The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP018041	Bordetella pertussis strain J306 chromosome, complete genome	4103205	27282	79602	4103205	transposase,tRNA	Synechococcus_phage(25.0%)	49	NA	NA
WP_010929577.1|27282_28233_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995007.1|28314_28650_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929578.1|28674_29109_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929579.1|29141_30368_-	thiolase family protein	NA	NA	NA	NA	NA
WP_010929580.1|30364_30862_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_010929581.1|31069_31978_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023995008.1|32163_33006_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929583.1|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003814398.1|35571_36762_-	MFS transporter	NA	NA	NA	NA	NA
WP_003814400.1|36948_37923_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_010929586.1|37924_40063_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003814404.1|40059_40599_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_003814405.1|40602_41331_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929587.1|41317_42211_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_019247766.1|42281_42677_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_003814412.1|42686_43217_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
WP_023852754.1|43345_43645_-	DUF1974 domain-containing protein	NA	NA	NA	NA	NA
WP_003815267.1|45111_45747_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815265.1|45718_45955_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815255.1|46082_46976_+	membrane protein	NA	NA	NA	NA	NA
WP_010929590.1|48145_49393_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_003817748.1|49389_50004_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
WP_010929591.1|50139_51090_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443813.1|51132_52389_+	muropeptide transporter	NA	NA	NA	NA	NA
WP_010929592.1|53620_54355_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_019247224.1|54360_54951_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
WP_003817737.1|54975_55665_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_023852650.1|55661_56423_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010929594.1|56502_57402_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_005012808.1|57495_58446_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929595.1|59246_60473_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_010929596.1|60472_60892_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929597.1|61075_62017_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929598.1|62440_63277_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929599.1|63471_64053_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_019248465.1|64065_64383_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_029443770.1|64486_65545_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_019247832.1|65579_66851_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010929603.1|67480_68662_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929584.1|69083_70034_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816713.1|70127_70442_+	DUF1153 domain-containing protein	NA	NA	NA	NA	NA
WP_010929604.1|71634_73542_+	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	37.2	1.1e-117
WP_010929605.1|73703_74324_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_003807804.1|74355_74937_-	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA	A0A1W6DX33	Sphingobium_phage	54.3	1.7e-05
WP_003807805.1|75025_75277_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929606.1|75278_76121_-	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA	NA
WP_010929607.1|76226_77636_+	signal recognition particle protein	NA	NA	NA	NA	NA
WP_005012067.1|77632_78583_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166334.1|78657_79602_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP018041	Bordetella pertussis strain J306 chromosome, complete genome	4103205	164889	301496	4103205	transposase,tRNA,protease	Klosneuvirus(10.53%)	117	NA	NA
WP_005015810.1|164889_165840_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929659.1|167283_168186_-	YgcG family protein	NA	NA	NA	NA	NA
WP_003815889.1|168163_168793_-	LemA family protein	NA	NA	NA	NA	NA
WP_029443820.1|169123_170506_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.5	5.3e-42
WP_010929661.1|170539_171169_+	LysE family transporter	NA	NA	NA	NA	NA
WP_003815895.1|171217_172825_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
WP_010929663.1|172849_173533_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815898.1|173614_174091_-	bacterioferritin	NA	NA	NA	NA	NA
WP_077068973.1|174131_174311_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929664.1|176362_176890_+	META domain-containing protein	NA	NA	NA	NA	NA
WP_010929665.1|176981_177797_+	META and DUF4377 domain-containing protein	NA	NA	NA	NA	NA
WP_003808370.1|177857_178592_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_010929666.1|178629_180708_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
WP_003808374.1|180957_181230_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014486043.1|181328_182417_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_010929668.1|182420_184325_+	BamA/TamA family outer membrane protein	NA	NA	NA	NA	NA
WP_014486044.1|184321_187996_+	DUF490 domain-containing protein	NA	NA	NA	NA	NA
WP_010929670.1|188056_188620_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
WP_003808385.1|188627_189050_-	glyoxalase	NA	NA	NA	NA	NA
WP_010929671.1|189077_189497_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
WP_077274090.1|189525_189972_-	GNAT family N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	29.4	1.2e-08
WP_003808391.1|190098_190596_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003808393.1|190750_193021_+	arginine/lysine/ornithine decarboxylase	NA	NA	NA	NA	NA
WP_010929672.1|193069_194302_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010929591.1|194400_195351_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879535.1|195396_196089_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.4e-83
WP_019248671.1|196085_196979_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_010929675.1|197373_198474_+	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_010929676.1|198555_198930_+	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_010929677.1|198989_201854_+	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
WP_010929678.1|201998_202739_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929679.1|202808_204020_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929680.1|204048_205017_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931070.1|205630_206581_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929699.1|206737_207061_+	phosphate starvation-inducible protein	NA	NA	NA	NA	NA
WP_010929698.1|207165_208215_-	cyclase	NA	NA	NA	NA	NA
WP_003819081.1|208211_209036_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
WP_003807672.1|209036_209333_-	YciI family protein	NA	NA	NA	NA	NA
WP_003807674.1|209358_209634_-	muconolactone Delta-isomerase	NA	NA	NA	NA	NA
WP_003819086.1|209690_210335_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_010929696.1|210334_211021_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010929695.1|211150_212002_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929694.1|212052_212778_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929693.1|212809_214159_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929692.1|214270_215203_-	3-hydroxyacyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_033455792.1|215660_218456_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
WP_010929690.1|219049_221992_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_010929689.1|222063_222783_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_010929688.1|222821_223370_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929687.1|223524_224424_+	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_005012808.1|224448_225399_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003818947.1|225616_226312_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247308.1|226328_227741_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_010929684.1|227853_229284_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929683.1|229325_231239_-	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA	NA
WP_010929682.1|231557_232124_+	preprotein translocase subunit SecD	NA	NA	NA	NA	NA
WP_010929681.1|232214_233216_+	HindIII family type II restriction endonuclease	NA	NA	NA	NA	NA
WP_005012067.1|233330_234281_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|234367_235318_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930742.1|235314_236265_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_153302767.1|236251_236425_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929700.1|236363_237161_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003814363.1|238110_238521_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA	NA
WP_003814358.1|239542_240286_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814356.1|240329_241373_-	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814355.1|241543_243646_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_003814351.1|245056_246013_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929701.1|246031_246523_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_010929702.1|246519_247875_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
WP_010929703.1|247875_248574_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_010929704.1|248570_249272_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
WP_003814339.1|249524_250574_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
WP_003814337.1|250679_251621_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_010929705.1|251617_253507_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
WP_003814332.1|253593_254232_+	membrane protein	NA	NA	NA	NA	NA
WP_019247543.1|254374_255760_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.5e-17
WP_010929706.1|255690_256227_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_010929707.1|256378_257770_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_010929708.1|257786_258767_-	AEC family transporter	NA	NA	NA	NA	NA
WP_003814324.1|258902_259886_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
WP_010929709.1|259950_260850_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814321.1|260956_262711_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_010929710.1|262718_263843_-	CoA transferase	NA	NA	NA	NA	NA
WP_010929711.1|263856_264837_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929591.1|265567_266518_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929712.1|267077_267623_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929713.1|267706_269326_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_004567834.1|269341_270496_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_003817696.1|270509_270635_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_010929714.1|270631_272383_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
WP_010929715.1|272379_274059_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
WP_085964336.1|274094_274670_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.4e-28
WP_010929717.1|275812_276091_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_005012067.1|277134_278085_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929718.1|278361_278523_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_010929719.1|278530_278671_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815821.1|279189_279639_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
WP_003815819.1|279648_280260_-	stringent starvation protein A	NA	NA	NA	NA	NA
WP_019247426.1|280418_281273_-	cytochrome c1	NA	NA	NA	NA	NA
WP_003815816.1|281292_282675_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_003815815.1|282739_283381_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_010929721.1|283520_283979_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_010927226.1|284003_284780_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_014906092.1|284833_285970_+|protease	trypsin-like serine protease	protease	W5SAB9	Pithovirus	31.2	1.2e-07
WP_005015810.1|285966_286917_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003807705.1|287015_287642_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_003807706.1|287664_288591_-	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA	NA
WP_003819100.1|288599_290186_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929723.1|290182_291187_-	alpha/beta hydrolase	NA	A0A2L2DMU8	Acanthamoeba_polyphaga_mimivirus	31.5	7.5e-30
WP_003807710.1|291386_292247_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010929724.1|292278_293280_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_003819104.1|293350_294160_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003819105.1|294237_296097_+	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
WP_010929725.1|296225_297428_-	MFS transporter	NA	NA	NA	NA	NA
WP_004566082.1|297541_298423_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_004566083.1|299925_300486_-	5'-3'-deoxyribonucleotidase	NA	A0A1E1EUN3	Acanthamoeba_castellanii_mimivirus	30.8	3.2e-14
WP_005013747.1|300545_301496_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP018041	Bordetella pertussis strain J306 chromosome, complete genome	4103205	390850	448359	4103205	transposase	Orpheovirus(14.29%)	52	NA	NA
WP_005012067.1|390850_391801_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154219862.1|391787_391955_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010927231.1|391937_392855_+	reductase	NA	NA	NA	NA	NA
WP_003815842.1|392851_393100_+	glutaredoxin family protein	NA	NA	NA	NA	NA
WP_003815840.1|393096_394302_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486045.1|394374_395370_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486046.1|395392_396613_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486047.1|396609_397254_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019248476.1|398984_399794_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014906040.1|400011_401052_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	42.5	6.1e-59
WP_023994705.1|401020_401164_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486049.1|401150_402134_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486050.1|402060_402762_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486051.1|402810_403581_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003819219.1|403577_404819_-	CoA transferase	NA	NA	NA	NA	NA
WP_014486052.1|404923_406630_-	thiamine pyrophosphate-requiring protein	NA	NA	NA	NA	NA
WP_014486053.1|406626_407523_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486054.1|407563_409153_-	sulfurtransferase	NA	NA	NA	NA	NA
WP_003807867.1|409202_410195_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807865.1|410263_410863_-	hypothetical protein	NA	NA	NA	NA	NA
WP_076879611.1|411323_412301_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929577.1|412379_413330_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122777.1|413418_414333_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929782.1|414329_414989_+	LysE family translocator	NA	NA	NA	NA	NA
WP_003814709.1|415078_416002_+	alpha/beta fold hydrolase	NA	A0A1C9C5K3	Heterosigma_akashiwo_virus	27.2	4.8e-07
WP_010929783.1|416007_416463_-	multidrug/biocide efflux PACE transporter	NA	NA	NA	NA	NA
WP_010929784.1|416459_417563_-	ChbG/HpnK family deacetylase	NA	NA	NA	NA	NA
WP_157734656.1|417521_417791_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010927086.1|417750_419370_-	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_003814720.1|419366_420425_-	glycosyltransferase family 2 protein	NA	I1TED8	Salmonella_phage	40.5	2.8e-59
WP_033446199.1|420554_421049_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_022997984.1|421141_422119_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929785.1|422314_423520_+	sodium/glutamate symporter	NA	NA	NA	NA	NA
WP_010929786.1|423516_425028_+	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_003814726.1|425043_426357_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_003814728.1|426547_426727_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814730.1|427136_427871_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
WP_010929577.1|430315_431266_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247421.1|431397_431796_-	GTP-binding protein	NA	E4ZFJ7	Streptococcus_phage	44.3	9.0e-19
WP_003814701.1|432206_432677_-	universal stress protein	NA	NA	NA	NA	NA
WP_003820700.1|432765_433110_-	TIGR01244 family phosphatase	NA	NA	NA	NA	NA
WP_010929788.1|433209_434610_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010929789.1|436398_436917_-	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	38.9	2.1e-12
WP_003814694.1|437027_437783_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	40.8	2.9e-42
WP_003814691.1|437978_439211_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929791.1|439203_439989_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_003814685.1|440055_441027_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003814681.1|441037_442015_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247419.1|442140_443313_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010929793.1|443339_444368_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003814674.1|444433_445627_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_005012067.1|447408_448359_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP018041	Bordetella pertussis strain J306 chromosome, complete genome	4103205	590412	651602	4103205	transposase,protease	uncultured_Mediterranean_phage(40.0%)	57	NA	NA
WP_005013747.1|590412_591363_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446133.1|591838_592729_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_010931496.1|592725_593547_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_019247235.1|593745_594237_+	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_019247236.1|594255_595329_+	CHAD domain-containing protein	NA	NA	NA	NA	NA
WP_023853086.1|595375_596479_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
WP_003808577.1|596554_597175_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_003808574.1|597195_597705_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	42.1	1.2e-28
WP_003808570.1|597759_598011_+	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	53.4	1.6e-18
WP_010931494.1|598074_599208_+	benzoate/H(+) symporter BenE family transporter	NA	NA	NA	NA	NA
WP_003808567.1|599215_599602_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931493.1|599598_602118_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003808563.1|602546_602885_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003808562.1|602881_603388_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_010931492.1|603449_604250_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931491.1|604360_605302_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931490.1|605395_606931_-	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931489.1|608610_610461_-	dipeptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.2	1.6e-17
WP_003808549.1|610464_611298_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931488.1|611297_612239_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003808546.1|612490_613486_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931486.1|613603_615892_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003808542.1|616198_617107_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010931485.1|617161_618127_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931484.1|618201_619863_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_023853074.1|619859_620645_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_154698388.1|620611_620776_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|620793_621744_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814152.1|622442_622826_+	membrane protein	NA	NA	NA	NA	NA
WP_010927005.1|622883_623486_+	DUF2946 family protein	NA	NA	NA	NA	NA
WP_003820995.1|623503_623905_-	DoxX family protein	NA	NA	NA	NA	NA
WP_003814158.1|624038_624932_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931481.1|624928_625510_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_003814165.1|626304_627039_+	arginyltransferase	NA	NA	NA	NA	NA
WP_010931480.1|627079_628129_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_003814172.1|628276_628855_-	TIGR01841 family phasin	NA	NA	NA	NA	NA
WP_010931479.1|629241_630219_+	tripartite tricarboxylate transporter substrate binding protein BugD	NA	NA	NA	NA	NA
WP_010931478.1|630312_634707_-	dermonecrotic toxin	NA	NA	NA	NA	NA
WP_003814178.1|634907_635756_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931477.1|635914_636727_-	competence/damage-inducible protein A	NA	NA	NA	NA	NA
WP_005015810.1|636782_637733_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154219861.1|637719_637884_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931453.1|637831_638632_-	EI24 domain-containing protein	NA	NA	NA	NA	NA
WP_003814185.1|638693_639077_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_010931454.1|639088_640522_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	1.5e-52
WP_003814188.1|640728_641058_-	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_003814191.1|641060_641729_-	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010931456.1|641992_642913_+	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_003814195.1|642959_643172_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931457.1|643194_643617_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931458.1|643633_644734_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010931459.1|644830_646348_-|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_003814203.1|646423_647263_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_003814205.1|647284_648166_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814206.1|648247_649342_-	porin	NA	NA	NA	NA	NA
WP_076879617.1|649635_650586_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166340.1|650660_651602_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NZ_CP018041	Bordetella pertussis strain J306 chromosome, complete genome	4103205	656920	703116	4103205	tail,transposase,tRNA,terminase	uncultured_Caudovirales_phage(17.39%)	52	NA	NA
WP_003814219.1|656920_657952_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814221.1|657992_658232_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931464.1|658301_659891_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_010931465.1|659890_660439_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_003814226.1|660519_661092_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010927008.1|661110_662022_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814230.1|662095_663064_-	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010931466.1|663186_664260_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_010931467.1|664264_666085_-	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_023995786.1|667097_667259_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446132.1|667199_667535_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_003819076.1|667668_668319_+	carbonic anhydrase	NA	NA	NA	NA	NA
WP_010931468.1|668340_669759_-	amidase	NA	NA	NA	NA	NA
WP_019248554.1|669828_670584_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247734.1|670552_671311_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931471.1|671321_672203_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931472.1|672219_672927_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931473.1|672929_673688_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931474.1|673897_675640_+	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010925795.1|675632_676157_+	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931475.1|676196_676991_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248926.1|677158_678232_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|678330_679281_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931452.1|679532_679745_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931451.1|679810_680422_-	S24 family peptidase	NA	NA	NA	NA	NA
WP_010931450.1|680901_681222_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931449.1|681214_681913_-	membrane protein	NA	NA	NA	NA	NA
WP_023853183.1|681927_682149_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|682166_683117_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931448.1|683792_684242_+|terminase	terminase	terminase	C7U0W1	Enterobacteria_phage	61.5	5.2e-39
WP_010931447.1|684228_685506_+|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_010931446.1|685508_686927_+	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931445.1|686955_688011_+	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931444.1|688016_688259_+	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931443.1|688381_688984_+	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_005012808.1|689412_690363_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853024.1|690380_691028_+	hypothetical protein	NA	R9TJ64	Synechococcus_phage	71.1	2.7e-65
WP_010931442.1|691037_691289_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|691351_691834_+	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_010931440.1|691835_692036_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931439.1|692035_692431_+	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_010931438.1|692427_692826_+	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931437.1|692822_693245_+	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_010931436.1|693252_693753_+	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931435.1|694007_694526_+	hypothetical protein	NA	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_003813412.1|694535_694865_+	hypothetical protein	NA	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931434.1|694882_695173_+	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_010931433.1|695198_697811_+|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931432.1|697820_698180_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931431.1|698247_698781_+	DUF1833 family protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931430.1|698777_699167_+	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931429.1|699159_703116_+	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
>prophage 6
NZ_CP018041	Bordetella pertussis strain J306 chromosome, complete genome	4103205	720305	779357	4103205	transposase	Streptococcus_phage(66.67%)	48	NA	NA
WP_005012808.1|720305_721256_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814416.1|723534_724623_+	spore maturation protein	NA	NA	NA	NA	NA
WP_003814419.1|724625_726068_-	pyruvate kinase	NA	NA	NA	NA	NA
WP_010931414.1|726172_727318_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
WP_010931413.1|727349_728147_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010931412.1|728171_729731_-	chaperone SurA	NA	NA	NA	NA	NA
WP_010931411.1|729727_732100_-	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_010931410.1|732209_733313_+	phosphotransferase	NA	NA	NA	NA	NA
WP_010931409.1|733312_734005_+	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_003814436.1|734148_734850_+	membrane protein	NA	NA	NA	NA	NA
WP_003814437.1|734834_735212_-	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_023852750.1|736879_737023_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814441.1|737052_737925_-	oxaloacetate decarboxylase	NA	NA	NA	NA	NA
WP_003814443.1|738265_738484_+	DUF1059 domain-containing protein	NA	NA	NA	NA	NA
WP_019247242.1|738523_739903_-	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_010929976.1|739944_741342_-	amidase family protein	NA	NA	NA	NA	NA
WP_010927038.1|741381_743034_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.8	6.0e-16
WP_010929977.1|743037_743922_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929978.1|743921_744863_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929979.1|744941_746561_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929980.1|746727_747543_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814459.1|747610_748180_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|748180_749131_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814461.1|749785_750883_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
WP_003814462.1|750916_752182_+	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929591.1|752338_753289_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929982.1|753532_754123_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_010929983.1|754138_756583_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_003814467.1|756702_757674_-	FecR family protein	NA	NA	NA	NA	NA
WP_023852739.1|757805_758330_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_005012067.1|758289_759240_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929984.1|759461_761657_-	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
WP_020699729.1|761729_762137_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_077068980.1|762084_762273_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|762259_763210_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003807452.1|763325_763769_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010925762.1|763831_764626_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003807457.1|764791_765928_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	44.8	5.8e-63
WP_003807459.1|765998_767132_-	GTPase ObgE	NA	NA	NA	NA	NA
WP_003807460.1|767281_767542_-	50S ribosomal protein L27	NA	NA	NA	NA	NA
WP_003807462.1|767575_767887_-	50S ribosomal protein L21	NA	NA	NA	NA	NA
WP_010929987.1|768311_769460_+	fumarylacetoacetate hydrolase	NA	NA	NA	NA	NA
WP_010929988.1|769574_770540_+	octaprenyl diphosphate synthase	NA	NA	NA	NA	NA
WP_010929989.1|770808_771675_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929990.1|771805_773854_+	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010929991.1|773871_775869_+	hydantoinase B/oxoprolinase family protein	NA	NA	NA	NA	NA
WP_010929992.1|775903_777241_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_023853308.1|777503_779357_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 7
NZ_CP018041	Bordetella pertussis strain J306 chromosome, complete genome	4103205	885798	953772	4103205	transposase	Bacillus_phage(33.33%)	58	NA	NA
WP_023994644.1|885798_886815_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003813988.1|887011_887995_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930019.1|889593_890982_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003813991.1|891012_892002_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813992.1|892112_893345_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003813993.1|893626_894427_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930018.1|894449_896681_-	BCCT family transporter	NA	NA	NA	NA	NA
WP_010930017.1|897468_897915_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_003813996.1|897936_898683_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_003813997.1|898826_899804_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
WP_010930016.1|900437_901049_+	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
WP_003813999.1|901042_902260_-	threonine ammonia-lyase	NA	NA	NA	NA	NA
WP_005013747.1|902400_903351_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814000.1|903347_904067_-	lipoprotein	NA	NA	NA	NA	NA
WP_003821234.1|904187_906347_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_003814002.1|906437_906707_-	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_005019401.1|906795_907002_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814003.1|907000_907528_+	lipoprotein	NA	NA	NA	NA	NA
WP_003814004.1|907546_908326_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930015.1|908493_909510_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_003814006.1|909582_910074_-	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_003814007.1|910084_911800_-	acetolactate synthase 3 catalytic subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	30.3	3.1e-60
WP_005012067.1|912963_913914_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248601.1|913910_915761_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
WP_010930052.1|916141_916801_+	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
WP_010930053.1|916888_917041_+	vir-repressed protein	NA	NA	NA	NA	NA
WP_003809770.1|917149_917317_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930054.1|917328_918009_-	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
WP_010930055.1|918290_919007_+	flagellar brake protein	NA	NA	NA	NA	NA
WP_010930056.1|919021_920323_-	phospholipase	NA	NA	NA	NA	NA
WP_029444137.1|922467_925356_+	HD domain-containing protein	NA	NA	NA	NA	NA
WP_010930057.1|925579_926932_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_004568140.1|926960_927482_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_003819989.1|927478_928933_+	carboxylase	NA	NA	NA	NA	NA
WP_023852826.1|928967_929216_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247557.1|929321_930197_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010930060.1|930222_931278_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930061.1|931290_932082_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930062.1|932114_933485_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_005012067.1|934660_935611_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930064.1|935663_935885_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810832.1|936044_936257_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810835.1|936376_937495_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_003810837.1|937591_937807_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810839.1|938000_938252_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930066.1|938363_939314_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810840.1|939310_939694_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_010930067.1|939748_941566_-	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
WP_010930068.1|941712_942540_+	oxidoreductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
WP_010930069.1|942585_943566_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_003810850.1|943562_943775_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810851.1|943771_944953_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_019248496.1|945116_945851_+	serine/threonine protein phosphatase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
WP_010930071.1|945852_948465_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_003810859.1|948600_950514_-	S9 family peptidase	NA	NA	NA	NA	NA
WP_010930072.1|951129_951540_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003810865.1|951637_952723_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_005012067.1|952821_953772_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 8
NZ_CP018041	Bordetella pertussis strain J306 chromosome, complete genome	4103205	976950	1047222	4103205	transposase	Streptococcus_phage(14.29%)	57	NA	NA
WP_005012067.1|976950_977901_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486062.1|977981_978893_+	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	38.8	8.0e-47
WP_010930108.1|978953_980099_-	lytic murein transglycosylase B	NA	NA	NA	NA	NA
WP_003821521.1|980118_981033_+	histone deacetylase family protein	NA	A0A2K9KZC4	Tupanvirus	34.7	9.8e-45
WP_010930110.1|981104_981854_+	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
WP_010930111.1|981853_982783_+	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA	NA
WP_003821527.1|983026_984853_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003813333.1|984935_985577_+	peroxiredoxin	NA	NA	NA	NA	NA
WP_003821528.1|985766_986801_+	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930112.1|988637_989702_+	sulfate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.3	3.8e-24
WP_010930113.1|990499_991408_+	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA	NA
WP_023852693.1|992900_994175_+	PA0069 family radical SAM protein	NA	NA	NA	NA	NA
WP_023852686.1|994328_994709_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014905652.1|994716_995589_-	EamA family transporter	NA	NA	NA	NA	NA
WP_003813315.1|995894_996275_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_003813314.1|996485_997211_+	CoA pyrophosphatase	NA	NA	NA	NA	NA
WP_005012067.1|997306_998257_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930118.1|998361_999411_+	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
WP_010929632.1|999548_1000565_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010926548.1|1002073_1002646_-	chorismate lyase	NA	NA	NA	NA	NA
WP_010930119.1|1002705_1003437_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_029443805.1|1003488_1004406_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930121.1|1005213_1008393_+	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_014486063.1|1008389_1009772_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010930123.1|1009841_1010093_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_023853098.1|1010238_1010889_-	SCO family protein	NA	NA	NA	NA	NA
WP_019248379.1|1011039_1013154_-	M3 family metallopeptidase	NA	NA	NA	NA	NA
WP_003811948.1|1013229_1014081_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
WP_010930126.1|1014077_1014704_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003817147.1|1014700_1016455_-	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_010930127.1|1016747_1019453_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_010930128.1|1019465_1021127_+	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
WP_010930129.1|1021139_1022930_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
WP_003817151.1|1023151_1024327_-	FliC/FljB family flagellin	NA	NA	NA	NA	NA
WP_010929584.1|1024369_1025320_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930130.1|1025418_1026159_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_010930131.1|1026353_1028390_+	transketolase	NA	NA	NA	NA	NA
WP_010930132.1|1028407_1029418_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_010930133.1|1029535_1030729_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_010930134.1|1030758_1031532_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010930135.1|1031528_1032719_-	acetate kinase	NA	NA	NA	NA	NA
WP_003809454.1|1032744_1033683_-	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_010930136.1|1033679_1036028_-	DUF3141 domain-containing protein	NA	NA	NA	NA	NA
WP_029443834.1|1036182_1036890_-	glutathione transferase	NA	NA	NA	NA	NA
WP_023853531.1|1036927_1038061_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994624.1|1038153_1038306_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930138.1|1038337_1038886_-	diguanylate cyclase	NA	NA	NA	NA	NA
WP_003819814.1|1038904_1039390_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930139.1|1039567_1040506_+	DnaJ domain-containing protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
WP_003809467.1|1040508_1040826_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247197.1|1040871_1041816_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010930141.1|1043496_1044147_+	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
WP_003809479.1|1044200_1044536_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930142.1|1044532_1045393_+	M23 family metallopeptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
WP_003819817.1|1045409_1045691_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003809486.1|1045764_1046028_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_005012067.1|1046271_1047222_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_CP018041	Bordetella pertussis strain J306 chromosome, complete genome	4103205	1059439	1116821	4103205	holin,transposase,tRNA	uncultured_Mediterranean_phage(37.5%)	47	NA	NA
WP_010931363.1|1059439_1060456_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003819773.1|1061286_1062294_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_014486064.1|1062290_1063934_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_023995116.1|1063930_1064833_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003809396.1|1064958_1065432_-	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_010930151.1|1065421_1066444_-	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
WP_015041211.1|1066440_1067868_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010931363.1|1068805_1069822_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003809411.1|1070154_1071090_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.5	3.0e-41
WP_010930154.1|1071139_1073020_-	protein translocase subunit SecD	NA	NA	NA	NA	NA
WP_003809416.1|1073086_1073431_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.4	1.0e-10
WP_010930155.1|1073575_1074712_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
WP_023853534.1|1074708_1075782_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_003809423.1|1075939_1077376_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_010930157.1|1077466_1078108_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_023853536.1|1078443_1079460_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930160.1|1082606_1084028_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_003809431.1|1084291_1085008_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003809432.1|1085092_1085410_+	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003819794.1|1085450_1085864_+|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_010930161.1|1085865_1086225_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853525.1|1086267_1087812_-	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
WP_010930163.1|1087895_1088726_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_010930164.1|1088760_1089915_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_010930165.1|1089957_1090830_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486065.1|1090946_1093235_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003809441.1|1094441_1094906_+	barstar family protein	NA	NA	NA	NA	NA
WP_005013747.1|1094932_1095883_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154698393.1|1095900_1096038_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930167.1|1096250_1097027_-	phosphate ABC transporter ATP-binding protein PstB	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
WP_003809638.1|1097071_1097929_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_010930169.1|1097950_1098967_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_014486066.1|1099101_1100142_-	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
WP_010930171.1|1100336_1102418_-	polyphosphate kinase 1	NA	NA	NA	NA	NA
WP_010930172.1|1102653_1104147_+	exopolyphosphatase	NA	NA	NA	NA	NA
WP_003809629.1|1104377_1105172_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003819875.1|1105392_1106751_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_010930173.1|1106747_1107590_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
WP_010930174.1|1107608_1109495_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
WP_010930175.1|1109732_1110365_-	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
WP_003809618.1|1110383_1110986_+	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
WP_023995509.1|1110989_1111151_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|1111137_1112088_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930177.1|1112890_1113691_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812707.1|1113734_1114721_-	homoserine kinase	NA	NA	NA	NA	NA
WP_010930178.1|1114860_1115874_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_005012067.1|1115870_1116821_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP018041	Bordetella pertussis strain J306 chromosome, complete genome	4103205	1445864	1501351	4103205	transposase,protease	Mollivirus(16.67%)	56	NA	NA
WP_005012067.1|1445864_1446815_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811846.1|1448016_1448463_-	flagellar export protein FliJ	NA	NA	NA	NA	NA
WP_019247562.1|1448455_1449931_-	flagellar protein export ATPase FliI	NA	NA	NA	NA	NA
WP_010930338.1|1449927_1450683_-	flagellar assembly protein FliH	NA	NA	NA	NA	NA
WP_003817203.1|1450675_1451686_-	flagellar motor switch protein FliG	NA	NA	NA	NA	NA
WP_010930339.1|1451675_1453352_-	flagellar basal body M-ring protein FliF	NA	NA	NA	NA	NA
WP_010930340.1|1453664_1453997_+	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA	NA
WP_010930341.1|1454010_1454406_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930342.1|1454415_1454742_-	flagellar biosynthesis protein FlhB	NA	NA	NA	NA	NA
WP_019247563.1|1454738_1455065_-	flagellar hook-length control protein FliK	NA	NA	NA	NA	NA
WP_023997203.1|1454991_1455405_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811825.1|1456009_1456390_-	flagellar protein FliT	NA	NA	NA	NA	NA
WP_010930344.1|1456407_1456836_-	flagellar export chaperone FliS	NA	NA	NA	NA	NA
WP_010930345.1|1456843_1458217_-	flagellar filament capping protein FliD	NA	NA	NA	NA	NA
WP_003817216.1|1458357_1458735_-	flagellar protein FlaG	NA	NA	NA	NA	NA
WP_010930346.1|1458997_1460305_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_023852965.1|1460365_1461196_+	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_003811815.1|1461192_1461681_+	CvpA family protein	NA	NA	NA	NA	NA
WP_003811814.1|1461722_1463243_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	43.7	4.8e-97
WP_003811812.1|1463286_1463763_-	disulfide bond formation protein B	NA	NA	NA	NA	NA
WP_010930348.1|1464566_1467164_-	[protein-PII] uridylyltransferase	NA	NA	NA	NA	NA
WP_003811806.1|1467193_1468015_-	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
WP_003811803.1|1468741_1469491_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
WP_003811801.1|1469623_1470553_+	elongation factor Ts	NA	NA	NA	NA	NA
WP_010930349.1|1470650_1471367_+	UMP kinase	NA	NA	NA	NA	NA
WP_003811796.1|1471381_1471942_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_010926572.1|1471979_1472873_+	di-trans,poly-cis-decaprenylcistransferase	NA	R9W0U9	Flavobacterium_phage	36.1	2.0e-18
WP_010930351.1|1472892_1473750_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003811788.1|1473746_1474946_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_010930352.1|1474985_1476320_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_010930353.1|1476372_1478709_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
WP_003811782.1|1478834_1479398_+	OmpH family outer membrane protein	NA	NA	NA	NA	NA
WP_010930354.1|1479406_1480498_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
WP_003811776.1|1480569_1481025_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA	NA
WP_010930355.1|1481025_1481820_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
WP_010930356.1|1481816_1482998_+	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
WP_003811770.1|1482984_1483590_+	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	40.2	8.8e-26
WP_003811768.1|1483586_1484360_+	RNA methyltransferase	NA	NA	NA	NA	NA
WP_010930357.1|1484371_1485199_-	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
WP_010930358.1|1485360_1487724_+	phosphoenolpyruvate synthase	NA	A0A1V0SGR7	Hokovirus	35.9	2.2e-165
WP_010930359.1|1487791_1488511_-	glutamine amidotransferase	NA	NA	NA	NA	NA
WP_003811761.1|1488634_1489060_+	membrane protein	NA	NA	NA	NA	NA
WP_005012067.1|1489094_1490045_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811759.1|1490162_1491089_+	paraslipin	NA	NA	NA	NA	NA
WP_010930360.1|1491154_1492312_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
WP_003811754.1|1492292_1492760_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
WP_010930800.1|1492907_1493858_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811752.1|1493874_1494309_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_003811750.1|1494298_1494649_+	RnfH family protein	NA	NA	NA	NA	NA
WP_003811748.1|1494845_1496000_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003811746.1|1495996_1497169_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003811743.1|1497216_1498110_+	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003811741.1|1498155_1498593_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_010930362.1|1498652_1499342_+	VIT family protein	NA	NA	NA	NA	NA
WP_010929577.1|1499351_1500302_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879624.1|1500400_1501351_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 11
NZ_CP018041	Bordetella pertussis strain J306 chromosome, complete genome	4103205	1597805	1664134	4103205	transposase	Streptococcus_virus(11.11%)	58	NA	NA
WP_005012067.1|1597805_1598756_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994932.1|1598762_1599875_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
WP_010930419.1|1600561_1601764_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930420.1|1601967_1604628_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930421.1|1604640_1608045_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_023995689.1|1608712_1610938_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.5	1.2e-43
WP_010930423.1|1610984_1611311_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_010930424.1|1611361_1611970_+	recombination protein RecR	NA	NA	NA	NA	NA
WP_005013747.1|1612068_1613019_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930425.1|1613088_1613853_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930426.1|1613849_1614449_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003820094.1|1614552_1615398_-	putative membrane protein	NA	A0A1I9SA48	Rhodococcus_phage	35.3	7.0e-37
WP_010928449.1|1615463_1616090_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
WP_005012067.1|1616086_1617037_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077068977.1|1617023_1617212_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930428.1|1617135_1618257_-	DUF1513 domain-containing protein	NA	NA	NA	NA	NA
WP_019248041.1|1618237_1619239_-	imelysin family protein	NA	NA	NA	NA	NA
WP_019247498.1|1619344_1620856_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_023853587.1|1620852_1622157_-	imelysin	NA	NA	NA	NA	NA
WP_010930431.1|1622268_1622829_-	membrane protein	NA	NA	NA	NA	NA
WP_010930432.1|1623096_1623651_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	32.0	1.7e-15
WP_010930433.1|1624106_1624322_-	dodecin domain-containing protein	NA	NA	NA	NA	NA
WP_033446228.1|1624576_1627174_+	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	22.6	1.5e-21
WP_010930435.1|1627170_1628358_+	cupin	NA	NA	NA	NA	NA
WP_010930436.1|1629016_1629631_+	serotype 3 fimbrial subunit	NA	NA	NA	NA	NA
WP_010930437.1|1629719_1630847_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA	NA
WP_033446216.1|1630858_1631764_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_023994753.1|1632514_1632670_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1632656_1633607_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930439.1|1633788_1634541_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
WP_003811112.1|1634609_1635269_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
WP_003811113.1|1635265_1635994_+	glutamine ABC transporter ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	39.3	3.3e-35
WP_010930440.1|1636006_1638286_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	32.1	5.9e-06
WP_010930441.1|1638310_1638514_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_003811129.1|1638555_1639203_-	guanylate kinase	NA	A0A218KC48	Bacillus_phage	33.9	3.1e-13
WP_010930443.1|1639323_1640241_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_010930444.1|1640237_1640951_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_003811135.1|1641188_1641959_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003811137.1|1641963_1642563_-	C40 family peptidase	NA	A0A0A8WF62	Clostridium_phage	41.6	1.4e-20
WP_003811138.1|1642807_1644298_+	AMP nucleosidase	NA	NA	NA	NA	NA
WP_010926696.1|1644356_1644641_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010928840.1|1644637_1644766_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930445.1|1644778_1644934_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811148.1|1645206_1646133_-	YicC family protein	NA	NA	NA	NA	NA
WP_003811149.1|1646269_1647010_+	ribonuclease PH	NA	NA	NA	NA	NA
WP_010930446.1|1647176_1648553_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003811152.1|1648734_1649640_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930448.1|1651291_1653094_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_003811159.1|1653211_1653862_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA	NA
WP_005012808.1|1653960_1654911_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930450.1|1654932_1656153_+	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
WP_003811164.1|1656338_1657751_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_003811167.1|1657814_1658882_+	PAS domain-containing protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
WP_003811170.1|1658878_1660369_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
WP_010930452.1|1660378_1661323_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811176.1|1661482_1662181_+	pirin family protein	NA	NA	NA	NA	NA
WP_010930453.1|1662258_1663164_+	pirin family protein	NA	NA	NA	NA	NA
WP_005012067.1|1663183_1664134_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NZ_CP018041	Bordetella pertussis strain J306 chromosome, complete genome	4103205	1700083	1763919	4103205	transposase	Brazilian_cedratvirus(25.0%)	54	NA	NA
WP_005013747.1|1700083_1701034_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930486.1|1701092_1701866_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486074.1|1701858_1703415_+	LTA synthase family protein	NA	NA	NA	NA	NA
WP_005013747.1|1703411_1704362_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810741.1|1705687_1706290_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003810743.1|1706529_1707231_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003816696.1|1707224_1708007_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_005012808.1|1708191_1709142_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_153302777.1|1709128_1709290_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930483.1|1709240_1709978_-	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_010926609.1|1710167_1710926_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930482.1|1710972_1711962_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930481.1|1712139_1713108_-	transporter	NA	NA	NA	NA	NA
WP_010930480.1|1714647_1715616_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930479.1|1715624_1716566_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930478.1|1717039_1718050_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930477.1|1718040_1719555_+	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930476.1|1719551_1720898_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930475.1|1720900_1721935_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_023852967.1|1721984_1723610_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_005012067.1|1724162_1725113_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930487.1|1725217_1726165_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247865.1|1726218_1728033_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_010930489.1|1728025_1728700_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_023995112.1|1728829_1731904_+	autotransporter SphB2	NA	NA	NA	NA	NA
WP_019247905.1|1731917_1732217_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010930492.1|1732531_1733155_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_010930493.1|1733398_1734268_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010930494.1|1734245_1735190_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930495.1|1735275_1736247_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930496.1|1736314_1737088_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930497.1|1737084_1738281_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010930498.1|1738311_1739262_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_010930499.1|1739483_1740173_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930500.1|1740237_1740993_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930501.1|1741044_1742037_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930502.1|1742046_1743000_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811538.1|1743115_1744078_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019249376.1|1745479_1745908_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|1745904_1746855_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930503.1|1747148_1747871_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
WP_010930504.1|1748309_1749497_-	MFS transporter	NA	NA	NA	NA	NA
WP_019249653.1|1749500_1749881_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930506.1|1751600_1752572_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930507.1|1752585_1753299_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930508.1|1753303_1754221_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811452.1|1754327_1754624_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930509.1|1756830_1759764_+	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA	NA
WP_003810969.1|1759763_1760108_+	Na+/H+ antiporter subunit C	NA	NA	NA	NA	NA
WP_004568496.1|1760104_1761733_+	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA	NA
WP_010930510.1|1761729_1762209_+	Na+/H+ antiporter subunit E	NA	NA	NA	NA	NA
WP_003810975.1|1762205_1762490_+	K+/H+ antiporter subunit F	NA	NA	NA	NA	NA
WP_010930511.1|1762486_1762813_+	cation:proton antiporter	NA	NA	NA	NA	NA
WP_005013747.1|1762968_1763919_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP018041	Bordetella pertussis strain J306 chromosome, complete genome	4103205	2037172	2090410	4103205	transposase	Erysipelothrix_phage(33.33%)	46	NA	NA
WP_010930730.1|2037172_2038123_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930731.1|2038993_2039866_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930732.1|2039943_2041083_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_029443722.1|2041432_2042698_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_003816691.1|2042703_2043231_+	aromatic-ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
WP_003816690.1|2043235_2044054_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003816687.1|2044053_2044776_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930735.1|2044797_2045112_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA	NA
WP_029443721.1|2045108_2046278_+	CoA transferase	NA	NA	NA	NA	NA
WP_010930737.1|2046308_2047184_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816680.1|2047180_2048500_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_014486081.1|2048572_2049769_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
WP_010930739.1|2049779_2051267_-	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_010930740.1|2053861_2054761_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_023852887.1|2054898_2055864_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005015810.1|2055962_2056913_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812024.1|2058079_2058382_-	SelT/SelW/SelH family protein	NA	NA	NA	NA	NA
WP_003812026.1|2058541_2058946_+	group III truncated hemoglobin	NA	NA	NA	NA	NA
WP_010930743.1|2058938_2060165_+	NnrS family protein	NA	NA	NA	NA	NA
WP_003812030.1|2060161_2060608_+	membrane protein	NA	NA	NA	NA	NA
WP_003812032.1|2060677_2061460_+	exodeoxyribonuclease III	NA	NA	NA	NA	NA
WP_010930744.1|2061501_2063007_+	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_047122807.1|2063292_2064087_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930745.1|2065563_2066385_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_010930746.1|2066403_2067258_-	polysaccharide deacetylase	NA	NA	NA	NA	NA
WP_003812044.1|2067261_2068233_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_157834996.1|2068271_2069255_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|2069579_2070530_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812172.1|2071667_2071964_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247707.1|2072138_2073491_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	2.9e-45
WP_010930153.1|2073633_2074650_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930748.1|2076629_2077643_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_010930749.1|2077729_2078635_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003812179.1|2078791_2079136_+	exported protein	NA	NA	NA	NA	NA
WP_010930750.1|2079293_2079752_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_010930751.1|2079765_2081982_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_003812183.1|2081978_2083040_+	XdhC family protein	NA	NA	NA	NA	NA
WP_010930752.1|2083068_2084043_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930753.1|2083994_2084813_-	hypothetical protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	28.8	2.3e-16
WP_003812191.1|2084825_2085434_-	peptidase S16	NA	NA	NA	NA	NA
WP_010930754.1|2085608_2086004_+	VOC family protein	NA	NA	NA	NA	NA
WP_010930755.1|2086022_2087462_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	37.4	7.4e-55
WP_003812199.1|2087490_2087838_+	GFA family protein	NA	NA	NA	NA	NA
WP_010929577.1|2087856_2088807_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154299520.1|2088793_2088955_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2089459_2090410_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_CP018041	Bordetella pertussis strain J306 chromosome, complete genome	4103205	2111103	2161355	4103205	transposase,protease,tRNA	Klosneuvirus(22.22%)	49	NA	NA
WP_005012067.1|2111103_2112054_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930769.1|2113026_2113386_-	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_010930770.1|2113373_2114810_-	dethiobiotin synthase	NA	NA	NA	NA	NA
WP_010930771.1|2114806_2115460_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_076879572.1|2115456_2116656_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
WP_010930773.1|2116753_2118028_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
WP_005012067.1|2118024_2118975_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_153302783.1|2118961_2119105_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930774.1|2119141_2120116_+	membrane protein	NA	NA	NA	NA	NA
WP_003810379.1|2120112_2120256_+	cbb3-type cytochrome oxidase assembly protein CcoS	NA	NA	NA	NA	NA
WP_003810383.1|2121877_2122540_+	cytochrome-c oxidase, cbb3-type subunit II	NA	NA	NA	NA	NA
WP_003818560.1|2122542_2122719_+	cytochrome oxidase	NA	NA	NA	NA	NA
WP_010930775.1|2122715_2123654_+	cytochrome-c oxidase, cbb3-type subunit III	NA	NA	NA	NA	NA
WP_010930776.1|2123745_2125236_+	cytochrome c oxidase accessory protein CcoG	NA	NA	NA	NA	NA
WP_010930777.1|2125321_2125474_+	lipoprotein	NA	NA	NA	NA	NA
WP_010930778.1|2125487_2125727_+	membrane protein	NA	NA	NA	NA	NA
WP_010930779.1|2125822_2126566_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_019248115.1|2126574_2127099_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930781.1|2127197_2128121_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.6	1.6e-23
WP_003810400.1|2128117_2128879_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930782.1|2128894_2129980_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_076879573.1|2129992_2130193_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2130179_2131130_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_047122784.1|2131089_2131503_-	transcriptional regulator	NA	A0A222YXG1	Escherichia_phage	59.0	3.8e-36
WP_003816708.1|2131787_2132087_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003816717.1|2132496_2134665_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	30.1	3.1e-36
WP_124740709.1|2135244_2135439_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930784.1|2135464_2137495_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	41.9	1.0e-65
WP_006218592.1|2137514_2137727_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_003810720.1|2138004_2138544_-	phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_010930785.1|2138657_2139965_-	adenylosuccinate synthase	NA	A0A160ER07	Powai_lake_megavirus	33.5	3.0e-63
WP_010930786.1|2140029_2141187_-	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
WP_010930787.1|2141370_2142270_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_010930788.1|2142288_2143593_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_010930789.1|2143558_2144665_-	GTPase HflX	NA	NA	NA	NA	NA
WP_003810707.1|2144752_2144989_-	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_010930790.1|2145127_2146198_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
WP_003810703.1|2146201_2147557_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
WP_003810701.1|2147583_2148744_-	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
WP_010930791.1|2148746_2149385_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_010930792.1|2149386_2150691_-|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930793.1|2150731_2152027_-	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_003810693.1|2152033_2152540_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_004568542.1|2152536_2153685_-	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_003810689.1|2153712_2154138_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
WP_010930794.1|2154460_2157343_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
WP_023852900.1|2157435_2158191_-	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_010930796.1|2158956_2160306_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_076879566.1|2160404_2161355_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP018041	Bordetella pertussis strain J306 chromosome, complete genome	4103205	2197604	2263153	4103205	transposase,protease,tRNA	Lake_Baikal_phage(20.0%)	59	NA	NA
WP_010929577.1|2197604_2198555_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_153302779.1|2198541_2198700_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930573.1|2198755_2199565_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_005013747.1|2199689_2200640_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930572.1|2200636_2201530_-	methylglyoxal synthase	NA	NA	NA	NA	NA
WP_003812452.1|2201654_2201849_-	Fe-S cluster assembly protein IscX	NA	NA	NA	NA	NA
WP_003812453.1|2201848_2202190_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_010930571.1|2202199_2204062_-	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	42.4	3.0e-101
WP_003812456.1|2204191_2204704_-	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA	NA
WP_003812458.1|2204706_2205030_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	52.8	6.8e-25
WP_003812460.1|2205031_2205442_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	79.0	7.5e-53
WP_010930570.1|2205479_2206691_-	IscS subfamily cysteine desulfurase	NA	NA	NA	NA	NA
WP_003812463.1|2206708_2207221_-	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA	NA
WP_010930569.1|2207436_2207928_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
WP_010930568.1|2208180_2210217_-	excinuclease ABC subunit UvrB	NA	NA	NA	NA	NA
WP_019247244.1|2210294_2211497_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_003812472.1|2211547_2212276_+	transcriptional repressor LexA	NA	A0A2H4JG58	uncultured_Caudovirales_phage	50.7	2.8e-10
WP_005012067.1|2213833_2214784_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247934.1|2215354_2215567_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247935.1|2215584_2216316_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812478.1|2216350_2216992_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_023853213.1|2216984_2217701_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010930564.1|2219865_2220642_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930563.1|2220663_2221821_-	thiolase	NA	NA	NA	NA	NA
WP_003812491.1|2221817_2222249_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015063637.1|2222245_2223049_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_029443773.1|2223062_2223518_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_010930560.1|2223530_2224502_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930559.1|2224567_2225791_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247936.1|2226018_2226969_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930557.1|2227092_2229546_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.0	1.5e-220
WP_010930556.1|2229734_2231039_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	53.8	3.2e-129
WP_003812508.1|2231143_2231797_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	57.5	6.8e-56
WP_010930555.1|2231799_2233110_-	trigger factor	NA	NA	NA	NA	NA
WP_076879561.1|2233288_2233867_+	TIGR00645 family protein	NA	K4K6D8	Caulobacter_phage	33.7	1.0e-23
WP_010930553.1|2233978_2234179_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.4	7.4e-14
WP_003812519.1|2234524_2235091_-	DUF924 family protein	NA	NA	NA	NA	NA
WP_010930551.1|2235174_2235378_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.1	1.6e-16
WP_003812524.1|2235684_2236005_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812526.1|2236046_2236328_-	membrane protein	NA	NA	NA	NA	NA
WP_010930550.1|2236402_2237659_-	autotransporter Phg	NA	NA	NA	NA	NA
WP_010930549.1|2238041_2238371_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003812536.1|2239941_2240763_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
WP_010930548.1|2240762_2241902_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
WP_019247938.1|2241908_2242805_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_010930546.1|2242801_2244727_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	31.8	1.1e-66
WP_010926400.1|2245086_2247699_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_003812546.1|2247751_2250052_-	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	35.9	9.9e-110
WP_003812548.1|2250048_2251257_-	aminotransferase	NA	NA	NA	NA	NA
WP_010930545.1|2251518_2251893_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2251889_2252840_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879626.1|2252938_2254933_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.3	4.4e-21
WP_010930543.1|2254992_2255958_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
WP_010930542.1|2255947_2258809_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
WP_010930541.1|2258811_2259318_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
WP_010930540.1|2259422_2260631_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	30.0	3.8e-36
WP_033446178.1|2260632_2261571_-	membrane protein	NA	NA	NA	NA	NA
WP_010930538.1|2261732_2262206_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|2262202_2263153_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
NZ_CP018041	Bordetella pertussis strain J306 chromosome, complete genome	4103205	2684890	2725557	4103205	transposase,tRNA	Salmonella_phage(33.33%)	46	NA	NA
WP_010929591.1|2684890_2685841_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004567479.1|2685951_2686134_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931004.1|2686233_2686830_-	lipoprotein	NA	NA	NA	NA	NA
WP_010931005.1|2687013_2688105_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003812822.1|2688604_2689015_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931006.1|2689073_2689415_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	42.2	2.8e-13
WP_010931007.1|2689420_2691838_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_010926359.1|2691850_2692873_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	38.6	1.0e-26
WP_003812832.1|2692947_2693307_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_003812834.1|2693322_2693520_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_010929584.1|2693855_2694806_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023996094.1|2694792_2694954_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003816756.1|2695000_2695450_+	dUTP diphosphatase	NA	S4TNT3	Salmonella_phage	67.2	3.7e-45
WP_005012808.1|2695446_2696397_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_155120812.1|2696383_2696530_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931008.1|2696507_2697956_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010931009.1|2698070_2698352_-	hypothetical protein	NA	NA	NA	NA	NA
WP_153302789.1|2698304_2698469_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2698455_2699406_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003820420.1|2699650_2700364_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_019247724.1|2700486_2700714_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003816758.1|2701008_2701647_-	DedA family protein	NA	NA	NA	NA	NA
WP_023994671.1|2701719_2702790_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_010929591.1|2702786_2703737_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931012.1|2704151_2704676_-	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
WP_004567322.1|2704679_2704949_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931013.1|2705147_2706209_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931014.1|2706292_2707927_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
WP_010931015.1|2707928_2708732_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931016.1|2708760_2709720_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931017.1|2709723_2711238_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248147.1|2711274_2712279_-	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_033456131.1|2712286_2712520_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931018.1|2712709_2713180_-	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
WP_010931019.1|2713215_2713827_-	LysE family translocator	NA	NA	NA	NA	NA
WP_010931020.1|2713857_2714481_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_010931021.1|2714561_2716094_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010931022.1|2716128_2717370_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931023.1|2717413_2718445_-	alcohol dehydrogenase catalytic domain-containing protein	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
WP_010931024.1|2718441_2719611_-	NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_010931025.1|2719604_2720285_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931026.1|2720446_2721289_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931027.1|2721451_2722423_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931028.1|2722594_2723473_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931029.1|2723495_2724566_-	FUSC family protein	NA	NA	NA	NA	NA
WP_005013747.1|2724606_2725557_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
NZ_CP018041	Bordetella pertussis strain J306 chromosome, complete genome	4103205	2787129	2923840	4103205	transposase,protease	Agrobacterium_phage(14.29%)	103	NA	NA
WP_005012067.1|2787129_2788080_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931066.1|2788076_2795738_-	filamentous hemagglutinin N-terminal domain-containing protein	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
WP_010931067.1|2795978_2800025_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
WP_003816847.1|2800337_2800919_+	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010931068.1|2800915_2802214_+	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010931069.1|2802293_2803322_+	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_076879546.1|2803245_2803596_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010927663.1|2804528_2805479_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931071.1|2805795_2806401_+	fimbrial protein	NA	NA	NA	NA	NA
WP_010931072.1|2806454_2807768_-	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
WP_003813284.1|2807842_2808313_-	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA	NA
WP_010931073.1|2808312_2809101_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
WP_010931074.1|2809111_2810764_-	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA	NA
WP_010929591.1|2810851_2811802_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931075.1|2812963_2813470_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA	NA
WP_003813293.1|2813466_2814231_-	phenylacetate-CoA oxygenase subunit PaaC	NA	NA	NA	NA	NA
WP_010931076.1|2814246_2814531_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA	NA
WP_003813298.1|2814595_2815585_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA	NA
WP_010931077.1|2815756_2816686_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA	NA
WP_003813302.1|2816657_2817344_-	NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
WP_003813303.1|2817377_2817923_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	37.7	2.1e-26
WP_003813306.1|2817967_2819233_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003813309.1|2819229_2820132_+	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA	NA
WP_019247679.1|2821313_2822258_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931079.1|2822352_2823870_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931080.1|2823911_2825540_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_003811986.1|2825647_2826529_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931081.1|2829641_2830016_+	endonuclease	NA	F4YXR7	Roseobacter_phage	54.4	2.1e-25
WP_003812004.1|2830040_2830379_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931082.1|2830422_2832057_-	NAD+ synthase	NA	A0A2L0UZF5	Agrobacterium_phage	36.6	8.3e-87
WP_010931083.1|2832095_2833442_-	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_003812010.1|2833549_2834971_+	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_010931084.1|2835040_2835625_-	nitroreductase	NA	NA	NA	NA	NA
WP_005012067.1|2835727_2836678_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931085.1|2836812_2837919_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010931086.1|2837929_2839027_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
WP_010931087.1|2839171_2840377_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_010931088.1|2840383_2840905_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA	NA
WP_010931089.1|2840901_2841393_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA	NA
WP_003819740.1|2841389_2841641_-	MoaD/ThiS family protein	NA	NA	NA	NA	NA
WP_003819741.1|2841621_2842107_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
WP_010931090.1|2842242_2845704_+	DUF748 domain-containing protein	NA	NA	NA	NA	NA
WP_076879578.1|2845700_2846606_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
WP_010931092.1|2846615_2847047_-	lipoprotein	NA	NA	NA	NA	NA
WP_003809348.1|2847293_2847797_+	peroxiredoxin	NA	M1I839	Pelagibacter_phage	44.1	1.8e-24
WP_023995849.1|2847808_2849275_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931095.1|2849349_2850225_-	membrane protein	NA	NA	NA	NA	NA
WP_023853546.1|2850221_2851229_-	biotin synthase BioB	NA	NA	NA	NA	NA
WP_010931097.1|2851696_2852002_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003819753.1|2852092_2852683_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930525.1|2852873_2853890_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010931098.1|2854081_2856418_-	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	42.8	3.2e-124
WP_003812014.1|2856500_2856935_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_076879566.1|2857033_2857984_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2858082_2859033_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931099.1|2859029_2859824_-	N-formylglutamate deformylase	NA	NA	NA	NA	NA
WP_010931100.1|2859855_2860560_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931101.1|2860634_2861435_-	SURF1 family protein	NA	NA	NA	NA	NA
WP_003809276.1|2861431_2861839_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_003819722.1|2861835_2862477_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_019247695.1|2862469_2864491_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_010931103.1|2865730_2867062_+	MFS transporter	NA	NA	NA	NA	NA
WP_005012067.1|2867058_2868009_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931105.1|2869714_2869981_-	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_003812839.1|2870688_2871027_+	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_077069211.1|2872355_2875340_-	autotransporter BapC	NA	NA	NA	NA	NA
WP_010931107.1|2875578_2876181_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931108.1|2876277_2877567_+	MFS transporter	NA	NA	NA	NA	NA
WP_003812846.1|2877624_2878356_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931109.1|2878352_2879156_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812851.1|2879152_2880241_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|2880237_2881167_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812857.1|2881315_2882461_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_154698391.1|2883449_2883608_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931110.1|2883762_2887584_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010931111.1|2887740_2888409_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_014905522.1|2888413_2890087_-	MCE family protein	NA	NA	NA	NA	NA
WP_003820402.1|2890105_2891425_-	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_023995053.1|2891429_2893781_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.2e-164
WP_010931115.1|2893800_2895969_-	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_010931116.1|2895965_2901155_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_003820400.1|2901244_2901559_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_003812875.1|2901786_2902032_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820399.1|2902126_2902645_+	hypothetical protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_010931117.1|2902744_2903950_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_019247560.1|2904065_2905463_-	chloride channel protein	NA	NA	NA	NA	NA
WP_010931119.1|2905579_2906158_-	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_010931120.1|2906230_2907622_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_005012067.1|2907789_2908740_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812889.1|2909020_2909641_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_010931122.1|2909637_2910051_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_010931123.1|2910047_2911091_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_003812895.1|2911146_2911335_+	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931124.1|2911344_2912109_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_010931125.1|2912199_2912856_+	adenylate kinase	NA	NA	NA	NA	NA
WP_010931126.1|2912947_2913706_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931127.1|2913731_2915333_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931128.1|2915533_2916538_+	DUF4880 domain-containing protein	NA	NA	NA	NA	NA
WP_003812908.1|2916638_2916902_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931129.1|2917019_2917796_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_005012067.1|2918386_2919337_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931130.1|2921720_2922833_-	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_010929584.1|2922889_2923840_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
NZ_CP018041	Bordetella pertussis strain J306 chromosome, complete genome	4103205	2954226	2993415	4103205	transposase	Planktothrix_phage(50.0%)	38	NA	NA
WP_005012067.1|2954226_2955177_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879632.1|2955163_2955409_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023852715.1|2955297_2956194_-	inositol monophosphatase	NA	NA	NA	NA	NA
WP_003814547.1|2958471_2960697_+	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_003814544.1|2960861_2961950_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_019247918.1|2961906_2962560_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931144.1|2962607_2963405_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930176.1|2963936_2964887_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994659.1|2964967_2966116_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|2966172_2967123_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879633.1|2967109_2967328_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814535.1|2967221_2967527_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_003820797.1|2967555_2967990_-	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_010931147.1|2967991_2969236_-	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003820799.1|2969232_2969943_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_033446288.1|2969957_2970869_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931149.1|2971231_2971636_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247890.1|2971632_2972091_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247891.1|2972097_2973006_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931150.1|2973002_2973869_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_003814524.1|2973855_2974683_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003820806.1|2974693_2975821_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_023852748.1|2976898_2978137_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931152.1|2978178_2979441_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010931153.1|2979447_2980200_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_019248355.1|2980251_2980437_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003820813.1|2980712_2981177_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_003820814.1|2981208_2981868_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_010931154.1|2982012_2984121_+	AsmA family protein	NA	NA	NA	NA	NA
WP_023852714.1|2984117_2985068_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931155.1|2985171_2985792_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003820818.1|2985895_2986636_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019248356.1|2987770_2988895_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247402.1|2988940_2989309_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2989550_2990501_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247492.1|2991536_2992079_-	hypothetical protein	NA	NA	NA	NA	NA
WP_124740747.1|2992271_2992478_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|2992464_2993415_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
NZ_CP018041	Bordetella pertussis strain J306 chromosome, complete genome	4103205	3397719	3442790	4103205	transposase,tRNA	Staphylococcus_phage(20.0%)	40	NA	NA
WP_005012067.1|3397719_3398670_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_153302791.1|3398656_3398833_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931344.1|3399436_3400531_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247312.1|3400523_3401858_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_003808193.1|3401811_3402495_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003808195.1|3402520_3403684_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_004566224.1|3403680_3404682_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931346.1|3404681_3405554_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931347.1|3405550_3406300_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931348.1|3406296_3407088_-	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931349.1|3407084_3408224_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_033446332.1|3408532_3409285_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486103.1|3409318_3410101_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_010931351.1|3410104_3410494_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931352.1|3411633_3412497_+	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931353.1|3412532_3413621_+	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_010931070.1|3413617_3414568_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994566.1|3414554_3414923_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247959.1|3414921_3417900_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003818344.1|3418826_3419705_+	fatty acid desaturase	NA	NA	NA	NA	NA
WP_005013747.1|3421653_3422604_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931354.1|3422600_3423068_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_010931355.1|3423110_3423881_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_010927090.1|3423901_3424702_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931356.1|3424712_3426122_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_003814739.1|3426216_3427002_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931561.1|3427241_3428258_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814742.1|3428365_3428758_-	OsmC family protein	NA	NA	NA	NA	NA
WP_010931357.1|3428895_3429576_+	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_010931358.1|3429580_3430579_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930179.1|3430647_3431598_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814239.1|3433102_3433804_+	response regulator	NA	W8CYM9	Bacillus_phage	36.6	5.6e-32
WP_010927010.1|3433803_3435228_+	HAMP domain-containing protein	NA	NA	NA	NA	NA
WP_010931360.1|3435244_3436300_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_010931361.1|3436296_3437637_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_003820957.1|3437752_3439516_+|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
WP_010931362.1|3439627_3440506_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003814250.1|3440618_3441434_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_003814252.1|3441437_3441689_+	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_010929632.1|3441773_3442790_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 21
NZ_CP018041	Bordetella pertussis strain J306 chromosome, complete genome	4103205	3460534	3512941	4103205	transposase,tRNA	Acinetobacter_phage(37.5%)	47	NA	NA
WP_010931363.1|3460534_3461551_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010927020.1|3461646_3462357_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931368.1|3462353_3463343_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_023852728.1|3463474_3465070_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931370.1|3465072_3465810_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247745.1|3465965_3466838_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_003814298.1|3467106_3468327_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814300.1|3468323_3468983_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_003814302.1|3469054_3469687_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_010931372.1|3469716_3470235_+	flavin reductase family protein	NA	NA	NA	NA	NA
WP_010931373.1|3470245_3471355_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003814312.1|3471401_3472256_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931374.1|3472257_3473160_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3474382_3475333_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997720.1|3477089_3478079_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931375.1|3478254_3479043_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_003817833.1|3479039_3480071_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_003815390.1|3480089_3480653_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_010931376.1|3480708_3482229_-	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_010931377.1|3482492_3483197_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_003815384.1|3483204_3483942_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_003815381.1|3484047_3484422_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003815379.1|3484464_3485754_+	murein transglycosylase A	NA	NA	NA	NA	NA
WP_010931378.1|3485750_3486920_+	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_010931379.1|3486916_3487756_+	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931380.1|3487815_3488751_+	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_005012067.1|3488763_3489714_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931381.1|3489812_3490775_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_003817821.1|3490806_3491166_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931382.1|3491290_3492193_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_010931383.1|3492194_3493967_-	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_003815367.1|3494001_3494778_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_023852617.1|3496101_3497052_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003815365.1|3497903_3498224_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003815364.1|3498296_3499178_+	F0F1 ATP synthase subunit A	NA	NA	NA	NA	NA
WP_003815363.1|3499294_3499537_+	F0F1 ATP synthase subunit C	NA	NA	NA	NA	NA
WP_010931385.1|3499674_3500145_+	F0F1 ATP synthase subunit B	NA	NA	NA	NA	NA
WP_003815348.1|3500157_3500697_+	F0F1 ATP synthase subunit delta	NA	NA	NA	NA	NA
WP_010931386.1|3500731_3502273_+	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA	NA
WP_003817813.1|3502371_3503277_+	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA	NA
WP_010931387.1|3503319_3504720_+	F0F1 ATP synthase subunit beta	NA	NA	NA	NA	NA
WP_003815341.1|3504729_3505152_+	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA	NA
WP_010931388.1|3505334_3506219_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931389.1|3506294_3507371_+	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
WP_019247688.1|3507677_3509780_+	primosomal protein N'	NA	NA	NA	NA	NA
WP_010931391.1|3509822_3511892_+	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	37.3	2.6e-101
WP_005012808.1|3511990_3512941_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
NZ_CP018041	Bordetella pertussis strain J306 chromosome, complete genome	4103205	3530059	3583860	4103205	transposase,tRNA	Catovirus(11.11%)	46	NA	NA
WP_010931400.1|3530059_3531010_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486105.1|3531350_3532301_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|3532399_3533350_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443756.1|3533646_3534144_+	cupredoxin family protein	NA	NA	NA	NA	NA
WP_010931403.1|3534186_3535962_+	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
WP_076879643.1|3536008_3536836_+	copper resistance protein B	NA	NA	NA	NA	NA
WP_019249391.1|3536842_3537577_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931406.1|3538746_3539541_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815296.1|3539830_3540421_+	cysteine dioxygenase	NA	NA	NA	NA	NA
WP_010931407.1|3540454_3541783_-	amidase	NA	NA	NA	NA	NA
WP_010931408.1|3541857_3543003_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014905478.1|3543114_3544113_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446233.1|3544075_3544510_+	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
WP_010929974.1|3546026_3546911_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929973.1|3546907_3548113_-	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010929972.1|3548109_3548970_-	endonuclease	NA	NA	NA	NA	NA
WP_003807038.1|3549082_3550873_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
WP_003807035.1|3550913_3551579_-	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	6.7e-11
WP_010929971.1|3551579_3551888_-	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929970.1|3552053_3553340_-	membrane protein	NA	NA	NA	NA	NA
WP_010929969.1|3554773_3555724_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929968.1|3557675_3558890_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
WP_003815171.1|3558995_3559985_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
WP_003815172.1|3559981_3560590_+	HAD-IIIA family hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
WP_010929967.1|3560602_3561232_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_003815175.1|3561228_3561849_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_003815177.1|3561880_3562672_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
WP_003815179.1|3563514_3563979_+	PTS transporter subunit EIIA	NA	NA	NA	NA	NA
WP_010929965.1|3563997_3564924_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_010929964.1|3564977_3566264_-	cytochrome c	NA	NA	NA	NA	NA
WP_003815183.1|3567194_3568067_+	RNase adapter RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
WP_010929963.1|3568063_3569014_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
WP_005012067.1|3569112_3570063_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_020699695.1|3570167_3570398_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247263.1|3570524_3570914_-	SRPBCC family protein	NA	NA	NA	NA	NA
WP_010929962.1|3570930_3573312_-	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
WP_023853194.1|3573304_3574681_-	FAD binding domain in molybdopterin dehydrogenase	NA	A0A0P0IVM8	Acinetobacter_phage	37.3	2.4e-18
WP_010929960.1|3574696_3575692_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003819054.1|3575710_3576703_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807624.1|3576943_3577504_-	UbiX family flavin prenyltransferase	NA	NA	NA	NA	NA
WP_010929959.1|3577508_3577835_-	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA	NA
WP_010929958.1|3577871_3578684_-	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_003807618.1|3578694_3579777_-	peptide chain release factor 1	NA	A0A0S4KWG0	Pseudomonas_phage	40.7	3.3e-07
WP_010929957.1|3579863_3581138_-|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
WP_010929956.1|3581860_3582811_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|3582909_3583860_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
