252.1|1995428_1995887_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000556760.1|1995953_1996187_+	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_001165964.1|1996302_1997043_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_101766653.1|1997076_1999449_+	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	39.0	1.3e-93
WP_001085185.1|1999470_1999935_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	100.0	1.5e-81
WP_101766654.1|2000446_2001496_-|integrase	site-specific integrase	integrase	W5R968	Staphylococcus_phage	99.1	7.0e-196
WP_101766655.1|2001557_2002061_-	hypothetical protein	NA	A0A059T7N4	Staphylococcus_phage	98.8	1.5e-47
WP_101766656.1|2002064_2002556_-	hypothetical protein	NA	M9NSS1	Staphylococcus_phage	98.2	3.7e-83
WP_064138661.1|2002576_2003038_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4IYT4	uncultured_Caudovirales_phage	58.9	4.9e-45
WP_064138660.1|2003053_2003368_-	helix-turn-helix transcriptional regulator	NA	A0A1W6JP51	Staphylococcus_phage	72.1	6.4e-36
WP_064138659.1|2003534_2003780_+	helix-turn-helix transcriptional regulator	NA	I6T7P7	Staphylococcus_virus	77.8	1.3e-28
WP_021285963.1|2003949_2004186_-	hypothetical protein	NA	Q4ZBN3	Staphylococcus_phage	97.4	8.7e-38
WP_072496014.1|2004250_2004952_+	phage repressor protein	NA	W5R8M8	Staphylococcus_phage	98.7	5.1e-126
WP_000455728.1|2004976_2005186_+	hypothetical protein	NA	A0A2H4PQR1	Staphylococcus_phage	100.0	9.7e-33
WP_000048124.1|2005199_2005361_+	DUF1270 family protein	NA	C7F7L3	Staphylococcus_phage	100.0	1.9e-20
WP_101766657.1|2005453_2005756_+	DUF2482 family protein	NA	A0A0F6N3N3	Staphylococcus_phage	99.0	1.2e-47
WP_000291066.1|2005760_2006021_+	DUF1108 family protein	NA	A0A068A219	Staphylococcus_phage	100.0	8.9e-44
WP_000815402.1|2006030_2006252_+	DUF2483 family protein	NA	B2ZYV2	Staphylococcus_phage	100.0	3.2e-34
WP_000134097.1|2006244_2007033_+	ATP-binding protein	NA	Q4ZBM5	Staphylococcus_phage	100.0	2.6e-142
WP_000704705.1|2007061_2007613_+	single-stranded DNA-binding protein	NA	Q4ZBM4	Staphylococcus_phage	100.0	3.4e-101
WP_101766658.1|2007625_2008318_+	hypothetical protein	NA	Q4ZAZ0	Staphylococcus_virus	98.3	2.0e-130
WP_000504988.1|2008289_2009093_+	replication protein	NA	A0A2H4JCF5	uncultured_Caudovirales_phage	100.0	1.1e-121
WP_031790239.1|2009102_2009876_+	ATP-binding protein	NA	A0A2I6PDA0	Staphylococcus_phage	99.6	2.7e-144
WP_000256596.1|2009869_2010028_+	hypothetical protein	NA	A0A2I6PDX0	Staphylococcus_phage	96.2	5.8e-22
WP_001123695.1|2010040_2010262_+	DUF3269 family protein	NA	A0A0H3U2V4	Staphylococcus_phage	100.0	2.2e-35
WP_000049784.1|2010272_2010677_+	DUF1064 domain-containing protein	NA	A7TWN5	Staphylococcus_phage	100.0	7.1e-72
WP_001187266.1|2010681_2010867_+	DUF3113 family protein	NA	A0A1X9H0T9	Staphylococcus_phage	95.1	6.0e-26
WP_101766659.1|2010867_2011485_+	hypothetical protein	NA	A0A0H3U4U9	Staphylococcus_phage	99.5	1.2e-83
WP_000022722.1|2011484_2011739_+	DUF3310 domain-containing protein	NA	A0A2K9VBW1	Staphylococcus_phage	100.0	1.6e-42
WP_078152178.1|2011738_2011987_+	hypothetical protein	NA	A0A2I6PDB4	Staphylococcus_phage	100.0	2.1e-42
WP_000676977.1|2012001_2012208_+	hypothetical protein	NA	A0A2I6PDB7	Staphylococcus_phage	100.0	1.3e-34
WP_101766660.1|2012210_2012615_+	hypothetical protein	NA	A0A0E3T8H9	Staphylococcus_phage	98.5	6.0e-71
WP_000983953.1|2012611_2012806_+	hypothetical protein	NA	A0A0E3XCV8	Staphylococcus_phage	100.0	2.5e-27
WP_016060010.1|2012802_2013174_+	hypothetical protein	NA	I1W606	Staphylococcus_phage	100.0	1.6e-65
WP_016060009.1|2013170_2013560_+	hypothetical protein	NA	I1W604	Staphylococcus_phage	100.0	1.4e-69
WP_001065104.1|2013552_2013807_+	DUF1024 family protein	NA	A7TWH5	Staphylococcus_phage	92.9	6.1e-37
WP_072433467.1|2013769_2013964_+	hypothetical protein	NA	M1SVE4	Staphylococcus_phage	93.4	1.3e-23
WP_101766661.1|2013956_2014469_+	dUTP pyrophosphatase	NA	Q4ZDG4	Staphylococcus_virus	98.8	2.8e-89
WP_001613442.1|2014505_2014793_+	DUF1381 domain-containing protein	NA	Q4ZAB6	Staphylococcus_virus	96.8	4.4e-44
WP_000608276.1|2014785_2015022_+	hypothetical protein	NA	A0A2I6PEM4	Staphylococcus_phage	94.9	2.0e-34
WP_032099404.1|2015005_2015401_+	phage protein	NA	M9QX07	Staphylococcus_phage	94.7	1.3e-62
WP_070023635.1|2015397_2015571_+	transcriptional regulator	NA	A0A0H3U4U1	Staphylococcus_phage	96.5	1.9e-21
WP_009560343.1|2015571_2015718_+	hypothetical protein	NA	B2ZYX7	Staphylococcus_phage	97.9	3.7e-15
WP_101766662.1|2015741_2016164_+	RinA family phage transcriptional activator	NA	A0A0F6N3E5	Staphylococcus_phage	99.3	2.7e-74
WP_158216484.1|2016671_2016989_+	hypothetical protein	NA	M9NRI9	Staphylococcus_phage	98.1	3.9e-49
WP_001037578.1|2016981_2018205_+|terminase	PBSX family phage terminase large subunit	terminase	A0A0N9BAX9	Staphylococcus_phage	100.0	7.5e-242
WP_000177426.1|2018201_2019626_+|portal	phage portal protein	portal	A0A0E3T9I6	Staphylococcus_phage	100.0	4.8e-272
WP_000184140.1|2019594_2020545_+	hypothetical protein	NA	M9NST7	Staphylococcus_phage	100.0	2.3e-177
WP_000440857.1|2020548_2020782_+	hypothetical protein	NA	M9NUJ2	Staphylococcus_phage	100.0	2.5e-37
WP_001019222.1|2020885_2021470_+	DUF4355 domain-containing protein	NA	M9NRJ1	Staphylococcus_phage	99.5	9.9e-75
WP_000235170.1|2021486_2022401_+|capsid	phage major capsid protein	capsid	A0A059T7K3	Staphylococcus_phage	99.3	1.3e-169
WP_000177353.1|2022561_2022912_+|head,tail	phage head-tail adapter protein	head,tail	A0A0H3U2R5	Staphylococcus_phage	99.1	3.2e-60
WP_000483043.1|2022923_2023259_+|head	phage head closure protein	head	M9NUJ3	Staphylococcus_phage	98.2	1.3e-58
WP_001151327.1|2023245_2023659_+	HK97 gp10 family phage protein	NA	A0A0N9BAY5	Staphylococcus_phage	98.5	2.0e-74
WP_000270186.1|2023671_2024097_+	DUF3168 domain-containing protein	NA	Q4ZBQ9	Staphylococcus_phage	98.6	2.3e-73
WP_000057585.1|2024097_2024655_+	hypothetical protein	NA	A0A059T675	Staphylococcus_phage	100.0	4.1e-102
WP_000134335.1|2024721_2025234_+	hypothetical protein	NA	A0A059T5B1	Staphylococcus_phage	99.4	1.2e-92
WP_101766663.1|2025278_2025563_+	hypothetical protein	NA	A0A059T626	Staphylococcus_phage	96.8	9.8e-44
WP_101766664.1|2025566_2028452_+|terminase	terminase	terminase	M9NRJ5	Staphylococcus_phage	92.2	2.3e-310
WP_000560186.1|2028466_2029408_+	hypothetical protein	NA	A0A059T7K5	Staphylococcus_phage	98.1	4.5e-178
WP_001122007.1|2029418_2031305_+	hypothetical protein	NA	A0A059T677	Staphylococcus_phage	97.8	0.0e+00
WP_101766665.1|2031317_2033216_+	hypothetical protein	NA	A0A0H3U448	Staphylococcus_phage	95.1	0.0e+00
WP_101766666.1|2033215_2035039_+|plate	phage baseplate upper protein	plate	B1H3M3	Staphylococcus_phage	99.8	0.0e+00
WP_000705893.1|2035038_2035416_+	DUF2977 domain-containing protein	NA	Q8LTH7	Staphylococcus_phage	100.0	7.3e-55
WP_001800921.1|2035419_2035593_+	XkdX family protein	NA	A0A059T7K6	Staphylococcus_phage	100.0	1.3e-27
WP_000466784.1|2035633_2035933_+	DUF2951 domain-containing protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
WP_101766667.1|2036069_2037944_+	CHAP domain-containing protein	NA	Q4ZBP7	Staphylococcus_phage	97.8	0.0e+00
WP_101766668.1|2037956_2040551_+|plate	BppU family phage baseplate upper protein	plate	Q4ZC48	Staphylococcus_virus	57.0	1.1e-271
WP_101766669.1|2040606_2041044_+|holin	phage holin	holin	A7YGY0	Staphylococcus_virus	97.2	2.2e-71
WP_101766670.1|2041024_2042470_+	CHAP domain-containing protein	NA	Q08JW9	Staphylococcus_phage	97.7	5.7e-289
WP_101766671.1|2042998_2043205_+	hypothetical protein	NA	A0A2H4PQT0	Staphylococcus_phage	98.5	9.9e-30
2043060:2043076	attL	ATAAAATTGCTAAAAAT	NA	NA	NA	NA
WP_000498229.1|2043218_2043419_+	hypothetical protein	NA	A0A2H4PQS9	Staphylococcus_phage	100.0	3.5e-32
WP_101766672.1|2043708_2044815_-|integrase	site-specific integrase	integrase	A0A1B2AQ00	Phage_Wrath	43.0	1.2e-76
WP_101766673.1|2044804_2045608_-	helix-turn-helix transcriptional regulator	NA	A0A2H4JC02	uncultured_Caudovirales_phage	55.9	5.3e-10
WP_001045296.1|2045743_2045947_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_064136869.1|2045982_2046201_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_101766674.1|2046212_2046368_+	pathogenicity island protein	NA	NA	NA	NA	NA
WP_101766675.1|2046351_2046657_+	DUF1474 family protein	NA	Q4ZE75	Staphylococcus_phage	88.1	3.1e-43
WP_101766676.1|2046731_2048342_+	phage resistance protein	NA	A0A1W6JPF4	Staphylococcus_phage	77.6	4.0e-243
WP_101766677.1|2048517_2049321_+	DNA primase	NA	Q4ZE69	Staphylococcus_phage	96.3	1.3e-149
WP_101766678.1|2049307_2049580_+	pathogenicity island protein	NA	Q4ZE68	Staphylococcus_phage	92.2	2.0e-41
WP_101766679.1|2049581_2050223_+	pathogenicity island protein	NA	Q4ZE67	Staphylococcus_phage	93.0	4.2e-111
2055366:2055382	attR	ATAAAATTGCTAAAAAT	NA	NA	NA	NA
>prophage 8
NZ_CP020714	Staphylococcus aureus strain K18 chromosome, complete genome	2731897	2355625	2367934	2731897		uncultured_Caudovirales_phage(37.5%)	11	NA	NA
WP_001670387.1|2355625_2356039_+	hypothetical protein	NA	A0A1Q1PVU5	Staphylococcus_phage	39.1	5.1e-17
WP_000562498.1|2356639_2357611_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000855505.1|2357728_2359834_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000692521.1|2359796_2360195_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_101766697.1|2360995_2361862_+	DMT family transporter	NA	NA	NA	NA	NA
WP_000930014.1|2361881_2362382_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_000193751.1|2362722_2364228_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_001790641.1|2364305_2364407_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000429014.1|2364497_2365415_+	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	3.7e-07
WP_000197271.1|2366038_2366581_-	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_101766698.1|2366875_2367934_-	histidinol-phosphate transaminase	NA	A0A0H3TLT9	Faustovirus	27.3	1.1e-20
>prophage 9
NZ_CP020714	Staphylococcus aureus strain K18 chromosome, complete genome	2731897	2379906	2387725	2731897		Pandoravirus(16.67%)	10	NA	NA
WP_001217802.1|2379906_2381058_-	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	36.1	1.2e-23
WP_000604514.1|2381041_2381635_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
WP_000446724.1|2381985_2382654_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000941336.1|2382655_2383075_+	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_001062972.1|2383078_2383792_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000604990.1|2383890_2384475_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001093562.1|2384754_2385195_+	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_001037807.1|2385535_2386009_+	DoxX family protein	NA	NA	NA	NA	NA
WP_000149344.1|2385983_2386670_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000244417.1|2386669_2387725_+	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	29.5	1.6e-14
>prophage 10
NZ_CP020714	Staphylococcus aureus strain K18 chromosome, complete genome	2731897	2514429	2525788	2731897	integrase	Staphylococcus_phage(61.54%)	14	2516160:2516185	2528911:2528936
WP_000700923.1|2514429_2515782_-	carboxylesterase/lipase family protein	NA	A0A0B5J865	Pandoravirus	34.2	2.5e-12
2516160:2516185	attL	CACCCCAACTTGCATTGTCTGTAGAA	NA	NA	NA	NA
WP_101766726.1|2516503_2517145_-	pathogenicity island protein	NA	Q4ZE67	Staphylococcus_phage	92.0	1.4e-109
WP_020977426.1|2517141_2517522_-	hypothetical protein	NA	Q4ZE71	Staphylococcus_phage	96.0	3.2e-66
WP_000447470.1|2517851_2519552_-	DUF927 domain-containing protein	NA	Q4ZE73	Staphylococcus_phage	95.2	1.3e-308
WP_001002689.1|2519565_2520435_-	hypothetical protein	NA	Q4ZE74	Staphylococcus_phage	96.2	1.5e-164
WP_001103944.1|2520501_2520822_-	DUF1474 family protein	NA	A0A1W6JQH0	Staphylococcus_phage	58.2	6.5e-20
WP_001058486.1|2520824_2521034_-	hypothetical protein	NA	Q4ZE76	Staphylococcus_phage	94.2	1.7e-29
WP_000708434.1|2521026_2521173_-	hypothetical protein	NA	NA	NA	NA	NA
WP_069724350.1|2521169_2521487_-	helix-turn-helix domain-containing protein	NA	A0A1W6JQE0	Staphylococcus_phage	97.1	1.6e-50
WP_000153640.1|2521491_2521710_-	helix-turn-helix transcriptional regulator	NA	A0A2H4JB11	uncultured_Caudovirales_phage	66.7	1.3e-19
WP_000620857.1|2521882_2522557_+	helix-turn-helix transcriptional regulator	NA	A0A2H4JGT9	uncultured_Caudovirales_phage	45.8	1.6e-39
WP_000179346.1|2522570_2523743_+|integrase	site-specific integrase	integrase	A0A1W6JQD3	Staphylococcus_phage	97.9	1.3e-219
WP_000240642.1|2523811_2525428_-	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.7	3.4e-157
WP_000917289.1|2525503_2525788_-	co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
2528911:2528936	attR	CACCCCAACTTGCATTGTCTGTAGAA	NA	NA	NA	NA
