assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002855325.1_ASM285532v1	NZ_CP024127	Escherichia coli strain 14EC001 chromosome, complete genome	1	1005939-1006577	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no		cas3,csa3,PD-DExK,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,PrimPol,RT	Orphan	GTGTTCCCCGCGCCAGCGGGGATAAACC,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	28,29,29	0	0	NA	NA	I-E:I-E:I-E	10,10,10	10	Orphan	cas3,csa3,PD-DExK,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,PrimPol,RT	NA,NA	NA|447aa|up_9|NZ_CP024127.1_990183_991524_+	TIGR03247, glucar-dehydr, glucarate dehydratase	NA|919aa|up_8|NZ_CP024127.1_991756_994513_-	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional	NA|434aa|up_7|NZ_CP024127.1_994569_995871_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_6|NZ_CP024127.1_995918_998153_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_5|NZ_CP024127.1_998230_998479_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_4|NZ_CP024127.1_998478_998814_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_3|NZ_CP024127.1_998884_999676_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_2|NZ_CP024127.1_999903_1001541_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_1|NZ_CP024127.1_1001628_1002927_+	PRK00077, eno, enolase; Provisional	NA|224aa|up_0|NZ_CP024127.1_1004927_1005599_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP024127.1_1007215_1008694_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NZ_CP024127.1_1008720_1009998_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|NZ_CP024127.1_1010316_1011102_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|NZ_CP024127.1_1011171_1012626_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|446aa|down_4|NZ_CP024127.1_1012719_1014057_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_5|NZ_CP024127.1_1014034_1014814_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|287aa|down_6|NZ_CP024127.1_1014810_1015671_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_7|NZ_CP024127.1_1015818_1016394_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|NZ_CP024127.1_1016410_1016671_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_9|NZ_CP024127.1_1016661_1017933_-	PRK10015, PRK10015, oxidoreductase; Provisional
GCF_002855325.1_ASM285532v1	NZ_CP024127	Escherichia coli strain 14EC001 chromosome, complete genome	2	1033628-1033961	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,csa3,PD-DExK,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,PrimPol,RT	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	5,5,5	5	TypeI-E	cas3,csa3,PD-DExK,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,PrimPol,RT	NA,NA	NA|245aa|up_9|NZ_CP024127.1_1022277_1023012_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|51aa|up_8|NZ_CP024127.1_1023276_1023429_+	pfam01848, HOK_GEF, Hok/gef family	NA|377aa|up_7|NZ_CP024127.1_1023604_1024735_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	cas3|900aa|up_6|NZ_CP024127.1_1024973_1027673_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cse2gr11|179aa|up_5|NZ_CP024127.1_1029328_1029865_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|352aa|up_4|NZ_CP024127.1_1029876_1030932_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|NZ_CP024127.1_1030942_1031689_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|NZ_CP024127.1_1031670_1032321_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|308aa|up_1|NZ_CP024127.1_1032317_1033241_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_CP024127.1_1033237_1033531_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP024127.1_1034042_1035080_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP024127.1_1035331_1036240_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP024127.1_1036241_1037669_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP024127.1_1037668_1038274_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP024127.1_1038323_1038647_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP024127.1_1038840_1039152_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP024127.1_1039170_1039881_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP024127.1_1039880_1040360_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP024127.1_1040356_1041406_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP024127.1_1041386_1042148_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_002855325.1_ASM285532v1	NZ_CP024127	Escherichia coli strain 14EC001 chromosome, complete genome	3	1537695-1537812	3	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,PrimPol,RT	Orphan	CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	31	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,PrimPol,RT	NA,NA	NA|62aa|up_9|NZ_CP024127.1_1526203_1526389_-	PRK09956, PRK09956, ISNCY family transposase	NA|300aa|up_8|NZ_CP024127.1_1526401_1527301_-	PRK09956, PRK09956, ISNCY family transposase	NA|397aa|up_7|NZ_CP024127.1_1527493_1528684_-	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit	NA|420aa|up_6|NZ_CP024127.1_1528680_1529940_-	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|543aa|up_5|NZ_CP024127.1_1529929_1531558_-	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|82aa|up_4|NZ_CP024127.1_1531830_1532076_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|359aa|up_3|NZ_CP024127.1_1533970_1535047_+	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|217aa|up_2|NZ_CP024127.1_1535509_1536160_+	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|85aa|up_1|NZ_CP024127.1_1536213_1536468_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|377aa|up_0|NZ_CP024127.1_1536467_1537598_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|762aa|down_0|NZ_CP024127.1_1537831_1540117_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|1251aa|down_1|NZ_CP024127.1_1540812_1544565_+	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|241aa|down_2|NZ_CP024127.1_1544692_1545415_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|876aa|down_3|NZ_CP024127.1_1545561_1548189_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|563aa|down_4|NZ_CP024127.1_1548337_1550026_+	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|208aa|down_5|NZ_CP024127.1_1550022_1550646_+	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1465aa|down_6|NZ_CP024127.1_1550789_1555184_+	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|550aa|down_7|NZ_CP024127.1_1555184_1556834_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|252aa|down_8|NZ_CP024127.1_1556858_1557614_+	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]	NA|395aa|down_9|NZ_CP024127.1_1557687_1558872_-	PRK05790, PRK05790, putative acyltransferase; Provisional
GCF_002855325.1_ASM285532v1	NZ_CP024127	Escherichia coli strain 14EC001 chromosome, complete genome	4	2310133-2310256	4	CRISPRCasFinder	no	DEDDh	cas3,csa3,PD-DExK,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,PrimPol,RT	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,PrimPol,RT	NA,NA|30aa|down_8|NZ_CP024127.1_2320465_2320555_+	NA|471aa|up_9|NZ_CP024127.1_2299587_2301000_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP024127.1_2301556_2301766_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP024127.1_2302220_2302847_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP024127.1_2302867_2304970_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|216aa|up_5|NZ_CP024127.1_2304973_2305621_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP024127.1_2305684_2306353_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP024127.1_2306349_2307135_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP024127.1_2307138_2307951_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP024127.1_2307962_2309567_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP024127.1_2309692_2309998_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|405aa|down_0|NZ_CP024127.1_2310533_2311747_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|419aa|down_1|NZ_CP024127.1_2311883_2313140_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_2|NZ_CP024127.1_2313180_2314554_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_3|NZ_CP024127.1_2314768_2315410_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_4|NZ_CP024127.1_2315449_2316598_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_5|NZ_CP024127.1_2316888_2318100_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_6|NZ_CP024127.1_2318212_2319145_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_7|NZ_CP024127.1_2319141_2320167_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_8|NZ_CP024127.1_2320465_2320555_+	NA	NA|390aa|down_9|NZ_CP024127.1_2320720_2321890_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]
GCF_002855325.1_ASM285532v1	NZ_CP024127	Escherichia coli strain 14EC001 chromosome, complete genome	5	3113253-3113344	5	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,PrimPol,RT	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,PrimPol,RT	NA|62aa|up_8|NZ_CP024127.1_3102330_3102516_-,NA	NA|503aa|up_9|NZ_CP024127.1_3100663_3102172_-	PRK15419, PRK15419, sodium/proline symporter PutP	NA|62aa|up_8|NZ_CP024127.1_3102330_3102516_-	NA	NA|1321aa|up_7|NZ_CP024127.1_3102594_3106557_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_6|NZ_CP024127.1_3106596_3107235_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_5|NZ_CP024127.1_3107522_3108614_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_4|NZ_CP024127.1_3108613_3109306_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_3|NZ_CP024127.1_3109317_3109704_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|197aa|up_2|NZ_CP024127.1_3110519_3111110_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP024127.1_3111120_3111615_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP024127.1_3111635_3112964_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP024127.1_3113767_3114364_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP024127.1_3114384_3114612_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP024127.1_3114649_3115891_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|307aa|down_3|NZ_CP024127.1_3117699_3118620_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_4|NZ_CP024127.1_3118619_3118925_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_5|NZ_CP024127.1_3119076_3119676_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_6|NZ_CP024127.1_3119672_3122219_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_7|NZ_CP024127.1_3122218_3123391_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|231aa|down_8|NZ_CP024127.1_3123520_3124213_+	PRK10766, PRK10766, two-component system response regulator TorR	NA|343aa|down_9|NZ_CP024127.1_3124185_3125214_-	PRK10936, PRK10936, TMAO reductase system periplasmic protein TorT; Provisional
GCF_002855325.1_ASM285532v1	NZ_CP024127	Escherichia coli strain 14EC001 chromosome, complete genome	6	3284992-3285136	6,3	CRISPRCasFinder,PILER-CR	no		cas3,csa3,PD-DExK,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,PrimPol,RT	Orphan	TTTCTAAGCTGCCTGTACGGCAGTGAAC,TTTCTAAGCTGCCTGTACGGCAGTGAAC	28,28	0	0	NA	NA	I-F:I-F	2,2	2	Orphan	cas3,csa3,PD-DExK,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,PrimPol,RT	NA,NA	NA|431aa|up_9|NZ_CP024127.1_3270115_3271408_-	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	NA|448aa|up_8|NZ_CP024127.1_3271498_3272842_-	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|204aa|up_7|NZ_CP024127.1_3272852_3273464_-	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA	NA|1330aa|up_6|NZ_CP024127.1_3273618_3277608_-	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|165aa|up_5|NZ_CP024127.1_3277742_3278237_-	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|322aa|up_4|NZ_CP024127.1_3278781_3279747_+	PRK10262, PRK10262, thioredoxin reductase; Provisional	NA|589aa|up_3|NZ_CP024127.1_3279869_3281636_+	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|574aa|up_2|NZ_CP024127.1_3281636_3283358_+	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|235aa|up_1|NZ_CP024127.1_3283399_3284104_+	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|73aa|up_0|NZ_CP024127.1_3284388_3284607_+	PRK00276, infA, translation initiation factor IF-1; Validated	NA|759aa|down_0|NZ_CP024127.1_3285347_3287624_-	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional	NA|107aa|down_1|NZ_CP024127.1_3287654_3287975_-	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|75aa|down_2|NZ_CP024127.1_3288297_3288522_+	PRK09937, PRK09937, cold shock-like protein CspD	NA|649aa|down_3|NZ_CP024127.1_3288594_3290541_-	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|372aa|down_4|NZ_CP024127.1_3290537_3291653_-	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|319aa|down_5|NZ_CP024127.1_3291803_3292760_+	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown]	NA|553aa|down_6|NZ_CP024127.1_3292756_3294415_-	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|232aa|down_7|NZ_CP024127.1_3294839_3295535_+	PRK05420, PRK05420, aquaporin Z; Provisional	NA|300aa|down_8|NZ_CP024127.1_3296029_3296929_+	COG2431, COG2431, Predicted membrane protein [Function unknown]	NA|551aa|down_9|NZ_CP024127.1_3297072_3298725_+	PRK05290, PRK05290, hybrid cluster protein; Provisional
GCF_002855325.1_ASM285532v1	NZ_CP024127	Escherichia coli strain 14EC001 chromosome, complete genome	7	3451645-3451789	7	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,PrimPol,RT	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	52	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,PrimPol,RT	NA|94aa|up_7|NZ_CP024127.1_3447289_3447571_+,NA|56aa|up_4|NZ_CP024127.1_3448247_3448415_+,NA|115aa|up_3|NZ_CP024127.1_3448443_3448788_+,NA	NA|61aa|up_9|NZ_CP024127.1_3446932_3447115_+	pfam07026, DUF1317, Protein of unknown function (DUF1317)	NA|64aa|up_8|NZ_CP024127.1_3447087_3447279_+	pfam07131, DUF1382, Protein of unknown function (DUF1382)	NA|94aa|up_7|NZ_CP024127.1_3447289_3447571_+	NA	NA|74aa|up_6|NZ_CP024127.1_3447669_3447891_+	PHA00080, PHA00080, DksA-like zinc finger domain containing protein	NA|95aa|up_5|NZ_CP024127.1_3447890_3448175_+	smart01022, ASCH, The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain	NA|56aa|up_4|NZ_CP024127.1_3448247_3448415_+	NA	NA|115aa|up_3|NZ_CP024127.1_3448443_3448788_+	NA	NA|73aa|up_2|NZ_CP024127.1_3448894_3449113_+	pfam07825, Exc, Excisionase-like protein	NA|357aa|up_1|NZ_CP024127.1_3449090_3450161_+	cd00800, INT_Lambda_C, C-terminal catalytic domain of Lambda integrase, a tyrosine-based site-specific recombinase	NA|428aa|up_0|NZ_CP024127.1_3450295_3451579_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|754aa|down_0|NZ_CP024127.1_3451812_3454074_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|332aa|down_1|NZ_CP024127.1_3455840_3456836_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_2|NZ_CP024127.1_3456990_3457809_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_3|NZ_CP024127.1_3457809_3458868_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_4|NZ_CP024127.1_3458870_3459560_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_5|NZ_CP024127.1_3459559_3460333_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|50aa|down_6|NZ_CP024127.1_3460499_3460649_-	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ	NA|263aa|down_7|NZ_CP024127.1_3460777_3461566_+	PRK10676, PRK10676, DNA-binding transcriptional regulator ModE; Provisional	NA|491aa|down_8|NZ_CP024127.1_3461633_3463106_+	PRK10938, PRK10938, putative molybdenum transport ATP-binding protein ModF; Provisional	NA|339aa|down_9|NZ_CP024127.1_3463366_3464383_+	PRK10675, PRK10675, UDP-galactose-4-epimerase; Provisional
GCF_002855325.1_ASM285532v1	NZ_CP024127	Escherichia coli strain 14EC001 chromosome, complete genome	8	3727112-3727208	8	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,PrimPol,RT	Orphan	TTGTAGGCCTGATAAGATGCGTCAAGC	27	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,PrimPol,RT	NA,NA	NA|231aa|up_9|NZ_CP024127.1_3718907_3719600_-	PRK15195, PRK15195, molecular chaperone FimC	NA|181aa|up_8|NZ_CP024127.1_3719819_3720362_-	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA	NA|289aa|up_7|NZ_CP024127.1_3720832_3721699_+	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|71aa|up_6|NZ_CP024127.1_3721700_3721913_+	PRK11507, PRK11507, ribosome-associated protein YbcJ	NA|174aa|up_5|NZ_CP024127.1_3722020_3722542_+	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|462aa|up_4|NZ_CP024127.1_3722577_3723963_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|165aa|up_3|NZ_CP024127.1_3724136_3724631_+	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|241aa|up_2|NZ_CP024127.1_3724633_3725356_+	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|170aa|up_1|NZ_CP024127.1_3725473_3725983_+	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|356aa|up_0|NZ_CP024127.1_3725979_3727047_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|298aa|down_0|NZ_CP024127.1_3727241_3728135_-	PRK09411, PRK09411, carbamate kinase; Reviewed	NA|272aa|down_1|NZ_CP024127.1_3728131_3728947_-	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|420aa|down_2|NZ_CP024127.1_3728957_3730217_-	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|556aa|down_3|NZ_CP024127.1_3730226_3731894_-	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|350aa|down_4|NZ_CP024127.1_3732210_3733260_+	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional	NA|412aa|down_5|NZ_CP024127.1_3733281_3734517_+	TIGR03176, AllC, allantoate amidohydrolase	NA|382aa|down_6|NZ_CP024127.1_3736317_3737463_-	PRK09932, PRK09932, glycerate 3-kinase	NA|434aa|down_7|NZ_CP024127.1_3737484_3738786_-	PRK11412, PRK11412, uracil/xanthine transporter	NA|454aa|down_8|NZ_CP024127.1_3738842_3740204_-	PRK08044, PRK08044, allantoinase AllB	NA|485aa|down_9|NZ_CP024127.1_3740263_3741718_-	PRK11375, PRK11375, putative allantoin permease
GCF_002855325.1_ASM285532v1	NZ_CP024127	Escherichia coli strain 14EC001 chromosome, complete genome	9	4286037-4286178	9	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,PrimPol,RT	Orphan	GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA	52	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4,PrimPol,RT	NA,NA	NA|96aa|up_9|NZ_CP024127.1_4275027_4275315_-	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|429aa|up_8|NZ_CP024127.1_4275311_4276598_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_7|NZ_CP024127.1_4276648_4277590_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|257aa|up_6|NZ_CP024127.1_4277604_4278375_-	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|505aa|up_5|NZ_CP024127.1_4278848_4280363_+	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|381aa|up_4|NZ_CP024127.1_4280393_4281536_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|406aa|up_3|NZ_CP024127.1_4281664_4282882_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|518aa|up_2|NZ_CP024127.1_4282955_4284509_+	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|262aa|up_1|NZ_CP024127.1_4284617_4285403_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|197aa|up_0|NZ_CP024127.1_4285408_4285999_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_0|NZ_CP024127.1_4286207_4286603_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|1074aa|down_1|NZ_CP024127.1_4286864_4290086_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_2|NZ_CP024127.1_4290103_4291252_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|274aa|down_3|NZ_CP024127.1_4291707_4292529_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]	NA|305aa|down_4|NZ_CP024127.1_4292695_4293610_-	PRK10768, PRK10768, ribonucleoside hydrolase RihC; Provisional	NA|317aa|down_5|NZ_CP024127.1_4293675_4294626_-	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed	NA|150aa|down_6|NZ_CP024127.1_4294627_4295077_-	PRK15095, PRK15095, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional	NA|165aa|down_7|NZ_CP024127.1_4295201_4295696_-	PRK00376, lspA, lipoprotein signal peptidase	NA|939aa|down_8|NZ_CP024127.1_4295695_4298512_-	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed	NA|314aa|down_9|NZ_CP024127.1_4298554_4299496_-	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase
